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Editing gene: TRNAU1AP (CAeditome ID:54952)

Gene summary for TRNAU1AP

Gene summary

Gene information	Gene symbol	TRNAU1AP
	Gene ID	54952
	Gene name	tRNA selenocysteine 1 associated protein 1
	Synonyms	PRO1902\|SECP43\|TRSPAP1
	Cytomap	1p35.3
	Type of gene	protein-coding
	Description	tRNA selenocysteine 1-associated protein 1tRNA selenocysteine associated protein (SECP43)tRNA selenocysteine-associated protein 1
	Modification date	20210518
	UniProtAcc	Q9NX07
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for TRNAU1AP

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000180098.8

RNA A-to-I editing events in Cancer.

CAediting_34151(28554697, +), CAediting_34152(28554705, +), CAediting_34153(28554723, +), CAediting_34154(28554729, +), CAediting_34155(28555577, +), CAediting_34156(28562680, +), CAediting_34157(28563428, +), CAediting_34158(28563613, +), CAediting_34159(28563616, +), CAediting_34160(28563741, +), CAediting_34161(28565252, +), CAediting_34162(28565419, +), CAediting_34163(28565467, +), CAediting_34164(28565634, +), CAediting_34165(28565639, +), CAediting_34166(28565707, +), CAediting_34167(28565742, +), CAediting_34168(28565744, +), CAediting_34169(28566168, +), CAediting_34170(28566194, +), CAediting_34171(28566223, +), CAediting_34172(28566264, +), CAediting_34173(28566265, +), CAediting_34174(28566386, +), CAediting_34175(28566389, +), CAediting_34176(28566391, +), CAediting_34177(28566498, +), CAediting_34178(28566667, +), CAediting_34179(28566742, +), CAediting_34180(28567902, +), CAediting_34181(28567987, +), CAediting_34182(28568013, +), CAediting_34183(28568017, +), CAediting_34184(28568021, +), CAediting_34185(28568043, +), CAediting_34186(28568152, +), CAediting_34187(28568310, +), CAediting_34188(28568393, +), CAediting_34189(28568405, +), CAediting_34190(28568509, +), CAediting_34191(28568510, +), CAediting_34192(28568513, +), CAediting_34193(28568557, +), CAediting_34194(28568863, +), CAediting_34195(28569298, +), CAediting_34196(28569537, +), CAediting_34197(28569548, +), CAediting_34198(28569890, +), CAediting_34199(28569946, +), CAediting_34200(28570015, +), CAediting_34201(28570047, +), CAediting_34202(28570209, +), CAediting_34203(28570309, +), CAediting_34204(28570311, +), CAediting_34205(28570312, +), CAediting_34206(28570316, +), CAediting_34207(28570341, +), CAediting_34208(28570377, +), CAediting_34209(28570491, +), CAediting_34210(28570510, +), CAediting_34211(28571015, +), CAediting_34212(28571040, +), CAediting_34213(28571620, +), CAediting_34214(28572224, +), CAediting_34215(28572250, +), CAediting_34216(28572263, +), CAediting_34217(28572293, +), CAediting_34218(28572294, +), CAediting_34219(28572298, +), CAediting_34220(28572323, +), CAediting_34221(28572333, +), CAediting_34222(28572343, +), CAediting_34223(28572376, +), CAediting_34224(28572379, +), CAediting_34225(28572385, +), CAediting_34226(28572476, +), CAediting_34227(28572680, +), CAediting_34228(28572771, +), CAediting_34229(28572814, +), CAediting_34230(28572820, +), CAediting_34231(28572824, +), CAediting_34232(28572831, +), CAediting_34233(28572841, +), CAediting_34234(28572844, +), CAediting_34235(28572847, +), CAediting_34236(28572855, +), CAediting_34237(28572856, +), CAediting_34238(28572863, +), CAediting_34239(28572880, +), CAediting_34240(28572885, +), CAediting_34241(28572892, +), CAediting_34242(28572917, +), CAediting_34243(28572936, +), CAediting_34244(28572952, +), CAediting_34245(28573054, +), CAediting_34246(28573086, +), CAediting_34247(28573098, +), CAediting_34248(28573208, +), CAediting_34249(28573214, +), CAediting_34250(28573217, +), CAediting_34251(28573385, +), CAediting_34252(28573407, +), CAediting_34253(28573477, +), CAediting_34254(28573478, +), CAediting_34255(28573481, +), CAediting_34256(28573484, +), CAediting_34257(28573535, +), CAediting_34258(28573572, +), CAediting_34259(28573577, +), CAediting_34260(28573611, +), CAediting_34261(28573613, +), CAediting_34262(28573618, +), CAediting_34263(28573626, +), CAediting_34264(28573650, +), CAediting_34265(28573666, +), CAediting_34266(28573708, +), CAediting_34267(28573718, +), CAediting_34268(28573817, +), CAediting_34269(28573840, +), CAediting_34270(28573858, +), CAediting_34271(28573886, +), CAediting_34272(28573887, +), CAediting_34273(28573890, +), CAediting_34274(28573956, +), CAediting_34275(28573980, +), CAediting_34276(28574001, +), CAediting_34277(28574034, +), CAediting_34278(28574048, +), CAediting_34279(28574157, +), CAediting_34280(28574181, +), CAediting_34281(28574205, +), CAediting_34282(28574217, +), CAediting_34283(28574229, +), CAediting_34284(28574271, +), CAediting_34285(28574277, +), CAediting_34286(28574285, +), CAediting_34287(28574297, +), CAediting_34288(28574322, +), CAediting_34289(28574323, +), CAediting_34290(28574326, +), CAediting_34291(28574340, +), CAediting_34292(28574349, +), CAediting_34293(28574350, +), CAediting_34294(28574447, +), CAediting_34295(28574448, +), CAediting_34296(28574473, +), CAediting_34297(28574488, +), CAediting_34298(28574492, +), CAediting_34299(28574527, +), CAediting_34300(28574541, +), CAediting_34301(28574577, +), CAediting_34302(28574589, +), CAediting_34303(28574593, +), CAediting_34304(28574601, +), CAediting_34305(28574604, +), CAediting_34306(28574613, +), CAediting_34307(28574643, +), CAediting_34308(28574665, +), CAediting_34309(28574666, +), CAediting_34310(28574678, +), CAediting_34311(28574684, +), CAediting_34312(28575195, +), CAediting_34313(28575198, +), CAediting_34314(28575216, +), CAediting_34315(28575235, +), CAediting_34316(28575248, +), CAediting_34317(28575254, +), CAediting_34318(28575255, +), CAediting_34319(28575284, +), CAediting_34320(28575294, +), CAediting_34321(28575339, +), CAediting_34322(28575355, +), CAediting_34323(28575580, +), CAediting_34324(28575941, +), CAediting_34325(28575978, +), CAediting_34326(28575990, +), CAediting_34327(28576002, +), CAediting_34328(28576058, +), CAediting_34329(28576061, +), CAediting_34330(28576070, +), CAediting_34331(28576121, +), CAediting_34332(28576185, +), CAediting_34333(28576247, +), CAediting_34334(28576253, +), CAediting_34335(28576254, +), CAediting_34336(28576419, +), CAediting_34337(28576485, +), CAediting_34338(28576578, +), CAediting_34339(28576600, +), CAediting_34340(28576700, +), CAediting_34341(28576717, +), CAediting_34342(28576745, +), CAediting_34343(28576873, +), CAediting_34344(28576945, +), CAediting_34345(28576946, +), CAediting_34346(28576954, +), CAediting_34347(28576967, +), CAediting_34348(28576968, +), CAediting_34349(28576975, +), CAediting_34350(28576981, +), CAediting_34351(28576986, +), CAediting_34352(28576987, +), CAediting_34353(28576991, +), CAediting_34354(28576992, +), CAediting_34355(28576999, +), CAediting_34356(28577018, +), CAediting_34357(28577031, +), CAediting_34358(28577046, +), CAediting_34359(28577048, +), CAediting_34360(28577050, +), CAediting_34361(28577053, +), CAediting_34362(28577054, +),

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RNA editing positional annotations for TRNAU1AP using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_34151	chr1_28554697_+	ncRNA_intronic
CAediting_34152	chr1_28554705_+	ncRNA_intronic
CAediting_34153	chr1_28554723_+	ncRNA_intronic
CAediting_34154	chr1_28554729_+	ncRNA_intronic
CAediting_34155	chr1_28555577_+	ncRNA_intronic
CAediting_34156	chr1_28562680_+	ncRNA_intronic
CAediting_34157	chr1_28563428_+	ncRNA_intronic
CAediting_34158	chr1_28563613_+	ncRNA_intronic
CAediting_34159	chr1_28563616_+	ncRNA_intronic
CAediting_34160	chr1_28563741_+	ncRNA_intronic
CAediting_34161	chr1_28565252_+	ncRNA_exonic
CAediting_34162	chr1_28565419_+	ncRNA_exonic
CAediting_34163	chr1_28565467_+	ncRNA_exonic
CAediting_34164	chr1_28565634_+	ncRNA_exonic
CAediting_34165	chr1_28565639_+	ncRNA_exonic
CAediting_34166	chr1_28565707_+	ncRNA_exonic
CAediting_34167	chr1_28565742_+	ncRNA_exonic
CAediting_34168	chr1_28565744_+	ncRNA_exonic
CAediting_34169	chr1_28566168_+	ncRNA_intronic
CAediting_34170	chr1_28566194_+	ncRNA_intronic
CAediting_34171	chr1_28566223_+	ncRNA_intronic
CAediting_34172	chr1_28566264_+	ncRNA_intronic
CAediting_34173	chr1_28566265_+	ncRNA_intronic
CAediting_34174	chr1_28566386_+	ncRNA_intronic
CAediting_34175	chr1_28566389_+	ncRNA_intronic
CAediting_34176	chr1_28566391_+	ncRNA_intronic
CAediting_34177	chr1_28566498_+	ncRNA_intronic
CAediting_34178	chr1_28566667_+	ncRNA_intronic
CAediting_34179	chr1_28566742_+	ncRNA_intronic
CAediting_34180	chr1_28567902_+	ncRNA_intronic
CAediting_34181	chr1_28567987_+	ncRNA_intronic
CAediting_34182	chr1_28568013_+	ncRNA_intronic
CAediting_34183	chr1_28568017_+	ncRNA_intronic
CAediting_34184	chr1_28568021_+	ncRNA_intronic
CAediting_34185	chr1_28568043_+	ncRNA_intronic
CAediting_34186	chr1_28568152_+	ncRNA_intronic
CAediting_34187	chr1_28568310_+	ncRNA_intronic
CAediting_34188	chr1_28568393_+	ncRNA_intronic
CAediting_34189	chr1_28568405_+	ncRNA_intronic
CAediting_34190	chr1_28568509_+	ncRNA_intronic
CAediting_34191	chr1_28568510_+	ncRNA_intronic
CAediting_34192	chr1_28568513_+	ncRNA_intronic
CAediting_34193	chr1_28568557_+	ncRNA_intronic
CAediting_34194	chr1_28568863_+	ncRNA_intronic
CAediting_34195	chr1_28569298_+	ncRNA_intronic
CAediting_34196	chr1_28569537_+	ncRNA_intronic
CAediting_34197	chr1_28569548_+	ncRNA_intronic
CAediting_34198	chr1_28569890_+	ncRNA_intronic
CAediting_34199	chr1_28569946_+	ncRNA_intronic
CAediting_34200	chr1_28570015_+	ncRNA_intronic
CAediting_34201	chr1_28570047_+	ncRNA_intronic
CAediting_34202	chr1_28570209_+	ncRNA_intronic
CAediting_34203	chr1_28570309_+	ncRNA_intronic
CAediting_34204	chr1_28570311_+	ncRNA_intronic
CAediting_34205	chr1_28570312_+	ncRNA_intronic
CAediting_34206	chr1_28570316_+	ncRNA_intronic
CAediting_34207	chr1_28570341_+	ncRNA_intronic
CAediting_34208	chr1_28570377_+	ncRNA_intronic
CAediting_34209	chr1_28570491_+	ncRNA_intronic
CAediting_34210	chr1_28570510_+	ncRNA_intronic
CAediting_34211	chr1_28571015_+	ncRNA_intronic
CAediting_34212	chr1_28571040_+	ncRNA_intronic
CAediting_34213	chr1_28571620_+	ncRNA_intronic
CAediting_34214	chr1_28572224_+	ncRNA_intronic
CAediting_34215	chr1_28572250_+	ncRNA_intronic
CAediting_34216	chr1_28572263_+	ncRNA_intronic
CAediting_34217	chr1_28572293_+	ncRNA_intronic
CAediting_34218	chr1_28572294_+	ncRNA_intronic
CAediting_34219	chr1_28572298_+	ncRNA_intronic
CAediting_34220	chr1_28572323_+	ncRNA_intronic
CAediting_34221	chr1_28572333_+	ncRNA_intronic
CAediting_34222	chr1_28572343_+	ncRNA_intronic
CAediting_34223	chr1_28572376_+	ncRNA_intronic
CAediting_34224	chr1_28572379_+	ncRNA_intronic
CAediting_34225	chr1_28572385_+	ncRNA_intronic
CAediting_34226	chr1_28572476_+	ncRNA_intronic
CAediting_34227	chr1_28572680_+	ncRNA_intronic
CAediting_34228	chr1_28572771_+	ncRNA_intronic
CAediting_34229	chr1_28572814_+	ncRNA_intronic
CAediting_34230	chr1_28572820_+	ncRNA_intronic
CAediting_34231	chr1_28572824_+	ncRNA_intronic
CAediting_34232	chr1_28572831_+	ncRNA_intronic
CAediting_34233	chr1_28572841_+	ncRNA_intronic
CAediting_34234	chr1_28572844_+	ncRNA_intronic
CAediting_34235	chr1_28572847_+	ncRNA_intronic
CAediting_34236	chr1_28572855_+	ncRNA_intronic
CAediting_34237	chr1_28572856_+	ncRNA_intronic
CAediting_34238	chr1_28572863_+	ncRNA_intronic
CAediting_34239	chr1_28572880_+	ncRNA_intronic
CAediting_34240	chr1_28572885_+	ncRNA_intronic
CAediting_34241	chr1_28572892_+	ncRNA_intronic
CAediting_34242	chr1_28572917_+	ncRNA_intronic
CAediting_34243	chr1_28572936_+	ncRNA_intronic
CAediting_34244	chr1_28572952_+	ncRNA_intronic
CAediting_34245	chr1_28573054_+	ncRNA_intronic
CAediting_34246	chr1_28573086_+	ncRNA_intronic
CAediting_34247	chr1_28573098_+	ncRNA_intronic
CAediting_34248	chr1_28573208_+	ncRNA_intronic
CAediting_34249	chr1_28573214_+	ncRNA_intronic
CAediting_34250	chr1_28573217_+	ncRNA_intronic
CAediting_34251	chr1_28573385_+	ncRNA_intronic
CAediting_34252	chr1_28573407_+	ncRNA_intronic
CAediting_34253	chr1_28573477_+	ncRNA_intronic
CAediting_34254	chr1_28573478_+	ncRNA_intronic
CAediting_34255	chr1_28573481_+	ncRNA_intronic
CAediting_34256	chr1_28573484_+	ncRNA_intronic
CAediting_34257	chr1_28573535_+	ncRNA_intronic
CAediting_34258	chr1_28573572_+	ncRNA_intronic
CAediting_34259	chr1_28573577_+	ncRNA_intronic
CAediting_34260	chr1_28573611_+	ncRNA_intronic
CAediting_34261	chr1_28573613_+	ncRNA_intronic
CAediting_34262	chr1_28573618_+	ncRNA_intronic
CAediting_34263	chr1_28573626_+	ncRNA_intronic
CAediting_34264	chr1_28573650_+	ncRNA_intronic
CAediting_34265	chr1_28573666_+	ncRNA_intronic
CAediting_34266	chr1_28573708_+	ncRNA_intronic
CAediting_34267	chr1_28573718_+	ncRNA_intronic
CAediting_34268	chr1_28573817_+	ncRNA_intronic
CAediting_34269	chr1_28573840_+	ncRNA_intronic
CAediting_34270	chr1_28573858_+	ncRNA_intronic
CAediting_34271	chr1_28573886_+	ncRNA_intronic
CAediting_34272	chr1_28573887_+	ncRNA_intronic
CAediting_34273	chr1_28573890_+	ncRNA_intronic
CAediting_34274	chr1_28573956_+	ncRNA_intronic
CAediting_34275	chr1_28573980_+	ncRNA_intronic
CAediting_34276	chr1_28574001_+	ncRNA_intronic
CAediting_34277	chr1_28574034_+	ncRNA_intronic
CAediting_34278	chr1_28574048_+	ncRNA_intronic
CAediting_34279	chr1_28574157_+	ncRNA_intronic
CAediting_34280	chr1_28574181_+	ncRNA_intronic
CAediting_34281	chr1_28574205_+	ncRNA_intronic
CAediting_34282	chr1_28574217_+	ncRNA_intronic
CAediting_34283	chr1_28574229_+	ncRNA_intronic
CAediting_34284	chr1_28574271_+	ncRNA_intronic
CAediting_34285	chr1_28574277_+	ncRNA_intronic
CAediting_34286	chr1_28574285_+	ncRNA_intronic
CAediting_34287	chr1_28574297_+	ncRNA_intronic
CAediting_34288	chr1_28574322_+	ncRNA_intronic
CAediting_34289	chr1_28574323_+	ncRNA_intronic
CAediting_34290	chr1_28574326_+	ncRNA_intronic
CAediting_34291	chr1_28574340_+	ncRNA_intronic
CAediting_34292	chr1_28574349_+	ncRNA_intronic
CAediting_34293	chr1_28574350_+	ncRNA_intronic
CAediting_34294	chr1_28574447_+	ncRNA_intronic
CAediting_34295	chr1_28574448_+	ncRNA_intronic
CAediting_34296	chr1_28574473_+	ncRNA_intronic
CAediting_34297	chr1_28574488_+	ncRNA_intronic
CAediting_34298	chr1_28574492_+	ncRNA_intronic
CAediting_34299	chr1_28574527_+	ncRNA_intronic
CAediting_34300	chr1_28574541_+	ncRNA_intronic
CAediting_34301	chr1_28574577_+	ncRNA_intronic
CAediting_34302	chr1_28574589_+	ncRNA_exonic
CAediting_34303	chr1_28574593_+	ncRNA_exonic
CAediting_34304	chr1_28574601_+	ncRNA_exonic
CAediting_34305	chr1_28574604_+	ncRNA_exonic
CAediting_34306	chr1_28574613_+	ncRNA_exonic
CAediting_34307	chr1_28574643_+	ncRNA_exonic
CAediting_34308	chr1_28574665_+	ncRNA_exonic
CAediting_34309	chr1_28574666_+	ncRNA_exonic
CAediting_34310	chr1_28574678_+	ncRNA_exonic
CAediting_34311	chr1_28574684_+	ncRNA_exonic
CAediting_34312	chr1_28575195_+	ncRNA_intronic
CAediting_34313	chr1_28575198_+	ncRNA_intronic
CAediting_34314	chr1_28575216_+	ncRNA_intronic
CAediting_34315	chr1_28575235_+	ncRNA_intronic
CAediting_34316	chr1_28575248_+	ncRNA_intronic
CAediting_34317	chr1_28575254_+	ncRNA_intronic
CAediting_34318	chr1_28575255_+	ncRNA_intronic
CAediting_34319	chr1_28575284_+	ncRNA_intronic
CAediting_34320	chr1_28575294_+	ncRNA_intronic
CAediting_34321	chr1_28575339_+	ncRNA_intronic
CAediting_34322	chr1_28575355_+	ncRNA_intronic
CAediting_34323	chr1_28575580_+	ncRNA_intronic
CAediting_34324	chr1_28575941_+	ncRNA_intronic
CAediting_34325	chr1_28575978_+	ncRNA_intronic
CAediting_34326	chr1_28575990_+	ncRNA_intronic
CAediting_34327	chr1_28576002_+	ncRNA_intronic
CAediting_34328	chr1_28576058_+	ncRNA_intronic
CAediting_34329	chr1_28576061_+	ncRNA_intronic
CAediting_34330	chr1_28576070_+	ncRNA_intronic
CAediting_34331	chr1_28576121_+	ncRNA_intronic
CAediting_34332	chr1_28576185_+	ncRNA_intronic
CAediting_34333	chr1_28576247_+	ncRNA_intronic
CAediting_34334	chr1_28576253_+	ncRNA_intronic
CAediting_34335	chr1_28576254_+	ncRNA_intronic
CAediting_34336	chr1_28576419_+	ncRNA_intronic
CAediting_34337	chr1_28576485_+	ncRNA_intronic
CAediting_34338	chr1_28576578_+	ncRNA_intronic
CAediting_34339	chr1_28576600_+	ncRNA_intronic
CAediting_34340	chr1_28576700_+	ncRNA_intronic
CAediting_34341	chr1_28576717_+	ncRNA_intronic
CAediting_34342	chr1_28576745_+	ncRNA_intronic
CAediting_34343	chr1_28576873_+	ncRNA_intronic
CAediting_34344	chr1_28576945_+	ncRNA_intronic
CAediting_34345	chr1_28576946_+	ncRNA_intronic
CAediting_34346	chr1_28576954_+	ncRNA_intronic
CAediting_34347	chr1_28576967_+	ncRNA_intronic
CAediting_34348	chr1_28576968_+	ncRNA_intronic
CAediting_34349	chr1_28576975_+	ncRNA_intronic
CAediting_34350	chr1_28576981_+	ncRNA_intronic
CAediting_34351	chr1_28576986_+	ncRNA_intronic
CAediting_34352	chr1_28576987_+	ncRNA_intronic
CAediting_34353	chr1_28576991_+	ncRNA_intronic
CAediting_34354	chr1_28576992_+	ncRNA_intronic
CAediting_34355	chr1_28576999_+	ncRNA_intronic
CAediting_34356	chr1_28577018_+	ncRNA_intronic
CAediting_34357	chr1_28577031_+	ncRNA_intronic
CAediting_34358	chr1_28577046_+	ncRNA_intronic
CAediting_34359	chr1_28577048_+	ncRNA_intronic
CAediting_34360	chr1_28577050_+	ncRNA_intronic
CAediting_34361	chr1_28577053_+	ncRNA_intronic
CAediting_34362	chr1_28577054_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_34151	chr1_28554697_+	SINE	Alu	AluY
CAediting_34152	chr1_28554705_+	SINE	Alu	AluY
CAediting_34153	chr1_28554723_+	SINE	Alu	AluY
CAediting_34154	chr1_28554729_+	SINE	Alu	AluY
CAediting_34155	chr1_28555577_+	SINE	Alu	AluYc
CAediting_34156	chr1_28562680_+	SINE	Alu	AluY
CAediting_34157	chr1_28563428_+	SINE	Alu	AluSx1
CAediting_34158	chr1_28563613_+	SINE	Alu	AluSx1
CAediting_34159	chr1_28563616_+	SINE	Alu	AluSx1
CAediting_34160	chr1_28563741_+	SINE	Alu	AluSx3
CAediting_34161	chr1_28565252_+	SINE	Alu	AluSx3
CAediting_34162	chr1_28565419_+	SINE	Alu	AluSx3
CAediting_34163	chr1_28565467_+	SINE	Alu	AluSx3
CAediting_34164	chr1_28565634_+	SINE	Alu	AluSz6
CAediting_34165	chr1_28565639_+	SINE	Alu	AluSz6
CAediting_34166	chr1_28565707_+	SINE	Alu	AluSz6
CAediting_34167	chr1_28565742_+	SINE	Alu	AluSz6
CAediting_34168	chr1_28565744_+	SINE	Alu	AluSz6
CAediting_34169	chr1_28566168_+	SINE	Alu	AluSx
CAediting_34170	chr1_28566194_+	SINE	Alu	AluSx
CAediting_34171	chr1_28566223_+	SINE	Alu	AluSx
CAediting_34172	chr1_28566264_+	SINE	Alu	AluSx
CAediting_34173	chr1_28566265_+	SINE	Alu	AluSx
CAediting_34174	chr1_28566386_+	SINE	Alu	AluSx
CAediting_34175	chr1_28566389_+	SINE	Alu	AluSx
CAediting_34176	chr1_28566391_+	SINE	Alu	AluSx
CAediting_34177	chr1_28566498_+	SINE	Alu	AluY
CAediting_34178	chr1_28566667_+	SINE	Alu	AluY
CAediting_34179	chr1_28566742_+	SINE	Alu	AluY
CAediting_34180	chr1_28567902_+	SINE	Alu	AluSx
CAediting_34181	chr1_28567987_+	SINE	Alu	AluSx
CAediting_34182	chr1_28568013_+	SINE	Alu	AluSx
CAediting_34183	chr1_28568017_+	SINE	Alu	AluSx
CAediting_34184	chr1_28568021_+	SINE	Alu	AluSx
CAediting_34185	chr1_28568043_+	SINE	Alu	AluSx
CAediting_34186	chr1_28568152_+	SINE	Alu	AluSx
CAediting_34187	chr1_28568310_+	SINE	Alu	AluJo
CAediting_34188	chr1_28568393_+	SINE	Alu	AluJo
CAediting_34189	chr1_28568405_+	SINE	Alu	AluJo
CAediting_34190	chr1_28568509_+	SINE	Alu	AluJo
CAediting_34191	chr1_28568510_+	SINE	Alu	AluJo
CAediting_34192	chr1_28568513_+	SINE	Alu	AluJo
CAediting_34193	chr1_28568557_+	SINE	Alu	AluJo
CAediting_34194	chr1_28568863_+	SINE	Alu	AluSx
CAediting_34195	chr1_28569298_+	SINE	Alu	AluJr
CAediting_34196	chr1_28569537_+	SINE	Alu	AluY
CAediting_34197	chr1_28569548_+	SINE	Alu	AluY
CAediting_34198	chr1_28569890_+	SINE	Alu	AluY
CAediting_34199	chr1_28569946_+	SINE	Alu	AluY
CAediting_34200	chr1_28570015_+	SINE	Alu	AluY
CAediting_34201	chr1_28570047_+	SINE	Alu	AluSz
CAediting_34202	chr1_28570209_+	SINE	Alu	AluSx
CAediting_34203	chr1_28570309_+	SINE	Alu	AluSq
CAediting_34204	chr1_28570311_+	SINE	Alu	AluSq
CAediting_34205	chr1_28570312_+	SINE	Alu	AluSq
CAediting_34206	chr1_28570316_+	SINE	Alu	AluSq
CAediting_34207	chr1_28570341_+	SINE	Alu	AluSq
CAediting_34208	chr1_28570377_+	SINE	Alu	AluSq
CAediting_34209	chr1_28570491_+	SINE	Alu	AluSq
CAediting_34210	chr1_28570510_+	SINE	Alu	AluSq
CAediting_34211	chr1_28571015_+	SINE	Alu	AluSc8
CAediting_34212	chr1_28571040_+	SINE	Alu	AluSc8
CAediting_34213	chr1_28571620_+	SINE	Alu	AluSx1
CAediting_34214	chr1_28572224_+	SINE	Alu	AluSp
CAediting_34215	chr1_28572250_+	SINE	Alu	AluSp
CAediting_34216	chr1_28572263_+	SINE	Alu	AluSp
CAediting_34217	chr1_28572293_+	SINE	Alu	AluSp
CAediting_34218	chr1_28572294_+	SINE	Alu	AluSp
CAediting_34219	chr1_28572298_+	SINE	Alu	AluSp
CAediting_34220	chr1_28572323_+	SINE	Alu	AluSp
CAediting_34221	chr1_28572333_+	SINE	Alu	AluSp
CAediting_34222	chr1_28572343_+	SINE	Alu	AluSp
CAediting_34223	chr1_28572376_+	SINE	Alu	AluSp
CAediting_34224	chr1_28572379_+	SINE	Alu	AluSp
CAediting_34225	chr1_28572385_+	SINE	Alu	AluSp
CAediting_34226	chr1_28572476_+	SINE	Alu	AluSp
CAediting_34227	chr1_28572680_+	SINE	Alu	AluY
CAediting_34228	chr1_28572771_+	SINE	Alu	AluY
CAediting_34229	chr1_28572814_+	SINE	Alu	AluY
CAediting_34230	chr1_28572820_+	SINE	Alu	AluY
CAediting_34231	chr1_28572824_+	SINE	Alu	AluY
CAediting_34232	chr1_28572831_+	SINE	Alu	AluY
CAediting_34233	chr1_28572841_+	SINE	Alu	AluY
CAediting_34234	chr1_28572844_+	SINE	Alu	AluY
CAediting_34235	chr1_28572847_+	SINE	Alu	AluY
CAediting_34236	chr1_28572855_+	SINE	Alu	AluY
CAediting_34237	chr1_28572856_+	SINE	Alu	AluY
CAediting_34238	chr1_28572863_+	SINE	Alu	AluY
CAediting_34239	chr1_28572880_+	SINE	Alu	AluY
CAediting_34240	chr1_28572885_+	SINE	Alu	AluY
CAediting_34241	chr1_28572892_+	SINE	Alu	AluY
CAediting_34242	chr1_28572917_+	SINE	Alu	AluY
CAediting_34243	chr1_28572936_+	SINE	Alu	AluY
CAediting_34244	chr1_28572952_+	SINE	Alu	AluY
CAediting_34245	chr1_28573054_+	SINE	Alu	AluSg
CAediting_34246	chr1_28573086_+	SINE	Alu	AluSg
CAediting_34247	chr1_28573098_+	SINE	Alu	AluSg
CAediting_34248	chr1_28573208_+	SINE	Alu	AluSg
CAediting_34249	chr1_28573214_+	SINE	Alu	AluSg
CAediting_34250	chr1_28573217_+	SINE	Alu	AluSg
CAediting_34251	chr1_28573385_+	SINE	Alu	AluSc
CAediting_34252	chr1_28573407_+	SINE	Alu	AluSc
CAediting_34253	chr1_28573477_+	SINE	Alu	AluSc
CAediting_34254	chr1_28573478_+	SINE	Alu	AluSc
CAediting_34255	chr1_28573481_+	SINE	Alu	AluSc
CAediting_34256	chr1_28573484_+	SINE	Alu	AluSc
CAediting_34257	chr1_28573535_+	SINE	Alu	AluSx
CAediting_34258	chr1_28573572_+	SINE	Alu	AluSx
CAediting_34259	chr1_28573577_+	SINE	Alu	AluSx
CAediting_34260	chr1_28573611_+	SINE	Alu	AluSx
CAediting_34261	chr1_28573613_+	SINE	Alu	AluSx
CAediting_34262	chr1_28573618_+	SINE	Alu	AluSx
CAediting_34263	chr1_28573626_+	SINE	Alu	AluSx
CAediting_34264	chr1_28573650_+	SINE	Alu	AluSx
CAediting_34265	chr1_28573666_+	SINE	Alu	AluSx
CAediting_34266	chr1_28573708_+	SINE	Alu	AluSx
CAediting_34267	chr1_28573718_+	SINE	Alu	AluSx
CAediting_34268	chr1_28573817_+	SINE	Alu	AluSc
CAediting_34269	chr1_28573840_+	SINE	Alu	AluSc
CAediting_34270	chr1_28573858_+	SINE	Alu	AluSc
CAediting_34271	chr1_28573886_+	SINE	Alu	AluSc
CAediting_34272	chr1_28573887_+	SINE	Alu	AluSc
CAediting_34273	chr1_28573890_+	SINE	Alu	AluSc
CAediting_34275	chr1_28573980_+	SINE	Alu	AluJo
CAediting_34276	chr1_28574001_+	SINE	Alu	AluJo
CAediting_34277	chr1_28574034_+	SINE	Alu	AluJo
CAediting_34278	chr1_28574048_+	SINE	Alu	AluJo
CAediting_34279	chr1_28574157_+	SINE	Alu	AluSz
CAediting_34280	chr1_28574181_+	SINE	Alu	AluSz
CAediting_34281	chr1_28574205_+	SINE	Alu	AluSz
CAediting_34282	chr1_28574217_+	SINE	Alu	AluSz
CAediting_34283	chr1_28574229_+	SINE	Alu	AluSz
CAediting_34284	chr1_28574271_+	SINE	Alu	AluSz
CAediting_34285	chr1_28574277_+	SINE	Alu	AluSz
CAediting_34286	chr1_28574285_+	SINE	Alu	AluSz
CAediting_34287	chr1_28574297_+	SINE	Alu	AluSz
CAediting_34288	chr1_28574322_+	SINE	Alu	AluSz
CAediting_34289	chr1_28574323_+	SINE	Alu	AluSz
CAediting_34290	chr1_28574326_+	SINE	Alu	AluSz
CAediting_34291	chr1_28574340_+	SINE	Alu	AluSz
CAediting_34292	chr1_28574349_+	SINE	Alu	AluSz
CAediting_34293	chr1_28574350_+	SINE	Alu	AluSz
CAediting_34294	chr1_28574447_+	SINE	Alu	AluJb
CAediting_34295	chr1_28574448_+	SINE	Alu	AluJb
CAediting_34296	chr1_28574473_+	SINE	Alu	AluJb
CAediting_34297	chr1_28574488_+	SINE	Alu	AluJb
CAediting_34298	chr1_28574492_+	SINE	Alu	AluJb
CAediting_34299	chr1_28574527_+	SINE	Alu	AluJb
CAediting_34300	chr1_28574541_+	SINE	Alu	AluJb
CAediting_34301	chr1_28574577_+	SINE	Alu	AluJb
CAediting_34302	chr1_28574589_+	SINE	Alu	AluJb
CAediting_34303	chr1_28574593_+	SINE	Alu	AluJb
CAediting_34304	chr1_28574601_+	SINE	Alu	AluJb
CAediting_34305	chr1_28574604_+	SINE	Alu	AluJb
CAediting_34306	chr1_28574613_+	SINE	Alu	AluJb
CAediting_34307	chr1_28574643_+	SINE	Alu	AluJb
CAediting_34308	chr1_28574665_+	SINE	Alu	AluJb
CAediting_34309	chr1_28574666_+	SINE	Alu	AluJb
CAediting_34310	chr1_28574678_+	SINE	Alu	AluJb
CAediting_34311	chr1_28574684_+	SINE	Alu	AluJb
CAediting_34312	chr1_28575195_+	SINE	Alu	AluSc
CAediting_34313	chr1_28575198_+	SINE	Alu	AluSc
CAediting_34314	chr1_28575216_+	SINE	Alu	AluSc
CAediting_34315	chr1_28575235_+	SINE	Alu	AluSc
CAediting_34316	chr1_28575248_+	SINE	Alu	AluSc
CAediting_34317	chr1_28575254_+	SINE	Alu	AluSc
CAediting_34318	chr1_28575255_+	SINE	Alu	AluSc
CAediting_34319	chr1_28575284_+	SINE	Alu	AluSc
CAediting_34320	chr1_28575294_+	SINE	Alu	AluSc
CAediting_34321	chr1_28575339_+	SINE	Alu	AluSc
CAediting_34322	chr1_28575355_+	SINE	Alu	AluSc
CAediting_34323	chr1_28575580_+	SINE	Alu	AluSq
CAediting_34324	chr1_28575941_+	SINE	Alu	AluSc
CAediting_34325	chr1_28575978_+	SINE	Alu	AluSc
CAediting_34326	chr1_28575990_+	SINE	Alu	AluSc
CAediting_34327	chr1_28576002_+	SINE	Alu	AluSc
CAediting_34328	chr1_28576058_+	SINE	Alu	AluSc
CAediting_34329	chr1_28576061_+	SINE	Alu	AluSc
CAediting_34330	chr1_28576070_+	SINE	Alu	AluSc
CAediting_34331	chr1_28576121_+	SINE	Alu	AluSc
CAediting_34332	chr1_28576185_+	SINE	Alu	AluJb
CAediting_34333	chr1_28576247_+	SINE	Alu	AluJb
CAediting_34334	chr1_28576253_+	SINE	Alu	AluJb
CAediting_34335	chr1_28576254_+	SINE	Alu	AluJb
CAediting_34336	chr1_28576419_+	SINE	Alu	AluSc
CAediting_34337	chr1_28576485_+	SINE	Alu	AluSc
CAediting_34338	chr1_28576578_+	SINE	Alu	AluSc
CAediting_34339	chr1_28576600_+	SINE	Alu	AluSc
CAediting_34340	chr1_28576700_+	SINE	Alu	AluSp
CAediting_34341	chr1_28576717_+	SINE	Alu	AluSp
CAediting_34342	chr1_28576745_+	SINE	Alu	AluSp
CAediting_34343	chr1_28576873_+	SINE	Alu	AluSp
CAediting_34344	chr1_28576945_+	SINE	Alu	FRAM
CAediting_34345	chr1_28576946_+	SINE	Alu	FRAM
CAediting_34346	chr1_28576954_+	SINE	Alu	FRAM
CAediting_34347	chr1_28576967_+	SINE	Alu	FRAM
CAediting_34348	chr1_28576968_+	SINE	Alu	FRAM
CAediting_34349	chr1_28576975_+	SINE	Alu	FRAM
CAediting_34350	chr1_28576981_+	SINE	Alu	FRAM
CAediting_34351	chr1_28576986_+	SINE	Alu	FRAM
CAediting_34352	chr1_28576987_+	SINE	Alu	FRAM
CAediting_34353	chr1_28576991_+	SINE	Alu	FRAM
CAediting_34354	chr1_28576992_+	SINE	Alu	FRAM
CAediting_34355	chr1_28576999_+	SINE	Alu	FRAM
CAediting_34356	chr1_28577018_+	SINE	Alu	FRAM
CAediting_34357	chr1_28577031_+	SINE	Alu	FRAM
CAediting_34358	chr1_28577046_+	SINE	Alu	FRAM
CAediting_34359	chr1_28577048_+	SINE	Alu	FRAM
CAediting_34360	chr1_28577050_+	SINE	Alu	FRAM
CAediting_34361	chr1_28577053_+	SINE	Alu	FRAM
CAediting_34362	chr1_28577054_+	SINE	Alu	FRAM

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RNA A-to-I editing events in the alternative splicing sites for TRNAU1AP

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_34301	chr1_28574577_+	28574568:28574590	3SS	0+11i	TTTTTTTCTATTTTTTTGTAGAG	-12.21	TTTTTTTCTGTTTTTTTGTAGAG	-10.76
ES	CAediting_34302	chr1_28574589_+	28574568:28574590	3SS	2+0i	TTTTTTTCTATTTTTTTGTAGAG	-12.21	TTTTTTTCTATTTTTTTGTAGGG	-17.52

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000180098.8.TRNAU1AP.

Correlation between RNA A-to-I editing and PSI for ENSG00000180098.8.TRNAU1AP.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TRNAU1AP

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

KIRC.CAediting_34350.ENSG00000180098.TRNAU1AP.png
Soverview

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Protein coding region RNA A-to-I editings for TRNAU1AP

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TRNAU1AP

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229413	chr17_67471544_+	ENSG00000180098.8	ENST00000373830	hsa-miR-548aa	28577843	28577849	7mer-m8	28577826	28577850	153	-12.96
CAediting_442554	chr5_154685830_+	ENSG00000180098.8	ENST00000373830	hsa-miR-1303	28578426	28578433	8mer-1a	28578412	28578433	140	-12.14

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TRNAU1AP

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000464093.1	processed_transcript
ENST00000495995.4	processed_transcript
ENST00000484775.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_34161	ENST00000464093.1	chr1_28565252_+	-518.00	-516.90	-518.60
CAediting_34162	ENST00000464093.1	chr1_28565419_+	-517.30	-516.90	-518.60
CAediting_34163	ENST00000464093.1	chr1_28565467_+	-516.40	-516.90	-518.60
CAediting_34161	ENST00000495995.4	chr1_28565252_+	-778.60	-776.60	-789.20
CAediting_34162	ENST00000495995.4	chr1_28565419_+	-777.00	-776.60	-789.20
CAediting_34163	ENST00000495995.4	chr1_28565467_+	-778.10	-776.60	-789.20
CAediting_34164	ENST00000495995.4	chr1_28565634_+	-778.10	-776.60	-789.20
CAediting_34165	ENST00000495995.4	chr1_28565639_+	-776.60	-776.60	-789.20
CAediting_34166	ENST00000495995.4	chr1_28565707_+	-777.40	-776.60	-789.20
CAediting_34167	ENST00000495995.4	chr1_28565742_+	-776.20	-776.60	-789.20
CAediting_34168	ENST00000495995.4	chr1_28565744_+	-780.90	-776.60	-789.20
CAediting_34302	ENST00000484775.1	chr1_28574589_+	-325.70	-322.60	-332.70
CAediting_34303	ENST00000484775.1	chr1_28574593_+	-323.40	-322.60	-332.70
CAediting_34304	ENST00000484775.1	chr1_28574601_+	-322.80	-322.60	-332.70
CAediting_34305	ENST00000484775.1	chr1_28574604_+	-323.90	-322.60	-332.70
CAediting_34306	ENST00000484775.1	chr1_28574613_+	-324.90	-322.60	-332.70
CAediting_34307	ENST00000484775.1	chr1_28574643_+	-323.20	-322.60	-332.70
CAediting_34308	ENST00000484775.1	chr1_28574665_+	-323.10	-322.60	-332.70
CAediting_34309	ENST00000484775.1	chr1_28574666_+	-325.90	-322.60	-332.70
CAediting_34310	ENST00000484775.1	chr1_28574678_+	-322.90	-322.60	-332.70
CAediting_34311	ENST00000484775.1	chr1_28574684_+	-322.20	-322.60	-332.70

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Relation with ADAR for TRNAU1AP

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for TRNAU1AP

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
KIRC	pathologic_stage	CAediting_34350	chr1_28576981_+	0.015020551424286	0.250174495472754

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Relation with survival for TRNAU1AP

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for TRNAU1AP

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TRNAU1AP

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene