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Editing gene: RFWD3 (CAeditome ID:55159)

Gene summary for RFWD3

Gene summary

Gene information	Gene symbol	RFWD3
	Gene ID	55159
	Gene name	ring finger and WD repeat domain 3
	Synonyms	FANCW\|RNF201
	Cytomap	16q23.1
	Type of gene	protein-coding
	Description	E3 ubiquitin-protein ligase RFWD3RING finger and WD repeat domain-containing protein 3RING finger protein 201RING-type E3 ubiquitin transferase RFWD3
	Modification date	20210518
	UniProtAcc	Q6PCD5
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
RFWD3	GO:0035861	E3 ubiquitin-protein ligase RFWD3	21504906
RFWD3	GO:0061630	E3 ubiquitin-protein ligase RFWD3	20173098
RFWD3	GO:0061630	E3 ubiquitin-protein ligase RFWD3	26474068
RFWD3	GO:0061630	E3 ubiquitin-protein ligase RFWD3	28575657
RFWD3	GO:0061630	E3 ubiquitin-protein ligase RFWD3	28575658
RFWD3	GO:0000724	E3 ubiquitin-protein ligase RFWD3	26474068
RFWD3	GO:0000724	E3 ubiquitin-protein ligase RFWD3	28575657
RFWD3	GO:0000724	E3 ubiquitin-protein ligase RFWD3	28575658
RFWD3	GO:0006974	E3 ubiquitin-protein ligase RFWD3	26474068
RFWD3	GO:0006974	E3 ubiquitin-protein ligase RFWD3	28575657
RFWD3	GO:0006974	E3 ubiquitin-protein ligase RFWD3	28575658
RFWD3	GO:0010212	E3 ubiquitin-protein ligase RFWD3	20173098
RFWD3	GO:0016567	E3 ubiquitin-protein ligase RFWD3	20173098
RFWD3	GO:0016567	E3 ubiquitin-protein ligase RFWD3	26474068
RFWD3	GO:0016567	E3 ubiquitin-protein ligase RFWD3	28575657
RFWD3	GO:0016567	E3 ubiquitin-protein ligase RFWD3	28575658
RFWD3	GO:0031297	E3 ubiquitin-protein ligase RFWD3	26474068
RFWD3	GO:0005634	E3 ubiquitin-protein ligase RFWD3	20173098
RFWD3	GO:0005654	E3 ubiquitin-protein ligase RFWD3	0000052
RFWD3	GO:0090734	E3 ubiquitin-protein ligase RFWD3	28575657
RFWD3	GO:0090734	E3 ubiquitin-protein ligase RFWD3	28575658

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RNA A-to-I events for RFWD3

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000168411.12

RNA A-to-I editing events in Cancer.

CAediting_1133715(74621716, -), CAediting_1133716(74621723, -), CAediting_1133717(74621731, -), CAediting_1133718(74621741, -), CAediting_1133719(74621759, -), CAediting_1133720(74621766, -), CAediting_1133721(74621779, -), CAediting_1133722(74621806, -), CAediting_1133723(74621810, -), CAediting_1133724(74621833, -), CAediting_1133725(74621885, -), CAediting_1133726(74621890, -), CAediting_1133727(74621898, -), CAediting_1133728(74621904, -), CAediting_1133729(74621928, -), CAediting_1133730(74622372, -), CAediting_1133731(74622373, -), CAediting_1133732(74622380, -), CAediting_1133733(74622395, -), CAediting_1133734(74622404, -), CAediting_1133735(74622407, -), CAediting_1133736(74622408, -), CAediting_1133737(74622452, -), CAediting_1133738(74622454, -), CAediting_1133739(74622456, -), CAediting_1133740(74622457, -), CAediting_1133741(74622460, -), CAediting_1133742(74624472, -), CAediting_1133743(74624481, -), CAediting_1133744(74629429, -), CAediting_1133745(74629479, -), CAediting_1133746(74629493, -), CAediting_1133747(74629583, -), CAediting_1133748(74630168, -), CAediting_1133749(74630220, -), CAediting_1133750(74630228, -), CAediting_1133751(74630233, -), CAediting_1133752(74630296, -), CAediting_1133753(74630303, -), CAediting_1133754(74630370, -), CAediting_1133755(74630371, -), CAediting_1133756(74631301, -), CAediting_1133757(74631866, -), CAediting_1133758(74631892, -), CAediting_1133759(74631893, -), CAediting_1133760(74632871, -), CAediting_1133761(74633837, -), CAediting_1133762(74633855, -), CAediting_1133763(74637223, -), CAediting_1133764(74637430, -), CAediting_1133765(74637619, -), CAediting_1133766(74637792, -), CAediting_1133767(74640205, -), CAediting_1133768(74640211, -), CAediting_1133769(74640215, -), CAediting_1133770(74640242, -), CAediting_1133771(74640290, -), CAediting_1133772(74640292, -), CAediting_1133773(74640575, -), CAediting_1133774(74640879, -), CAediting_1133775(74641301, -), CAediting_1133776(74641782, -), CAediting_1133777(74642317, -), CAediting_1133778(74642320, -), CAediting_1133779(74642403, -), CAediting_1133780(74642548, -), CAediting_1133781(74642646, -), CAediting_1133782(74643253, -), CAediting_1133783(74643808, -), CAediting_1133784(74645603, -), CAediting_1133785(74645604, -), CAediting_1133786(74645607, -), CAediting_1133787(74645609, -), CAediting_1133788(74645628, -), CAediting_1133789(74645632, -), CAediting_1133790(74645807, -), CAediting_1133791(74645877, -), CAediting_1133792(74645885, -), CAediting_1133793(74645891, -), CAediting_1133794(74645901, -), CAediting_1133795(74645953, -), CAediting_1133796(74645954, -), CAediting_1133797(74645957, -), CAediting_1133798(74646020, -), CAediting_1133799(74646209, -), CAediting_1133800(74646598, -), CAediting_1133801(74646656, -), CAediting_1133802(74646674, -), CAediting_1133803(74646686, -), CAediting_1133804(74646964, -), CAediting_1133805(74647399, -), CAediting_1133806(74647416, -), CAediting_1133807(74647426, -), CAediting_1133808(74647748, -), CAediting_1133809(74647864, -), CAediting_1133810(74648049, -), CAediting_1133811(74648073, -), CAediting_1133812(74648093, -), CAediting_1133813(74648356, -), CAediting_1133814(74648586, -), CAediting_1133815(74648591, -), CAediting_1133816(74648644, -), CAediting_1133817(74648900, -), CAediting_1133818(74648987, -), CAediting_1133819(74648998, -), CAediting_1133820(74649030, -), CAediting_1133821(74649066, -), CAediting_1133822(74649073, -), CAediting_1133823(74650761, -), CAediting_1133824(74650777, -), CAediting_1133825(74650801, -), CAediting_1133826(74650815, -), CAediting_1133827(74650825, -), CAediting_1133828(74650875, -), CAediting_1133829(74651373, -), CAediting_1133830(74651383, -), CAediting_1133831(74651388, -), CAediting_1133832(74651400, -), CAediting_1133833(74651401, -), CAediting_1133834(74651452, -), CAediting_1133835(74651463, -), CAediting_1133836(74651489, -), CAediting_1133837(74651491, -), CAediting_1133838(74651495, -), CAediting_1133839(74651519, -), CAediting_1133840(74651524, -), CAediting_1133841(74651536, -), CAediting_1133842(74651567, -), CAediting_1133843(74652876, -), CAediting_1133844(74652954, -), CAediting_1133845(74653151, -), CAediting_1133846(74653217, -), CAediting_1133847(74653256, -), CAediting_1133848(74653263, -), CAediting_1133849(74655378, -), CAediting_1133850(74656596, -), CAediting_1133851(74656621, -), CAediting_1133852(74656637, -), CAediting_1133853(74656640, -), CAediting_1133854(74656707, -), CAediting_1133855(74656747, -), CAediting_1133856(74657608, -), CAediting_1133857(74657613, -), CAediting_1133858(74657640, -), CAediting_1133859(74657747, -), CAediting_1133860(74657769, -), CAediting_1133861(74658860, -), CAediting_1133862(74658864, -), CAediting_1133863(74658865, -), CAediting_1133864(74658873, -), CAediting_1133865(74658883, -), CAediting_1133866(74658884, -), CAediting_1133867(74658896, -), CAediting_1133868(74658912, -), CAediting_1133869(74658914, -), CAediting_1133870(74658951, -), CAediting_1133871(74658957, -), CAediting_1133872(74659006, -), CAediting_1133873(74659018, -), CAediting_1133874(74659049, -), CAediting_1133875(74659495, -), CAediting_1133876(74659543, -), CAediting_1133877(74659589, -), CAediting_1133878(74659595, -), CAediting_1133879(74660003, -), CAediting_1133880(74660041, -), CAediting_1133881(74660049, -), CAediting_1133882(74660329, -), CAediting_1133883(74660353, -), CAediting_1133884(74660370, -), CAediting_1133885(74660377, -), CAediting_1133886(74660409, -), CAediting_1133887(74660447, -), CAediting_1133888(74660451, -), CAediting_1133889(74663176, -), CAediting_1133890(74663177, -), CAediting_1133891(74664154, -), CAediting_1133892(74664170, -), CAediting_1133893(74664178, -), CAediting_1133894(74664183, -), CAediting_1133895(74664223, -), CAediting_1133896(74664237, -), CAediting_1133897(74664525, -), CAediting_1133898(74664555, -), CAediting_1133899(74664627, -), CAediting_1133900(74664633, -), CAediting_1133901(74664637, -), CAediting_1133902(74664640, -), CAediting_1133903(74664666, -), CAediting_1133904(74664667, -), CAediting_1133905(74664680, -), CAediting_1133906(74664692, -), CAediting_1133907(74665665, -), CAediting_1133908(74665781, -), CAediting_1133909(74665979, -),

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RNA editing positional annotations for RFWD3 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1133715	chr16_74621716_-	UTR3
CAediting_1133716	chr16_74621723_-	UTR3
CAediting_1133717	chr16_74621731_-	UTR3
CAediting_1133718	chr16_74621741_-	UTR3
CAediting_1133719	chr16_74621759_-	UTR3
CAediting_1133720	chr16_74621766_-	UTR3
CAediting_1133721	chr16_74621779_-	UTR3
CAediting_1133722	chr16_74621806_-	UTR3
CAediting_1133723	chr16_74621810_-	UTR3
CAediting_1133724	chr16_74621833_-	UTR3
CAediting_1133725	chr16_74621885_-	UTR3
CAediting_1133726	chr16_74621890_-	UTR3
CAediting_1133727	chr16_74621898_-	UTR3
CAediting_1133728	chr16_74621904_-	UTR3
CAediting_1133729	chr16_74621928_-	UTR3
CAediting_1133730	chr16_74622372_-	UTR3
CAediting_1133731	chr16_74622373_-	UTR3
CAediting_1133732	chr16_74622380_-	UTR3
CAediting_1133733	chr16_74622395_-	UTR3
CAediting_1133734	chr16_74622404_-	UTR3
CAediting_1133735	chr16_74622407_-	UTR3
CAediting_1133736	chr16_74622408_-	UTR3
CAediting_1133737	chr16_74622452_-	UTR3
CAediting_1133738	chr16_74622454_-	UTR3
CAediting_1133739	chr16_74622456_-	UTR3
CAediting_1133740	chr16_74622457_-	UTR3
CAediting_1133741	chr16_74622460_-	UTR3
CAediting_1133742	chr16_74624472_-	intronic
CAediting_1133743	chr16_74624481_-	intronic
CAediting_1133744	chr16_74629429_-	ncRNA_intronic
CAediting_1133745	chr16_74629479_-	ncRNA_intronic
CAediting_1133746	chr16_74629493_-	ncRNA_intronic
CAediting_1133747	chr16_74629583_-	ncRNA_intronic
CAediting_1133748	chr16_74630168_-	ncRNA_intronic
CAediting_1133749	chr16_74630220_-	ncRNA_intronic
CAediting_1133750	chr16_74630228_-	ncRNA_intronic
CAediting_1133751	chr16_74630233_-	ncRNA_intronic
CAediting_1133752	chr16_74630296_-	ncRNA_intronic
CAediting_1133753	chr16_74630303_-	ncRNA_intronic
CAediting_1133754	chr16_74630370_-	ncRNA_intronic
CAediting_1133755	chr16_74630371_-	ncRNA_intronic
CAediting_1133756	chr16_74631301_-	ncRNA_intronic
CAediting_1133757	chr16_74631866_-	ncRNA_intronic
CAediting_1133758	chr16_74631892_-	ncRNA_intronic
CAediting_1133759	chr16_74631893_-	ncRNA_intronic
CAediting_1133760	chr16_74632871_-	intronic
CAediting_1133761	chr16_74633837_-	intronic
CAediting_1133762	chr16_74633855_-	intronic
CAediting_1133763	chr16_74637223_-	intronic
CAediting_1133764	chr16_74637430_-	intronic
CAediting_1133765	chr16_74637619_-	intronic
CAediting_1133766	chr16_74637792_-	intronic
CAediting_1133767	chr16_74640205_-	ncRNA_intronic
CAediting_1133768	chr16_74640211_-	ncRNA_intronic
CAediting_1133769	chr16_74640215_-	ncRNA_intronic
CAediting_1133770	chr16_74640242_-	ncRNA_intronic
CAediting_1133771	chr16_74640290_-	ncRNA_intronic
CAediting_1133772	chr16_74640292_-	ncRNA_intronic
CAediting_1133773	chr16_74640575_-	ncRNA_intronic
CAediting_1133774	chr16_74640879_-	ncRNA_intronic
CAediting_1133775	chr16_74641301_-	ncRNA_intronic
CAediting_1133776	chr16_74641782_-	ncRNA_intronic
CAediting_1133777	chr16_74642317_-	ncRNA_intronic
CAediting_1133778	chr16_74642320_-	ncRNA_intronic
CAediting_1133779	chr16_74642403_-	ncRNA_intronic
CAediting_1133780	chr16_74642548_-	ncRNA_intronic
CAediting_1133781	chr16_74642646_-	ncRNA_intronic
CAediting_1133782	chr16_74643253_-	ncRNA_intronic
CAediting_1133783	chr16_74643808_-	ncRNA_intronic
CAediting_1133784	chr16_74645603_-	ncRNA_intronic
CAediting_1133785	chr16_74645604_-	ncRNA_intronic
CAediting_1133786	chr16_74645607_-	ncRNA_intronic
CAediting_1133787	chr16_74645609_-	ncRNA_intronic
CAediting_1133788	chr16_74645628_-	ncRNA_intronic
CAediting_1133789	chr16_74645632_-	ncRNA_intronic
CAediting_1133790	chr16_74645807_-	ncRNA_intronic
CAediting_1133791	chr16_74645877_-	ncRNA_intronic
CAediting_1133792	chr16_74645885_-	ncRNA_intronic
CAediting_1133793	chr16_74645891_-	ncRNA_intronic
CAediting_1133794	chr16_74645901_-	ncRNA_intronic
CAediting_1133795	chr16_74645953_-	ncRNA_intronic
CAediting_1133796	chr16_74645954_-	ncRNA_intronic
CAediting_1133797	chr16_74645957_-	ncRNA_intronic
CAediting_1133798	chr16_74646020_-	ncRNA_intronic
CAediting_1133799	chr16_74646209_-	ncRNA_intronic
CAediting_1133800	chr16_74646598_-	ncRNA_intronic
CAediting_1133801	chr16_74646656_-	ncRNA_intronic
CAediting_1133802	chr16_74646674_-	ncRNA_intronic
CAediting_1133803	chr16_74646686_-	ncRNA_intronic
CAediting_1133804	chr16_74646964_-	ncRNA_intronic
CAediting_1133805	chr16_74647399_-	ncRNA_intronic
CAediting_1133806	chr16_74647416_-	ncRNA_intronic
CAediting_1133807	chr16_74647426_-	ncRNA_intronic
CAediting_1133808	chr16_74647748_-	ncRNA_intronic
CAediting_1133809	chr16_74647864_-	ncRNA_intronic
CAediting_1133810	chr16_74648049_-	ncRNA_intronic
CAediting_1133811	chr16_74648073_-	ncRNA_intronic
CAediting_1133812	chr16_74648093_-	ncRNA_intronic
CAediting_1133813	chr16_74648356_-	ncRNA_intronic
CAediting_1133814	chr16_74648586_-	ncRNA_intronic
CAediting_1133815	chr16_74648591_-	ncRNA_intronic
CAediting_1133816	chr16_74648644_-	ncRNA_intronic
CAediting_1133817	chr16_74648900_-	ncRNA_intronic
CAediting_1133818	chr16_74648987_-	ncRNA_intronic
CAediting_1133819	chr16_74648998_-	ncRNA_intronic
CAediting_1133820	chr16_74649030_-	ncRNA_intronic
CAediting_1133821	chr16_74649066_-	ncRNA_intronic
CAediting_1133822	chr16_74649073_-	ncRNA_intronic
CAediting_1133823	chr16_74650761_-	intronic
CAediting_1133824	chr16_74650777_-	intronic
CAediting_1133825	chr16_74650801_-	intronic
CAediting_1133826	chr16_74650815_-	intronic
CAediting_1133827	chr16_74650825_-	intronic
CAediting_1133828	chr16_74650875_-	intronic
CAediting_1133829	chr16_74651373_-	intronic
CAediting_1133830	chr16_74651383_-	intronic
CAediting_1133831	chr16_74651388_-	intronic
CAediting_1133832	chr16_74651400_-	intronic
CAediting_1133833	chr16_74651401_-	intronic
CAediting_1133834	chr16_74651452_-	intronic
CAediting_1133835	chr16_74651463_-	intronic
CAediting_1133836	chr16_74651489_-	intronic
CAediting_1133837	chr16_74651491_-	intronic
CAediting_1133838	chr16_74651495_-	intronic
CAediting_1133839	chr16_74651519_-	intronic
CAediting_1133840	chr16_74651524_-	intronic
CAediting_1133841	chr16_74651536_-	intronic
CAediting_1133842	chr16_74651567_-	intronic
CAediting_1133843	chr16_74652876_-	intronic
CAediting_1133844	chr16_74652954_-	intronic
CAediting_1133845	chr16_74653151_-	intronic
CAediting_1133846	chr16_74653217_-	intronic
CAediting_1133847	chr16_74653256_-	intronic
CAediting_1133848	chr16_74653263_-	intronic
CAediting_1133849	chr16_74655378_-	intronic
CAediting_1133850	chr16_74656596_-	intronic
CAediting_1133851	chr16_74656621_-	intronic
CAediting_1133852	chr16_74656637_-	intronic
CAediting_1133853	chr16_74656640_-	intronic
CAediting_1133854	chr16_74656707_-	intronic
CAediting_1133855	chr16_74656747_-	intronic
CAediting_1133856	chr16_74657608_-	intronic
CAediting_1133857	chr16_74657613_-	intronic
CAediting_1133858	chr16_74657640_-	intronic
CAediting_1133859	chr16_74657747_-	intronic
CAediting_1133860	chr16_74657769_-	intronic
CAediting_1133861	chr16_74658860_-	intronic
CAediting_1133862	chr16_74658864_-	intronic
CAediting_1133863	chr16_74658865_-	intronic
CAediting_1133864	chr16_74658873_-	intronic
CAediting_1133865	chr16_74658883_-	intronic
CAediting_1133866	chr16_74658884_-	intronic
CAediting_1133867	chr16_74658896_-	intronic
CAediting_1133868	chr16_74658912_-	intronic
CAediting_1133869	chr16_74658914_-	intronic
CAediting_1133870	chr16_74658951_-	intronic
CAediting_1133871	chr16_74658957_-	intronic
CAediting_1133872	chr16_74659006_-	intronic
CAediting_1133873	chr16_74659018_-	intronic
CAediting_1133874	chr16_74659049_-	intronic
CAediting_1133875	chr16_74659495_-	intronic
CAediting_1133876	chr16_74659543_-	intronic
CAediting_1133877	chr16_74659589_-	intronic
CAediting_1133878	chr16_74659595_-	intronic
CAediting_1133879	chr16_74660003_-	intronic
CAediting_1133880	chr16_74660041_-	intronic
CAediting_1133881	chr16_74660049_-	intronic
CAediting_1133882	chr16_74660329_-	intronic
CAediting_1133883	chr16_74660353_-	intronic
CAediting_1133884	chr16_74660370_-	intronic
CAediting_1133885	chr16_74660377_-	intronic
CAediting_1133886	chr16_74660409_-	intronic
CAediting_1133887	chr16_74660447_-	intronic
CAediting_1133888	chr16_74660451_-	intronic
CAediting_1133889	chr16_74663176_-	ncRNA_intronic
CAediting_1133890	chr16_74663177_-	ncRNA_intronic
CAediting_1133891	chr16_74664154_-	ncRNA_intronic
CAediting_1133892	chr16_74664170_-	ncRNA_intronic
CAediting_1133893	chr16_74664178_-	ncRNA_intronic
CAediting_1133894	chr16_74664183_-	ncRNA_intronic
CAediting_1133895	chr16_74664223_-	ncRNA_intronic
CAediting_1133896	chr16_74664237_-	ncRNA_intronic
CAediting_1133897	chr16_74664525_-	ncRNA_exonic
CAediting_1133898	chr16_74664555_-	ncRNA_exonic
CAediting_1133899	chr16_74664627_-	ncRNA_exonic
CAediting_1133900	chr16_74664633_-	ncRNA_exonic
CAediting_1133901	chr16_74664637_-	ncRNA_exonic
CAediting_1133902	chr16_74664640_-	ncRNA_exonic
CAediting_1133903	chr16_74664666_-	ncRNA_exonic
CAediting_1133904	chr16_74664667_-	ncRNA_exonic
CAediting_1133905	chr16_74664680_-	ncRNA_exonic
CAediting_1133906	chr16_74664692_-	ncRNA_exonic
CAediting_1133907	chr16_74665665_-	ncRNA_intronic
CAediting_1133908	chr16_74665781_-	ncRNA_intronic
CAediting_1133909	chr16_74665979_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1133715	chr16_74621716_-	SINE	Alu	AluSx
CAediting_1133716	chr16_74621723_-	SINE	Alu	AluSx
CAediting_1133717	chr16_74621731_-	SINE	Alu	AluSx
CAediting_1133718	chr16_74621741_-	SINE	Alu	AluSx
CAediting_1133719	chr16_74621759_-	SINE	Alu	AluSx
CAediting_1133720	chr16_74621766_-	SINE	Alu	AluSx
CAediting_1133721	chr16_74621779_-	SINE	Alu	AluSx
CAediting_1133722	chr16_74621806_-	SINE	Alu	AluSx
CAediting_1133723	chr16_74621810_-	SINE	Alu	AluSx
CAediting_1133724	chr16_74621833_-	SINE	Alu	AluSx
CAediting_1133725	chr16_74621885_-	SINE	Alu	AluSx
CAediting_1133726	chr16_74621890_-	SINE	Alu	AluSx
CAediting_1133727	chr16_74621898_-	SINE	Alu	AluSx
CAediting_1133728	chr16_74621904_-	SINE	Alu	AluSx
CAediting_1133730	chr16_74622372_-	SINE	Alu	AluJb
CAediting_1133731	chr16_74622373_-	SINE	Alu	AluJb
CAediting_1133732	chr16_74622380_-	SINE	Alu	AluJb
CAediting_1133733	chr16_74622395_-	SINE	Alu	AluJb
CAediting_1133734	chr16_74622404_-	SINE	Alu	AluJb
CAediting_1133735	chr16_74622407_-	SINE	Alu	AluJb
CAediting_1133736	chr16_74622408_-	SINE	Alu	AluJb
CAediting_1133737	chr16_74622452_-	SINE	Alu	AluJb
CAediting_1133738	chr16_74622454_-	SINE	Alu	AluJb
CAediting_1133739	chr16_74622456_-	SINE	Alu	AluJb
CAediting_1133740	chr16_74622457_-	SINE	Alu	AluJb
CAediting_1133741	chr16_74622460_-	SINE	Alu	AluJb
CAediting_1133742	chr16_74624472_-	SINE	Alu	AluSq2
CAediting_1133743	chr16_74624481_-	SINE	Alu	AluSq2
CAediting_1133744	chr16_74629429_-	SINE	Alu	AluSz
CAediting_1133745	chr16_74629479_-	SINE	Alu	AluSz
CAediting_1133746	chr16_74629493_-	SINE	Alu	AluSz
CAediting_1133747	chr16_74629583_-	SINE	Alu	AluSz
CAediting_1133748	chr16_74630168_-	SINE	Alu	AluSx3
CAediting_1133749	chr16_74630220_-	SINE	Alu	AluSx3
CAediting_1133750	chr16_74630228_-	SINE	Alu	AluSx3
CAediting_1133751	chr16_74630233_-	SINE	Alu	AluSx3
CAediting_1133752	chr16_74630296_-	SINE	Alu	AluSx3
CAediting_1133753	chr16_74630303_-	SINE	Alu	AluSx3
CAediting_1133754	chr16_74630370_-	SINE	Alu	AluSx3
CAediting_1133755	chr16_74630371_-	SINE	Alu	AluSx3
CAediting_1133756	chr16_74631301_-	SINE	Alu	AluSz
CAediting_1133757	chr16_74631866_-	SINE	Alu	AluSx
CAediting_1133758	chr16_74631892_-	SINE	Alu	AluSx
CAediting_1133759	chr16_74631893_-	SINE	Alu	AluSx
CAediting_1133760	chr16_74632871_-	SINE	Alu	AluSx
CAediting_1133761	chr16_74633837_-	SINE	Alu	AluJb
CAediting_1133762	chr16_74633855_-	SINE	Alu	AluJb
CAediting_1133763	chr16_74637223_-	SINE	Alu	AluJr4
CAediting_1133764	chr16_74637430_-	SINE	Alu	AluSx1
CAediting_1133765	chr16_74637619_-	SINE	Alu	AluSx1
CAediting_1133767	chr16_74640205_-	SINE	Alu	AluSg
CAediting_1133768	chr16_74640211_-	SINE	Alu	AluSg
CAediting_1133769	chr16_74640215_-	SINE	Alu	AluSg
CAediting_1133770	chr16_74640242_-	SINE	Alu	AluSg
CAediting_1133771	chr16_74640290_-	SINE	Alu	AluSg
CAediting_1133772	chr16_74640292_-	SINE	Alu	AluSg
CAediting_1133773	chr16_74640575_-	SINE	Alu	AluJr
CAediting_1133774	chr16_74640879_-	SINE	Alu	AluSx3
CAediting_1133775	chr16_74641301_-	SINE	Alu	AluSq2
CAediting_1133776	chr16_74641782_-	SINE	Alu	AluSq2
CAediting_1133777	chr16_74642317_-	SINE	Alu	AluSz6
CAediting_1133778	chr16_74642320_-	SINE	Alu	AluSz6
CAediting_1133779	chr16_74642403_-	SINE	Alu	AluSz6
CAediting_1133780	chr16_74642548_-	SINE	Alu	AluJr
CAediting_1133781	chr16_74642646_-	SINE	Alu	AluJr
CAediting_1133782	chr16_74643253_-	SINE	Alu	FLAM_C
CAediting_1133783	chr16_74643808_-	SINE	Alu	AluY
CAediting_1133784	chr16_74645603_-	SINE	Alu	AluSz
CAediting_1133785	chr16_74645604_-	SINE	Alu	AluSz
CAediting_1133786	chr16_74645607_-	SINE	Alu	AluSz
CAediting_1133787	chr16_74645609_-	SINE	Alu	AluSz
CAediting_1133788	chr16_74645628_-	SINE	Alu	AluSz
CAediting_1133789	chr16_74645632_-	SINE	Alu	AluSz
CAediting_1133790	chr16_74645807_-	SINE	Alu	AluY
CAediting_1133791	chr16_74645877_-	SINE	Alu	AluY
CAediting_1133792	chr16_74645885_-	SINE	Alu	AluY
CAediting_1133793	chr16_74645891_-	SINE	Alu	AluY
CAediting_1133794	chr16_74645901_-	SINE	Alu	AluY
CAediting_1133795	chr16_74645953_-	SINE	Alu	AluY
CAediting_1133796	chr16_74645954_-	SINE	Alu	AluY
CAediting_1133797	chr16_74645957_-	SINE	Alu	AluY
CAediting_1133798	chr16_74646020_-	SINE	Alu	AluY
CAediting_1133799	chr16_74646209_-	SINE	Alu	AluJo
CAediting_1133800	chr16_74646598_-	SINE	Alu	AluSc8
CAediting_1133801	chr16_74646656_-	SINE	Alu	AluSc8
CAediting_1133802	chr16_74646674_-	SINE	Alu	AluSc8
CAediting_1133803	chr16_74646686_-	SINE	Alu	AluSc8
CAediting_1133804	chr16_74646964_-	SINE	Alu	AluY
CAediting_1133805	chr16_74647399_-	SINE	Alu	AluSx
CAediting_1133806	chr16_74647416_-	SINE	Alu	AluSx
CAediting_1133807	chr16_74647426_-	SINE	Alu	AluSx
CAediting_1133808	chr16_74647748_-	SINE	Alu	AluSx1
CAediting_1133809	chr16_74647864_-	SINE	Alu	AluSx1
CAediting_1133810	chr16_74648049_-	SINE	Alu	AluJb
CAediting_1133811	chr16_74648073_-	SINE	Alu	AluJb
CAediting_1133812	chr16_74648093_-	SINE	Alu	AluJb
CAediting_1133813	chr16_74648356_-	SINE	Alu	AluSx
CAediting_1133814	chr16_74648586_-	SINE	Alu	AluSx4
CAediting_1133815	chr16_74648591_-	SINE	Alu	AluSx4
CAediting_1133816	chr16_74648644_-	SINE	Alu	AluSx4
CAediting_1133817	chr16_74648900_-	SINE	Alu	AluJo
CAediting_1133818	chr16_74648987_-	SINE	Alu	AluJo
CAediting_1133819	chr16_74648998_-	SINE	Alu	AluJo
CAediting_1133820	chr16_74649030_-	SINE	Alu	AluJo
CAediting_1133821	chr16_74649066_-	SINE	Alu	AluJo
CAediting_1133822	chr16_74649073_-	SINE	Alu	AluJo
CAediting_1133823	chr16_74650761_-	SINE	Alu	AluJr
CAediting_1133824	chr16_74650777_-	SINE	Alu	AluJr
CAediting_1133825	chr16_74650801_-	SINE	Alu	AluJr
CAediting_1133826	chr16_74650815_-	SINE	Alu	AluJr
CAediting_1133827	chr16_74650825_-	SINE	Alu	AluJr
CAediting_1133828	chr16_74650875_-	SINE	Alu	AluJr
CAediting_1133829	chr16_74651373_-	SINE	Alu	AluJb
CAediting_1133830	chr16_74651383_-	SINE	Alu	AluJb
CAediting_1133831	chr16_74651388_-	SINE	Alu	AluJb
CAediting_1133832	chr16_74651400_-	SINE	Alu	AluJb
CAediting_1133833	chr16_74651401_-	SINE	Alu	AluJb
CAediting_1133834	chr16_74651452_-	SINE	Alu	AluJb
CAediting_1133835	chr16_74651463_-	SINE	Alu	AluJb
CAediting_1133836	chr16_74651489_-	SINE	Alu	AluJb
CAediting_1133837	chr16_74651491_-	SINE	Alu	AluJb
CAediting_1133838	chr16_74651495_-	SINE	Alu	AluJb
CAediting_1133839	chr16_74651519_-	SINE	Alu	AluJb
CAediting_1133840	chr16_74651524_-	SINE	Alu	AluJb
CAediting_1133841	chr16_74651536_-	SINE	Alu	AluJb
CAediting_1133842	chr16_74651567_-	SINE	Alu	AluJb
CAediting_1133843	chr16_74652876_-	SINE	Alu	AluSz
CAediting_1133844	chr16_74652954_-	SINE	Alu	AluSz
CAediting_1133845	chr16_74653151_-	SINE	Alu	AluJb
CAediting_1133846	chr16_74653217_-	SINE	Alu	AluJb
CAediting_1133847	chr16_74653256_-	SINE	Alu	AluJb
CAediting_1133848	chr16_74653263_-	SINE	Alu	AluJb
CAediting_1133849	chr16_74655378_-	SINE	Alu	AluY
CAediting_1133850	chr16_74656596_-	SINE	Alu	AluSx
CAediting_1133851	chr16_74656621_-	SINE	Alu	AluSx
CAediting_1133852	chr16_74656637_-	SINE	Alu	AluSx
CAediting_1133853	chr16_74656640_-	SINE	Alu	AluSx
CAediting_1133854	chr16_74656707_-	SINE	Alu	AluSx
CAediting_1133855	chr16_74656747_-	SINE	Alu	AluSx
CAediting_1133856	chr16_74657608_-	SINE	Alu	AluSx1
CAediting_1133857	chr16_74657613_-	SINE	Alu	AluSx1
CAediting_1133858	chr16_74657640_-	SINE	Alu	AluSx1
CAediting_1133859	chr16_74657747_-	SINE	Alu	AluSx1
CAediting_1133860	chr16_74657769_-	SINE	Alu	AluSx1
CAediting_1133861	chr16_74658860_-	SINE	Alu	AluSz6
CAediting_1133862	chr16_74658864_-	SINE	Alu	AluSz6
CAediting_1133863	chr16_74658865_-	SINE	Alu	AluSz6
CAediting_1133864	chr16_74658873_-	SINE	Alu	AluSz6
CAediting_1133865	chr16_74658883_-	SINE	Alu	AluSz6
CAediting_1133866	chr16_74658884_-	SINE	Alu	AluSz6
CAediting_1133867	chr16_74658896_-	SINE	Alu	AluSz6
CAediting_1133868	chr16_74658912_-	SINE	Alu	AluSz6
CAediting_1133869	chr16_74658914_-	SINE	Alu	AluSz6
CAediting_1133870	chr16_74658951_-	SINE	Alu	AluSz6
CAediting_1133871	chr16_74658957_-	SINE	Alu	AluSz6
CAediting_1133872	chr16_74659006_-	SINE	Alu	AluSz6
CAediting_1133873	chr16_74659018_-	SINE	Alu	AluSz6
CAediting_1133874	chr16_74659049_-	SINE	Alu	AluSz6
CAediting_1133875	chr16_74659495_-	SINE	Alu	AluSz6
CAediting_1133876	chr16_74659543_-	SINE	Alu	AluSz6
CAediting_1133877	chr16_74659589_-	SINE	Alu	AluSz6
CAediting_1133878	chr16_74659595_-	SINE	Alu	AluSz6
CAediting_1133879	chr16_74660003_-	SINE	Alu	AluJb
CAediting_1133880	chr16_74660041_-	SINE	Alu	AluJb
CAediting_1133881	chr16_74660049_-	SINE	Alu	AluJb
CAediting_1133882	chr16_74660329_-	SINE	Alu	AluSx
CAediting_1133883	chr16_74660353_-	SINE	Alu	AluSx
CAediting_1133884	chr16_74660370_-	SINE	Alu	AluSx
CAediting_1133885	chr16_74660377_-	SINE	Alu	AluSx
CAediting_1133886	chr16_74660409_-	SINE	Alu	AluSx
CAediting_1133887	chr16_74660447_-	SINE	Alu	AluSx
CAediting_1133888	chr16_74660451_-	SINE	Alu	AluSx
CAediting_1133889	chr16_74663176_-	SINE	Alu	AluY
CAediting_1133890	chr16_74663177_-	SINE	Alu	AluY
CAediting_1133891	chr16_74664154_-	SINE	Alu	AluJb
CAediting_1133892	chr16_74664170_-	SINE	Alu	AluJb
CAediting_1133893	chr16_74664178_-	SINE	Alu	AluJb
CAediting_1133894	chr16_74664183_-	SINE	Alu	AluJb
CAediting_1133895	chr16_74664223_-	SINE	Alu	AluJb
CAediting_1133896	chr16_74664237_-	SINE	Alu	AluJb
CAediting_1133897	chr16_74664525_-	SINE	Alu	AluSx3
CAediting_1133898	chr16_74664555_-	SINE	Alu	AluSx3
CAediting_1133899	chr16_74664627_-	SINE	Alu	AluSx3
CAediting_1133900	chr16_74664633_-	SINE	Alu	AluSx3
CAediting_1133901	chr16_74664637_-	SINE	Alu	AluSx3
CAediting_1133902	chr16_74664640_-	SINE	Alu	AluSx3
CAediting_1133903	chr16_74664666_-	SINE	Alu	AluSx3
CAediting_1133904	chr16_74664667_-	SINE	Alu	AluSx3
CAediting_1133905	chr16_74664680_-	SINE	Alu	AluSx3
CAediting_1133906	chr16_74664692_-	SINE	Alu	AluSx3
CAediting_1133907	chr16_74665665_-	SINE	Alu	AluJb
CAediting_1133908	chr16_74665781_-	SINE	Alu	AluSx
CAediting_1133909	chr16_74665979_-	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for RFWD3

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000168411.12.RFWD3.

Correlation between RNA A-to-I editing and PSI for ENSG00000168411.12.RFWD3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RFWD3

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for RFWD3

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for RFWD3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000168411.12	ENST00000571750	hsa-miR-195-3p	74623822	74623828	7mer-m8	74623821	74623840	156	-19.59

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for RFWD3

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for RFWD3

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LUAD	CAediting_1133738	chr16_74622454_-	0.00644926470389706	0.329638632035801	.	.	.	.
CESC	CAediting_1133899	chr16_74664627_-	.	.	0.0458820154569234	0.272890729440126	.	.
LUAD	CAediting_1133899	chr16_74664627_-	.	.	.	.	0.0467042079445899	0.260032626817782
STAD	CAediting_1133899	chr16_74664627_-	.	.	.	.	0.0344236427684777	0.177025652300826
STAD	CAediting_1133900	chr16_74664633_-	.	.	0.0297468220494229	0.190712504554205	.	.

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Relation with cancer stages for RFWD3

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
HNSC	clinical_stage	CAediting_1133900	chr16_74664633_-	0.0482746122306495	-0.211168439788108

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Relation with survival for RFWD3

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for RFWD3

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for RFWD3

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
RFWD3	C4521564	FANCONI ANEMIA, COMPLEMENTATION GROUP W	2	UNIPROT
RFWD3	C0015625	Fanconi Anemia	1	ORPHANET
RFWD3	C1336708	Testicular Germ Cell Tumor	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene