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Editing gene: PIGX (CAeditome ID:54965)

Gene summary for PIGX

Gene summary

Gene information	Gene symbol	PIGX
	Gene ID	54965
	Gene name	phosphatidylinositol glycan anchor biosynthesis class X
	Synonyms	PIG-X
	Cytomap	3q29
	Type of gene	protein-coding
	Description	phosphatidylinositol-glycan biosynthesis class X proteinGPI-mannosyltransferase subunit
	Modification date	20210518
	UniProtAcc	Q8TBF5
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for PIGX

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000163964.12

RNA A-to-I editing events in Cancer.

CAediting_339281(196641237, +), CAediting_339282(196641347, +), CAediting_339283(196641352, +), CAediting_339284(196642949, +), CAediting_339285(196642991, +), CAediting_339286(196647582, +), CAediting_339287(196647652, +), CAediting_339288(196647660, +), CAediting_339289(196647676, +), CAediting_339290(196647688, +), CAediting_339291(196647724, +), CAediting_339292(196647964, +), CAediting_339293(196648489, +), CAediting_339294(196648490, +), CAediting_339295(196648495, +), CAediting_339296(196648503, +), CAediting_339297(196648511, +), CAediting_339298(196648512, +), CAediting_339299(196648547, +), CAediting_339300(196648552, +), CAediting_339301(196648565, +), CAediting_339302(196648566, +), CAediting_339303(196648571, +), CAediting_339304(196648581, +), CAediting_339305(196648582, +), CAediting_339306(196648583, +), CAediting_339307(196648588, +), CAediting_339308(196648590, +), CAediting_339309(196648591, +), CAediting_339310(196648596, +), CAediting_339311(196648602, +), CAediting_339312(196648605, +), CAediting_339313(196648619, +), CAediting_339314(196648623, +), CAediting_339315(196648646, +), CAediting_339316(196648708, +), CAediting_339317(196650165, +), CAediting_339318(196650171, +), CAediting_339319(196650204, +), CAediting_339320(196650206, +), CAediting_339321(196650210, +), CAediting_339322(196650227, +), CAediting_339323(196650241, +), CAediting_339324(196650261, +), CAediting_339325(196650273, +), CAediting_339326(196650283, +), CAediting_339327(196650542, +), CAediting_339328(196650543, +), CAediting_339329(196650563, +), CAediting_339330(196651446, +), CAediting_339331(196651580, +), CAediting_339332(196651605, +), CAediting_339333(196655112, +), CAediting_339334(196655956, +), CAediting_339335(196655962, +), CAediting_339336(196657084, +), CAediting_339337(196657097, +), CAediting_339338(196657543, +), CAediting_339339(196657546, +), CAediting_339340(196657547, +), CAediting_339341(196657627, +), CAediting_339342(196658711, +), CAediting_339343(196658757, +), CAediting_339344(196658890, +), CAediting_339345(196658891, +), CAediting_339346(196658915, +), CAediting_339347(196658958, +), CAediting_339348(196659408, +), CAediting_339349(196659412, +), CAediting_339350(196659425, +), CAediting_339351(196659465, +), CAediting_339352(196659473, +), CAediting_339353(196659483, +), CAediting_339354(196659498, +), CAediting_339355(196659583, +), CAediting_339356(196665011, +), CAediting_339357(196668135, +), CAediting_339358(196668691, +), CAediting_339359(196668729, +), CAediting_339360(196668759, +), CAediting_339361(196668800, +), CAediting_339362(196668807, +), CAediting_339363(196668813, +), CAediting_339364(196671011, +), CAediting_339365(196671691, +), CAediting_339366(196671703, +), CAediting_339367(196671728, +), CAediting_339368(196672952, +), CAediting_339369(196672981, +), CAediting_339370(196673035, +), CAediting_339371(196673036, +), CAediting_339372(196673114, +), CAediting_339373(196681790, +), CAediting_339374(196691040, +), CAediting_339375(196696762, +), CAediting_339376(196698046, +), CAediting_339377(196701796, +), CAediting_339378(196705978, +), CAediting_339379(196713690, +), CAediting_339380(196713716, +), CAediting_339381(196713726, +), CAediting_339382(196713743, +), CAediting_339383(196714265, +), CAediting_339384(196714555, +), CAediting_339385(196717051, +), CAediting_339386(196717052, +), CAediting_339387(196717146, +), CAediting_339388(196717180, +), CAediting_339389(196717222, +), CAediting_339390(196721806, +), CAediting_339391(196724212, +), CAediting_339392(196730512, +), CAediting_339393(196730546, +), CAediting_339394(196730547, +), CAediting_339395(196730597, +), CAediting_339396(196732009, +), CAediting_339397(196733480, +), CAediting_339398(196733485, +), CAediting_339399(196733492, +), CAediting_339400(196733569, +), CAediting_339401(196733577, +), CAediting_339402(196733648, +), CAediting_339403(196734294, +), CAediting_339404(196734308, +), CAediting_339405(196734316, +), CAediting_339406(196734317, +), CAediting_339407(196734339, +), CAediting_339408(196734352, +), CAediting_339409(196734355, +), CAediting_339410(196734357, +), CAediting_339411(196734362, +), CAediting_339412(196734363, +), CAediting_339413(196734387, +), CAediting_339414(196734401, +), CAediting_339415(196734402, +), CAediting_339416(196734403, +), CAediting_339417(196734404, +), CAediting_339418(196734405, +), CAediting_339419(196734407, +), CAediting_339420(196734410, +), CAediting_339421(196734412, +), CAediting_339422(196734416, +), CAediting_339423(196734442, +), CAediting_339424(196734453, +), CAediting_339425(196734458, +), CAediting_339426(196734459, +), CAediting_339427(196734483, +), CAediting_339428(196734484, +), CAediting_339429(196734506, +), CAediting_339430(196734512, +), CAediting_339431(196734513, +), CAediting_339432(196734515, +), CAediting_339433(196734533, +), CAediting_339434(196734548, +), CAediting_339435(196734589, +), CAediting_339436(196735008, +), CAediting_339437(196735039, +), CAediting_339438(196735040, +), CAediting_339439(196735062, +), CAediting_339440(196735064, +), CAediting_339441(196735078, +), CAediting_339442(196735083, +), CAediting_339443(196735086, +), CAediting_339444(196735109, +), CAediting_339445(196735115, +), CAediting_339446(196735116, +), CAediting_339447(196735117, +), CAediting_339448(196735128, +), CAediting_339449(196735133, +), CAediting_339450(196735137, +), CAediting_339451(196735140, +), CAediting_339452(196735156, +), CAediting_339453(196735166, +), CAediting_339454(196735174, +), CAediting_339455(196735216, +), CAediting_339456(196735223, +), CAediting_339457(196735227, +), CAediting_339458(196735245, +), CAediting_339459(196735250, +),

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RNA editing positional annotations for PIGX using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_339281	chr3_196641237_+	ncRNA_intronic
CAediting_339282	chr3_196641347_+	ncRNA_intronic
CAediting_339283	chr3_196641352_+	ncRNA_intronic
CAediting_339284	chr3_196642949_+	ncRNA_intronic
CAediting_339285	chr3_196642991_+	ncRNA_intronic
CAediting_339286	chr3_196647582_+	ncRNA_intronic
CAediting_339287	chr3_196647652_+	ncRNA_intronic
CAediting_339288	chr3_196647660_+	ncRNA_intronic
CAediting_339289	chr3_196647676_+	ncRNA_intronic
CAediting_339290	chr3_196647688_+	ncRNA_intronic
CAediting_339291	chr3_196647724_+	ncRNA_intronic
CAediting_339292	chr3_196647964_+	ncRNA_intronic
CAediting_339293	chr3_196648489_+	ncRNA_intronic
CAediting_339294	chr3_196648490_+	ncRNA_intronic
CAediting_339295	chr3_196648495_+	ncRNA_intronic
CAediting_339296	chr3_196648503_+	ncRNA_intronic
CAediting_339297	chr3_196648511_+	ncRNA_intronic
CAediting_339298	chr3_196648512_+	ncRNA_intronic
CAediting_339299	chr3_196648547_+	ncRNA_intronic
CAediting_339300	chr3_196648552_+	ncRNA_intronic
CAediting_339301	chr3_196648565_+	ncRNA_intronic
CAediting_339302	chr3_196648566_+	ncRNA_intronic
CAediting_339303	chr3_196648571_+	ncRNA_intronic
CAediting_339304	chr3_196648581_+	ncRNA_intronic
CAediting_339305	chr3_196648582_+	ncRNA_intronic
CAediting_339306	chr3_196648583_+	ncRNA_intronic
CAediting_339307	chr3_196648588_+	ncRNA_intronic
CAediting_339308	chr3_196648590_+	ncRNA_intronic
CAediting_339309	chr3_196648591_+	ncRNA_intronic
CAediting_339310	chr3_196648596_+	ncRNA_intronic
CAediting_339311	chr3_196648602_+	ncRNA_intronic
CAediting_339312	chr3_196648605_+	ncRNA_intronic
CAediting_339313	chr3_196648619_+	ncRNA_intronic
CAediting_339314	chr3_196648623_+	ncRNA_intronic
CAediting_339315	chr3_196648646_+	ncRNA_intronic
CAediting_339316	chr3_196648708_+	ncRNA_intronic
CAediting_339317	chr3_196650165_+	ncRNA_intronic
CAediting_339318	chr3_196650171_+	ncRNA_intronic
CAediting_339319	chr3_196650204_+	ncRNA_intronic
CAediting_339320	chr3_196650206_+	ncRNA_intronic
CAediting_339321	chr3_196650210_+	ncRNA_intronic
CAediting_339322	chr3_196650227_+	ncRNA_intronic
CAediting_339323	chr3_196650241_+	ncRNA_intronic
CAediting_339324	chr3_196650261_+	ncRNA_intronic
CAediting_339325	chr3_196650273_+	ncRNA_intronic
CAediting_339326	chr3_196650283_+	ncRNA_intronic
CAediting_339327	chr3_196650542_+	ncRNA_intronic
CAediting_339328	chr3_196650543_+	ncRNA_intronic
CAediting_339329	chr3_196650563_+	ncRNA_intronic
CAediting_339330	chr3_196651446_+	ncRNA_intronic
CAediting_339331	chr3_196651580_+	ncRNA_intronic
CAediting_339332	chr3_196651605_+	ncRNA_intronic
CAediting_339333	chr3_196655112_+	intronic
CAediting_339334	chr3_196655956_+	intronic
CAediting_339335	chr3_196655962_+	intronic
CAediting_339336	chr3_196657084_+	intronic
CAediting_339337	chr3_196657097_+	intronic
CAediting_339338	chr3_196657543_+	intronic
CAediting_339339	chr3_196657546_+	intronic
CAediting_339340	chr3_196657547_+	intronic
CAediting_339341	chr3_196657627_+	intronic
CAediting_339342	chr3_196658711_+	intronic
CAediting_339343	chr3_196658757_+	intronic
CAediting_339344	chr3_196658890_+	intronic
CAediting_339345	chr3_196658891_+	intronic
CAediting_339346	chr3_196658915_+	intronic
CAediting_339347	chr3_196658958_+	intronic
CAediting_339348	chr3_196659408_+	intronic
CAediting_339349	chr3_196659412_+	intronic
CAediting_339350	chr3_196659425_+	intronic
CAediting_339351	chr3_196659465_+	intronic
CAediting_339352	chr3_196659473_+	intronic
CAediting_339353	chr3_196659483_+	intronic
CAediting_339354	chr3_196659498_+	intronic
CAediting_339355	chr3_196659583_+	intronic
CAediting_339356	chr3_196665011_+	intronic
CAediting_339357	chr3_196668135_+	intronic
CAediting_339358	chr3_196668691_+	intronic
CAediting_339359	chr3_196668729_+	intronic
CAediting_339360	chr3_196668759_+	intronic
CAediting_339361	chr3_196668800_+	intronic
CAediting_339362	chr3_196668807_+	intronic
CAediting_339363	chr3_196668813_+	intronic
CAediting_339364	chr3_196671011_+	intronic
CAediting_339365	chr3_196671691_+	intronic
CAediting_339366	chr3_196671703_+	intronic
CAediting_339367	chr3_196671728_+	intronic
CAediting_339368	chr3_196672952_+	intronic
CAediting_339369	chr3_196672981_+	intronic
CAediting_339370	chr3_196673035_+	intronic
CAediting_339371	chr3_196673036_+	intronic
CAediting_339372	chr3_196673114_+	intronic
CAediting_339373	chr3_196681790_+	intronic
CAediting_339374	chr3_196691040_+	intronic
CAediting_339375	chr3_196696762_+	intronic
CAediting_339376	chr3_196698046_+	intronic
CAediting_339377	chr3_196701796_+	intronic
CAediting_339378	chr3_196705978_+	intronic
CAediting_339379	chr3_196713690_+	ncRNA_intronic
CAediting_339380	chr3_196713716_+	ncRNA_intronic
CAediting_339381	chr3_196713726_+	ncRNA_intronic
CAediting_339382	chr3_196713743_+	ncRNA_intronic
CAediting_339383	chr3_196714265_+	ncRNA_intronic
CAediting_339384	chr3_196714555_+	ncRNA_intronic
CAediting_339385	chr3_196717051_+	ncRNA_intronic
CAediting_339386	chr3_196717052_+	ncRNA_intronic
CAediting_339387	chr3_196717146_+	ncRNA_intronic
CAediting_339388	chr3_196717180_+	ncRNA_intronic
CAediting_339389	chr3_196717222_+	ncRNA_intronic
CAediting_339390	chr3_196721806_+	ncRNA_intronic
CAediting_339391	chr3_196724212_+	intronic
CAediting_339392	chr3_196730512_+	intronic
CAediting_339393	chr3_196730546_+	intronic
CAediting_339394	chr3_196730547_+	intronic
CAediting_339395	chr3_196730597_+	intronic
CAediting_339396	chr3_196732009_+	intronic
CAediting_339397	chr3_196733480_+	intronic
CAediting_339398	chr3_196733485_+	intronic
CAediting_339399	chr3_196733492_+	intronic
CAediting_339400	chr3_196733569_+	intronic
CAediting_339401	chr3_196733577_+	intronic
CAediting_339402	chr3_196733648_+	intronic
CAediting_339403	chr3_196734294_+	UTR3
CAediting_339404	chr3_196734308_+	UTR3
CAediting_339405	chr3_196734316_+	UTR3
CAediting_339406	chr3_196734317_+	UTR3
CAediting_339407	chr3_196734339_+	UTR3
CAediting_339408	chr3_196734352_+	UTR3
CAediting_339409	chr3_196734355_+	UTR3
CAediting_339410	chr3_196734357_+	UTR3
CAediting_339411	chr3_196734362_+	UTR3
CAediting_339412	chr3_196734363_+	UTR3
CAediting_339413	chr3_196734387_+	UTR3
CAediting_339414	chr3_196734401_+	UTR3
CAediting_339415	chr3_196734402_+	UTR3
CAediting_339416	chr3_196734403_+	UTR3
CAediting_339417	chr3_196734404_+	UTR3
CAediting_339418	chr3_196734405_+	UTR3
CAediting_339419	chr3_196734407_+	UTR3
CAediting_339420	chr3_196734410_+	UTR3
CAediting_339421	chr3_196734412_+	UTR3
CAediting_339422	chr3_196734416_+	UTR3
CAediting_339423	chr3_196734442_+	UTR3
CAediting_339424	chr3_196734453_+	UTR3
CAediting_339425	chr3_196734458_+	UTR3
CAediting_339426	chr3_196734459_+	UTR3
CAediting_339427	chr3_196734483_+	UTR3
CAediting_339428	chr3_196734484_+	UTR3
CAediting_339429	chr3_196734506_+	UTR3
CAediting_339430	chr3_196734512_+	UTR3
CAediting_339431	chr3_196734513_+	UTR3
CAediting_339432	chr3_196734515_+	UTR3
CAediting_339433	chr3_196734533_+	UTR3
CAediting_339434	chr3_196734548_+	UTR3
CAediting_339435	chr3_196734589_+	UTR3
CAediting_339436	chr3_196735008_+	UTR3
CAediting_339437	chr3_196735039_+	UTR3
CAediting_339438	chr3_196735040_+	UTR3
CAediting_339439	chr3_196735062_+	UTR3
CAediting_339440	chr3_196735064_+	UTR3
CAediting_339441	chr3_196735078_+	UTR3
CAediting_339442	chr3_196735083_+	UTR3
CAediting_339443	chr3_196735086_+	UTR3
CAediting_339444	chr3_196735109_+	UTR3
CAediting_339445	chr3_196735115_+	UTR3
CAediting_339446	chr3_196735116_+	UTR3
CAediting_339447	chr3_196735117_+	UTR3
CAediting_339448	chr3_196735128_+	UTR3
CAediting_339449	chr3_196735133_+	UTR3
CAediting_339450	chr3_196735137_+	UTR3
CAediting_339451	chr3_196735140_+	UTR3
CAediting_339452	chr3_196735156_+	UTR3
CAediting_339453	chr3_196735166_+	UTR3
CAediting_339454	chr3_196735174_+	UTR3
CAediting_339455	chr3_196735216_+	UTR3
CAediting_339456	chr3_196735223_+	UTR3
CAediting_339457	chr3_196735227_+	UTR3
CAediting_339458	chr3_196735245_+	UTR3
CAediting_339459	chr3_196735250_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_339281	chr3_196641237_+	SINE	Alu	AluJo
CAediting_339282	chr3_196641347_+	SINE	Alu	AluJo
CAediting_339283	chr3_196641352_+	SINE	Alu	AluJo
CAediting_339284	chr3_196642949_+	SINE	Alu	AluSq2
CAediting_339285	chr3_196642991_+	SINE	Alu	AluSq2
CAediting_339286	chr3_196647582_+	SINE	Alu	AluSx1
CAediting_339287	chr3_196647652_+	SINE	Alu	AluSx1
CAediting_339288	chr3_196647660_+	SINE	Alu	AluSx1
CAediting_339289	chr3_196647676_+	SINE	Alu	AluSx1
CAediting_339290	chr3_196647688_+	SINE	Alu	AluSx1
CAediting_339291	chr3_196647724_+	SINE	Alu	AluSx1
CAediting_339292	chr3_196647964_+	SINE	Alu	AluSx
CAediting_339293	chr3_196648489_+	SINE	Alu	AluSp
CAediting_339294	chr3_196648490_+	SINE	Alu	AluSp
CAediting_339295	chr3_196648495_+	SINE	Alu	AluSp
CAediting_339296	chr3_196648503_+	SINE	Alu	AluSp
CAediting_339297	chr3_196648511_+	SINE	Alu	AluSp
CAediting_339298	chr3_196648512_+	SINE	Alu	AluSp
CAediting_339299	chr3_196648547_+	SINE	Alu	AluSp
CAediting_339300	chr3_196648552_+	SINE	Alu	AluSp
CAediting_339301	chr3_196648565_+	SINE	Alu	AluSp
CAediting_339302	chr3_196648566_+	SINE	Alu	AluSp
CAediting_339303	chr3_196648571_+	SINE	Alu	AluSp
CAediting_339304	chr3_196648581_+	SINE	Alu	AluSp
CAediting_339305	chr3_196648582_+	SINE	Alu	AluSp
CAediting_339306	chr3_196648583_+	SINE	Alu	AluSp
CAediting_339307	chr3_196648588_+	SINE	Alu	AluSp
CAediting_339308	chr3_196648590_+	SINE	Alu	AluSp
CAediting_339309	chr3_196648591_+	SINE	Alu	AluSp
CAediting_339310	chr3_196648596_+	SINE	Alu	AluSp
CAediting_339311	chr3_196648602_+	SINE	Alu	AluSp
CAediting_339312	chr3_196648605_+	SINE	Alu	AluSp
CAediting_339313	chr3_196648619_+	SINE	Alu	AluSp
CAediting_339314	chr3_196648623_+	SINE	Alu	AluSp
CAediting_339315	chr3_196648646_+	SINE	Alu	AluSp
CAediting_339316	chr3_196648708_+	SINE	Alu	AluSp
CAediting_339317	chr3_196650165_+	SINE	Alu	AluSx1
CAediting_339318	chr3_196650171_+	SINE	Alu	AluSx1
CAediting_339319	chr3_196650204_+	SINE	Alu	AluSx1
CAediting_339320	chr3_196650206_+	SINE	Alu	AluSx1
CAediting_339321	chr3_196650210_+	SINE	Alu	AluSx1
CAediting_339322	chr3_196650227_+	SINE	Alu	AluSx1
CAediting_339323	chr3_196650241_+	SINE	Alu	AluSx1
CAediting_339324	chr3_196650261_+	SINE	Alu	AluSx1
CAediting_339325	chr3_196650273_+	SINE	Alu	AluSx1
CAediting_339326	chr3_196650283_+	SINE	Alu	AluSx1
CAediting_339327	chr3_196650542_+	SINE	Alu	AluJb
CAediting_339328	chr3_196650543_+	SINE	Alu	AluJb
CAediting_339329	chr3_196650563_+	SINE	Alu	AluJb
CAediting_339330	chr3_196651446_+	LTR	ERVL	LTR33A_
CAediting_339331	chr3_196651580_+	SINE	Alu	AluSq2
CAediting_339332	chr3_196651605_+	SINE	Alu	AluSq2
CAediting_339333	chr3_196655112_+	SINE	Alu	AluJb
CAediting_339334	chr3_196655956_+	SINE	Alu	AluSg
CAediting_339335	chr3_196655962_+	SINE	Alu	AluSg
CAediting_339336	chr3_196657084_+	SINE	Alu	AluSx1
CAediting_339337	chr3_196657097_+	SINE	Alu	AluSx1
CAediting_339338	chr3_196657543_+	SINE	Alu	AluSq2
CAediting_339339	chr3_196657546_+	SINE	Alu	AluSq2
CAediting_339340	chr3_196657547_+	SINE	Alu	AluSq2
CAediting_339341	chr3_196657627_+	SINE	Alu	AluSq2
CAediting_339342	chr3_196658711_+	SINE	Alu	AluSx
CAediting_339343	chr3_196658757_+	SINE	Alu	AluSx
CAediting_339344	chr3_196658890_+	SINE	Alu	AluSx
CAediting_339345	chr3_196658891_+	SINE	Alu	AluSx
CAediting_339346	chr3_196658915_+	SINE	Alu	AluSx
CAediting_339347	chr3_196658958_+	SINE	Alu	AluSx
CAediting_339348	chr3_196659408_+	SINE	Alu	AluSx1
CAediting_339349	chr3_196659412_+	SINE	Alu	AluSx1
CAediting_339350	chr3_196659425_+	SINE	Alu	AluSx1
CAediting_339351	chr3_196659465_+	SINE	Alu	AluSx1
CAediting_339352	chr3_196659473_+	SINE	Alu	AluSx1
CAediting_339353	chr3_196659483_+	SINE	Alu	AluSx1
CAediting_339354	chr3_196659498_+	SINE	Alu	AluSx1
CAediting_339355	chr3_196659583_+	SINE	Alu	AluSx1
CAediting_339356	chr3_196665011_+	SINE	Alu	AluSx
CAediting_339357	chr3_196668135_+	SINE	Alu	AluSx
CAediting_339358	chr3_196668691_+	SINE	Alu	AluSx1
CAediting_339359	chr3_196668729_+	SINE	Alu	AluSx1
CAediting_339360	chr3_196668759_+	SINE	Alu	AluSx1
CAediting_339361	chr3_196668800_+	SINE	Alu	AluSx1
CAediting_339362	chr3_196668807_+	SINE	Alu	AluSx1
CAediting_339363	chr3_196668813_+	SINE	Alu	AluSx1
CAediting_339364	chr3_196671011_+	SINE	Alu	AluSx
CAediting_339368	chr3_196672952_+	SINE	Alu	AluSx1
CAediting_339369	chr3_196672981_+	SINE	Alu	AluSx1
CAediting_339370	chr3_196673035_+	SINE	Alu	AluSx1
CAediting_339371	chr3_196673036_+	SINE	Alu	AluSx1
CAediting_339372	chr3_196673114_+	SINE	Alu	AluSx1
CAediting_339373	chr3_196681790_+	SINE	Alu	AluSp
CAediting_339374	chr3_196691040_+	SINE	Alu	AluSx
CAediting_339375	chr3_196696762_+	SINE	Alu	AluJb
CAediting_339376	chr3_196698046_+	SINE	Alu	AluSc
CAediting_339377	chr3_196701796_+	SINE	Alu	AluJr
CAediting_339378	chr3_196705978_+	SINE	Alu	AluJb
CAediting_339379	chr3_196713690_+	SINE	Alu	AluSx3
CAediting_339380	chr3_196713716_+	SINE	Alu	AluSx3
CAediting_339381	chr3_196713726_+	SINE	Alu	AluSx3
CAediting_339382	chr3_196713743_+	SINE	Alu	AluSx3
CAediting_339383	chr3_196714265_+	SINE	Alu	AluJr
CAediting_339384	chr3_196714555_+	SINE	Alu	AluSx3
CAediting_339385	chr3_196717051_+	SINE	Alu	AluSg
CAediting_339386	chr3_196717052_+	SINE	Alu	AluSg
CAediting_339387	chr3_196717146_+	SINE	Alu	AluSg
CAediting_339388	chr3_196717180_+	SINE	Alu	AluSg
CAediting_339389	chr3_196717222_+	SINE	Alu	AluSg
CAediting_339390	chr3_196721806_+	SINE	Alu	AluSx
CAediting_339391	chr3_196724212_+	SINE	Alu	AluSx
CAediting_339392	chr3_196730512_+	SINE	Alu	AluSg4
CAediting_339393	chr3_196730546_+	SINE	Alu	AluSg4
CAediting_339394	chr3_196730547_+	SINE	Alu	AluSg4
CAediting_339395	chr3_196730597_+	SINE	Alu	AluSg4
CAediting_339396	chr3_196732009_+	SINE	Alu	AluSx1
CAediting_339397	chr3_196733480_+	SINE	Alu	AluSx1
CAediting_339398	chr3_196733485_+	SINE	Alu	AluSx1
CAediting_339399	chr3_196733492_+	SINE	Alu	AluSx1
CAediting_339400	chr3_196733569_+	SINE	Alu	AluSx1
CAediting_339401	chr3_196733577_+	SINE	Alu	AluSx1
CAediting_339402	chr3_196733648_+	SINE	Alu	AluSx1
CAediting_339403	chr3_196734294_+	SINE	Alu	AluSx1
CAediting_339404	chr3_196734308_+	SINE	Alu	AluSx1
CAediting_339405	chr3_196734316_+	SINE	Alu	AluSx1
CAediting_339406	chr3_196734317_+	SINE	Alu	AluSx1
CAediting_339407	chr3_196734339_+	SINE	Alu	AluSx1
CAediting_339408	chr3_196734352_+	SINE	Alu	AluSx1
CAediting_339409	chr3_196734355_+	SINE	Alu	AluSx1
CAediting_339410	chr3_196734357_+	SINE	Alu	AluSx1
CAediting_339411	chr3_196734362_+	SINE	Alu	AluSx1
CAediting_339412	chr3_196734363_+	SINE	Alu	AluSx1
CAediting_339413	chr3_196734387_+	SINE	Alu	AluSx1
CAediting_339414	chr3_196734401_+	SINE	Alu	AluSx1
CAediting_339415	chr3_196734402_+	SINE	Alu	AluSx1
CAediting_339416	chr3_196734403_+	SINE	Alu	AluSx1
CAediting_339417	chr3_196734404_+	SINE	Alu	AluSx1
CAediting_339418	chr3_196734405_+	SINE	Alu	AluSx1
CAediting_339419	chr3_196734407_+	SINE	Alu	AluSx1
CAediting_339420	chr3_196734410_+	SINE	Alu	AluSx1
CAediting_339421	chr3_196734412_+	SINE	Alu	AluSx1
CAediting_339422	chr3_196734416_+	SINE	Alu	AluSx1
CAediting_339423	chr3_196734442_+	SINE	Alu	AluSx1
CAediting_339424	chr3_196734453_+	SINE	Alu	AluSx1
CAediting_339425	chr3_196734458_+	SINE	Alu	AluSx1
CAediting_339426	chr3_196734459_+	SINE	Alu	AluSx1
CAediting_339427	chr3_196734483_+	SINE	Alu	AluSx1
CAediting_339428	chr3_196734484_+	SINE	Alu	AluSx1
CAediting_339429	chr3_196734506_+	SINE	Alu	AluSx1
CAediting_339430	chr3_196734512_+	SINE	Alu	AluSx1
CAediting_339431	chr3_196734513_+	SINE	Alu	AluSx1
CAediting_339432	chr3_196734515_+	SINE	Alu	AluSx1
CAediting_339433	chr3_196734533_+	SINE	Alu	AluSx1
CAediting_339434	chr3_196734548_+	SINE	Alu	AluSx1
CAediting_339435	chr3_196734589_+	SINE	Alu	AluSx1
CAediting_339437	chr3_196735039_+	SINE	Alu	AluY
CAediting_339438	chr3_196735040_+	SINE	Alu	AluY
CAediting_339439	chr3_196735062_+	SINE	Alu	AluY
CAediting_339440	chr3_196735064_+	SINE	Alu	AluY
CAediting_339441	chr3_196735078_+	SINE	Alu	AluY
CAediting_339442	chr3_196735083_+	SINE	Alu	AluY
CAediting_339443	chr3_196735086_+	SINE	Alu	AluY
CAediting_339444	chr3_196735109_+	SINE	Alu	AluY
CAediting_339445	chr3_196735115_+	SINE	Alu	AluY
CAediting_339446	chr3_196735116_+	SINE	Alu	AluY
CAediting_339447	chr3_196735117_+	SINE	Alu	AluY
CAediting_339448	chr3_196735128_+	SINE	Alu	AluY
CAediting_339449	chr3_196735133_+	SINE	Alu	AluY
CAediting_339450	chr3_196735137_+	SINE	Alu	AluY
CAediting_339451	chr3_196735140_+	SINE	Alu	AluY
CAediting_339452	chr3_196735156_+	SINE	Alu	AluY
CAediting_339453	chr3_196735166_+	SINE	Alu	AluY
CAediting_339454	chr3_196735174_+	SINE	Alu	AluY
CAediting_339455	chr3_196735216_+	SINE	Alu	AluY
CAediting_339456	chr3_196735223_+	SINE	Alu	AluY
CAediting_339457	chr3_196735227_+	SINE	Alu	AluY
CAediting_339458	chr3_196735245_+	SINE	Alu	AluY
CAediting_339459	chr3_196735250_+	SINE	Alu	AluY

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RNA A-to-I editing events in the alternative splicing sites for PIGX

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_339427	chr3_196734483_+	196734472:196734494	3SS	0+9i	AGGATCGCTTGAACCTGGGAGGC	-28.66	AGGATCGCTTGGACCTGGGAGGC	-29.81
IR	CAediting_339428	chr3_196734484_+	196734472:196734494	3SS	0+8i	AGGATCGCTTGAACCTGGGAGGC	-28.66	AGGATCGCTTGAGCCTGGGAGGC	-34.92

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000163964.12.PIGX.

Correlation between RNA A-to-I editing and PSI for ENSG00000163964.12.PIGX.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PIGX

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PIGX

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PIGX

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_339409	chr3_196734355_+	ENSG00000163964.12	ENST00000392391	hsa-miR-598-5p	196734348	196734354	7mer-m8	196734333	196734355	150.00	-22.94
CAediting_339412	chr3_196734363_+	ENSG00000163964.12	ENST00000392391	hsa-miR-378a-5p	196734358	196734364	7mer-m8	196734344	196734365	155.00	-23.86
CAediting_339416	chr3_196734403_+	ENSG00000163964.12	ENST00000392391	hsa-miR-630	196734401	196734408	8mer-1a	196734387	196734408	157.00	-16.15
CAediting_339421	chr3_196734412_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6782-3p	196734407	196734413	7mer-m8	196734392	196734414	151.00	-12.23
CAediting_339423	chr3_196734442_+	ENSG00000163964.12	ENST00000392391	hsa-miR-140-3p	196734437	196734443	7mer-m8	196734424	196734444	151.00	-22.67
CAediting_339454	chr3_196735174_+	ENSG00000163964.12	ENST00000392391	hsa-miR-140-3p	196735169	196735175	7mer-m8	196735156	196735176	164.00	-24.57
CAediting_339405	chr3_196734316_+	ENSG00000163964.12	ENST00000392391	hsa-miR-513a-5p	196734310	196734316	7mer-m8	196734300	196734317	144.00	-17.77
CAediting_339405	chr3_196734316_+	ENSG00000163964.12	ENST00000392391	hsa-miR-513a-5p	196734310	196734316	7mer-m8	196734300	196734317	144.00	-17.77
CAediting_339405	chr3_196734316_+	ENSG00000163964.12	ENST00000392391	hsa-miR-638	196734315	196734321	7mer-1a	196734297	196734321	149.00	-29.88
CAediting_339407	chr3_196734339_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4707-5p	196734334	196734340	7mer-m8	196734319	196734341	142.00	-26.95
CAediting_339411	chr3_196734362_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3615	196734360	196734365	6mer	196734346	196734366	142.00	-21.23
CAediting_339413	chr3_196734387_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3158-3p	196734384	196734390	7mer-m8	196734371	196734391	150.00	-20.99
CAediting_339413	chr3_196734387_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3158-3p	196734384	196734390	7mer-m8	196734371	196734391	150.00	-20.99
CAediting_339413	chr3_196734387_+	ENSG00000163964.12	ENST00000392391	hsa-miR-412-3p	196734380	196734386	7mer-m8	196734362	196734387	145.00	-19.00
CAediting_339413	chr3_196734387_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6754-3p	196734380	196734386	7mer-m8	196734366	196734387	145.00	-13.59
CAediting_339414	chr3_196734401_+	ENSG00000163964.12	ENST00000392391	hsa-miR-222-5p	196734395	196734402	8mer-1a	196734379	196734402	146.00	-14.38
CAediting_339414	chr3_196734401_+	ENSG00000163964.12	ENST00000392391	hsa-miR-30a-3p	196734397	196734404	8mer-1a	196734380	196734404	150.00	-10.49
CAediting_339414	chr3_196734401_+	ENSG00000163964.12	ENST00000392391	hsa-miR-30d-3p	196734397	196734404	8mer-1a	196734379	196734404	147.00	-10.55
CAediting_339414	chr3_196734401_+	ENSG00000163964.12	ENST00000392391	hsa-miR-30e-3p	196734397	196734404	8mer-1a	196734380	196734404	150.00	-11.75
CAediting_339414	chr3_196734401_+	ENSG00000163964.12	ENST00000392391	hsa-miR-936	196734394	196734401	8mer-1a	196734379	196734401	159.00	-26.12
CAediting_339415	chr3_196734402_+	ENSG00000163964.12	ENST00000392391	hsa-miR-325	196734395	196734402	8mer-1a	196734380	196734402	141.00	-12.77
CAediting_339419	chr3_196734407_+	ENSG00000163964.12	ENST00000392391	hsa-miR-153-5p	196734400	196734406	7mer-m8	196734387	196734407	146.00	-9.95
CAediting_339419	chr3_196734407_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3680-3p	196734404	196734411	8mer-1a	196734389	196734411	140.00	-13.99
CAediting_339419	chr3_196734407_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3680-3p	196734404	196734411	8mer-1a	196734389	196734411	140.00	-13.99
CAediting_339420	chr3_196734410_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3182	196734406	196734412	7mer-m8	196734396	196734413	150.00	-15.42
CAediting_339420	chr3_196734410_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4742-3p	196734403	196734410	8mer-1a	196734388	196734410	142.00	-10.99
CAediting_339424	chr3_196734453_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4661-5p	196734447	196734453	7mer-m8	196734429	196734454	150.00	-20.06
CAediting_339425	chr3_196734458_+	ENSG00000163964.12	ENST00000392391	hsa-miR-150-5p	196734453	196734459	7mer-m8	196734437	196734460	142.00	-14.51
CAediting_339426	chr3_196734459_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6887-3p	196734455	196734461	7mer-m8	196734442	196734462	156.00	-18.37
CAediting_339428	chr3_196734484_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3155a	196734481	196734487	7mer-m8	196734467	196734488	141.00	-24.95
CAediting_339428	chr3_196734484_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3155b	196734481	196734487	7mer-m8	196734470	196734488	141.00	-22.98
CAediting_339428	chr3_196734484_+	ENSG00000163964.12	ENST00000392391	hsa-miR-484	196734481	196734487	7mer-m8	196734465	196734488	167.00	-34.70
CAediting_339429	chr3_196734506_+	ENSG00000163964.12	ENST00000392391	hsa-miR-10398-5p	196734504	196734511	8mer-1a	196734489	196734511	158.00	-35.49
CAediting_339429	chr3_196734506_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4254	196734500	196734505	6mer	196734486	196734506	146.00	-28.32
CAediting_339429	chr3_196734506_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4308	196734500	196734507	8mer-1a	196734490	196734507	156.00	-25.48
CAediting_339429	chr3_196734506_+	ENSG00000163964.12	ENST00000392391	hsa-miR-7106-3p	196734503	196734509	7mer-m8	196734487	196734510	168.00	-31.17
CAediting_339429	chr3_196734506_+	ENSG00000163964.12	ENST00000392391	hsa-miR-7113-3p	196734502	196734508	7mer-m8	196734482	196734509	158.00	-31.95
CAediting_339430	chr3_196734512_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4638-5p	196734507	196734514	8mer-1a	196734495	196734514	150.00	-20.22
CAediting_339430	chr3_196734512_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6741-3p	196734505	196734512	8mer-1a	196734488	196734512	159.00	-30.78
CAediting_339431	chr3_196734513_+	ENSG00000163964.12	ENST00000392391	hsa-miR-149-5p	196734506	196734512	7mer-m8	196734488	196734513	147.00	-27.13
CAediting_339432	chr3_196734515_+	ENSG00000163964.12	ENST00000392391	hsa-miR-212-5p	196734508	196734514	7mer-m8	196734493	196734515	155.00	-23.72
CAediting_339432	chr3_196734515_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6813-3p	196734509	196734515	7mer-m8	196734497	196734516	153.00	-19.17
CAediting_339435	chr3_196734589_+	ENSG00000163964.12	ENST00000392391	hsa-miR-26a-1-3p	196734582	196734589	8mer-1a	196734569	196734589	152.00	-9.68
CAediting_339435	chr3_196734589_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4482-3p	196734584	196734590	7mer-m8	196734570	196734591	148.00	-7.68
CAediting_339437	chr3_196735039_+	ENSG00000163964.12	ENST00000392391	hsa-miR-638	196735038	196735044	7mer-1a	196735020	196735044	147.00	-31.30
CAediting_339438	chr3_196735040_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3199	196735038	196735044	7mer-1a	196735025	196735044	141.00	-18.75
CAediting_339438	chr3_196735040_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3199	196735038	196735044	7mer-1a	196735025	196735044	141.00	-18.75
CAediting_339438	chr3_196735040_+	ENSG00000163964.12	ENST00000392391	hsa-miR-625-3p	196735034	196735040	7mer-m8	196735020	196735041	140.00	-14.38
CAediting_339438	chr3_196735040_+	ENSG00000163964.12	ENST00000392391	hsa-miR-8052	196735038	196735044	7mer-1a	196735024	196735044	141.00	-23.40
CAediting_339439	chr3_196735062_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4449	196735058	196735064	7mer-m8	196735046	196735065	149.00	-28.81
CAediting_339440	chr3_196735064_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4707-3p	196735062	196735069	8mer-1a	196735048	196735069	154.00	-23.67
CAediting_339443	chr3_196735086_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4732-3p	196735079	196735085	7mer-m8	196735063	196735086	157.00	-27.53
CAediting_339445	chr3_196735115_+	ENSG00000163964.12	ENST00000392391	hsa-miR-23a-5p	196735113	196735119	7mer-m8	196735098	196735120	144.00	-20.42
CAediting_339445	chr3_196735115_+	ENSG00000163964.12	ENST00000392391	hsa-miR-23b-5p	196735113	196735119	7mer-m8	196735100	196735120	144.00	-14.59
CAediting_339446	chr3_196735116_+	ENSG00000163964.12	ENST00000392391	hsa-miR-1229-3p	196735110	196735116	7mer-m8	196735095	196735117	140.00	-13.50
CAediting_339447	chr3_196735117_+	ENSG00000163964.12	ENST00000392391	hsa-miR-412-3p	196735110	196735116	7mer-m8	196735095	196735117	151.00	-19.78
CAediting_339447	chr3_196735117_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6754-3p	196735110	196735116	7mer-m8	196735097	196735117	146.00	-16.46
CAediting_339448	chr3_196735128_+	ENSG00000163964.12	ENST00000392391	hsa-miR-374b-3p	196735125	196735132	8mer-1a	196735110	196735132	151.00	-12.20
CAediting_339448	chr3_196735128_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4756-3p	196735121	196735127	7mer-m8	196735109	196735128	151.00	-16.61
CAediting_339452	chr3_196735156_+	ENSG00000163964.12	ENST00000392391	hsa-miR-1228-3p	196735152	196735157	6mer	196735139	196735158	142.00	-22.13
CAediting_339455	chr3_196735216_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4437	196735212	196735218	7mer-m8	196735199	196735219	145.00	-16.63
CAediting_339455	chr3_196735216_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6847-3p	196735210	196735216	7mer-m8	196735196	196735217	154.00	-22.53
CAediting_339456	chr3_196735223_+	ENSG00000163964.12	ENST00000392391	hsa-miR-1470	196735218	196735224	7mer-m8	196735203	196735225	142.00	-25.51
CAediting_339456	chr3_196735223_+	ENSG00000163964.12	ENST00000392391	hsa-miR-18a-3p	196735221	196735228	8mer-1a	196735206	196735228	153.00	-16.86
CAediting_339456	chr3_196735223_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4290	196735219	196735226	8mer-1a	196735206	196735226	148.00	-18.94
CAediting_339459	chr3_196735250_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4634	196735247	196735254	8mer-1a	196735234	196735254	150.00	-24.65
CAediting_339404	chr3_196734308_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4466	196734306	196734311	6mer	196734295	196734312	140.00	-24.71
CAediting_339410	chr3_196734357_+	ENSG00000163964.12	ENST00000392391	hsa-miR-331-3p	196734352	196734358	7mer-m8	196734338	196734359	141.00	-25.18
CAediting_339410	chr3_196734357_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6846-3p	196734354	196734361	8mer-1a	196734340	196734361	154.00	-24.55
CAediting_339427	chr3_196734483_+	ENSG00000163964.12	ENST00000392391	hsa-miR-9900	196734481	196734487	7mer-m8	196734469	196734488	153.00	-18.84
CAediting_339449	chr3_196735133_+	ENSG00000163964.12	ENST00000392391	hsa-miR-630	196735131	196735138	8mer-1a	196735118	196735138	158.00	-15.14
CAediting_339450	chr3_196735137_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3680-3p	196735134	196735141	8mer-1a	196735119	196735141	140.00	-14.24
CAediting_339450	chr3_196735137_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3680-3p	196735134	196735141	8mer-1a	196735119	196735141	140.00	-14.24
CAediting_339451	chr3_196735140_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4742-3p	196735133	196735140	8mer-1a	196735118	196735140	142.00	-9.18
CAediting_339457	chr3_196735227_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6880-3p	196735220	196735226	7mer-m8	196735207	196735227	141.00	-19.46

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_339405	chr3_196734316_+	ENSG00000163964.12	ENST00000392391	hsa-miR-10399-5p	196734311	196734317	7mer-m8	196734297	196734318	148	-10
CAediting_339406	chr3_196734317_+	ENSG00000163964.12	ENST00000392391	hsa-miR-10399-5p	196734311	196734317	7mer-m8	196734297	196734318	148	-10
CAediting_339455	chr3_196735216_+	ENSG00000163964.12	ENST00000392391	hsa-miR-1206	196735210	196735216	7mer-m8	196735197	196735217	145	-11.84
CAediting_339403	chr3_196734294_+	ENSG00000163964.12	ENST00000392391	hsa-miR-1271-3p	196734292	196734299	8mer-1a	196734276	196734299	149	-15.48
CAediting_339429	chr3_196734506_+	ENSG00000163964.12	ENST00000392391	hsa-miR-1299	196734499	196734505	7mer-m8	196734484	196734506	151	-21.09
CAediting_339446	chr3_196735116_+	ENSG00000163964.12	ENST00000392391	hsa-miR-193b-5p	196735114	196735121	8mer-1a	196735100	196735121	142	-13.12
CAediting_339447	chr3_196735117_+	ENSG00000163964.12	ENST00000392391	hsa-miR-193b-5p	196735114	196735121	8mer-1a	196735100	196735121	142	-13.12
CAediting_339433	chr3_196734533_+	ENSG00000163964.12	ENST00000392391	hsa-miR-20b-3p	196734527	196734533	7mer-m8	196734513	196734534	144	-13.86
CAediting_339444	chr3_196735109_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3152-3p	196735103	196735109	7mer-m8	196735090	196735110	145	-18.08
CAediting_339447	chr3_196735117_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3170	196735115	196735121	7mer-m8	196735098	196735122	147	-17.08
CAediting_339403	chr3_196734294_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3176	196734288	196734294	7mer-m8	196734277	196734295	141	-14.89
CAediting_339457	chr3_196735227_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3194-3p	196735224	196735230	7mer-m8	196735212	196735231	143	-20.13
CAediting_339429	chr3_196734506_+	ENSG00000163964.12	ENST00000392391	hsa-miR-326	196734501	196734507	7mer-1a	196734486	196734507	149	-26.98
CAediting_339436	chr3_196735008_+	ENSG00000163964.12	ENST00000392391	hsa-miR-329-5p	196735004	196735010	7mer-m8	196734991	196735011	146	-6.97
CAediting_339436	chr3_196735008_+	ENSG00000163964.12	ENST00000392391	hsa-miR-329-5p	196735004	196735010	7mer-m8	196734991	196735011	146	-6.97
CAediting_339429	chr3_196734506_+	ENSG00000163964.12	ENST00000392391	hsa-miR-330-5p	196734501	196734507	7mer-1a	196734485	196734507	145	-27.99
CAediting_339439	chr3_196735062_+	ENSG00000163964.12	ENST00000392391	hsa-miR-340-3p	196735060	196735066	7mer-m8	196735046	196735067	150	-19.96
CAediting_339440	chr3_196735064_+	ENSG00000163964.12	ENST00000392391	hsa-miR-340-3p	196735060	196735066	7mer-m8	196735046	196735067	150	-19.96
CAediting_339442	chr3_196735083_+	ENSG00000163964.12	ENST00000392391	hsa-miR-378a-5p	196735079	196735085	7mer-m8	196735065	196735086	153	-23.97
CAediting_339443	chr3_196735086_+	ENSG00000163964.12	ENST00000392391	hsa-miR-378a-5p	196735079	196735085	7mer-m8	196735065	196735086	153	-23.97
CAediting_339403	chr3_196734294_+	ENSG00000163964.12	ENST00000392391	hsa-miR-3922-3p	196734288	196734294	7mer-m8	196734276	196734295	153	-16.78
CAediting_339456	chr3_196735223_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4297	196735219	196735226	8mer-1a	196735211	196735226	142	-14.25
CAediting_339408	chr3_196734352_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4299	196734349	196734356	8mer-1a	196734339	196734356	140	-15.11
CAediting_339409	chr3_196734355_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4299	196734349	196734356	8mer-1a	196734339	196734356	140	-15.11
CAediting_339458	chr3_196735245_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4638-5p	196735239	196735246	8mer-1a	196735227	196735246	146	-21.99
CAediting_339434	chr3_196734548_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4743-3p	196734541	196734547	7mer-m8	196734529	196734548	143	-15.5
CAediting_339427	chr3_196734483_+	ENSG00000163964.12	ENST00000392391	hsa-miR-498-5p	196734477	196734483	7mer-m8	196734462	196734484	142	-12.22
CAediting_339428	chr3_196734484_+	ENSG00000163964.12	ENST00000392391	hsa-miR-498-5p	196734477	196734483	7mer-m8	196734462	196734484	142	-12.22
CAediting_339457	chr3_196735227_+	ENSG00000163964.12	ENST00000392391	hsa-miR-5001-3p	196735222	196735228	7mer-m8	196735211	196735229	152	-19.79
CAediting_339453	chr3_196735166_+	ENSG00000163964.12	ENST00000392391	hsa-miR-501-3p	196735160	196735167	8mer-1a	196735144	196735167	143	-16.63
CAediting_339453	chr3_196735166_+	ENSG00000163964.12	ENST00000392391	hsa-miR-502-3p	196735160	196735167	8mer-1a	196735146	196735167	140	-16.13
CAediting_339438	chr3_196735040_+	ENSG00000163964.12	ENST00000392391	hsa-miR-5089-5p	196735038	196735044	7mer-m8	196735024	196735045	148	-14.07
CAediting_339406	chr3_196734317_+	ENSG00000163964.12	ENST00000392391	hsa-miR-5089-5p	196734315	196734321	7mer-m8	196734300	196734322	148	-13.62
CAediting_339429	chr3_196734506_+	ENSG00000163964.12	ENST00000392391	hsa-miR-518c-5p	196734500	196734507	8mer-1a	196734485	196734507	141	-22.13
CAediting_339403	chr3_196734294_+	ENSG00000163964.12	ENST00000392391	hsa-miR-550a-3-5p	196734292	196734299	8mer-1a	196734280	196734299	140	-12.5
CAediting_339403	chr3_196734294_+	ENSG00000163964.12	ENST00000392391	hsa-miR-550a-5p	196734292	196734299	8mer-1a	196734277	196734299	140	-16.78
CAediting_339403	chr3_196734294_+	ENSG00000163964.12	ENST00000392391	hsa-miR-550a-5p	196734292	196734299	8mer-1a	196734277	196734299	140	-16.78
CAediting_339456	chr3_196735223_+	ENSG00000163964.12	ENST00000392391	hsa-miR-5581-5p	196735219	196735226	8mer-1a	196735205	196735226	147	-18.13
CAediting_339405	chr3_196734316_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6504-3p	196734311	196734317	7mer-m8	196734297	196734318	149	-15.11
CAediting_339406	chr3_196734317_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6504-3p	196734311	196734317	7mer-m8	196734297	196734318	149	-15.11
CAediting_339409	chr3_196734355_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6764-3p	196734351	196734357	7mer-m8	196734338	196734358	151	-19.1
CAediting_339410	chr3_196734357_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6764-3p	196734351	196734357	7mer-m8	196734338	196734358	151	-19.1
CAediting_339441	chr3_196735078_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6790-3p	196735075	196735082	8mer-1a	196735059	196735082	144	-21.06
CAediting_339404	chr3_196734308_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6807-5p	196734301	196734307	7mer-m8	196734286	196734308	152	-24.83
CAediting_339429	chr3_196734506_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6817-3p	196734502	196734508	7mer-m8	196734488	196734509	143	-18.15
CAediting_339410	chr3_196734357_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6821-3p	196734354	196734361	8mer-1a	196734340	196734361	154	-26.15
CAediting_339413	chr3_196734387_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6823-5p	196734385	196734391	7mer-m8	196734372	196734392	143	-17.84
CAediting_339409	chr3_196734355_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6824-3p	196734351	196734357	7mer-m8	196734339	196734358	152	-23.51
CAediting_339410	chr3_196734357_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6824-3p	196734351	196734357	7mer-m8	196734339	196734358	152	-23.51
CAediting_339439	chr3_196735062_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6827-3p	196735060	196735066	7mer-m8	196735048	196735067	147	-20.95
CAediting_339440	chr3_196735064_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6827-3p	196735060	196735066	7mer-m8	196735048	196735067	147	-20.95
CAediting_339448	chr3_196735128_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6832-5p	196735122	196735128	7mer-m8	196735107	196735129	142	-15.43
CAediting_339447	chr3_196735117_+	ENSG00000163964.12	ENST00000392391	hsa-miR-6855-5p	196735115	196735121	7mer-m8	196735096	196735122	151	-16.71
CAediting_339433	chr3_196734533_+	ENSG00000163964.12	ENST00000392391	hsa-miR-7974	196734530	196734535	6mer	196734513	196734536	141	-17.85
CAediting_339423	chr3_196734442_+	ENSG00000163964.12	ENST00000392391	hsa-miR-8052	196734441	196734447	7mer-1a	196734426	196734447	144	-20.86
CAediting_339430	chr3_196734512_+	ENSG00000163964.12	ENST00000392391	hsa-miR-8057	196734505	196734512	8mer-1a	196734492	196734512	146	-13.69

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000163964.12	ENST00000392391	hsa-miR-624-3p	196734386	196734392	7mer-m8	196734373	196734393	147	-13.11
CAediting_980496	chr14_31014685_-	ENSG00000163964.12	ENST00000392391	hsa-miR-624-3p	196734552	196734558	7mer-m8	196734539	196734559	152	-14.28
CAediting_688080	chr9_63819626_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4477b	196734095	196734101	7mer-m8	196734080	196734102	146	-11.7
CAediting_688080	chr9_63819626_+	ENSG00000163964.12	ENST00000415832	hsa-miR-4477b	196734095	196734101	7mer-m8	196734080	196734102	146	-11.7
CAediting_396018	chr5_1062918_-	ENSG00000163964.12	ENST00000392391	hsa-miR-4635	196734096	196734102	7mer-m8	196734085	196734103	141	-13.51
CAediting_1054808	chr15_66496985_-	ENSG00000163964.12	ENST00000457284	hsa-miR-4512	196727953	196727959	7mer-m8	196727941	196727960	159	-23.34
CAediting_1229414	chr17_67471546_+	ENSG00000163964.12	ENST00000453218	hsa-miR-548aa	196721249	196721255	7mer-m8	196721232	196721256	140	-10.94
CAediting_1229415	chr17_67471547_+	ENSG00000163964.12	ENST00000453218	hsa-miR-548aa	196721336	196721342	7mer-m8	196721321	196721343	141	-10.31
CAediting_1351755	chr19_40282625_-	ENSG00000163964.12	ENST00000453218	hsa-miR-641	196721297	196721302	6mer	196721278	196721303	156	-26.18
CAediting_442554	chr5_154685830_+	ENSG00000163964.12	ENST00000453218	hsa-miR-1303	196721299	196721305	7mer-m8	196721285	196721306	150	-19.31
CAediting_1054808	chr15_66496985_-	ENSG00000163964.12	ENST00000453218	hsa-miR-4512	196727953	196727959	7mer-m8	196727941	196727960	159	-23.34
CAediting_1054808	chr15_66496985_-	ENSG00000163964.12	ENST00000415832	hsa-miR-4512	196727953	196727959	7mer-m8	196727941	196727960	159	-23.34
CAediting_396018	chr5_1062918_-	ENSG00000163964.12	ENST00000415832	hsa-miR-4635	196734096	196734102	7mer-m8	196734085	196734103	141	-13.51

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000163964.12	ENST00000392391	hsa-miR-4477b	196734740	196734746	7mer-m8	196734724	196734747	154	-8.87
CAediting_1351755	chr19_40282625_-	ENSG00000163964.12	ENST00000392391	hsa-miR-641	196733995	196734000	6mer	196733977	196734001	143	-15.24

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for PIGX

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000392391.6	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_339403	ENST00000392391.6	chr3_196734294_+	-906.60	-907.30	-964.00
CAediting_339404	ENST00000392391.6	chr3_196734308_+	-907.10	-907.30	-964.00
CAediting_339405	ENST00000392391.6	chr3_196734316_+	-908.80	-907.30	-964.00
CAediting_339406	ENST00000392391.6	chr3_196734317_+	-907.30	-907.30	-964.00
CAediting_339407	ENST00000392391.6	chr3_196734339_+	-908.80	-907.30	-964.00
CAediting_339408	ENST00000392391.6	chr3_196734352_+	-906.90	-907.30	-964.00
CAediting_339409	ENST00000392391.6	chr3_196734355_+	-906.50	-907.30	-964.00
CAediting_339410	ENST00000392391.6	chr3_196734357_+	-909.60	-907.30	-964.00
CAediting_339411	ENST00000392391.6	chr3_196734362_+	-908.10	-907.30	-964.00
CAediting_339412	ENST00000392391.6	chr3_196734363_+	-907.30	-907.30	-964.00
CAediting_339413	ENST00000392391.6	chr3_196734387_+	-908.40	-907.30	-964.00
CAediting_339414	ENST00000392391.6	chr3_196734401_+	-907.00	-907.30	-964.00
CAediting_339415	ENST00000392391.6	chr3_196734402_+	-908.00	-907.30	-964.00
CAediting_339416	ENST00000392391.6	chr3_196734403_+	-907.40	-907.30	-964.00
CAediting_339417	ENST00000392391.6	chr3_196734404_+	-907.30	-907.30	-964.00
CAediting_339418	ENST00000392391.6	chr3_196734405_+	-907.30	-907.30	-964.00
CAediting_339419	ENST00000392391.6	chr3_196734407_+	-907.30	-907.30	-964.00
CAediting_339420	ENST00000392391.6	chr3_196734410_+	-908.80	-907.30	-964.00
CAediting_339421	ENST00000392391.6	chr3_196734412_+	-906.60	-907.30	-964.00
CAediting_339422	ENST00000392391.6	chr3_196734416_+	-909.00	-907.30	-964.00
CAediting_339423	ENST00000392391.6	chr3_196734442_+	-907.50	-907.30	-964.00
CAediting_339424	ENST00000392391.6	chr3_196734453_+	-906.60	-907.30	-964.00
CAediting_339425	ENST00000392391.6	chr3_196734458_+	-909.90	-907.30	-964.00
CAediting_339426	ENST00000392391.6	chr3_196734459_+	-911.80	-907.30	-964.00
CAediting_339427	ENST00000392391.6	chr3_196734483_+	-911.50	-907.30	-964.00
CAediting_339428	ENST00000392391.6	chr3_196734484_+	-909.60	-907.30	-964.00
CAediting_339429	ENST00000392391.6	chr3_196734506_+	-907.80	-907.30	-964.00
CAediting_339430	ENST00000392391.6	chr3_196734512_+	-907.20	-907.30	-964.00
CAediting_339431	ENST00000392391.6	chr3_196734513_+	-907.50	-907.30	-964.00
CAediting_339432	ENST00000392391.6	chr3_196734515_+	-910.80	-907.30	-964.00
CAediting_339433	ENST00000392391.6	chr3_196734533_+	-908.00	-907.30	-964.00
CAediting_339434	ENST00000392391.6	chr3_196734548_+	-908.20	-907.30	-964.00
CAediting_339435	ENST00000392391.6	chr3_196734589_+	-907.30	-907.30	-964.00
CAediting_339436	ENST00000392391.6	chr3_196735008_+	-910.90	-907.30	-964.00
CAediting_339437	ENST00000392391.6	chr3_196735039_+	-907.30	-907.30	-964.00
CAediting_339438	ENST00000392391.6	chr3_196735040_+	-907.30	-907.30	-964.00
CAediting_339439	ENST00000392391.6	chr3_196735062_+	-908.70	-907.30	-964.00
CAediting_339440	ENST00000392391.6	chr3_196735064_+	-908.70	-907.30	-964.00
CAediting_339441	ENST00000392391.6	chr3_196735078_+	-911.60	-907.30	-964.00
CAediting_339442	ENST00000392391.6	chr3_196735083_+	-906.60	-907.30	-964.00
CAediting_339443	ENST00000392391.6	chr3_196735086_+	-907.50	-907.30	-964.00
CAediting_339444	ENST00000392391.6	chr3_196735109_+	-908.40	-907.30	-964.00
CAediting_339445	ENST00000392391.6	chr3_196735115_+	-909.90	-907.30	-964.00
CAediting_339446	ENST00000392391.6	chr3_196735116_+	-908.60	-907.30	-964.00
CAediting_339447	ENST00000392391.6	chr3_196735117_+	-909.30	-907.30	-964.00
CAediting_339448	ENST00000392391.6	chr3_196735128_+	-910.50	-907.30	-964.00
CAediting_339449	ENST00000392391.6	chr3_196735133_+	-908.50	-907.30	-964.00
CAediting_339450	ENST00000392391.6	chr3_196735137_+	-907.30	-907.30	-964.00
CAediting_339451	ENST00000392391.6	chr3_196735140_+	-907.60	-907.30	-964.00
CAediting_339452	ENST00000392391.6	chr3_196735156_+	-911.60	-907.30	-964.00
CAediting_339453	ENST00000392391.6	chr3_196735166_+	-908.90	-907.30	-964.00
CAediting_339454	ENST00000392391.6	chr3_196735174_+	-909.50	-907.30	-964.00
CAediting_339455	ENST00000392391.6	chr3_196735216_+	-909.90	-907.30	-964.00
CAediting_339456	ENST00000392391.6	chr3_196735223_+	-908.30	-907.30	-964.00
CAediting_339457	ENST00000392391.6	chr3_196735227_+	-911.00	-907.30	-964.00
CAediting_339458	ENST00000392391.6	chr3_196735245_+	-914.20	-907.30	-964.00
CAediting_339459	ENST00000392391.6	chr3_196735250_+	-909.90	-907.30	-964.00

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Relation with ADAR for PIGX

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for PIGX

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for PIGX

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_339412	chr3_196734363_+	0.00222655807090844	0.0209463	1.53965e+23

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RelatedDrugs for PIGX

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PIGX

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene