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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: FAM118A (CAeditome ID:55007)

Gene summary for FAM118A

check button Gene summary
Gene informationGene symbol

FAM118A

Gene ID

55007

Gene namefamily with sequence similarity 118 member A
SynonymsC22orf8
Cytomap

22q13.31

Type of geneprotein-coding
Descriptionprotein FAM118AbK268H5.C22.4
Modification date20210518
UniProtAcc

Q9NWS6

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for FAM118A

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000100376.10
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1493234(45312409, +), CAediting_1493235(45312418, +), CAediting_1493236(45312434, +), CAediting_1493237(45312458, +), CAediting_1493238(45312489, +), CAediting_1493239(45312491, +), CAediting_1493240(45312494, +), CAediting_1493241(45312567, +), CAediting_1493242(45312595, +), CAediting_1493243(45313557, +), CAediting_1493244(45313585, +), CAediting_1493245(45316079, +), CAediting_1493246(45316120, +), CAediting_1493247(45316169, +), CAediting_1493248(45317242, +), CAediting_1493249(45317291, +), CAediting_1493250(45320302, +), CAediting_1493251(45320309, +), CAediting_1493252(45320315, +), CAediting_1493253(45320562, +), CAediting_1493254(45321443, +), CAediting_1493255(45321583, +), CAediting_1493256(45321591, +), CAediting_1493257(45321606, +), CAediting_1493258(45321619, +), CAediting_1493259(45321675, +), CAediting_1493260(45321676, +), CAediting_1493261(45321687, +), CAediting_1493262(45321690, +), CAediting_1493263(45326733, +), CAediting_1493264(45328489, +), CAediting_1493265(45328528, +), CAediting_1493266(45328541, +), CAediting_1493267(45328557, +), CAediting_1493268(45328621, +), CAediting_1493269(45328695, +), CAediting_1493270(45328788, +), CAediting_1493271(45330229, +), CAediting_1493272(45330237, +), CAediting_1493273(45330294, +), CAediting_1493274(45330297, +), CAediting_1493275(45330307, +), CAediting_1493276(45331204, +), CAediting_1493277(45331220, +), CAediting_1493278(45331225, +), CAediting_1493279(45331226, +), CAediting_1493280(45331230, +), CAediting_1493281(45331270, +), CAediting_1493282(45331284, +), CAediting_1493283(45331419, +), CAediting_1493284(45331492, +), CAediting_1493285(45332803, +), CAediting_1493286(45332808, +), CAediting_1493287(45332824, +), CAediting_1493288(45332826, +), CAediting_1493289(45332840, +), CAediting_1493290(45332847, +), CAediting_1493291(45332861, +), CAediting_1493292(45332870, +), CAediting_1493293(45332873, +), CAediting_1493294(45332885, +), CAediting_1493295(45332910, +), CAediting_1493296(45332917, +), CAediting_1493297(45332926, +), CAediting_1493298(45332943, +), CAediting_1493299(45332952, +), CAediting_1493300(45332965, +), CAediting_1493301(45333014, +), CAediting_1493302(45333017, +), CAediting_1493303(45333019, +), CAediting_1493304(45333030, +), CAediting_1493305(45333252, +), CAediting_1493306(45333271, +), CAediting_1493307(45333276, +), CAediting_1493308(45333293, +), CAediting_1493309(45333316, +), CAediting_1493310(45333324, +), CAediting_1493311(45333325, +), CAediting_1493312(45333331, +), CAediting_1493313(45333344, +), CAediting_1493314(45333382, +), CAediting_1493315(45333404, +), CAediting_1493316(45333406, +), CAediting_1493317(45333419, +), CAediting_1493318(45333420, +), CAediting_1493319(45333428, +), CAediting_1493320(45333527, +), CAediting_1493321(45333553, +), CAediting_1493322(45333615, +), CAediting_1493323(45333619, +), CAediting_1493324(45333662, +), CAediting_1493325(45333723, +), CAediting_1493326(45333761, +), CAediting_1493327(45333766, +), CAediting_1493328(45333782, +), CAediting_1493329(45333785, +), CAediting_1493330(45333786, +), CAediting_1493331(45333796, +), CAediting_1493332(45333827, +), CAediting_1493333(45338253, +), CAediting_1493334(45338294, +), CAediting_1493335(45338307, +), CAediting_1493336(45338330, +), CAediting_1493337(45338347, +), CAediting_1493338(45338356, +), CAediting_1493339(45338359, +), CAediting_1493340(45338369, +), CAediting_1493341(45338396, +), CAediting_1493342(45338409, +), CAediting_1493343(45338412, +), CAediting_1493344(45338414, +), CAediting_1493345(45338474, +), CAediting_1493346(45338488, +), CAediting_1493347(45338489, +), CAediting_1493348(45338501, +), CAediting_1493349(45339141, +), CAediting_1493350(45339147, +), CAediting_1493351(45339149, +), CAediting_1493352(45339158, +), CAediting_1493353(45339176, +), CAediting_1493354(45339210, +), CAediting_1493355(45339218, +), CAediting_1493356(45339220, +), CAediting_1493357(45339231, +), CAediting_1493358(45339235, +), CAediting_1493359(45339236, +), CAediting_1493360(45339237, +), CAediting_1493361(45339238, +), CAediting_1493362(45339240, +), CAediting_1493363(45339249, +), CAediting_1493364(45339278, +), CAediting_1493365(45339284, +), CAediting_1493366(45339288, +), CAediting_1493367(45339301, +), CAediting_1493368(45339324, +), CAediting_1493369(45339349, +), CAediting_1493370(45339354, +), CAediting_1493371(45339356, +), CAediting_1493372(45340825, +), CAediting_1493373(45340827, +), CAediting_1493374(45340833, +), CAediting_1493375(45340841, +), CAediting_1493376(45340850, +), CAediting_1493377(45340852, +), CAediting_1493378(45340857, +), CAediting_1493379(45340863, +), CAediting_1493380(45340872, +), CAediting_1493381(45340877, +), CAediting_1493382(45340882, +), CAediting_1493383(45340889, +), CAediting_1493384(45340902, +), CAediting_1493385(45340903, +), CAediting_1493386(45340920, +), CAediting_1493387(45340932, +), CAediting_1493388(45340942, +), CAediting_1493389(45340944, +), CAediting_1493390(45340952, +), CAediting_1493391(45340955, +), CAediting_1493392(45340958, +), CAediting_1493393(45340964, +), CAediting_1493394(45340968, +), CAediting_1493395(45340969, +), CAediting_1493396(45340977, +), CAediting_1493397(45340983, +), CAediting_1493398(45340986, +), CAediting_1493399(45340988, +), CAediting_1493400(45340994, +), CAediting_1493401(45341000, +), CAediting_1493402(45341003, +), CAediting_1493403(45341012, +), CAediting_1493404(45341025, +), CAediting_1493405(45341042, +), CAediting_1493406(45341046, +), CAediting_1493407(45341064, +), CAediting_1493408(45341065, +), CAediting_1493409(45341077, +), CAediting_1493410(45341079, +), CAediting_1493411(45341083, +),

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RNA editing positional annotations for FAM118A using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1493234chr22_45312409_+ncRNA_intronic
CAediting_1493235chr22_45312418_+ncRNA_intronic
CAediting_1493236chr22_45312434_+ncRNA_intronic
CAediting_1493237chr22_45312458_+ncRNA_intronic
CAediting_1493238chr22_45312489_+ncRNA_intronic
CAediting_1493239chr22_45312491_+ncRNA_intronic
CAediting_1493240chr22_45312494_+ncRNA_intronic
CAediting_1493241chr22_45312567_+ncRNA_intronic
CAediting_1493242chr22_45312595_+ncRNA_intronic
CAediting_1493243chr22_45313557_+ncRNA_intronic
CAediting_1493244chr22_45313585_+ncRNA_intronic
CAediting_1493245chr22_45316079_+ncRNA_intronic
CAediting_1493246chr22_45316120_+ncRNA_intronic
CAediting_1493247chr22_45316169_+ncRNA_intronic
CAediting_1493248chr22_45317242_+ncRNA_intronic
CAediting_1493249chr22_45317291_+ncRNA_intronic
CAediting_1493250chr22_45320302_+ncRNA_intronic
CAediting_1493251chr22_45320309_+ncRNA_intronic
CAediting_1493252chr22_45320315_+ncRNA_intronic
CAediting_1493253chr22_45320562_+ncRNA_intronic
CAediting_1493254chr22_45321443_+ncRNA_intronic
CAediting_1493255chr22_45321583_+ncRNA_intronic
CAediting_1493256chr22_45321591_+ncRNA_intronic
CAediting_1493257chr22_45321606_+ncRNA_intronic
CAediting_1493258chr22_45321619_+ncRNA_intronic
CAediting_1493259chr22_45321675_+ncRNA_intronic
CAediting_1493260chr22_45321676_+ncRNA_intronic
CAediting_1493261chr22_45321687_+ncRNA_intronic
CAediting_1493262chr22_45321690_+ncRNA_intronic
CAediting_1493263chr22_45326733_+ncRNA_intronic
CAediting_1493264chr22_45328489_+UTR3
CAediting_1493265chr22_45328528_+UTR3
CAediting_1493266chr22_45328541_+UTR3
CAediting_1493267chr22_45328557_+UTR3
CAediting_1493268chr22_45328621_+UTR3
CAediting_1493269chr22_45328695_+UTR3
CAediting_1493270chr22_45328788_+UTR3
CAediting_1493271chr22_45330229_+ncRNA_intronic
CAediting_1493272chr22_45330237_+ncRNA_intronic
CAediting_1493273chr22_45330294_+ncRNA_intronic
CAediting_1493274chr22_45330297_+ncRNA_intronic
CAediting_1493275chr22_45330307_+ncRNA_intronic
CAediting_1493276chr22_45331204_+ncRNA_intronic
CAediting_1493277chr22_45331220_+ncRNA_intronic
CAediting_1493278chr22_45331225_+ncRNA_intronic
CAediting_1493279chr22_45331226_+ncRNA_intronic
CAediting_1493280chr22_45331230_+ncRNA_intronic
CAediting_1493281chr22_45331270_+ncRNA_intronic
CAediting_1493282chr22_45331284_+ncRNA_intronic
CAediting_1493283chr22_45331419_+ncRNA_intronic
CAediting_1493284chr22_45331492_+ncRNA_intronic
CAediting_1493285chr22_45332803_+ncRNA_intronic
CAediting_1493286chr22_45332808_+ncRNA_intronic
CAediting_1493287chr22_45332824_+ncRNA_intronic
CAediting_1493288chr22_45332826_+ncRNA_intronic
CAediting_1493289chr22_45332840_+ncRNA_intronic
CAediting_1493290chr22_45332847_+ncRNA_intronic
CAediting_1493291chr22_45332861_+ncRNA_intronic
CAediting_1493292chr22_45332870_+ncRNA_intronic
CAediting_1493293chr22_45332873_+ncRNA_intronic
CAediting_1493294chr22_45332885_+ncRNA_intronic
CAediting_1493295chr22_45332910_+ncRNA_intronic
CAediting_1493296chr22_45332917_+ncRNA_intronic
CAediting_1493297chr22_45332926_+ncRNA_intronic
CAediting_1493298chr22_45332943_+ncRNA_intronic
CAediting_1493299chr22_45332952_+ncRNA_intronic
CAediting_1493300chr22_45332965_+ncRNA_intronic
CAediting_1493301chr22_45333014_+ncRNA_intronic
CAediting_1493302chr22_45333017_+ncRNA_intronic
CAediting_1493303chr22_45333019_+ncRNA_intronic
CAediting_1493304chr22_45333030_+ncRNA_intronic
CAediting_1493305chr22_45333252_+ncRNA_intronic
CAediting_1493306chr22_45333271_+ncRNA_intronic
CAediting_1493307chr22_45333276_+ncRNA_intronic
CAediting_1493308chr22_45333293_+ncRNA_intronic
CAediting_1493309chr22_45333316_+ncRNA_intronic
CAediting_1493310chr22_45333324_+ncRNA_intronic
CAediting_1493311chr22_45333325_+ncRNA_intronic
CAediting_1493312chr22_45333331_+ncRNA_intronic
CAediting_1493313chr22_45333344_+ncRNA_intronic
CAediting_1493314chr22_45333382_+ncRNA_intronic
CAediting_1493315chr22_45333404_+ncRNA_intronic
CAediting_1493316chr22_45333406_+ncRNA_intronic
CAediting_1493317chr22_45333419_+ncRNA_intronic
CAediting_1493318chr22_45333420_+ncRNA_intronic
CAediting_1493319chr22_45333428_+ncRNA_intronic
CAediting_1493320chr22_45333527_+ncRNA_intronic
CAediting_1493321chr22_45333553_+ncRNA_intronic
CAediting_1493322chr22_45333615_+ncRNA_intronic
CAediting_1493323chr22_45333619_+ncRNA_intronic
CAediting_1493324chr22_45333662_+ncRNA_intronic
CAediting_1493325chr22_45333723_+ncRNA_intronic
CAediting_1493326chr22_45333761_+ncRNA_intronic
CAediting_1493327chr22_45333766_+ncRNA_intronic
CAediting_1493328chr22_45333782_+ncRNA_intronic
CAediting_1493329chr22_45333785_+ncRNA_intronic
CAediting_1493330chr22_45333786_+ncRNA_intronic
CAediting_1493331chr22_45333796_+ncRNA_intronic
CAediting_1493332chr22_45333827_+ncRNA_intronic
CAediting_1493333chr22_45338253_+ncRNA_intronic
CAediting_1493334chr22_45338294_+ncRNA_intronic
CAediting_1493335chr22_45338307_+ncRNA_intronic
CAediting_1493336chr22_45338330_+ncRNA_intronic
CAediting_1493337chr22_45338347_+ncRNA_intronic
CAediting_1493338chr22_45338356_+ncRNA_intronic
CAediting_1493339chr22_45338359_+ncRNA_intronic
CAediting_1493340chr22_45338369_+ncRNA_intronic
CAediting_1493341chr22_45338396_+ncRNA_intronic
CAediting_1493342chr22_45338409_+ncRNA_intronic
CAediting_1493343chr22_45338412_+ncRNA_intronic
CAediting_1493344chr22_45338414_+ncRNA_intronic
CAediting_1493345chr22_45338474_+ncRNA_intronic
CAediting_1493346chr22_45338488_+ncRNA_intronic
CAediting_1493347chr22_45338489_+ncRNA_intronic
CAediting_1493348chr22_45338501_+ncRNA_intronic
CAediting_1493349chr22_45339141_+ncRNA_intronic
CAediting_1493350chr22_45339147_+ncRNA_intronic
CAediting_1493351chr22_45339149_+ncRNA_intronic
CAediting_1493352chr22_45339158_+ncRNA_intronic
CAediting_1493353chr22_45339176_+ncRNA_intronic
CAediting_1493354chr22_45339210_+ncRNA_intronic
CAediting_1493355chr22_45339218_+ncRNA_intronic
CAediting_1493356chr22_45339220_+ncRNA_intronic
CAediting_1493357chr22_45339231_+ncRNA_intronic
CAediting_1493358chr22_45339235_+ncRNA_intronic
CAediting_1493359chr22_45339236_+ncRNA_intronic
CAediting_1493360chr22_45339237_+ncRNA_intronic
CAediting_1493361chr22_45339238_+ncRNA_intronic
CAediting_1493362chr22_45339240_+ncRNA_intronic
CAediting_1493363chr22_45339249_+ncRNA_intronic
CAediting_1493364chr22_45339278_+ncRNA_intronic
CAediting_1493365chr22_45339284_+ncRNA_intronic
CAediting_1493366chr22_45339288_+ncRNA_intronic
CAediting_1493367chr22_45339301_+ncRNA_intronic
CAediting_1493368chr22_45339324_+ncRNA_intronic
CAediting_1493369chr22_45339349_+ncRNA_intronic
CAediting_1493370chr22_45339354_+ncRNA_intronic
CAediting_1493371chr22_45339356_+ncRNA_intronic
CAediting_1493372chr22_45340825_+ncRNA_exonic
CAediting_1493373chr22_45340827_+ncRNA_exonic
CAediting_1493374chr22_45340833_+ncRNA_exonic
CAediting_1493375chr22_45340841_+ncRNA_exonic
CAediting_1493376chr22_45340850_+ncRNA_exonic
CAediting_1493377chr22_45340852_+ncRNA_exonic
CAediting_1493378chr22_45340857_+ncRNA_exonic
CAediting_1493379chr22_45340863_+ncRNA_exonic
CAediting_1493380chr22_45340872_+ncRNA_exonic
CAediting_1493381chr22_45340877_+ncRNA_exonic
CAediting_1493382chr22_45340882_+ncRNA_exonic
CAediting_1493383chr22_45340889_+UTR3
CAediting_1493384chr22_45340902_+UTR3
CAediting_1493385chr22_45340903_+UTR3
CAediting_1493386chr22_45340920_+UTR3
CAediting_1493387chr22_45340932_+UTR3
CAediting_1493388chr22_45340942_+UTR3
CAediting_1493389chr22_45340944_+UTR3
CAediting_1493390chr22_45340952_+UTR3
CAediting_1493391chr22_45340955_+UTR3
CAediting_1493392chr22_45340958_+UTR3
CAediting_1493393chr22_45340964_+UTR3
CAediting_1493394chr22_45340968_+UTR3
CAediting_1493395chr22_45340969_+UTR3
CAediting_1493396chr22_45340977_+UTR3
CAediting_1493397chr22_45340983_+UTR3
CAediting_1493398chr22_45340986_+UTR3
CAediting_1493399chr22_45340988_+UTR3
CAediting_1493400chr22_45340994_+UTR3
CAediting_1493401chr22_45341000_+UTR3
CAediting_1493402chr22_45341003_+UTR3
CAediting_1493403chr22_45341012_+UTR3
CAediting_1493404chr22_45341025_+UTR3
CAediting_1493405chr22_45341042_+UTR3
CAediting_1493406chr22_45341046_+UTR3
CAediting_1493407chr22_45341064_+UTR3
CAediting_1493408chr22_45341065_+UTR3
CAediting_1493409chr22_45341077_+UTR3
CAediting_1493410chr22_45341079_+UTR3
CAediting_1493411chr22_45341083_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1493234chr22_45312409_+SINEAluAluSz6
CAediting_1493235chr22_45312418_+SINEAluAluSz6
CAediting_1493236chr22_45312434_+SINEAluAluSz6
CAediting_1493237chr22_45312458_+SINEAluAluSz6
CAediting_1493238chr22_45312489_+SINEAluAluSz6
CAediting_1493239chr22_45312491_+SINEAluAluSz6
CAediting_1493240chr22_45312494_+SINEAluAluSz6
CAediting_1493241chr22_45312567_+SINEAluAluSz6
CAediting_1493242chr22_45312595_+SINEAluAluSz6
CAediting_1493243chr22_45313557_+SINEAluAluSq2
CAediting_1493244chr22_45313585_+SINEAluAluSq2
CAediting_1493245chr22_45316079_+SINEAluAluSx
CAediting_1493246chr22_45316120_+SINEAluAluSx
CAediting_1493247chr22_45316169_+SINEAluAluSx
CAediting_1493248chr22_45317242_+SINEAluAluSq2
CAediting_1493249chr22_45317291_+SINEAluAluSq2
CAediting_1493250chr22_45320302_+SINEAluAluSc
CAediting_1493251chr22_45320309_+SINEAluAluSc
CAediting_1493252chr22_45320315_+SINEAluAluSc
CAediting_1493253chr22_45320562_+SINEAluAluJb
CAediting_1493254chr22_45321443_+SINEAluAluJo
CAediting_1493255chr22_45321583_+SINEAluAluJo
CAediting_1493256chr22_45321591_+SINEAluAluJo
CAediting_1493257chr22_45321606_+SINEAluAluJo
CAediting_1493258chr22_45321619_+SINEAluAluJo
CAediting_1493259chr22_45321675_+SINEAluAluJo
CAediting_1493260chr22_45321676_+SINEAluAluJo
CAediting_1493261chr22_45321687_+SINEAluAluJo
CAediting_1493262chr22_45321690_+SINEAluAluJo
CAediting_1493263chr22_45326733_+SINEAluAluSx
CAediting_1493264chr22_45328489_+SINEAluAluJb
CAediting_1493265chr22_45328528_+SINEAluAluJb
CAediting_1493266chr22_45328541_+SINEAluAluJb
CAediting_1493267chr22_45328557_+SINEAluAluJb
CAediting_1493268chr22_45328621_+SINEAluAluJb
CAediting_1493269chr22_45328695_+SINEAluAluJb
CAediting_1493270chr22_45328788_+SINEAluAluJb
CAediting_1493271chr22_45330229_+SINEAluFLAM_A
CAediting_1493272chr22_45330237_+SINEAluFLAM_A
CAediting_1493273chr22_45330294_+SINEAluFLAM_A
CAediting_1493274chr22_45330297_+SINEAluFLAM_A
CAediting_1493275chr22_45330307_+SINEAluFLAM_A
CAediting_1493276chr22_45331204_+SINEAluAluJb
CAediting_1493277chr22_45331220_+SINEAluAluJb
CAediting_1493278chr22_45331225_+SINEAluAluJb
CAediting_1493279chr22_45331226_+SINEAluAluJb
CAediting_1493280chr22_45331230_+SINEAluAluJb
CAediting_1493281chr22_45331270_+SINEAluAluJb
CAediting_1493282chr22_45331284_+SINEAluAluJb
CAediting_1493283chr22_45331419_+SINEAluAluJo
CAediting_1493284chr22_45331492_+SINEAluAluJo
CAediting_1493285chr22_45332803_+SINEAluAluSp
CAediting_1493286chr22_45332808_+SINEAluAluSp
CAediting_1493287chr22_45332824_+SINEAluAluSp
CAediting_1493288chr22_45332826_+SINEAluAluSp
CAediting_1493289chr22_45332840_+SINEAluAluSp
CAediting_1493290chr22_45332847_+SINEAluAluSp
CAediting_1493291chr22_45332861_+SINEAluAluSp
CAediting_1493292chr22_45332870_+SINEAluAluSp
CAediting_1493293chr22_45332873_+SINEAluAluSp
CAediting_1493294chr22_45332885_+SINEAluAluSp
CAediting_1493295chr22_45332910_+SINEAluAluSp
CAediting_1493296chr22_45332917_+SINEAluAluSp
CAediting_1493297chr22_45332926_+SINEAluAluSp
CAediting_1493298chr22_45332943_+SINEAluAluSp
CAediting_1493299chr22_45332952_+SINEAluAluSp
CAediting_1493300chr22_45332965_+SINEAluAluSp
CAediting_1493301chr22_45333014_+SINEAluAluSp
CAediting_1493302chr22_45333017_+SINEAluAluSp
CAediting_1493303chr22_45333019_+SINEAluAluSp
CAediting_1493304chr22_45333030_+SINEAluAluSp
CAediting_1493305chr22_45333252_+SINEAluAluJr
CAediting_1493306chr22_45333271_+SINEAluAluJr
CAediting_1493307chr22_45333276_+SINEAluAluJr
CAediting_1493308chr22_45333293_+SINEAluAluJr
CAediting_1493309chr22_45333316_+SINEAluAluJr
CAediting_1493310chr22_45333324_+SINEAluAluJr
CAediting_1493311chr22_45333325_+SINEAluAluJr
CAediting_1493312chr22_45333331_+SINEAluAluJr
CAediting_1493313chr22_45333344_+SINEAluAluJr
CAediting_1493314chr22_45333382_+SINEAluAluJr
CAediting_1493315chr22_45333404_+SINEAluAluY
CAediting_1493316chr22_45333406_+SINEAluAluY
CAediting_1493317chr22_45333419_+SINEAluAluY
CAediting_1493318chr22_45333420_+SINEAluAluY
CAediting_1493319chr22_45333428_+SINEAluAluY
CAediting_1493320chr22_45333527_+SINEAluAluY
CAediting_1493321chr22_45333553_+SINEAluAluY
CAediting_1493322chr22_45333615_+SINEAluAluY
CAediting_1493323chr22_45333619_+SINEAluAluY
CAediting_1493324chr22_45333662_+SINEAluAluY
CAediting_1493325chr22_45333723_+SINEAluAluJr
CAediting_1493326chr22_45333761_+SINEAluAluJr
CAediting_1493327chr22_45333766_+SINEAluAluJr
CAediting_1493328chr22_45333782_+SINEAluAluJr
CAediting_1493329chr22_45333785_+SINEAluAluJr
CAediting_1493330chr22_45333786_+SINEAluAluJr
CAediting_1493331chr22_45333796_+SINEAluAluJr
CAediting_1493332chr22_45333827_+SINEAluAluJr
CAediting_1493333chr22_45338253_+SINEAluAluSx3
CAediting_1493334chr22_45338294_+SINEAluAluSx3
CAediting_1493335chr22_45338307_+SINEAluAluSx3
CAediting_1493336chr22_45338330_+SINEAluAluSx3
CAediting_1493337chr22_45338347_+SINEAluAluSx3
CAediting_1493338chr22_45338356_+SINEAluAluSx3
CAediting_1493339chr22_45338359_+SINEAluAluSx3
CAediting_1493340chr22_45338369_+SINEAluAluSx3
CAediting_1493341chr22_45338396_+SINEAluAluSx3
CAediting_1493342chr22_45338409_+SINEAluAluSx3
CAediting_1493343chr22_45338412_+SINEAluAluSx3
CAediting_1493344chr22_45338414_+SINEAluAluSx3
CAediting_1493345chr22_45338474_+SINEAluAluSx3
CAediting_1493346chr22_45338488_+SINEAluAluSx3
CAediting_1493347chr22_45338489_+SINEAluAluSx3
CAediting_1493348chr22_45338501_+SINEAluAluSx3
CAediting_1493349chr22_45339141_+SINEAluAluSx1
CAediting_1493350chr22_45339147_+SINEAluAluSx1
CAediting_1493351chr22_45339149_+SINEAluAluSx1
CAediting_1493352chr22_45339158_+SINEAluAluSx1
CAediting_1493353chr22_45339176_+SINEAluAluSx1
CAediting_1493354chr22_45339210_+SINEAluAluSx1
CAediting_1493355chr22_45339218_+SINEAluAluSx1
CAediting_1493356chr22_45339220_+SINEAluAluSx1
CAediting_1493357chr22_45339231_+SINEAluAluSx1
CAediting_1493358chr22_45339235_+SINEAluAluSx1
CAediting_1493359chr22_45339236_+SINEAluAluSx1
CAediting_1493360chr22_45339237_+SINEAluAluSx1
CAediting_1493361chr22_45339238_+SINEAluAluSx1
CAediting_1493362chr22_45339240_+SINEAluAluSx1
CAediting_1493363chr22_45339249_+SINEAluAluSx1
CAediting_1493364chr22_45339278_+SINEAluAluSx1
CAediting_1493365chr22_45339284_+SINEAluAluSx1
CAediting_1493366chr22_45339288_+SINEAluAluSx1
CAediting_1493367chr22_45339301_+SINEAluAluSx1
CAediting_1493368chr22_45339324_+SINEAluAluSx1
CAediting_1493369chr22_45339349_+SINEAluAluSx1
CAediting_1493370chr22_45339354_+SINEAluAluSx1
CAediting_1493371chr22_45339356_+SINEAluAluSx1
CAediting_1493372chr22_45340825_+SINEAluAluSx1
CAediting_1493373chr22_45340827_+SINEAluAluSx1
CAediting_1493374chr22_45340833_+SINEAluAluSx1
CAediting_1493375chr22_45340841_+SINEAluAluSx1
CAediting_1493376chr22_45340850_+SINEAluAluSx1
CAediting_1493377chr22_45340852_+SINEAluAluSx1
CAediting_1493378chr22_45340857_+SINEAluAluSx1
CAediting_1493379chr22_45340863_+SINEAluAluSx1
CAediting_1493380chr22_45340872_+SINEAluAluSx1
CAediting_1493381chr22_45340877_+SINEAluAluSx1
CAediting_1493382chr22_45340882_+SINEAluAluSx1
CAediting_1493383chr22_45340889_+SINEAluAluSx1
CAediting_1493384chr22_45340902_+SINEAluAluSx1
CAediting_1493385chr22_45340903_+SINEAluAluSx1
CAediting_1493386chr22_45340920_+SINEAluAluSx1
CAediting_1493387chr22_45340932_+SINEAluAluSx1
CAediting_1493388chr22_45340942_+SINEAluAluSx1
CAediting_1493389chr22_45340944_+SINEAluAluSx1
CAediting_1493390chr22_45340952_+SINEAluAluSx1
CAediting_1493391chr22_45340955_+SINEAluAluSx1
CAediting_1493392chr22_45340958_+SINEAluAluSx1
CAediting_1493393chr22_45340964_+SINEAluAluSx1
CAediting_1493394chr22_45340968_+SINEAluAluSx1
CAediting_1493395chr22_45340969_+SINEAluAluSx1
CAediting_1493396chr22_45340977_+SINEAluAluSx1
CAediting_1493397chr22_45340983_+SINEAluAluSx1
CAediting_1493398chr22_45340986_+SINEAluAluSx1
CAediting_1493399chr22_45340988_+SINEAluAluSx1
CAediting_1493400chr22_45340994_+SINEAluAluSx1
CAediting_1493401chr22_45341000_+SINEAluAluSx1
CAediting_1493402chr22_45341003_+SINEAluAluSx1
CAediting_1493403chr22_45341012_+SINEAluAluSx1
CAediting_1493404chr22_45341025_+SINEAluAluSx1
CAediting_1493405chr22_45341042_+SINEAluAluSx1
CAediting_1493406chr22_45341046_+SINEAluAluSx1
CAediting_1493407chr22_45341064_+SINEAluAluSx1
CAediting_1493408chr22_45341065_+SINEAluAluSx1
CAediting_1493409chr22_45341077_+SINEAluAluSx1
CAediting_1493410chr22_45341079_+SINEAluAluSx1
CAediting_1493411chr22_45341083_+SINEAluAluSx1

Top

RNA A-to-I editing events in the alternative splicing sites for FAM118A

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1493255chr22_45321583_+45321581:453216033SS0+18iAAATTTTTTTATTCTTTGTAGAG-15.17AAGTTTTTTTATTCTTTGTAGAG-15.86
ESCAediting_1493256chr22_45321591_+45321581:453216033SS0+10iAAATTTTTTTATTCTTTGTAGAG-15.17AAATTTTTTTGTTCTTTGTAGAG-14.26

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000100376.10.FAM118A.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000100376.10.FAM118A.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FAM118A

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
BLCA.CAediting_1493382.ENSG00000100376.FAM118A.png
Soverview

Top

Protein coding region RNA A-to-I editings for FAM118A

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for FAM118A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1493375chr22_45340841_+ENSG00000100376.10ENST00000216214hsa-miR-1273c45340836453408416mer4534082145340842144.00-25.32
CAediting_1493375chr22_45340841_+ENSG00000100376.10ENST00000216214hsa-miR-1285-3p45340840453408456mer4534082545340846160.00-31.86
CAediting_1493375chr22_45340841_+ENSG00000100376.10ENST00000216214hsa-miR-1285-3p45340840453408456mer4534082545340846160.00-31.86
CAediting_1493375chr22_45340841_+ENSG00000100376.10ENST00000216214hsa-miR-448645340839453408457mer-m84534082845340846146.00-18.47
CAediting_1493379chr22_45340863_+ENSG00000100376.10ENST00000216214hsa-miR-767-5p45340858453408636mer4534084245340864141.00-19.91
CAediting_1493383chr22_45340889_+ENSG00000100376.10ENST00000216214hsa-miR-10400-5p45340887453408937mer-m84534087445340894166.00-29.22
CAediting_1493383chr22_45340889_+ENSG00000100376.10ENST00000216214hsa-miR-396045340886453408927mer-m84534087445340893157.00-33.65
CAediting_1493383chr22_45340889_+ENSG00000100376.10ENST00000216214hsa-miR-446745340887453408937mer-m84534087345340894162.00-26.25
CAediting_1493383chr22_45340889_+ENSG00000100376.10ENST00000216214hsa-miR-807245340886453408927mer-m84534087345340893151.00-31.75
CAediting_1493385chr22_45340903_+ENSG00000100376.10ENST00000216214hsa-miR-3622a-3p45340899453409068mer-1a4534088745340906151.00-21.49
CAediting_1493385chr22_45340903_+ENSG00000100376.10ENST00000216214hsa-miR-3622b-3p45340899453409068mer-1a4534088645340906161.00-27.60
CAediting_1493385chr22_45340903_+ENSG00000100376.10ENST00000216214hsa-miR-6751-3p45340896453409027mer-m84534088345340903141.00-13.15
CAediting_1493387chr22_45340932_+ENSG00000100376.10ENST00000216214hsa-miR-4691-3p45340929453409357mer-m84534090945340936150.00-26.36
CAediting_1493390chr22_45340952_+ENSG00000100376.10ENST00000216214hsa-miR-473045340948453409547mer-m84534093045340955153.00-26.56
CAediting_1493394chr22_45340968_+ENSG00000100376.10ENST00000216214hsa-miR-1207-3p45340961453409688mer-1a4534095145340968144.00-14.68
CAediting_1493394chr22_45340968_+ENSG00000100376.10ENST00000216214hsa-miR-34a-3p45340964453409707mer-m84534094945340971145.00-10.17
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-4661-5p45340963453409697mer-m84534095145340970145.00-14.65
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-548ae-3p45340967453409737mer-m84534095445340974141.00-6.06
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-548ae-3p45340967453409737mer-m84534095445340974141.00-6.06
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-548ah-3p45340967453409737mer-m84534095245340974143.00-6.06
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-548aj-3p45340967453409737mer-m84534095445340974141.00-6.96
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-548aj-3p45340967453409737mer-m84534095445340974141.00-6.96
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-548am-3p45340967453409737mer-m84534095245340974143.00-6.06
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-548aq-3p45340967453409737mer-m84534095345340974141.00-6.06
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-548j-3p45340967453409737mer-m84534095445340974141.00-6.06
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-548x-3p45340967453409737mer-m84534095545340974141.00-6.96
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-548x-3p45340967453409737mer-m84534095545340974141.00-6.96
CAediting_1493395chr22_45340969_+ENSG00000100376.10ENST00000216214hsa-miR-7844-5p45340965453409717mer-m84534095145340972160.00-18.30
CAediting_1493396chr22_45340977_+ENSG00000100376.10ENST00000216214hsa-miR-3613-3p45340970453409767mer-m84534095445340977154.00-9.56
CAediting_1493408chr22_45341065_+ENSG00000100376.10ENST00000216214hsa-miR-3189-3p45341059453410657mer-m84534104345341066149.00-20.43
CAediting_1493408chr22_45341065_+ENSG00000100376.10ENST00000216214hsa-miR-6813-3p45341060453410667mer-m84534104745341067140.00-15.63
CAediting_1493265chr22_45328528_+ENSG00000100376.10ENST00000405673hsa-miR-10392-3p45328526453285338mer-1a4532851045328533147.00-25.81
CAediting_1493265chr22_45328528_+ENSG00000100376.10ENST00000405673hsa-miR-361-3p45328521453285277mer-m84532850645328528145.00-25.31
CAediting_1493377chr22_45340852_+ENSG00000100376.10ENST00000216214hsa-miR-10a-5p45340847453408537mer-m84534083245340854140.00-15.98
CAediting_1493377chr22_45340852_+ENSG00000100376.10ENST00000216214hsa-miR-10b-5p45340847453408537mer-m84534083245340854140.00-15.98
CAediting_1493377chr22_45340852_+ENSG00000100376.10ENST00000216214hsa-miR-339-5p45340846453408527mer-m84534083145340853150.00-22.86
CAediting_1493377chr22_45340852_+ENSG00000100376.10ENST00000216214hsa-miR-3620-3p45340848453408547mer-m84534083645340855144.00-16.04
CAediting_1493377chr22_45340852_+ENSG00000100376.10ENST00000216214hsa-miR-6748-3p45340845453408517mer-m84534083345340852141.00-19.78
CAediting_1493380chr22_45340872_+ENSG00000100376.10ENST00000216214hsa-miR-429345340868453408747mer-m84534085945340875142.00-10.29
CAediting_1493380chr22_45340872_+ENSG00000100376.10ENST00000216214hsa-miR-432445340866453408727mer-m84534085445340873154.00-13.21
CAediting_1493380chr22_45340872_+ENSG00000100376.10ENST00000216214hsa-miR-544b45340867453408726mer4534085145340873150.00-23.13
CAediting_1493392chr22_45340958_+ENSG00000100376.10ENST00000216214hsa-miR-56445340955453409617mer-m84534094445340962150.00-20.14
CAediting_1493399chr22_45340988_+ENSG00000100376.10ENST00000216214hsa-miR-652-5p45340984453409907mer-m84534096745340991147.00-17.32
CAediting_1493400chr22_45340994_+ENSG00000100376.10ENST00000216214hsa-miR-6771-3p45340991453409977mer-m84534097745340998154.00-16.90
CAediting_1493400chr22_45340994_+ENSG00000100376.10ENST00000216214hsa-miR-6793-3p45340988453409947mer-m84534097745340995144.00-17.94
CAediting_1493402chr22_45341003_+ENSG00000100376.10ENST00000216214hsa-miR-433-5p45340997453410037mer-m84534098345341004156.00-19.94
CAediting_1493405chr22_45341042_+ENSG00000100376.10ENST00000216214hsa-miR-313845341041453410466mer4534102245341047140.00-26.91
CAediting_1493405chr22_45341042_+ENSG00000100376.10ENST00000216214hsa-miR-4776-5p45341039453410457mer-m84534102345341046159.00-28.28
CAediting_1493405chr22_45341042_+ENSG00000100376.10ENST00000216214hsa-miR-4776-5p45341039453410457mer-m84534102345341046159.00-28.28
CAediting_1493405chr22_45341042_+ENSG00000100376.10ENST00000216214hsa-miR-4800-5p45341040453410467mer-m84534102545341047146.00-21.77
CAediting_1493406chr22_45341046_+ENSG00000100376.10ENST00000216214hsa-miR-476745341044453410507mer-m84534102645341051146.00-22.13
CAediting_1493407chr22_45341064_+ENSG00000100376.10ENST00000216214hsa-miR-32645341059453410657mer-m84534104745341066140.00-14.14
CAediting_1493407chr22_45341064_+ENSG00000100376.10ENST00000216214hsa-miR-330-5p45341059453410657mer-m84534104545341066140.00-22.24
CAediting_1493407chr22_45341064_+ENSG00000100376.10ENST00000216214hsa-miR-431445341058453410647mer-m84534104845341065140.00-18.79
CAediting_1493407chr22_45341064_+ENSG00000100376.10ENST00000216214hsa-miR-514a-5p45341060453410667mer-m84534104745341067154.00-19.80
CAediting_1493407chr22_45341064_+ENSG00000100376.10ENST00000216214hsa-miR-514a-5p45341060453410667mer-m84534104745341067154.00-19.80
CAediting_1493407chr22_45341064_+ENSG00000100376.10ENST00000216214hsa-miR-514a-5p45341060453410667mer-m84534104745341067154.00-19.80
CAediting_1493409chr22_45341077_+ENSG00000100376.10ENST00000216214hsa-miR-106a-3p45341073453410786mer4534105845341079141.00-21.13
CAediting_1493373chr22_45340827_+ENSG00000100376.10ENST00000216214hsa-miR-4725-5p45340823453408297mer-m84534081045340830140.00-15.44
CAediting_1493373chr22_45340827_+ENSG00000100376.10ENST00000216214hsa-miR-4732-3p45340821453408277mer-m84534080845340828140.00-14.24
CAediting_1493373chr22_45340827_+ENSG00000100376.10ENST00000216214hsa-miR-504-5p45340823453408297mer-m84534080945340830143.00-17.40

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1493375chr22_45340841_+ENSG00000100376.10ENST00000216214hsa-miR-126245340838453408447mer-m84534082345340845144-17.12
CAediting_1493393chr22_45340964_+ENSG00000100376.10ENST00000216214hsa-miR-1285-3p45340958453409647mer-m84534094545340965146-19.19
CAediting_1493393chr22_45340964_+ENSG00000100376.10ENST00000216214hsa-miR-1285-3p45340958453409647mer-m84534094545340965146-19.19
CAediting_1493382chr22_45340882_+ENSG00000100376.10ENST00000216214hsa-miR-17-3p45340876453408827mer-m84534086245340883150-19.38
CAediting_1493372chr22_45340825_+ENSG00000100376.10ENST00000216214hsa-miR-301a-5p45340821453408277mer-m84534080745340828148-14.22
CAediting_1493373chr22_45340827_+ENSG00000100376.10ENST00000216214hsa-miR-301a-5p45340821453408277mer-m84534080745340828148-14.22
CAediting_1493372chr22_45340825_+ENSG00000100376.10ENST00000216214hsa-miR-301b-5p45340821453408277mer-m84534080745340828140-12.25
CAediting_1493373chr22_45340827_+ENSG00000100376.10ENST00000216214hsa-miR-301b-5p45340821453408277mer-m84534080745340828140-12.25
CAediting_1493390chr22_45340952_+ENSG00000100376.10ENST00000216214hsa-miR-316545340948453409547mer-1a4534093445340954146-24.98
CAediting_1493406chr22_45341046_+ENSG00000100376.10ENST00000216214hsa-miR-316545341041453410477mer-m84534102945341048145-16.11
CAediting_1493381chr22_45340877_+ENSG00000100376.10ENST00000216214hsa-miR-317445340873453408786mer4534085745340879151-22.2
CAediting_1493403chr22_45341012_+ENSG00000100376.10ENST00000216214hsa-miR-3190-5p45341006453410127mer-m84534099445341013147-18.34
CAediting_1493378chr22_45340857_+ENSG00000100376.10ENST00000216214hsa-miR-324-3p45340854453408607mer-m84534083945340861155-20.39
CAediting_1493372chr22_45340825_+ENSG00000100376.10ENST00000216214hsa-miR-345-5p45340819453408268mer-1a4534080545340826140-15.46
CAediting_1493392chr22_45340958_+ENSG00000100376.10ENST00000216214hsa-miR-3622b-5p45340955453409617mer-m84534094445340962143-20.72
CAediting_1493376chr22_45340850_+ENSG00000100376.10ENST00000216214hsa-miR-3664-5p45340847453408537mer-m84534083345340854151-17.26
CAediting_1493377chr22_45340852_+ENSG00000100376.10ENST00000216214hsa-miR-3664-5p45340847453408537mer-m84534083345340854151-17.26
CAediting_1493392chr22_45340958_+ENSG00000100376.10ENST00000216214hsa-miR-425345340956453409638mer-1a4534094645340963140-17.78
CAediting_1493386chr22_45340920_+ENSG00000100376.10ENST00000216214hsa-miR-447845340917453409237mer-m84534090945340924149-25.05
CAediting_1493372chr22_45340825_+ENSG00000100376.10ENST00000216214hsa-miR-452245340823453408297mer-m84534081045340830148-12.83
CAediting_1493373chr22_45340827_+ENSG00000100376.10ENST00000216214hsa-miR-452245340823453408297mer-m84534081045340830148-12.83
CAediting_1493386chr22_45340920_+ENSG00000100376.10ENST00000216214hsa-miR-4649-3p45340914453409207mer-m84534090145340921140-14.11
CAediting_1493372chr22_45340825_+ENSG00000100376.10ENST00000216214hsa-miR-4714-5p45340822453408287mer-m84534080845340829147-12.58
CAediting_1493373chr22_45340827_+ENSG00000100376.10ENST00000216214hsa-miR-4714-5p45340822453408287mer-m84534080845340829147-12.58
CAediting_1493379chr22_45340863_+ENSG00000100376.10ENST00000216214hsa-miR-487b-3p45340860453408667mer-m84534084645340867142-13.48
CAediting_1493403chr22_45341012_+ENSG00000100376.10ENST00000216214hsa-miR-548s45341005453410117mer-m84534099145341012147-12.12
CAediting_1493387chr22_45340932_+ENSG00000100376.10ENST00000216214hsa-miR-569045340929453409357mer-m84534091645340936145-16.75
CAediting_1493398chr22_45340986_+ENSG00000100376.10ENST00000216214hsa-miR-61845340984453409907mer-m84534096945340991150-11.51
CAediting_1493399chr22_45340988_+ENSG00000100376.10ENST00000216214hsa-miR-61845340984453409907mer-m84534096945340991150-11.51
CAediting_1493382chr22_45340882_+ENSG00000100376.10ENST00000216214hsa-miR-64745340879453408857mer-m84534086545340886155-17
CAediting_1493410chr22_45341079_+ENSG00000100376.10ENST00000216214hsa-miR-6514-3p45341076453410827mer-m84534106045341083151-17.21
CAediting_1493411chr22_45341083_+ENSG00000100376.10ENST00000216214hsa-miR-6514-3p45341076453410827mer-m84534106045341083151-17.21
CAediting_1493375chr22_45340841_+ENSG00000100376.10ENST00000216214hsa-miR-6736-5p45340838453408447mer-m84534082545340845143-20.94
CAediting_1493406chr22_45341046_+ENSG00000100376.10ENST00000216214hsa-miR-674545341042453410487mer-m84534102545341049146-22.31
CAediting_1493406chr22_45341046_+ENSG00000100376.10ENST00000216214hsa-miR-6756-5p45341043453410486mer4534102545341049144-27.82
CAediting_1493378chr22_45340857_+ENSG00000100376.10ENST00000216214hsa-miR-6807-3p45340853453408586mer4534083745340859147-26.09
CAediting_1493374chr22_45340833_+ENSG00000100376.10ENST00000216214hsa-miR-6864-3p45340826453408327mer-m84534081245340833145-17.02
CAediting_1493386chr22_45340920_+ENSG00000100376.10ENST00000216214hsa-miR-7160-5p45340915453409217mer-m84534090245340922146-17.63
CAediting_1493374chr22_45340833_+ENSG00000100376.10ENST00000216214hsa-miR-75945340831453408377mer-m84534081845340838143-19.31
CAediting_1493401chr22_45341000_+ENSG00000100376.10ENST00000216214hsa-miR-7855-5p45340997453410026mer4534098445341003148-20.02
CAediting_1493402chr22_45341003_+ENSG00000100376.10ENST00000216214hsa-miR-7855-5p45340997453410026mer4534098445341003148-20.02
CAediting_1493405chr22_45341042_+ENSG00000100376.10ENST00000216214hsa-miR-805645341041453410466mer4534102845341047142-18.61
CAediting_1493406chr22_45341046_+ENSG00000100376.10ENST00000216214hsa-miR-805645341041453410466mer4534102845341047142-18.61
CAediting_1493390chr22_45340952_+ENSG00000100376.10ENST00000216214hsa-miR-807145340947453409548mer-1a4534093245340954141-16.35
CAediting_1493390chr22_45340952_+ENSG00000100376.10ENST00000216214hsa-miR-807145340947453409548mer-1a4534093245340954141-16.35
CAediting_1493407chr22_45341064_+ENSG00000100376.10ENST00000216214hsa-miR-887-5p45341057453410648mer-1a4534104445341064147-13.95
CAediting_1493267chr22_45328557_+ENSG00000100376.10ENST00000405673hsa-miR-10400-3p45328550453285567mer-m84532853645328557141-20.86
CAediting_1493268chr22_45328621_+ENSG00000100376.10ENST00000405673hsa-miR-118245328618453286247mer-m84532860345328625146-19.28
CAediting_1493267chr22_45328557_+ENSG00000100376.10ENST00000405673hsa-miR-1343-3p45328553453285597mer-m84532853845328560150-26.35
CAediting_1493268chr22_45328621_+ENSG00000100376.10ENST00000405673hsa-miR-193a-5p45328617453286237mer-m84532860345328624140-13.55
CAediting_1493268chr22_45328621_+ENSG00000100376.10ENST00000405673hsa-miR-200c-5p45328615453286217mer-m84532860045328622145-13.13
CAediting_1493265chr22_45328528_+ENSG00000100376.10ENST00000405673hsa-miR-2355-5p45328521453285277mer-m84532850945328528149-19.41
CAediting_1493269chr22_45328695_+ENSG00000100376.10ENST00000405673hsa-miR-26a-1-3p45328691453286977mer-m84532868045328698143-11.37
CAediting_1493269chr22_45328695_+ENSG00000100376.10ENST00000405673hsa-miR-26a-2-3p45328691453286977mer-m84532867945328698142-13.57
CAediting_1493267chr22_45328557_+ENSG00000100376.10ENST00000405673hsa-miR-467445328550453285567mer-m84532853745328557147-23.06
CAediting_1493266chr22_45328541_+ENSG00000100376.10ENST00000405673hsa-miR-500a-5p45328540453285456mer4532852545328546149-24.65
CAediting_1493266chr22_45328541_+ENSG00000100376.10ENST00000405673hsa-miR-532-3p45328535453285417mer-m84532852445328542146-27.02
CAediting_1493266chr22_45328541_+ENSG00000100376.10ENST00000405673hsa-miR-6749-3p45328537453285437mer-m84532852545328544154-26
CAediting_1493265chr22_45328528_+ENSG00000100376.10ENST00000405673hsa-miR-6778-3p45328524453285307mer-m84532851145328531142-15.63
CAediting_1493267chr22_45328557_+ENSG00000100376.10ENST00000405673hsa-miR-6783-3p45328553453285597mer-m84532853445328560152-27.15
CAediting_1493265chr22_45328528_+ENSG00000100376.10ENST00000405673hsa-miR-6791-3p45328525453285306mer4532851145328531142-22.14
CAediting_1493265chr22_45328528_+ENSG00000100376.10ENST00000405673hsa-miR-6829-3p45328525453285306mer4532851245328531147-21.67
CAediting_1493267chr22_45328557_+ENSG00000100376.10ENST00000405673hsa-miR-939-3p45328552453285598mer-1a4532853745328559146-23.71

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000100376.10ENST00000216214hsa-miR-624-3p45341779453417846mer4534176645341785141-21.84
CAediting_980496chr14_31014685_-ENSG00000100376.10ENST00000405673hsa-miR-624-3p45328767453287737mer-m84532875445328774149-14.77
CAediting_1229413chr17_67471544_+ENSG00000100376.10ENST00000216214hsa-miR-548aa45341730453417378mer-1a4534171145341737142-10.52
CAediting_1160181chr17_7017644_-ENSG00000100376.10ENST00000216214hsa-miR-195-3p45341356453413627mer-m84534134145341363169-22.12
CAediting_86358chr1_109598906_+ENSG00000100376.10ENST00000216214hsa-miR-197-5p45341042453410487mer-m84534102145341049142-29.57
CAediting_77128chr1_85133844_+ENSG00000100376.10ENST00000216214hsa-miR-4423-3p45340455453404628mer-1a4534044245340462140-12.47
CAediting_228905chr2_188297554_+ENSG00000100376.10ENST00000216214hsa-miR-561-3p45341023453410286mer4534100845341029145-16.26
CAediting_396018chr5_1062918_-ENSG00000100376.10ENST00000216214hsa-miR-463545340549453405557mer-m84534053545340556148-22.15
CAediting_396018chr5_1062918_-ENSG00000100376.10ENST00000216214hsa-miR-463545340867453408726mer4534085445340873142-19.56
CAediting_1054808chr15_66496985_-ENSG00000100376.10ENST00000405673hsa-miR-451245329088453290958mer-1a4532907445329095140-14.26
CAediting_1524209chrX_134546392_-ENSG00000100376.10ENST00000216214hsa-miR-503-5p45341620453416256mer4534160445341626141-24.43

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1160181chr17_7017644_-ENSG00000100376.10ENST00000216214hsa-miR-195-3p45341303453413086mer4534128645341309151-14.33
CAediting_228905chr2_188297554_+ENSG00000100376.10ENST00000216214hsa-miR-561-3p45341877453418837mer-m84534186345341884141-5.07
CAediting_396018chr5_1062918_-ENSG00000100376.10ENST00000405673hsa-miR-463545329223453292297mer-1a4532920945329229143-14.34

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for FAM118A

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for FAM118A

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_1493271chr22_45330229_+7.72091856310685e-050.467006797314534....
BRCACAediting_1493382chr22_45340882_+0.01422074233588140.187742157159876....
BLCACAediting_1493385chr22_45340903_+..0.006246883597901040.305148115685779..
LIHCCAediting_1493398chr22_45340986_+....0.0375267439799480.207292902831352
STADCAediting_1493398chr22_45340986_+....0.0133654126041650.163630379249115
SKCMCAediting_1493398chr22_45340986_+..0.0369328636797240.140136423321061..
TGCTCAediting_1493398chr22_45340986_+..0.01143660195909850.255816187353059..

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Relation with cancer stages for FAM118A

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_1493386chr22_45340920_+0.0440574817547683-0.267741166086862
COADpathologic_stageCAediting_1493398chr22_45340986_+0.0454627824569939-0.155018836819994
OVclinical_stageCAediting_1493375chr22_45340841_+0.04774253171994590.130971822632415
READpathologic_stageCAediting_1493398chr22_45340986_+0.0113489334075797-0.336000958965839
SKCMpathologic_stageCAediting_1493385chr22_45340903_+0.0175405119935818-0.283150051627604

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Relation with survival for FAM118A

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
OVCAediting_1493398chr22_45340986_+0.007241958029105540.0070500713.8995

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RelatedDrugs for FAM118A

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for FAM118A

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource