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Editing gene: QRSL1 (CAeditome ID:55278)

Gene summary for QRSL1

Gene summary

Gene information	Gene symbol	QRSL1
	Gene ID	55278
	Gene name	glutaminyl-tRNA amidotransferase subunit QRSL1
	Synonyms	COXPD40\|GatA
	Cytomap	6q21
	Type of gene	protein-coding
	Description	glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrialQRSL1, glutaminyl-tRNA amidotransferase subunit Aglu-AdT subunit Aglutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1glutaminyl-tRNA synthase-like protein 1glutamyl-tRNA(Gln) amidotransf
	Modification date	20210518
	UniProtAcc	Q9H0R6
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
QRSL1	GO:0050567	Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial	19805282
QRSL1	GO:0070681	Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial	19805282
QRSL1	GO:0005739	Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial	19805282
QRSL1	GO:0030956	Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial	19805282

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RNA A-to-I events for QRSL1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000130348.10

RNA A-to-I editing events in Cancer.

CAediting_496300(106634512, +), CAediting_496301(106634513, +), CAediting_496302(106634518, +), CAediting_496303(106634576, +), CAediting_496304(106634603, +), CAediting_496305(106635597, +), CAediting_496306(106635601, +), CAediting_496307(106635603, +), CAediting_496308(106635619, +), CAediting_496309(106635620, +), CAediting_496310(106635663, +), CAediting_496311(106635672, +), CAediting_496312(106635696, +), CAediting_496313(106635697, +), CAediting_496314(106635751, +), CAediting_496315(106635764, +), CAediting_496316(106635777, +), CAediting_496317(106636593, +), CAediting_496318(106642075, +), CAediting_496319(106642076, +), CAediting_496320(106642182, +), CAediting_496321(106642185, +), CAediting_496322(106643997, +), CAediting_496323(106644530, +), CAediting_496324(106644531, +), CAediting_496325(106644582, +), CAediting_496326(106646560, +), CAediting_496327(106646983, +), CAediting_496328(106647366, +), CAediting_496329(106647378, +), CAediting_496330(106647384, +), CAediting_496331(106647429, +), CAediting_496332(106647514, +), CAediting_496333(106648110, +), CAediting_496334(106653749, +), CAediting_496335(106655389, +), CAediting_496336(106655395, +), CAediting_496337(106656680, +), CAediting_496338(106656696, +), CAediting_496339(106656736, +), CAediting_496340(106656756, +), CAediting_496341(106656757, +), CAediting_496342(106656769, +), CAediting_496343(106656799, +), CAediting_496344(106656822, +), CAediting_496345(106656895, +), CAediting_496346(106656909, +), CAediting_496347(106656918, +), CAediting_496348(106657104, +), CAediting_496349(106657737, +), CAediting_496350(106657808, +), CAediting_496351(106657822, +), CAediting_496352(106657834, +), CAediting_496353(106658433, +), CAediting_496354(106659203, +), CAediting_496355(106659318, +), CAediting_496356(106659336, +), CAediting_496357(106659344, +), CAediting_496358(106659406, +), CAediting_496359(106659409, +), CAediting_496360(106659414, +), CAediting_496361(106659415, +), CAediting_496362(106660243, +), CAediting_496363(106660273, +), CAediting_496364(106661185, +), CAediting_496365(106661231, +), CAediting_496366(106661781, +), CAediting_496367(106661786, +), CAediting_496368(106661789, +), CAediting_496369(106661829, +), CAediting_496370(106661878, +), CAediting_496371(106661894, +), CAediting_496372(106661973, +), CAediting_496373(106666031, +), CAediting_496374(106666042, +), CAediting_496375(106666050, +), CAediting_496376(106666058, +), CAediting_496377(106666059, +), CAediting_496378(106666075, +), CAediting_496379(106666080, +), CAediting_496380(106666081, +), CAediting_496381(106666104, +), CAediting_496382(106666105, +), CAediting_496383(106666114, +), CAediting_496384(106666126, +), CAediting_496385(106666135, +), CAediting_496386(106666136, +), CAediting_496387(106666147, +), CAediting_496388(106666150, +), CAediting_496389(106666152, +), CAediting_496390(106666153, +), CAediting_496391(106666154, +), CAediting_496392(106666160, +), CAediting_496393(106666161, +), CAediting_496394(106666165, +), CAediting_496395(106666169, +), CAediting_496396(106666175, +), CAediting_496397(106666185, +), CAediting_496398(106666191, +), CAediting_496399(106666201, +), CAediting_496400(106666227, +), CAediting_496401(106666232, +), CAediting_496402(106666233, +), CAediting_496403(106666240, +), CAediting_496404(106666246, +), CAediting_496405(106666300, +), CAediting_496406(106666301, +), CAediting_496407(106666304, +), CAediting_496408(106666305, +), CAediting_496409(106666337, +), CAediting_496410(106666341, +), CAediting_496411(106667979, +), CAediting_496412(106668028, +), CAediting_496413(106668029, +), CAediting_496414(106668046, +), CAediting_496415(106668055, +), CAediting_496416(106668056, +), CAediting_496417(106668063, +), CAediting_496418(106668068, +), CAediting_496419(106668069, +), CAediting_496420(106668070, +), CAediting_496421(106668077, +), CAediting_496422(106668084, +),

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RNA editing positional annotations for QRSL1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_496300	chr6_106634512_+	ncRNA_intronic
CAediting_496301	chr6_106634513_+	ncRNA_intronic
CAediting_496302	chr6_106634518_+	ncRNA_intronic
CAediting_496303	chr6_106634576_+	ncRNA_intronic
CAediting_496304	chr6_106634603_+	ncRNA_intronic
CAediting_496305	chr6_106635597_+	ncRNA_intronic
CAediting_496306	chr6_106635601_+	ncRNA_intronic
CAediting_496307	chr6_106635603_+	ncRNA_intronic
CAediting_496308	chr6_106635619_+	ncRNA_intronic
CAediting_496309	chr6_106635620_+	ncRNA_intronic
CAediting_496310	chr6_106635663_+	ncRNA_intronic
CAediting_496311	chr6_106635672_+	ncRNA_intronic
CAediting_496312	chr6_106635696_+	ncRNA_intronic
CAediting_496313	chr6_106635697_+	ncRNA_intronic
CAediting_496314	chr6_106635751_+	ncRNA_intronic
CAediting_496315	chr6_106635764_+	ncRNA_intronic
CAediting_496316	chr6_106635777_+	ncRNA_intronic
CAediting_496317	chr6_106636593_+	ncRNA_intronic
CAediting_496318	chr6_106642075_+	intronic
CAediting_496319	chr6_106642076_+	intronic
CAediting_496320	chr6_106642182_+	intronic
CAediting_496321	chr6_106642185_+	intronic
CAediting_496322	chr6_106643997_+	intronic
CAediting_496323	chr6_106644530_+	intronic
CAediting_496324	chr6_106644531_+	intronic
CAediting_496325	chr6_106644582_+	intronic
CAediting_496326	chr6_106646560_+	intronic
CAediting_496327	chr6_106646983_+	intronic
CAediting_496328	chr6_106647366_+	intronic
CAediting_496329	chr6_106647378_+	intronic
CAediting_496330	chr6_106647384_+	intronic
CAediting_496331	chr6_106647429_+	intronic
CAediting_496332	chr6_106647514_+	intronic
CAediting_496333	chr6_106648110_+	intronic
CAediting_496334	chr6_106653749_+	UTR3
CAediting_496335	chr6_106655389_+	intronic
CAediting_496336	chr6_106655395_+	intronic
CAediting_496337	chr6_106656680_+	intronic
CAediting_496338	chr6_106656696_+	intronic
CAediting_496339	chr6_106656736_+	intronic
CAediting_496340	chr6_106656756_+	intronic
CAediting_496341	chr6_106656757_+	intronic
CAediting_496342	chr6_106656769_+	intronic
CAediting_496343	chr6_106656799_+	intronic
CAediting_496344	chr6_106656822_+	intronic
CAediting_496345	chr6_106656895_+	intronic
CAediting_496346	chr6_106656909_+	intronic
CAediting_496347	chr6_106656918_+	intronic
CAediting_496348	chr6_106657104_+	intronic
CAediting_496349	chr6_106657737_+	intronic
CAediting_496350	chr6_106657808_+	intronic
CAediting_496351	chr6_106657822_+	intronic
CAediting_496352	chr6_106657834_+	intronic
CAediting_496353	chr6_106658433_+	intronic
CAediting_496354	chr6_106659203_+	intronic
CAediting_496355	chr6_106659318_+	intronic
CAediting_496356	chr6_106659336_+	intronic
CAediting_496357	chr6_106659344_+	intronic
CAediting_496358	chr6_106659406_+	intronic
CAediting_496359	chr6_106659409_+	intronic
CAediting_496360	chr6_106659414_+	intronic
CAediting_496361	chr6_106659415_+	intronic
CAediting_496362	chr6_106660243_+	intronic
CAediting_496363	chr6_106660273_+	intronic
CAediting_496364	chr6_106661185_+	intronic
CAediting_496365	chr6_106661231_+	intronic
CAediting_496366	chr6_106661781_+	intronic
CAediting_496367	chr6_106661786_+	intronic
CAediting_496368	chr6_106661789_+	intronic
CAediting_496369	chr6_106661829_+	intronic
CAediting_496370	chr6_106661878_+	intronic
CAediting_496371	chr6_106661894_+	intronic
CAediting_496372	chr6_106661973_+	intronic
CAediting_496373	chr6_106666031_+	UTR3
CAediting_496374	chr6_106666042_+	UTR3
CAediting_496375	chr6_106666050_+	UTR3
CAediting_496376	chr6_106666058_+	UTR3
CAediting_496377	chr6_106666059_+	UTR3
CAediting_496378	chr6_106666075_+	UTR3
CAediting_496379	chr6_106666080_+	UTR3
CAediting_496380	chr6_106666081_+	UTR3
CAediting_496381	chr6_106666104_+	UTR3
CAediting_496382	chr6_106666105_+	UTR3
CAediting_496383	chr6_106666114_+	UTR3
CAediting_496384	chr6_106666126_+	UTR3
CAediting_496385	chr6_106666135_+	UTR3
CAediting_496386	chr6_106666136_+	UTR3
CAediting_496387	chr6_106666147_+	UTR3
CAediting_496388	chr6_106666150_+	UTR3
CAediting_496389	chr6_106666152_+	UTR3
CAediting_496390	chr6_106666153_+	UTR3
CAediting_496391	chr6_106666154_+	UTR3
CAediting_496392	chr6_106666160_+	UTR3
CAediting_496393	chr6_106666161_+	UTR3
CAediting_496394	chr6_106666165_+	UTR3
CAediting_496395	chr6_106666169_+	UTR3
CAediting_496396	chr6_106666175_+	UTR3
CAediting_496397	chr6_106666185_+	UTR3
CAediting_496398	chr6_106666191_+	UTR3
CAediting_496399	chr6_106666201_+	UTR3
CAediting_496400	chr6_106666227_+	UTR3
CAediting_496401	chr6_106666232_+	UTR3
CAediting_496402	chr6_106666233_+	UTR3
CAediting_496403	chr6_106666240_+	UTR3
CAediting_496404	chr6_106666246_+	UTR3
CAediting_496405	chr6_106666300_+	UTR3
CAediting_496406	chr6_106666301_+	UTR3
CAediting_496407	chr6_106666304_+	UTR3
CAediting_496408	chr6_106666305_+	UTR3
CAediting_496409	chr6_106666337_+	UTR3
CAediting_496410	chr6_106666341_+	UTR3
CAediting_496411	chr6_106667979_+	UTR3
CAediting_496412	chr6_106668028_+	UTR3
CAediting_496413	chr6_106668029_+	UTR3
CAediting_496414	chr6_106668046_+	UTR3
CAediting_496415	chr6_106668055_+	UTR3
CAediting_496416	chr6_106668056_+	UTR3
CAediting_496417	chr6_106668063_+	UTR3
CAediting_496418	chr6_106668068_+	UTR3
CAediting_496419	chr6_106668069_+	UTR3
CAediting_496420	chr6_106668070_+	UTR3
CAediting_496421	chr6_106668077_+	UTR3
CAediting_496422	chr6_106668084_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_496300	chr6_106634512_+	SINE	Alu	AluJb
CAediting_496301	chr6_106634513_+	SINE	Alu	AluJb
CAediting_496302	chr6_106634518_+	SINE	Alu	AluJb
CAediting_496303	chr6_106634576_+	SINE	Alu	AluJb
CAediting_496304	chr6_106634603_+	SINE	Alu	AluJb
CAediting_496305	chr6_106635597_+	SINE	Alu	AluSg
CAediting_496306	chr6_106635601_+	SINE	Alu	AluSg
CAediting_496307	chr6_106635603_+	SINE	Alu	AluSg
CAediting_496308	chr6_106635619_+	SINE	Alu	AluSg
CAediting_496309	chr6_106635620_+	SINE	Alu	AluSg
CAediting_496310	chr6_106635663_+	SINE	Alu	AluSg
CAediting_496311	chr6_106635672_+	SINE	Alu	AluSg
CAediting_496312	chr6_106635696_+	SINE	Alu	AluSg
CAediting_496313	chr6_106635697_+	SINE	Alu	AluSg
CAediting_496314	chr6_106635751_+	SINE	Alu	AluSg
CAediting_496315	chr6_106635764_+	SINE	Alu	AluSg
CAediting_496316	chr6_106635777_+	SINE	Alu	AluSg
CAediting_496317	chr6_106636593_+	SINE	Alu	AluSc
CAediting_496318	chr6_106642075_+	SINE	Alu	AluSx
CAediting_496319	chr6_106642076_+	SINE	Alu	AluSx
CAediting_496320	chr6_106642182_+	SINE	Alu	AluSx
CAediting_496321	chr6_106642185_+	SINE	Alu	AluSx
CAediting_496322	chr6_106643997_+	SINE	Alu	AluSq2
CAediting_496323	chr6_106644530_+	SINE	Alu	AluSq2
CAediting_496324	chr6_106644531_+	SINE	Alu	AluSq2
CAediting_496325	chr6_106644582_+	SINE	Alu	AluSq2
CAediting_496326	chr6_106646560_+	SINE	Alu	FLAM_C
CAediting_496327	chr6_106646983_+	SINE	Alu	AluY
CAediting_496328	chr6_106647366_+	SINE	Alu	Alu
CAediting_496329	chr6_106647378_+	SINE	Alu	Alu
CAediting_496330	chr6_106647384_+	SINE	Alu	Alu
CAediting_496331	chr6_106647429_+	SINE	Alu	AluSx1
CAediting_496332	chr6_106647514_+	SINE	Alu	AluSx1
CAediting_496333	chr6_106648110_+	SINE	Alu	AluSc
CAediting_496334	chr6_106653749_+	SINE	Alu	AluJr
CAediting_496335	chr6_106655389_+	SINE	Alu	AluSx
CAediting_496336	chr6_106655395_+	SINE	Alu	AluSx
CAediting_496337	chr6_106656680_+	SINE	Alu	AluJo
CAediting_496338	chr6_106656696_+	SINE	Alu	AluJo
CAediting_496339	chr6_106656736_+	SINE	Alu	AluJo
CAediting_496340	chr6_106656756_+	SINE	Alu	AluJo
CAediting_496341	chr6_106656757_+	SINE	Alu	AluJo
CAediting_496342	chr6_106656769_+	SINE	Alu	AluJo
CAediting_496343	chr6_106656799_+	SINE	Alu	AluJo
CAediting_496344	chr6_106656822_+	SINE	Alu	AluJo
CAediting_496345	chr6_106656895_+	SINE	Alu	AluJo
CAediting_496346	chr6_106656909_+	SINE	Alu	AluJo
CAediting_496347	chr6_106656918_+	SINE	Alu	AluJo
CAediting_496348	chr6_106657104_+	SINE	Alu	AluSx1
CAediting_496349	chr6_106657737_+	SINE	Alu	AluSx4
CAediting_496350	chr6_106657808_+	SINE	Alu	AluSx4
CAediting_496351	chr6_106657822_+	SINE	Alu	AluSx4
CAediting_496352	chr6_106657834_+	SINE	Alu	AluSx4
CAediting_496353	chr6_106658433_+	SINE	Alu	FRAM
CAediting_496354	chr6_106659203_+	SINE	Alu	AluSz6
CAediting_496355	chr6_106659318_+	SINE	Alu	AluSz6
CAediting_496356	chr6_106659336_+	SINE	Alu	AluSz6
CAediting_496357	chr6_106659344_+	SINE	Alu	AluSz6
CAediting_496358	chr6_106659406_+	SINE	Alu	AluSz6
CAediting_496359	chr6_106659409_+	SINE	Alu	AluSz6
CAediting_496360	chr6_106659414_+	SINE	Alu	AluSz6
CAediting_496361	chr6_106659415_+	SINE	Alu	AluSz6
CAediting_496362	chr6_106660243_+	SINE	Alu	AluJb
CAediting_496363	chr6_106660273_+	SINE	Alu	AluJb
CAediting_496364	chr6_106661185_+	SINE	Alu	AluSx3
CAediting_496365	chr6_106661231_+	SINE	Alu	AluSx3
CAediting_496366	chr6_106661781_+	SINE	Alu	AluSp
CAediting_496367	chr6_106661786_+	SINE	Alu	AluSp
CAediting_496368	chr6_106661789_+	SINE	Alu	AluSp
CAediting_496369	chr6_106661829_+	SINE	Alu	AluSp
CAediting_496370	chr6_106661878_+	SINE	Alu	AluSp
CAediting_496371	chr6_106661894_+	SINE	Alu	AluSp
CAediting_496372	chr6_106661973_+	SINE	Alu	AluSp
CAediting_496374	chr6_106666042_+	SINE	Alu	AluSx1
CAediting_496375	chr6_106666050_+	SINE	Alu	AluSx1
CAediting_496376	chr6_106666058_+	SINE	Alu	AluSx1
CAediting_496377	chr6_106666059_+	SINE	Alu	AluSx1
CAediting_496378	chr6_106666075_+	SINE	Alu	AluSx1
CAediting_496379	chr6_106666080_+	SINE	Alu	AluSx1
CAediting_496380	chr6_106666081_+	SINE	Alu	AluSx1
CAediting_496381	chr6_106666104_+	SINE	Alu	AluSx1
CAediting_496382	chr6_106666105_+	SINE	Alu	AluSx1
CAediting_496383	chr6_106666114_+	SINE	Alu	AluSx1
CAediting_496384	chr6_106666126_+	SINE	Alu	AluSx1
CAediting_496385	chr6_106666135_+	SINE	Alu	AluSx1
CAediting_496386	chr6_106666136_+	SINE	Alu	AluSx1
CAediting_496387	chr6_106666147_+	SINE	Alu	AluSx1
CAediting_496388	chr6_106666150_+	SINE	Alu	AluSx1
CAediting_496389	chr6_106666152_+	SINE	Alu	AluSx1
CAediting_496390	chr6_106666153_+	SINE	Alu	AluSx1
CAediting_496391	chr6_106666154_+	SINE	Alu	AluSx1
CAediting_496392	chr6_106666160_+	SINE	Alu	AluSx1
CAediting_496393	chr6_106666161_+	SINE	Alu	AluSx1
CAediting_496394	chr6_106666165_+	SINE	Alu	AluSx1
CAediting_496395	chr6_106666169_+	SINE	Alu	AluSx1
CAediting_496396	chr6_106666175_+	SINE	Alu	AluSx1
CAediting_496397	chr6_106666185_+	SINE	Alu	AluSx1
CAediting_496398	chr6_106666191_+	SINE	Alu	AluSx1
CAediting_496399	chr6_106666201_+	SINE	Alu	AluSx1
CAediting_496400	chr6_106666227_+	SINE	Alu	AluSx1
CAediting_496401	chr6_106666232_+	SINE	Alu	AluSx1
CAediting_496402	chr6_106666233_+	SINE	Alu	AluSx1
CAediting_496403	chr6_106666240_+	SINE	Alu	AluSx1
CAediting_496404	chr6_106666246_+	SINE	Alu	AluSx1
CAediting_496405	chr6_106666300_+	SINE	Alu	AluSx1
CAediting_496406	chr6_106666301_+	SINE	Alu	AluSx1
CAediting_496407	chr6_106666304_+	SINE	Alu	AluSx1
CAediting_496408	chr6_106666305_+	SINE	Alu	AluSx1
CAediting_496409	chr6_106666337_+	SINE	Alu	AluSx1
CAediting_496410	chr6_106666341_+	SINE	Alu	AluSx1
CAediting_496411	chr6_106667979_+	SINE	Alu	AluJo
CAediting_496412	chr6_106668028_+	SINE	Alu	AluJo
CAediting_496413	chr6_106668029_+	SINE	Alu	AluJo
CAediting_496414	chr6_106668046_+	SINE	Alu	AluJo
CAediting_496415	chr6_106668055_+	SINE	Alu	AluJo
CAediting_496416	chr6_106668056_+	SINE	Alu	AluJo
CAediting_496417	chr6_106668063_+	SINE	Alu	AluJo
CAediting_496418	chr6_106668068_+	SINE	Alu	AluJo
CAediting_496419	chr6_106668069_+	SINE	Alu	AluJo
CAediting_496420	chr6_106668070_+	SINE	Alu	AluJo
CAediting_496421	chr6_106668077_+	SINE	Alu	AluJo
CAediting_496422	chr6_106668084_+	SINE	Alu	AluJo

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RNA A-to-I editing events in the alternative splicing sites for QRSL1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000130348.10.QRSL1.

Correlation between RNA A-to-I editing and PSI for ENSG00000130348.10.QRSL1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for QRSL1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for QRSL1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for QRSL1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_496376	chr6_106666058_+	ENSG00000130348.10	ENST00000369046	hsa-miR-513a-5p	106666052	106666058	7mer-m8	106666042	106666059	144.00	-17.77
CAediting_496376	chr6_106666058_+	ENSG00000130348.10	ENST00000369046	hsa-miR-513a-5p	106666052	106666058	7mer-m8	106666042	106666059	144.00	-17.77
CAediting_496376	chr6_106666058_+	ENSG00000130348.10	ENST00000369046	hsa-miR-638	106666057	106666063	7mer-1a	106666039	106666063	149.00	-29.88
CAediting_496411	chr6_106667979_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3183	106667972	106667978	7mer-m8	106667962	106667979	146.00	-18.41
CAediting_496411	chr6_106667979_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4723-3p	106667972	106667978	7mer-m8	106667957	106667979	150.00	-23.30
CAediting_496411	chr6_106667979_+	ENSG00000130348.10	ENST00000369046	hsa-miR-642a-5p	106667974	106667980	7mer-m8	106667960	106667981	145.00	-20.10
CAediting_496411	chr6_106667979_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6729-3p	106667977	106667982	6mer	106667963	106667983	147.00	-26.21
CAediting_496411	chr6_106667979_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6769b-3p	106667972	106667978	7mer-m8	106667959	106667979	151.00	-19.63
CAediting_496411	chr6_106667979_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6866-3p	106667976	106667981	6mer	106667962	106667982	154.00	-20.52
CAediting_496411	chr6_106667979_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6892-3p	106667973	106667980	8mer-1a	106667959	106667980	152.00	-17.32
CAediting_496415	chr6_106668055_+	ENSG00000130348.10	ENST00000369046	hsa-miR-326	106668050	106668056	7mer-m8	106668038	106668057	140.00	-13.25
CAediting_496415	chr6_106668055_+	ENSG00000130348.10	ENST00000369046	hsa-miR-330-5p	106668050	106668056	7mer-m8	106668034	106668057	141.00	-21.82
CAediting_496415	chr6_106668055_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4314	106668049	106668055	7mer-m8	106668038	106668056	141.00	-20.87
CAediting_496415	chr6_106668055_+	ENSG00000130348.10	ENST00000369046	hsa-miR-514a-5p	106668051	106668057	7mer-m8	106668035	106668058	150.00	-18.62
CAediting_496415	chr6_106668055_+	ENSG00000130348.10	ENST00000369046	hsa-miR-514a-5p	106668051	106668057	7mer-m8	106668035	106668058	150.00	-18.62
CAediting_496415	chr6_106668055_+	ENSG00000130348.10	ENST00000369046	hsa-miR-514a-5p	106668051	106668057	7mer-m8	106668035	106668058	150.00	-18.62
CAediting_496416	chr6_106668056_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3189-3p	106668050	106668056	7mer-m8	106668035	106668057	157.00	-25.70
CAediting_496416	chr6_106668056_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6813-3p	106668051	106668057	7mer-m8	106668038	106668058	140.00	-10.68
CAediting_496417	chr6_106668063_+	ENSG00000130348.10	ENST00000369046	hsa-miR-7977	106668058	106668064	7mer-m8	106668048	106668065	140.00	-13.07
CAediting_496418	chr6_106668068_+	ENSG00000130348.10	ENST00000369046	hsa-miR-676-5p	106668065	106668071	7mer-1a	106668051	106668071	150.00	-23.10
CAediting_496373	chr6_106666031_+	ENSG00000130348.10	ENST00000369046	hsa-miR-186-3p	106666027	106666032	6mer	106666010	106666033	155.00	-19.15
CAediting_496373	chr6_106666031_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4690-3p	106666029	106666035	7mer-m8	106666018	106666036	143.00	-15.61
CAediting_496373	chr6_106666031_+	ENSG00000130348.10	ENST00000369046	hsa-miR-5685	106666029	106666035	7mer-m8	106666015	106666036	164.00	-21.22
CAediting_496375	chr6_106666050_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4466	106666048	106666053	6mer	106666037	106666054	140.00	-26.33
CAediting_496380	chr6_106666081_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3176	106666074	106666080	7mer-m8	106666063	106666081	140.00	-15.24
CAediting_496380	chr6_106666081_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3922-3p	106666074	106666080	7mer-m8	106666060	106666081	141.00	-19.73
CAediting_496380	chr6_106666081_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6726-3p	106666079	106666085	7mer-m8	106666066	106666086	163.00	-35.49
CAediting_496381	chr6_106666104_+	ENSG00000130348.10	ENST00000369046	hsa-miR-378a-5p	106666098	106666104	7mer-m8	106666083	106666105	160.00	-28.33
CAediting_496382	chr6_106666105_+	ENSG00000130348.10	ENST00000369046	hsa-miR-301a-5p	106666098	106666104	7mer-m8	106666082	106666105	158.00	-19.42
CAediting_496382	chr6_106666105_+	ENSG00000130348.10	ENST00000369046	hsa-miR-301b-5p	106666098	106666104	7mer-m8	106666082	106666105	142.00	-14.75
CAediting_496382	chr6_106666105_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6780a-3p	106666100	106666106	7mer-m8	106666085	106666107	153.00	-17.76
CAediting_496383	chr6_106666114_+	ENSG00000130348.10	ENST00000369046	hsa-miR-1301-5p	106666108	106666115	8mer-1a	106666097	106666115	141.00	-11.89
CAediting_496383	chr6_106666114_+	ENSG00000130348.10	ENST00000369046	hsa-miR-517-5p	106666107	106666113	7mer-m8	106666093	106666114	145.00	-13.36
CAediting_496383	chr6_106666114_+	ENSG00000130348.10	ENST00000369046	hsa-miR-517-5p	106666107	106666113	7mer-m8	106666093	106666114	145.00	-13.36
CAediting_496383	chr6_106666114_+	ENSG00000130348.10	ENST00000369046	hsa-miR-517-5p	106666107	106666113	7mer-m8	106666093	106666114	145.00	-13.36
CAediting_496383	chr6_106666114_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6502-5p	106666108	106666115	8mer-1a	106666094	106666115	145.00	-20.45
CAediting_496383	chr6_106666114_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6762-3p	106666112	106666118	7mer-m8	106666100	106666119	153.00	-18.75
CAediting_496384	chr6_106666126_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4728-3p	106666122	106666128	7mer-m8	106666105	106666129	151.00	-22.21
CAediting_496384	chr6_106666126_+	ENSG00000130348.10	ENST00000369046	hsa-miR-628-5p	106666121	106666127	7mer-m8	106666105	106666128	154.00	-17.63
CAediting_496384	chr6_106666126_+	ENSG00000130348.10	ENST00000369046	hsa-miR-9718	106666121	106666127	7mer-m8	106666109	106666128	161.00	-22.17
CAediting_496386	chr6_106666136_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4508	106666134	106666140	7mer-m8	106666125	106666141	140.00	-21.85
CAediting_496386	chr6_106666136_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6754-3p	106666129	106666135	7mer-m8	106666112	106666136	142.00	-17.21
CAediting_496386	chr6_106666136_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6837-3p	106666130	106666135	6mer	106666111	106666136	143.00	-21.62
CAediting_496387	chr6_106666147_+	ENSG00000130348.10	ENST00000369046	hsa-miR-374b-3p	106666144	106666151	8mer-1a	106666129	106666151	147.00	-12.57
CAediting_496388	chr6_106666150_+	ENSG00000130348.10	ENST00000369046	hsa-miR-222-5p	106666144	106666151	8mer-1a	106666130	106666151	140.00	-9.13
CAediting_496388	chr6_106666150_+	ENSG00000130348.10	ENST00000369046	hsa-miR-30a-3p	106666146	106666153	8mer-1a	106666129	106666153	150.00	-12.52
CAediting_496388	chr6_106666150_+	ENSG00000130348.10	ENST00000369046	hsa-miR-30d-3p	106666146	106666153	8mer-1a	106666131	106666153	149.00	-12.11
CAediting_496388	chr6_106666150_+	ENSG00000130348.10	ENST00000369046	hsa-miR-30e-3p	106666146	106666153	8mer-1a	106666129	106666153	150.00	-14.55
CAediting_496388	chr6_106666150_+	ENSG00000130348.10	ENST00000369046	hsa-miR-936	106666143	106666150	8mer-1a	106666128	106666150	159.00	-22.47
CAediting_496389	chr6_106666152_+	ENSG00000130348.10	ENST00000369046	hsa-miR-630	106666150	106666157	8mer-1a	106666137	106666157	158.00	-15.14
CAediting_496392	chr6_106666160_+	ENSG00000130348.10	ENST00000369046	hsa-miR-578	106666155	106666161	7mer-m8	106666142	106666162	148.00	-9.14
CAediting_496392	chr6_106666160_+	ENSG00000130348.10	ENST00000369046	hsa-miR-643	106666153	106666160	8mer-1a	106666138	106666160	143.00	-11.13
CAediting_496393	chr6_106666161_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6844	106666155	106666161	7mer-m8	106666141	106666162	155.00	-7.49
CAediting_496394	chr6_106666165_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3190-5p	106666163	106666169	7mer-m8	106666151	106666170	143.00	-16.24
CAediting_496394	chr6_106666165_+	ENSG00000130348.10	ENST00000369046	hsa-miR-548s	106666162	106666168	7mer-m8	106666147	106666169	145.00	-11.19
CAediting_496395	chr6_106666169_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3940-3p	106666166	106666172	7mer-m8	106666152	106666173	142.00	-15.48
CAediting_496397	chr6_106666185_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6786-3p	106666180	106666186	7mer-m8	106666164	106666187	163.00	-25.80
CAediting_496398	chr6_106666191_+	ENSG00000130348.10	ENST00000369046	hsa-miR-140-3p	106666186	106666192	7mer-m8	106666173	106666193	143.00	-19.72
CAediting_496398	chr6_106666191_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3619-3p	106666189	106666194	6mer	106666173	106666195	143.00	-29.44
CAediting_496399	chr6_106666201_+	ENSG00000130348.10	ENST00000369046	hsa-miR-1207-3p	106666194	106666200	7mer-m8	106666183	106666201	145.00	-13.53
CAediting_496399	chr6_106666201_+	ENSG00000130348.10	ENST00000369046	hsa-miR-646	106666196	106666202	7mer-m8	106666184	106666203	148.00	-17.86
CAediting_496402	chr6_106666233_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4437	106666229	106666235	7mer-m8	106666216	106666236	146.00	-17.42
CAediting_496402	chr6_106666233_+	ENSG00000130348.10	ENST00000369046	hsa-miR-5088-5p	106666230	106666236	7mer-m8	106666213	106666237	162.00	-27.50
CAediting_496404	chr6_106666246_+	ENSG00000130348.10	ENST00000369046	hsa-miR-1224-3p	106666239	106666245	7mer-m8	106666226	106666246	150.00	-25.71
CAediting_496405	chr6_106666300_+	ENSG00000130348.10	ENST00000369046	hsa-miR-5691	106666297	106666304	8mer-1a	106666284	106666304	147.00	-19.02
CAediting_496405	chr6_106666300_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6773-3p	106666293	106666300	8mer-1a	106666279	106666300	142.00	-15.63
CAediting_496405	chr6_106666300_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6805-3p	106666297	106666304	8mer-1a	106666282	106666304	154.00	-21.46
CAediting_496406	chr6_106666301_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4312	106666296	106666303	8mer-1a	106666285	106666303	144.00	-15.64
CAediting_496407	chr6_106666304_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4790-5p	106666298	106666304	7mer-m8	106666286	106666305	158.00	-16.75
CAediting_496408	chr6_106666305_+	ENSG00000130348.10	ENST00000369046	hsa-miR-1910-5p	106666303	106666309	7mer-m8	106666291	106666310	149.00	-23.27
CAediting_496408	chr6_106666305_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6838-3p	106666302	106666308	7mer-m8	106666291	106666309	168.00	-21.27
CAediting_496410	chr6_106666341_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4482-3p	106666336	106666342	7mer-m8	106666322	106666343	145.00	-7.24
CAediting_496413	chr6_106668029_+	ENSG00000130348.10	ENST00000369046	hsa-miR-1199-5p	106668022	106668028	7mer-m8	106668010	106668029	156.00	-28.57
CAediting_496413	chr6_106668029_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3622a-3p	106668025	106668032	8mer-1a	106668011	106668032	148.00	-19.86
CAediting_496413	chr6_106668029_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3622b-3p	106668025	106668032	8mer-1a	106668012	106668032	157.00	-24.67
CAediting_496413	chr6_106668029_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6751-3p	106668022	106668028	7mer-m8	106668009	106668029	141.00	-13.15
CAediting_496421	chr6_106668077_+	ENSG00000130348.10	ENST00000369046	hsa-miR-662	106668071	106668077	7mer-m8	106668056	106668078	153.00	-23.85
CAediting_496421	chr6_106668077_+	ENSG00000130348.10	ENST00000369046	hsa-miR-663b	106668075	106668081	7mer-m8	106668063	106668082	145.00	-23.10
CAediting_496422	chr6_106668084_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4466	106668081	106668087	7mer-m8	106668069	106668088	142.00	-20.77
CAediting_496422	chr6_106668084_+	ENSG00000130348.10	ENST00000369046	hsa-miR-675-5p	106668081	106668087	7mer-m8	106668069	106668088	147.00	-24.87
CAediting_496385	chr6_106666135_+	ENSG00000130348.10	ENST00000369046	hsa-miR-1229-3p	106666129	106666135	7mer-m8	106666112	106666136	146.00	-15.18
CAediting_496385	chr6_106666135_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6511a-3p	106666128	106666135	8mer-1a	106666114	106666135	145.00	-16.31
CAediting_496385	chr6_106666135_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6511a-3p	106666128	106666135	8mer-1a	106666114	106666135	145.00	-16.31
CAediting_496385	chr6_106666135_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6511a-3p	106666128	106666135	8mer-1a	106666114	106666135	145.00	-16.31
CAediting_496385	chr6_106666135_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6511a-3p	106666128	106666135	8mer-1a	106666114	106666135	145.00	-16.31
CAediting_496385	chr6_106666135_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6511b-3p	106666128	106666135	8mer-1a	106666113	106666135	140.00	-16.62
CAediting_496385	chr6_106666135_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6511b-3p	106666128	106666135	8mer-1a	106666113	106666135	140.00	-16.62
CAediting_496403	chr6_106666240_+	ENSG00000130348.10	ENST00000369046	hsa-miR-1915-3p	106666233	106666239	7mer-m8	106666221	106666240	140.00	-23.18
CAediting_496403	chr6_106666240_+	ENSG00000130348.10	ENST00000369046	hsa-miR-361-3p	106666235	106666241	7mer-m8	106666215	106666242	160.00	-29.85
CAediting_496403	chr6_106666240_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6764-5p	106666233	106666239	7mer-m8	106666218	106666240	151.00	-21.03

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_496376	chr6_106666058_+	ENSG00000130348.10	ENST00000369046	hsa-miR-10399-5p	106666053	106666059	7mer-m8	106666039	106666060	148	-10
CAediting_496377	chr6_106666059_+	ENSG00000130348.10	ENST00000369046	hsa-miR-10399-5p	106666053	106666059	7mer-m8	106666039	106666060	148	-10
CAediting_496381	chr6_106666104_+	ENSG00000130348.10	ENST00000369046	hsa-miR-11181-5p	106666097	106666104	8mer-1a	106666085	106666104	144	-17.89
CAediting_496403	chr6_106666240_+	ENSG00000130348.10	ENST00000369046	hsa-miR-1306-5p	106666237	106666243	7mer-m8	106666223	106666244	140	-17.81
CAediting_496378	chr6_106666075_+	ENSG00000130348.10	ENST00000369046	hsa-miR-150-5p	106666069	106666075	7mer-m8	106666055	106666076	140	-15.8
CAediting_496385	chr6_106666135_+	ENSG00000130348.10	ENST00000369046	hsa-miR-193b-5p	106666133	106666139	7mer-m8	106666119	106666140	142	-18.13
CAediting_496386	chr6_106666136_+	ENSG00000130348.10	ENST00000369046	hsa-miR-193b-5p	106666133	106666139	7mer-m8	106666119	106666140	142	-18.13
CAediting_496417	chr6_106668063_+	ENSG00000130348.10	ENST00000369046	hsa-miR-216a-5p	106668060	106668067	8mer-1a	106668046	106668067	150	-16.7
CAediting_496383	chr6_106666114_+	ENSG00000130348.10	ENST00000369046	hsa-miR-26b-3p	106666110	106666116	7mer-m8	106666097	106666117	151	-15.28
CAediting_496394	chr6_106666165_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3064-5p	106666164	106666169	6mer	106666149	106666170	140	-17.25
CAediting_496395	chr6_106666169_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3064-5p	106666164	106666169	6mer	106666149	106666170	140	-17.25
CAediting_496374	chr6_106666042_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3130-3p	106666036	106666042	7mer-m8	106666024	106666043	148	-18.17
CAediting_496374	chr6_106666042_+	ENSG00000130348.10	ENST00000369046	hsa-miR-3130-3p	106666036	106666042	7mer-m8	106666024	106666043	148	-18.17
CAediting_496396	chr6_106666175_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4252	106666174	106666179	6mer	106666162	106666180	142	-19.82
CAediting_496374	chr6_106666042_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4252	106666040	106666046	7mer-m8	106666028	106666047	154	-22.96
CAediting_496421	chr6_106668077_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4284	106668073	106668080	8mer-1a	106668063	106668080	147	-14.92
CAediting_496407	chr6_106666304_+	ENSG00000130348.10	ENST00000369046	hsa-miR-431-5p	106666301	106666307	7mer-m8	106666288	106666308	140	-16.67
CAediting_496408	chr6_106666305_+	ENSG00000130348.10	ENST00000369046	hsa-miR-431-5p	106666301	106666307	7mer-m8	106666288	106666308	140	-16.67
CAediting_496414	chr6_106668046_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4478	106668043	106668049	7mer-m8	106668035	106668050	153	-25.52
CAediting_496383	chr6_106666114_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4687-3p	106666112	106666118	7mer-m8	106666099	106666119	145	-15.21
CAediting_496384	chr6_106666126_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4716-5p	106666124	106666130	7mer-m8	106666110	106666131	140	-13.17
CAediting_496393	chr6_106666161_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4735-5p	106666159	106666165	7mer-m8	106666145	106666166	140	-5.48
CAediting_496394	chr6_106666165_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4735-5p	106666159	106666165	7mer-m8	106666145	106666166	140	-5.48
CAediting_496381	chr6_106666104_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4762-3p	106666099	106666104	6mer	106666082	106666105	141	-22.37
CAediting_496382	chr6_106666105_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4762-3p	106666099	106666104	6mer	106666082	106666105	141	-22.37
CAediting_496394	chr6_106666165_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4794	106666163	106666169	7mer-m8	106666149	106666170	140	-12.3
CAediting_496395	chr6_106666169_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4794	106666163	106666169	7mer-m8	106666149	106666170	140	-12.3
CAediting_496414	chr6_106668046_+	ENSG00000130348.10	ENST00000369046	hsa-miR-485-5p	106668044	106668050	7mer-m8	106668030	106668051	148	-14.47
CAediting_496374	chr6_106666042_+	ENSG00000130348.10	ENST00000369046	hsa-miR-500a-3p	106666036	106666041	6mer	106666021	106666042	148	-17.09
CAediting_496377	chr6_106666059_+	ENSG00000130348.10	ENST00000369046	hsa-miR-5089-5p	106666057	106666063	7mer-m8	106666042	106666064	148	-13.62
CAediting_496397	chr6_106666185_+	ENSG00000130348.10	ENST00000369046	hsa-miR-5683	106666183	106666190	8mer-1a	106666166	106666190	149	-19.63
CAediting_496376	chr6_106666058_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6504-3p	106666053	106666059	7mer-m8	106666039	106666060	149	-15.11
CAediting_496377	chr6_106666059_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6504-3p	106666053	106666059	7mer-m8	106666039	106666060	149	-15.11
CAediting_496394	chr6_106666165_+	ENSG00000130348.10	ENST00000369046	hsa-miR-664a-5p	106666163	106666169	7mer-m8	106666147	106666170	141	-13.02
CAediting_496395	chr6_106666169_+	ENSG00000130348.10	ENST00000369046	hsa-miR-664a-5p	106666163	106666169	7mer-m8	106666147	106666170	141	-13.02
CAediting_496378	chr6_106666075_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6778-3p	106666071	106666077	7mer-m8	106666058	106666078	143	-13.97
CAediting_496374	chr6_106666042_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6807-3p	106666038	106666043	6mer	106666023	106666044	140	-23.41
CAediting_496375	chr6_106666050_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6807-5p	106666043	106666049	7mer-m8	106666029	106666050	149	-20.18
CAediting_496402	chr6_106666233_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6823-5p	106666231	106666237	7mer-m8	106666219	106666238	152	-19.41
CAediting_496387	chr6_106666147_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6832-5p	106666141	106666147	7mer-m8	106666126	106666148	142	-16.66
CAediting_496414	chr6_106668046_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6834-5p	106668039	106668045	7mer-m8	106668026	106668046	148	-15.26
CAediting_496399	chr6_106666201_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6869-5p	106666198	106666204	7mer-m8	106666182	106666205	152	-20.41
CAediting_496378	chr6_106666075_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6878-3p	106666073	106666080	8mer-1a	106666060	106666080	142	-14.14
CAediting_496379	chr6_106666080_+	ENSG00000130348.10	ENST00000369046	hsa-miR-6878-3p	106666073	106666080	8mer-1a	106666060	106666080	142	-14.14
CAediting_496414	chr6_106668046_+	ENSG00000130348.10	ENST00000369046	hsa-miR-7160-5p	106668041	106668047	7mer-m8	106668030	106668048	142	-17.53
CAediting_496398	chr6_106666191_+	ENSG00000130348.10	ENST00000369046	hsa-miR-8052	106666190	106666196	7mer-1a	106666175	106666196	144	-23.11
CAediting_496400	chr6_106666227_+	ENSG00000130348.10	ENST00000369046	hsa-miR-8062	106666222	106666228	7mer-m8	106666209	106666229	141	-10.43
CAediting_496415	chr6_106668055_+	ENSG00000130348.10	ENST00000369046	hsa-miR-887-5p	106668048	106668055	8mer-1a	106668036	106668055	144	-13.53
CAediting_496334	chr6_106653749_+	ENSG00000130348.10	ENST00000369044	hsa-miR-378a-3p	106653743	106653749	7mer-m8	106653727	106653750	146	-16.62
CAediting_496334	chr6_106653749_+	ENSG00000130348.10	ENST00000369044	hsa-miR-378b	106653743	106653749	7mer-m8	106653734	106653750	150	-18.32
CAediting_496334	chr6_106653749_+	ENSG00000130348.10	ENST00000369044	hsa-miR-378c	106653743	106653749	7mer-m8	106653724	106653750	146	-16.62
CAediting_496334	chr6_106653749_+	ENSG00000130348.10	ENST00000369044	hsa-miR-378d	106653743	106653749	7mer-m8	106653729	106653750	146	-16.62
CAediting_496334	chr6_106653749_+	ENSG00000130348.10	ENST00000369044	hsa-miR-378d	106653743	106653749	7mer-m8	106653729	106653750	146	-16.62
CAediting_496334	chr6_106653749_+	ENSG00000130348.10	ENST00000369044	hsa-miR-378e	106653743	106653749	7mer-m8	106653730	106653750	146	-16.73
CAediting_496334	chr6_106653749_+	ENSG00000130348.10	ENST00000369044	hsa-miR-378f	106653743	106653749	7mer-m8	106653732	106653750	150	-14.47
CAediting_496334	chr6_106653749_+	ENSG00000130348.10	ENST00000369044	hsa-miR-378h	106653743	106653749	7mer-m8	106653730	106653750	143	-13.81
CAediting_496334	chr6_106653749_+	ENSG00000130348.10	ENST00000369044	hsa-miR-378i	106653743	106653749	7mer-m8	106653728	106653750	150	-17.84
CAediting_496334	chr6_106653749_+	ENSG00000130348.10	ENST00000369044	hsa-miR-422a	106653743	106653749	7mer-m8	106653729	106653750	152	-18.61
CAediting_496334	chr6_106653749_+	ENSG00000130348.10	ENST00000369044	hsa-miR-660-3p	106653747	106653753	7mer-m8	106653734	106653754	150	-17.53

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000130348.10	ENST00000369046	hsa-miR-200b-3p	106666477	106666483	7mer-m8	106666462	106666484	155	-10.27
CAediting_688080	chr9_63819626_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4477b	106666537	106666544	8mer-1a	106666523	106666544	149	-14.41
CAediting_688081	chr9_63819627_+	ENSG00000130348.10	ENST00000369046	hsa-miR-4477b	106666909	106666915	7mer-m8	106666895	106666916	147	-8.89
CAediting_688081	chr9_63819627_+	ENSG00000130348.10	ENST00000369044	hsa-miR-4477b	106653026	106653032	7mer-m8	106653012	106653033	140	-13.89
CAediting_1229413	chr17_67471544_+	ENSG00000130348.10	ENST00000369046	hsa-miR-548aa	106667267	106667273	7mer-m8	106667250	106667274	140	-9.72
CAediting_1229414	chr17_67471546_+	ENSG00000130348.10	ENST00000369046	hsa-miR-548aa	106666378	106666384	7mer-m8	106666362	106666385	149	-12.67
CAediting_1351755	chr19_40282625_-	ENSG00000130348.10	ENST00000369046	hsa-miR-641	106666310	106666316	7mer-1a	106666290	106666316	145	-24.21
CAediting_228905	chr2_188297554_+	ENSG00000130348.10	ENST00000369046	hsa-miR-561-3p	106668391	106668398	8mer-1a	106668378	106668398	153	-11.75
CAediting_1306323	chr19_13836462_-	ENSG00000130348.10	ENST00000369044	hsa-miR-27a-3p	106653763	106653768	6mer	106653747	106653769	145	-22.7
CAediting_1351755	chr19_40282625_-	ENSG00000130348.10	ENST00000369044	hsa-miR-641	106653440	106653445	6mer	106653423	106653446	147	-20.34
CAediting_86358	chr1_109598906_+	ENSG00000130348.10	ENST00000369044	hsa-miR-197-5p	106653790	106653796	7mer-m8	106653777	106653797	164	-31.06

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000130348.10	ENST00000369046	hsa-miR-200b-3p	106668134	106668140	7mer-m8	106668121	106668141	154	-9.37
CAediting_1351755	chr19_40282625_-	ENSG00000130348.10	ENST00000369046	hsa-miR-641	106667420	106667425	6mer	106667402	106667426	147	-15.73
CAediting_1399425	chr20_1392958_-	ENSG00000130348.10	ENST00000369046	hsa-miR-6869-5p	106666198	106666204	7mer-m8	106666182	106666205	152	-20.41
CAediting_86358	chr1_109598906_+	ENSG00000130348.10	ENST00000369044	hsa-miR-197-5p	106653362	106653368	7mer-m8	106653349	106653369	152	-26.31
CAediting_117844	chr1_162342605_+	ENSG00000130348.10	ENST00000369044	hsa-miR-556-3p	106653532	106653538	7mer-m8	106653519	106653539	147	-10.22

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for QRSL1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000369044.1	protein_coding
ENST00000369046.7	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_496334	ENST00000369044.1	chr6_106653749_+	-597.90	-598.60	-597.90
CAediting_496373	ENST00000369046.7	chr6_106666031_+	-1145.60	-1144.60	-1203.10
CAediting_496374	ENST00000369046.7	chr6_106666042_+	-1149.30	-1144.60	-1203.10
CAediting_496375	ENST00000369046.7	chr6_106666050_+	-1144.20	-1144.60	-1203.10
CAediting_496376	ENST00000369046.7	chr6_106666058_+	-1144.70	-1144.60	-1203.10
CAediting_496377	ENST00000369046.7	chr6_106666059_+	-1144.60	-1144.60	-1203.10
CAediting_496378	ENST00000369046.7	chr6_106666075_+	-1143.70	-1144.60	-1203.10
CAediting_496379	ENST00000369046.7	chr6_106666080_+	-1148.00	-1144.60	-1203.10
CAediting_496380	ENST00000369046.7	chr6_106666081_+	-1145.70	-1144.60	-1203.10
CAediting_496381	ENST00000369046.7	chr6_106666104_+	-1151.50	-1144.60	-1203.10
CAediting_496382	ENST00000369046.7	chr6_106666105_+	-1144.70	-1144.60	-1203.10
CAediting_496383	ENST00000369046.7	chr6_106666114_+	-1145.80	-1144.60	-1203.10
CAediting_496384	ENST00000369046.7	chr6_106666126_+	-1144.60	-1144.60	-1203.10
CAediting_496385	ENST00000369046.7	chr6_106666135_+	-1150.60	-1144.60	-1203.10
CAediting_496386	ENST00000369046.7	chr6_106666136_+	-1146.10	-1144.60	-1203.10
CAediting_496387	ENST00000369046.7	chr6_106666147_+	-1144.60	-1144.60	-1203.10
CAediting_496388	ENST00000369046.7	chr6_106666150_+	-1144.70	-1144.60	-1203.10
CAediting_496389	ENST00000369046.7	chr6_106666152_+	-1144.60	-1144.60	-1203.10
CAediting_496390	ENST00000369046.7	chr6_106666153_+	-1144.60	-1144.60	-1203.10
CAediting_496391	ENST00000369046.7	chr6_106666154_+	-1144.60	-1144.60	-1203.10
CAediting_496392	ENST00000369046.7	chr6_106666160_+	-1144.60	-1144.60	-1203.10
CAediting_496393	ENST00000369046.7	chr6_106666161_+	-1144.60	-1144.60	-1203.10
CAediting_496394	ENST00000369046.7	chr6_106666165_+	-1144.80	-1144.60	-1203.10
CAediting_496395	ENST00000369046.7	chr6_106666169_+	-1144.60	-1144.60	-1203.10
CAediting_496396	ENST00000369046.7	chr6_106666175_+	-1144.60	-1144.60	-1203.10
CAediting_496397	ENST00000369046.7	chr6_106666185_+	-1143.90	-1144.60	-1203.10
CAediting_496398	ENST00000369046.7	chr6_106666191_+	-1144.30	-1144.60	-1203.10
CAediting_496399	ENST00000369046.7	chr6_106666201_+	-1144.60	-1144.60	-1203.10
CAediting_496400	ENST00000369046.7	chr6_106666227_+	-1144.50	-1144.60	-1203.10
CAediting_496401	ENST00000369046.7	chr6_106666232_+	-1147.00	-1144.60	-1203.10
CAediting_496402	ENST00000369046.7	chr6_106666233_+	-1147.30	-1144.60	-1203.10
CAediting_496403	ENST00000369046.7	chr6_106666240_+	-1147.30	-1144.60	-1203.10
CAediting_496404	ENST00000369046.7	chr6_106666246_+	-1144.60	-1144.60	-1203.10
CAediting_496405	ENST00000369046.7	chr6_106666300_+	-1148.30	-1144.60	-1203.10
CAediting_496406	ENST00000369046.7	chr6_106666301_+	-1146.90	-1144.60	-1203.10
CAediting_496407	ENST00000369046.7	chr6_106666304_+	-1144.30	-1144.60	-1203.10
CAediting_496408	ENST00000369046.7	chr6_106666305_+	-1144.30	-1144.60	-1203.10
CAediting_496409	ENST00000369046.7	chr6_106666337_+	-1145.10	-1144.60	-1203.10
CAediting_496410	ENST00000369046.7	chr6_106666341_+	-1145.80	-1144.60	-1203.10
CAediting_496411	ENST00000369046.7	chr6_106667979_+	-1143.70	-1144.60	-1203.10
CAediting_496412	ENST00000369046.7	chr6_106668028_+	-1144.40	-1144.60	-1203.10
CAediting_496413	ENST00000369046.7	chr6_106668029_+	-1144.60	-1144.60	-1203.10
CAediting_496414	ENST00000369046.7	chr6_106668046_+	-1148.20	-1144.60	-1203.10
CAediting_496415	ENST00000369046.7	chr6_106668055_+	-1144.70	-1144.60	-1203.10
CAediting_496416	ENST00000369046.7	chr6_106668056_+	-1144.30	-1144.60	-1203.10
CAediting_496417	ENST00000369046.7	chr6_106668063_+	-1151.50	-1144.60	-1203.10
CAediting_496418	ENST00000369046.7	chr6_106668068_+	-1144.30	-1144.60	-1203.10
CAediting_496419	ENST00000369046.7	chr6_106668069_+	-1147.20	-1144.60	-1203.10
CAediting_496420	ENST00000369046.7	chr6_106668070_+	-1145.10	-1144.60	-1203.10
CAediting_496421	ENST00000369046.7	chr6_106668077_+	-1143.70	-1144.60	-1203.10
CAediting_496422	ENST00000369046.7	chr6_106668084_+	-1148.50	-1144.60	-1203.10

Top

Relation with ADAR for QRSL1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_496411	chr6_106667979_+	0.0371447124656153	0.233461110992647	.	.	.	.
BRCA	CAediting_496414	chr6_106668046_+	0.000170519288257246	0.277378773777593	.	.	.	.
STAD	CAediting_496414	chr6_106668046_+	0.0240726770032847	0.267581249517479	.	.	.	.
LGG	CAediting_496416	chr6_106668056_+	0.000608431445129409	0.25171803438582	.	.	.	.
BRCA	CAediting_496416	chr6_106668056_+	1.70720999933472e-17	0.354813097228552	.	.	.	.
LIHC	CAediting_496416	chr6_106668056_+	9.09548346331315e-05	0.300788840085607	.	.	.	.
CESC	CAediting_496416	chr6_106668056_+	0.000402176881830925	0.311714405264139	.	.	.	.
LUAD	CAediting_496416	chr6_106668056_+	0.0250933523598158	0.226230942153402	.	.	.	.
COAD	CAediting_496416	chr6_106668056_+	0.00775100973045811	0.271629308390537	0.0141492442744311	0.250998056707952	.	.
LUSC	CAediting_496416	chr6_106668056_+	0.000949628731504249	0.335443506767129	.	.	0.0276047512552216	0.227266330730936
GBM	CAediting_496416	chr6_106668056_+	0.0212411793147783	0.325105722415285	0.025203742084644	0.316361575066309	.	.
PRAD	CAediting_496416	chr6_106668056_+	4.97137536418366e-05	0.334728942364459	.	.	.	.
STAD	CAediting_496416	chr6_106668056_+	0.000926524341383506	0.249613540469063	.	.	.	.
THCA	CAediting_496416	chr6_106668056_+	4.36468029165767e-05	0.243419225407348	.	.	.	.
KIRC	CAediting_496416	chr6_106668056_+	0.000968087788715294	0.218050853045099	.	.	.	.
UCEC	CAediting_496416	chr6_106668056_+	1.31296298988818e-06	0.413958694796007	.	.	.	.
PCPG	CAediting_496416	chr6_106668056_+	0.0017992380547594	0.397972130160414	.	.	.	.
SKCM	CAediting_496416	chr6_106668056_+	0.000250497988919418	0.35505554628343	.	.	.	.
SARC	CAediting_496416	chr6_106668056_+	0.0181601577252971	0.238241861191568	.	.	.	.
THYM	CAediting_496416	chr6_106668056_+	6.46999073409115e-07	0.622497463800833	.	.	0.000826005623257223	0.445624741032648
BRCA	CAediting_496418	chr6_106668068_+	0.00319828001801865	0.228887521600308	.	.	.	.
THCA	CAediting_496418	chr6_106668068_+	0.0102922265943067	0.318605608510466	.	.	.	.

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Relation with cancer stages for QRSL1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
KIRC	pathologic_stage	CAediting_496416	chr6_106668056_+	0.0491661773865864	0.131306184311766

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Relation with survival for QRSL1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for QRSL1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for QRSL1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
QRSL1	C3532239	Mitochondrial cardiomyopathy	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene