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Editing gene: ZSCAN2 (CAeditome ID:54993)

Gene summary for ZSCAN2

Gene summary

Gene information	Gene symbol	ZSCAN2
	Gene ID	54993
	Gene name	zinc finger and SCAN domain containing 2
	Synonyms	ZFP29\|ZNF854
	Cytomap	15q25.2
	Type of gene	protein-coding
	Description	zinc finger and SCAN domain-containing protein 2zfp-29zinc finger protein 29 homologzinc finger protein 854
	Modification date	20210518
	UniProtAcc	Q7Z7L9
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ZSCAN2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000176371.12

RNA A-to-I editing events in Cancer.

CAediting_1066193(84609440, +), CAediting_1066194(84611597, +), CAediting_1066195(84611601, +), CAediting_1066196(84618141, +), CAediting_1066197(84618149, +), CAediting_1066198(84618584, +), CAediting_1066199(84618786, +), CAediting_1066200(84618832, +), CAediting_1066201(84619283, +), CAediting_1066202(84619309, +), CAediting_1066203(84619315, +), CAediting_1066204(84621627, +), CAediting_1066205(84623240, +), CAediting_1066206(84623243, +), CAediting_1066207(84623253, +), CAediting_1066208(84623268, +), CAediting_1066209(84623277, +), CAediting_1066210(84623291, +), CAediting_1066211(84623299, +), CAediting_1066212(84623303, +), CAediting_1066213(84623331, +), CAediting_1066214(84623353, +), CAediting_1066215(84623366, +), CAediting_1066216(84624089, +), CAediting_1066217(84624167, +), CAediting_1066218(84624172, +), CAediting_1066219(84624220, +), CAediting_1066220(84624230, +), CAediting_1066221(84625578, +), CAediting_1066222(84625586, +), CAediting_1066223(84626363, +), CAediting_1066224(84626540, +), CAediting_1066225(84626965, +), CAediting_1066226(84627066, +), CAediting_1066227(84627067, +), CAediting_1066228(84627080, +), CAediting_1066229(84627307, +), CAediting_1066230(84627321, +), CAediting_1066231(84627470, +), CAediting_1066232(84627551, +),

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RNA editing positional annotations for ZSCAN2 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1066204	chr15_84621627_+	nonsynonymous SNV	ENST00000327179.6	c.A1429G	p.T477A	D	B	N
CAediting_1066204	chr15_84621627_+	nonsynonymous SNV	ENST00000358472.3	c.A982G	p.T328A	D	B	N
CAediting_1066204	chr15_84621627_+	nonsynonymous SNV	ENST00000448803.5	c.A1432G	p.T478A	D	B	N
CAediting_1066204	chr15_84621627_+	nonsynonymous SNV	ENST00000540894.4	c.A1432G	p.T478A	D	B	N
CAediting_1066204	chr15_84621627_+	nonsynonymous SNV	ENST00000546148.4	c.A1432G	p.T478A	D	B	N
CAediting_1066210	chr15_84623291_+	nonsynonymous SNV	ENST00000541040.4	c.A593G	p.H198R	D	B	N
CAediting_1066211	chr15_84623299_+	nonsynonymous SNV	ENST00000541040.4	c.A601G	p.S201G	D	B	N
CAediting_1066212	chr15_84623303_+	nonsynonymous SNV	ENST00000541040.4	c.A605G	p.Q202R	D	B	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1066193	chr15_84609440_+	intronic
CAediting_1066194	chr15_84611597_+	intronic
CAediting_1066195	chr15_84611601_+	intronic
CAediting_1066196	chr15_84618141_+	intronic
CAediting_1066197	chr15_84618149_+	intronic
CAediting_1066198	chr15_84618584_+	intronic
CAediting_1066199	chr15_84618786_+	intronic
CAediting_1066200	chr15_84618832_+	intronic
CAediting_1066201	chr15_84619283_+	intronic
CAediting_1066202	chr15_84619309_+	intronic
CAediting_1066203	chr15_84619315_+	intronic
CAediting_1066204	chr15_84621627_+	exonic
CAediting_1066205	chr15_84623240_+	ncRNA_intronic
CAediting_1066206	chr15_84623243_+	ncRNA_intronic
CAediting_1066207	chr15_84623253_+	ncRNA_intronic
CAediting_1066208	chr15_84623268_+	ncRNA_intronic
CAediting_1066209	chr15_84623277_+	exonic
CAediting_1066210	chr15_84623291_+	exonic
CAediting_1066211	chr15_84623299_+	exonic
CAediting_1066212	chr15_84623303_+	exonic
CAediting_1066213	chr15_84623331_+	exonic
CAediting_1066214	chr15_84623353_+	ncRNA_intronic
CAediting_1066215	chr15_84623366_+	ncRNA_intronic
CAediting_1066216	chr15_84624089_+	ncRNA_intronic
CAediting_1066217	chr15_84624167_+	ncRNA_intronic
CAediting_1066218	chr15_84624172_+	ncRNA_intronic
CAediting_1066219	chr15_84624220_+	ncRNA_intronic
CAediting_1066220	chr15_84624230_+	ncRNA_intronic
CAediting_1066221	chr15_84625578_+	ncRNA_intronic
CAediting_1066222	chr15_84625586_+	ncRNA_intronic
CAediting_1066223	chr15_84626363_+	ncRNA_intronic
CAediting_1066224	chr15_84626540_+	ncRNA_intronic
CAediting_1066225	chr15_84626965_+	ncRNA_intronic
CAediting_1066226	chr15_84627066_+	ncRNA_intronic
CAediting_1066227	chr15_84627067_+	ncRNA_intronic
CAediting_1066228	chr15_84627080_+	ncRNA_intronic
CAediting_1066229	chr15_84627307_+	ncRNA_intronic
CAediting_1066230	chr15_84627321_+	ncRNA_intronic
CAediting_1066231	chr15_84627470_+	ncRNA_intronic
CAediting_1066232	chr15_84627551_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1066193	chr15_84609440_+	SINE	Alu	AluJr4
CAediting_1066194	chr15_84611597_+	SINE	Alu	AluSx1
CAediting_1066195	chr15_84611601_+	SINE	Alu	AluSx1
CAediting_1066196	chr15_84618141_+	SINE	Alu	AluSx
CAediting_1066197	chr15_84618149_+	SINE	Alu	AluSx
CAediting_1066198	chr15_84618584_+	SINE	Alu	AluSx1
CAediting_1066199	chr15_84618786_+	SINE	Alu	AluSx1
CAediting_1066200	chr15_84618832_+	SINE	Alu	AluSx1
CAediting_1066201	chr15_84619283_+	SINE	Alu	AluY
CAediting_1066202	chr15_84619309_+	SINE	Alu	AluY
CAediting_1066203	chr15_84619315_+	SINE	Alu	AluY
CAediting_1066205	chr15_84623240_+	SINE	Alu	AluY
CAediting_1066206	chr15_84623243_+	SINE	Alu	AluY
CAediting_1066207	chr15_84623253_+	SINE	Alu	AluY
CAediting_1066208	chr15_84623268_+	SINE	Alu	AluY
CAediting_1066209	chr15_84623277_+	SINE	Alu	AluY
CAediting_1066210	chr15_84623291_+	SINE	Alu	AluY
CAediting_1066211	chr15_84623299_+	SINE	Alu	AluY
CAediting_1066212	chr15_84623303_+	SINE	Alu	AluY
CAediting_1066213	chr15_84623331_+	SINE	Alu	AluY
CAediting_1066214	chr15_84623353_+	SINE	Alu	AluY
CAediting_1066215	chr15_84623366_+	SINE	Alu	AluY
CAediting_1066216	chr15_84624089_+	SINE	Alu	AluSx1
CAediting_1066217	chr15_84624167_+	SINE	Alu	AluSx1
CAediting_1066218	chr15_84624172_+	SINE	Alu	AluSx1
CAediting_1066219	chr15_84624220_+	SINE	Alu	AluSx1
CAediting_1066220	chr15_84624230_+	SINE	Alu	AluSx1
CAediting_1066221	chr15_84625578_+	SINE	Alu	AluSx3
CAediting_1066222	chr15_84625586_+	SINE	Alu	AluSx3
CAediting_1066223	chr15_84626363_+	SINE	Alu	AluSq2
CAediting_1066224	chr15_84626540_+	SINE	Alu	AluSq2
CAediting_1066225	chr15_84626965_+	SINE	Alu	AluJo
CAediting_1066226	chr15_84627066_+	SINE	Alu	AluJo
CAediting_1066227	chr15_84627067_+	SINE	Alu	AluJo
CAediting_1066228	chr15_84627080_+	SINE	Alu	AluJo
CAediting_1066229	chr15_84627307_+	SINE	Alu	AluSx1
CAediting_1066230	chr15_84627321_+	SINE	Alu	AluSx1
CAediting_1066231	chr15_84627470_+	SINE	Alu	AluSx1
CAediting_1066232	chr15_84627551_+	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for ZSCAN2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_1066208	chr15_84623268_+	84623255:84623277	3SS	0+7i	TTTCTTTTTTTGTATTTTTAGTA	-4.18	TTTCTTTTTTTGTGTTTTTAGTA	-3.39
IR	CAediting_1066208	chr15_84623268_+	84623258:84623280	3SS	0+10i	CTTTTTTTGTATTTTTAGTAGAG	-14.34	CTTTTTTTGTGTTTTTAGTAGAG	-13.29
IR	CAediting_1066209	chr15_84623277_+	84623255:84623277	3SS	3+0i	TTTCTTTTTTTGTATTTTTAGTA	-4.18	TTTCTTTTTTTGTATTTTTAGTG	-4.12
IR	CAediting_1066209	chr15_84623277_+	84623258:84623280	3SS	0+1i	CTTTTTTTGTATTTTTAGTAGAG	-14.34	CTTTTTTTGTATTTTTAGTGGAG	-5.59

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000176371.12.ZSCAN2.

Correlation between RNA A-to-I editing and PSI for ENSG00000176371.12.ZSCAN2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZSCAN2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZSCAN2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZSCAN2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000448803	hsa-miR-3190-5p	84623297	84623303	7mer-m8	84623285	84623304	147.00	-19.82
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000448803	hsa-miR-548s	84623296	84623302	7mer-m8	84623284	84623303	143.00	-13.25
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000358472	hsa-miR-3190-5p	84623297	84623303	7mer-m8	84623285	84623304	147.00	-19.82
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000358472	hsa-miR-548s	84623296	84623302	7mer-m8	84623284	84623303	143.00	-13.25
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000538076	hsa-miR-3190-5p	84623297	84623303	7mer-m8	84623285	84623304	147.00	-19.82
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000538076	hsa-miR-548s	84623296	84623302	7mer-m8	84623284	84623303	143.00	-13.25
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000540894	hsa-miR-3190-5p	84623297	84623303	7mer-m8	84623285	84623304	147.00	-19.82
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000540894	hsa-miR-548s	84623296	84623302	7mer-m8	84623284	84623303	143.00	-13.25
CAediting_1066205	chr15_84623240_+	ENSG00000176371.12	ENST00000448803	hsa-miR-6786-5p	84623233	84623239	7mer-m8	84623219	84623240	147.00	-24.84
CAediting_1066205	chr15_84623240_+	ENSG00000176371.12	ENST00000358472	hsa-miR-6786-5p	84623233	84623239	7mer-m8	84623219	84623240	147.00	-24.84
CAediting_1066207	chr15_84623253_+	ENSG00000176371.12	ENST00000448803	hsa-miR-1207-3p	84623246	84623253	8mer-1a	84623236	84623253	140.00	-14.68
CAediting_1066207	chr15_84623253_+	ENSG00000176371.12	ENST00000448803	hsa-miR-34a-3p	84623249	84623255	7mer-m8	84623234	84623256	141.00	-8.12
CAediting_1066207	chr15_84623253_+	ENSG00000176371.12	ENST00000358472	hsa-miR-1207-3p	84623246	84623253	8mer-1a	84623236	84623253	140.00	-14.68
CAediting_1066207	chr15_84623253_+	ENSG00000176371.12	ENST00000358472	hsa-miR-34a-3p	84623249	84623255	7mer-m8	84623234	84623256	141.00	-8.12
CAediting_1066208	chr15_84623268_+	ENSG00000176371.12	ENST00000448803	hsa-miR-4801	84623263	84623268	6mer	84623246	84623269	151.00	-12.88
CAediting_1066208	chr15_84623268_+	ENSG00000176371.12	ENST00000358472	hsa-miR-4801	84623263	84623268	6mer	84623246	84623269	151.00	-12.88
CAediting_1066215	chr15_84623366_+	ENSG00000176371.12	ENST00000448803	hsa-miR-106a-3p	84623362	84623367	6mer	84623347	84623368	146.00	-23.59
CAediting_1066215	chr15_84623366_+	ENSG00000176371.12	ENST00000358472	hsa-miR-106a-3p	84623362	84623367	6mer	84623347	84623368	146.00	-23.59
CAediting_1066215	chr15_84623366_+	ENSG00000176371.12	ENST00000541040	hsa-miR-106a-3p	84623362	84623367	6mer	84623347	84623368	146.00	-23.59
CAediting_1066215	chr15_84623366_+	ENSG00000176371.12	ENST00000538076	hsa-miR-106a-3p	84623362	84623367	6mer	84623347	84623368	146.00	-23.59
CAediting_1066215	chr15_84623366_+	ENSG00000176371.12	ENST00000540894	hsa-miR-106a-3p	84623362	84623367	6mer	84623347	84623368	146.00	-23.59
CAediting_1066206	chr15_84623243_+	ENSG00000176371.12	ENST00000448803	hsa-miR-4466	84623240	84623246	7mer-m8	84623228	84623247	142.00	-28.95
CAediting_1066206	chr15_84623243_+	ENSG00000176371.12	ENST00000448803	hsa-miR-675-5p	84623240	84623246	7mer-m8	84623224	84623247	152.00	-25.42
CAediting_1066206	chr15_84623243_+	ENSG00000176371.12	ENST00000358472	hsa-miR-4466	84623240	84623246	7mer-m8	84623228	84623247	142.00	-28.95
CAediting_1066206	chr15_84623243_+	ENSG00000176371.12	ENST00000358472	hsa-miR-675-5p	84623240	84623246	7mer-m8	84623224	84623247	152.00	-25.42
CAediting_1066214	chr15_84623353_+	ENSG00000176371.12	ENST00000448803	hsa-miR-4497	84623347	84623353	7mer-m8	84623339	84623354	149.00	-28.47
CAediting_1066214	chr15_84623353_+	ENSG00000176371.12	ENST00000358472	hsa-miR-4497	84623347	84623353	7mer-m8	84623339	84623354	149.00	-28.47
CAediting_1066214	chr15_84623353_+	ENSG00000176371.12	ENST00000541040	hsa-miR-4497	84623347	84623353	7mer-m8	84623339	84623354	149.00	-28.47
CAediting_1066214	chr15_84623353_+	ENSG00000176371.12	ENST00000538076	hsa-miR-4497	84623347	84623353	7mer-m8	84623339	84623354	149.00	-28.47
CAediting_1066214	chr15_84623353_+	ENSG00000176371.12	ENST00000540894	hsa-miR-4497	84623347	84623353	7mer-m8	84623339	84623354	149.00	-28.47

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1066213	chr15_84623331_+	ENSG00000176371.12	ENST00000448803	hsa-miR-1288-5p	84623328	84623334	7mer-m8	84623310	84623335	151	-17.97
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000448803	hsa-miR-3064-5p	84623298	84623303	6mer	84623284	84623304	148	-27.59
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000448803	hsa-miR-3064-5p	84623298	84623303	6mer	84623284	84623304	148	-27.59
CAediting_1066206	chr15_84623243_+	ENSG00000176371.12	ENST00000448803	hsa-miR-4455	84623241	84623248	8mer-1a	84623233	84623248	148	-16.7
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000448803	hsa-miR-4793-5p	84623301	84623307	7mer-m8	84623285	84623308	146	-16.93
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000448803	hsa-miR-4794	84623297	84623303	7mer-m8	84623282	84623304	151	-18.1
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000448803	hsa-miR-4794	84623297	84623303	7mer-m8	84623282	84623304	151	-18.1
CAediting_1066208	chr15_84623268_+	ENSG00000176371.12	ENST00000448803	hsa-miR-524-5p	84623262	84623267	6mer	84623248	84623268	140	-7.27
CAediting_1066213	chr15_84623331_+	ENSG00000176371.12	ENST00000448803	hsa-miR-5694	84623328	84623333	6mer	84623313	84623334	142	-22.72
CAediting_1066209	chr15_84623277_+	ENSG00000176371.12	ENST00000448803	hsa-miR-593-3p	84623276	84623281	6mer	84623264	84623282	140	-18.96
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000448803	hsa-miR-664a-5p	84623297	84623303	7mer-m8	84623281	84623304	143	-17.14
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000448803	hsa-miR-664a-5p	84623297	84623303	7mer-m8	84623281	84623304	143	-17.14
CAediting_1066213	chr15_84623331_+	ENSG00000176371.12	ENST00000358472	hsa-miR-1288-5p	84623328	84623334	7mer-m8	84623310	84623335	151	-17.97
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000358472	hsa-miR-3064-5p	84623298	84623303	6mer	84623284	84623304	148	-27.59
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000358472	hsa-miR-3064-5p	84623298	84623303	6mer	84623284	84623304	148	-27.59
CAediting_1066206	chr15_84623243_+	ENSG00000176371.12	ENST00000358472	hsa-miR-4455	84623241	84623248	8mer-1a	84623233	84623248	148	-16.7
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000358472	hsa-miR-4793-5p	84623301	84623307	7mer-m8	84623285	84623308	146	-16.93
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000358472	hsa-miR-4794	84623297	84623303	7mer-m8	84623282	84623304	151	-18.1
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000358472	hsa-miR-4794	84623297	84623303	7mer-m8	84623282	84623304	151	-18.1
CAediting_1066208	chr15_84623268_+	ENSG00000176371.12	ENST00000358472	hsa-miR-524-5p	84623262	84623267	6mer	84623248	84623268	140	-7.27
CAediting_1066213	chr15_84623331_+	ENSG00000176371.12	ENST00000358472	hsa-miR-5694	84623328	84623333	6mer	84623313	84623334	142	-22.72
CAediting_1066209	chr15_84623277_+	ENSG00000176371.12	ENST00000358472	hsa-miR-593-3p	84623276	84623281	6mer	84623264	84623282	140	-18.96
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000358472	hsa-miR-664a-5p	84623297	84623303	7mer-m8	84623281	84623304	143	-17.14
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000358472	hsa-miR-664a-5p	84623297	84623303	7mer-m8	84623281	84623304	143	-17.14
CAediting_1066213	chr15_84623331_+	ENSG00000176371.12	ENST00000538076	hsa-miR-1288-5p	84623328	84623334	7mer-m8	84623310	84623335	151	-17.97
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000538076	hsa-miR-3064-5p	84623298	84623303	6mer	84623284	84623304	148	-27.59
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000538076	hsa-miR-3064-5p	84623298	84623303	6mer	84623284	84623304	148	-27.59
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000538076	hsa-miR-4793-5p	84623301	84623307	7mer-m8	84623285	84623308	146	-16.93
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000538076	hsa-miR-4794	84623297	84623303	7mer-m8	84623282	84623304	151	-18.1
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000538076	hsa-miR-4794	84623297	84623303	7mer-m8	84623282	84623304	151	-18.1
CAediting_1066213	chr15_84623331_+	ENSG00000176371.12	ENST00000538076	hsa-miR-5694	84623328	84623333	6mer	84623313	84623334	142	-22.72
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000538076	hsa-miR-664a-5p	84623297	84623303	7mer-m8	84623281	84623304	143	-17.14
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000538076	hsa-miR-664a-5p	84623297	84623303	7mer-m8	84623281	84623304	143	-17.14
CAediting_1066213	chr15_84623331_+	ENSG00000176371.12	ENST00000540894	hsa-miR-1288-5p	84623328	84623334	7mer-m8	84623310	84623335	151	-17.97
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000540894	hsa-miR-3064-5p	84623298	84623303	6mer	84623284	84623304	148	-27.59
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000540894	hsa-miR-3064-5p	84623298	84623303	6mer	84623284	84623304	148	-27.59
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000540894	hsa-miR-4793-5p	84623301	84623307	7mer-m8	84623285	84623308	146	-16.93
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000540894	hsa-miR-4794	84623297	84623303	7mer-m8	84623282	84623304	151	-18.1
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000540894	hsa-miR-4794	84623297	84623303	7mer-m8	84623282	84623304	151	-18.1
CAediting_1066213	chr15_84623331_+	ENSG00000176371.12	ENST00000540894	hsa-miR-5694	84623328	84623333	6mer	84623313	84623334	142	-22.72
CAediting_1066211	chr15_84623299_+	ENSG00000176371.12	ENST00000540894	hsa-miR-664a-5p	84623297	84623303	7mer-m8	84623281	84623304	143	-17.14
CAediting_1066212	chr15_84623303_+	ENSG00000176371.12	ENST00000540894	hsa-miR-664a-5p	84623297	84623303	7mer-m8	84623281	84623304	143	-17.14

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229413	chr17_67471544_+	ENSG00000176371.12	ENST00000448803	hsa-miR-548aa	84623306	84623312	7mer-m8	84623289	84623313	145	-13.18
CAediting_1229415	chr17_67471547_+	ENSG00000176371.12	ENST00000448803	hsa-miR-548aa	84622547	84622553	7mer-m8	84622530	84622554	147	-7.45
CAediting_77128	chr1_85133844_+	ENSG00000176371.12	ENST00000448803	hsa-miR-4423-3p	84623230	84623236	7mer-m8	84623217	84623237	145	-16.18
CAediting_580943	chr7_100356700_+	ENSG00000176371.12	ENST00000448803	hsa-miR-6840-3p	84623176	84623182	7mer-m8	84623162	84623183	144	-27.77
CAediting_1229414	chr17_67471546_+	ENSG00000176371.12	ENST00000334141	hsa-miR-548aa	84606847	84606853	7mer-m8	84606829	84606854	157	-14.48
CAediting_1229413	chr17_67471544_+	ENSG00000176371.12	ENST00000358472	hsa-miR-548aa	84623306	84623312	7mer-m8	84623289	84623313	145	-13.18
CAediting_1229415	chr17_67471547_+	ENSG00000176371.12	ENST00000358472	hsa-miR-548aa	84622547	84622553	7mer-m8	84622530	84622554	147	-7.45
CAediting_77128	chr1_85133844_+	ENSG00000176371.12	ENST00000358472	hsa-miR-4423-3p	84623230	84623236	7mer-m8	84623217	84623237	145	-16.18
CAediting_580943	chr7_100356700_+	ENSG00000176371.12	ENST00000358472	hsa-miR-6840-3p	84623176	84623182	7mer-m8	84623162	84623183	144	-27.77
CAediting_1229413	chr17_67471544_+	ENSG00000176371.12	ENST00000538076	hsa-miR-548aa	84623306	84623312	7mer-m8	84623289	84623313	145	-13.18
CAediting_1229415	chr17_67471547_+	ENSG00000176371.12	ENST00000540894	hsa-miR-548aa	84622547	84622553	7mer-m8	84622530	84622554	147	-7.45
CAediting_1229413	chr17_67471544_+	ENSG00000176371.12	ENST00000540894	hsa-miR-548aa	84623306	84623312	7mer-m8	84623289	84623313	145	-13.18
CAediting_468389	chr6_31355314_-	ENSG00000176371.12	ENST00000448803	hsa-miR-6891-5p	84623623	84623629	7mer-m8	84623612	84623630	145	-17.19
CAediting_468389	chr6_31355314_-	ENSG00000176371.12	ENST00000358472	hsa-miR-6891-5p	84623623	84623629	7mer-m8	84623612	84623630	145	-17.19
CAediting_468389	chr6_31355314_-	ENSG00000176371.12	ENST00000541040	hsa-miR-6891-5p	84623623	84623629	7mer-m8	84623612	84623630	145	-17.19
CAediting_468389	chr6_31355314_-	ENSG00000176371.12	ENST00000538076	hsa-miR-6891-5p	84623623	84623629	7mer-m8	84623612	84623630	145	-17.19
CAediting_468389	chr6_31355314_-	ENSG00000176371.12	ENST00000540894	hsa-miR-6891-5p	84623623	84623629	7mer-m8	84623612	84623630	145	-17.19
CAediting_468389	chr6_31355314_-	ENSG00000176371.12	ENST00000485222	hsa-miR-6891-5p	84623623	84623629	7mer-m8	84623612	84623630	145	-17.19

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_468389	chr6_31355314_-	ENSG00000176371.12	ENST00000379358	hsa-miR-6891-5p	84616360	84616366	7mer-m8	84616347	84616367	145	-20.48

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZSCAN2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ZSCAN2

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for ZSCAN2

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ZSCAN2

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ZSCAN2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ZSCAN2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene