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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: BIVM (CAeditome ID:54841)

Gene summary for BIVM

check button Gene summary
Gene informationGene symbol

BIVM

Gene ID

54841

Gene namebasic, immunoglobulin-like variable motif containing
Synonyms-
Cytomap

13q33.1

Type of geneprotein-coding
Descriptionbasic immunoglobulin-like variable motif-containing protein
Modification date20210518
UniProtAcc

Q86UB2

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for BIVM

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000134897.12

check button RNA A-to-I editing events in Cancer.
CAediting_972151(102801365, +), CAediting_972152(102801375, +), CAediting_972153(102801434, +), CAediting_972154(102801437, +), CAediting_972155(102801440, +), CAediting_972156(102801450, +), CAediting_972157(102801462, +), CAediting_972158(102801474, +), CAediting_972159(102801505, +), CAediting_972160(102801513, +), CAediting_972161(102801514, +), CAediting_972162(102801515, +), CAediting_972163(102801527, +), CAediting_972164(102802845, +), CAediting_972165(102802846, +), CAediting_972166(102802863, +), CAediting_972167(102802878, +), CAediting_972168(102802885, +), CAediting_972169(102803067, +), CAediting_972170(102803068, +), CAediting_972171(102803084, +), CAediting_972172(102803090, +), CAediting_972173(102803109, +), CAediting_972174(102803113, +), CAediting_972175(102803114, +), CAediting_972176(102803132, +), CAediting_972177(102803145, +), CAediting_972178(102803231, +), CAediting_972179(102803239, +), CAediting_972180(102803245, +), CAediting_972181(102803247, +), CAediting_972182(102803248, +), CAediting_972183(102803270, +), CAediting_972184(102803278, +), CAediting_972185(102803288, +), CAediting_972186(102803302, +), CAediting_972187(102803307, +), CAediting_972188(102803327, +), CAediting_972189(102803332, +), CAediting_972190(102803341, +), CAediting_972191(102803347, +), CAediting_972192(102803360, +), CAediting_972193(102803382, +), CAediting_972194(102803383, +), CAediting_972195(102803392, +), CAediting_972196(102803409, +), CAediting_972197(102803415, +), CAediting_972198(102803424, +), CAediting_972199(102803428, +), CAediting_972200(102803455, +), CAediting_972201(102803482, +), CAediting_972202(102804191, +), CAediting_972203(102804203, +), CAediting_972204(102804262, +), CAediting_972205(102804274, +), CAediting_972206(102804284, +), CAediting_972207(102804311, +), CAediting_972208(102804312, +), CAediting_972209(102804318, +), CAediting_972210(102804397, +), CAediting_972211(102804410, +), CAediting_972212(102804428, +), CAediting_972213(102804440, +), CAediting_972214(102804450, +), CAediting_972215(102804452, +), CAediting_972216(102804472, +), CAediting_972217(102804554, +), CAediting_972218(102804632, +), CAediting_972219(102804662, +), CAediting_972220(102804669, +), CAediting_972221(102804674, +), CAediting_972222(102804712, +), CAediting_972223(102804722, +), CAediting_972224(102806298, +), CAediting_972225(102806324, +), CAediting_972226(102806330, +), CAediting_972227(102806350, +), CAediting_972228(102806430, +), CAediting_972229(102806433, +), CAediting_972230(102806511, +), CAediting_972231(102806656, +), CAediting_972232(102806696, +), CAediting_972233(102820280, +), CAediting_972234(102831766, +), CAediting_972235(102831775, +), CAediting_972236(102831821, +), CAediting_972237(102831924, +), CAediting_972238(102831930, +), CAediting_972239(102832476, +), CAediting_972240(102832492, +), CAediting_972241(102832995, +), CAediting_972242(102833026, +), CAediting_972243(102833132, +), CAediting_972244(102833138, +), CAediting_972245(102833148, +), CAediting_972246(102833469, +), CAediting_972247(102833473, +), CAediting_972248(102833528, +), CAediting_972249(102833585, +), CAediting_972250(102835129, +), CAediting_972251(102835197, +), CAediting_972252(102835238, +), CAediting_972253(102835256, +), CAediting_972254(102835273, +), CAediting_972255(102835275, +), CAediting_972256(102835552, +), CAediting_972257(102835603, +), CAediting_972258(102835608, +), CAediting_972259(102835612, +), CAediting_972260(102835613, +), CAediting_972261(102835626, +), CAediting_972262(102835674, +), CAediting_972263(102835694, +), CAediting_972264(102835699, +), CAediting_972265(102835716, +), CAediting_972266(102835733, +), CAediting_972267(102835753, +), CAediting_972268(102835754, +), CAediting_972269(102835768, +), CAediting_972270(102835795, +), CAediting_972271(102836356, +), CAediting_972272(102836412, +), CAediting_972273(102836413, +), CAediting_972274(102836425, +), CAediting_972275(102836442, +), CAediting_972276(102836454, +), CAediting_972277(102836497, +), CAediting_972278(102836576, +), CAediting_972279(102836588, +), CAediting_972280(102837032, +), CAediting_972281(102837058, +), CAediting_972282(102837063, +), CAediting_972283(102837082, +), CAediting_972284(102837107, +), CAediting_972285(102837113, +), CAediting_972286(102837116, +), CAediting_972287(102837117, +), CAediting_972288(102837124, +), CAediting_972289(102837125, +), CAediting_972290(102837128, +), CAediting_972291(102837135, +), CAediting_972292(102837139, +), CAediting_972293(102837157, +), CAediting_972294(102837163, +), CAediting_972295(102837167, +), CAediting_972296(102837194, +), CAediting_972297(102837228, +), CAediting_972298(102837238, +), CAediting_972299(102837253, +), CAediting_972300(102837254, +), CAediting_972301(102837683, +), CAediting_972302(102837699, +), CAediting_972303(102840484, +), CAediting_972304(102840496, +), CAediting_972305(102840497, +), CAediting_972306(102840518, +), CAediting_972307(102840521, +), CAediting_972308(102840522, +), CAediting_972309(102840527, +), CAediting_972310(102840537, +), CAediting_972311(102840547, +), CAediting_972312(102840557, +), CAediting_972313(102840563, +), CAediting_972314(102840573, +), CAediting_972315(102840590, +), CAediting_972316(102840593, +), CAediting_972317(102840596, +), CAediting_972318(102840605, +), CAediting_972319(102840618, +), CAediting_972320(102840666, +), CAediting_972321(102840671, +),

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RNA editing positional annotations for BIVM using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_972151chr13_102801365_+ncRNA_intronic
CAediting_972152chr13_102801375_+ncRNA_intronic
CAediting_972153chr13_102801434_+ncRNA_intronic
CAediting_972154chr13_102801437_+ncRNA_intronic
CAediting_972155chr13_102801440_+ncRNA_intronic
CAediting_972156chr13_102801450_+ncRNA_intronic
CAediting_972157chr13_102801462_+ncRNA_intronic
CAediting_972158chr13_102801474_+ncRNA_intronic
CAediting_972159chr13_102801505_+ncRNA_exonic
CAediting_972160chr13_102801513_+ncRNA_exonic
CAediting_972161chr13_102801514_+ncRNA_exonic
CAediting_972162chr13_102801515_+ncRNA_exonic
CAediting_972163chr13_102801527_+ncRNA_exonic
CAediting_972164chr13_102802845_+ncRNA_intronic
CAediting_972165chr13_102802846_+ncRNA_intronic
CAediting_972166chr13_102802863_+ncRNA_intronic
CAediting_972167chr13_102802878_+ncRNA_intronic
CAediting_972168chr13_102802885_+ncRNA_intronic
CAediting_972169chr13_102803067_+ncRNA_intronic
CAediting_972170chr13_102803068_+ncRNA_intronic
CAediting_972171chr13_102803084_+ncRNA_intronic
CAediting_972172chr13_102803090_+ncRNA_intronic
CAediting_972173chr13_102803109_+ncRNA_intronic
CAediting_972174chr13_102803113_+ncRNA_intronic
CAediting_972175chr13_102803114_+ncRNA_intronic
CAediting_972176chr13_102803132_+ncRNA_intronic
CAediting_972177chr13_102803145_+ncRNA_intronic
CAediting_972178chr13_102803231_+ncRNA_intronic
CAediting_972179chr13_102803239_+ncRNA_intronic
CAediting_972180chr13_102803245_+ncRNA_intronic
CAediting_972181chr13_102803247_+ncRNA_intronic
CAediting_972182chr13_102803248_+ncRNA_intronic
CAediting_972183chr13_102803270_+ncRNA_intronic
CAediting_972184chr13_102803278_+ncRNA_intronic
CAediting_972185chr13_102803288_+ncRNA_intronic
CAediting_972186chr13_102803302_+ncRNA_intronic
CAediting_972187chr13_102803307_+ncRNA_intronic
CAediting_972188chr13_102803327_+ncRNA_intronic
CAediting_972189chr13_102803332_+ncRNA_intronic
CAediting_972190chr13_102803341_+ncRNA_intronic
CAediting_972191chr13_102803347_+ncRNA_intronic
CAediting_972192chr13_102803360_+ncRNA_intronic
CAediting_972193chr13_102803382_+ncRNA_intronic
CAediting_972194chr13_102803383_+ncRNA_intronic
CAediting_972195chr13_102803392_+ncRNA_intronic
CAediting_972196chr13_102803409_+ncRNA_intronic
CAediting_972197chr13_102803415_+ncRNA_intronic
CAediting_972198chr13_102803424_+ncRNA_intronic
CAediting_972199chr13_102803428_+ncRNA_intronic
CAediting_972200chr13_102803455_+ncRNA_intronic
CAediting_972201chr13_102803482_+ncRNA_intronic
CAediting_972202chr13_102804191_+ncRNA_intronic
CAediting_972203chr13_102804203_+ncRNA_intronic
CAediting_972204chr13_102804262_+ncRNA_intronic
CAediting_972205chr13_102804274_+ncRNA_intronic
CAediting_972206chr13_102804284_+ncRNA_intronic
CAediting_972207chr13_102804311_+ncRNA_intronic
CAediting_972208chr13_102804312_+ncRNA_intronic
CAediting_972209chr13_102804318_+ncRNA_intronic
CAediting_972210chr13_102804397_+ncRNA_intronic
CAediting_972211chr13_102804410_+ncRNA_intronic
CAediting_972212chr13_102804428_+ncRNA_intronic
CAediting_972213chr13_102804440_+ncRNA_intronic
CAediting_972214chr13_102804450_+ncRNA_intronic
CAediting_972215chr13_102804452_+ncRNA_intronic
CAediting_972216chr13_102804472_+ncRNA_intronic
CAediting_972217chr13_102804554_+ncRNA_intronic
CAediting_972218chr13_102804632_+ncRNA_intronic
CAediting_972219chr13_102804662_+ncRNA_intronic
CAediting_972220chr13_102804669_+ncRNA_intronic
CAediting_972221chr13_102804674_+ncRNA_intronic
CAediting_972222chr13_102804712_+ncRNA_intronic
CAediting_972223chr13_102804722_+ncRNA_intronic
CAediting_972224chr13_102806298_+ncRNA_intronic
CAediting_972225chr13_102806324_+ncRNA_intronic
CAediting_972226chr13_102806330_+ncRNA_intronic
CAediting_972227chr13_102806350_+ncRNA_intronic
CAediting_972228chr13_102806430_+ncRNA_intronic
CAediting_972229chr13_102806433_+ncRNA_intronic
CAediting_972230chr13_102806511_+ncRNA_intronic
CAediting_972231chr13_102806656_+ncRNA_intronic
CAediting_972232chr13_102806696_+ncRNA_intronic
CAediting_972233chr13_102820280_+intronic
CAediting_972234chr13_102831766_+ncRNA_intronic
CAediting_972235chr13_102831775_+ncRNA_intronic
CAediting_972236chr13_102831821_+ncRNA_intronic
CAediting_972237chr13_102831924_+ncRNA_intronic
CAediting_972238chr13_102831930_+ncRNA_intronic
CAediting_972239chr13_102832476_+ncRNA_intronic
CAediting_972240chr13_102832492_+ncRNA_intronic
CAediting_972241chr13_102832995_+ncRNA_intronic
CAediting_972242chr13_102833026_+ncRNA_intronic
CAediting_972243chr13_102833132_+ncRNA_intronic
CAediting_972244chr13_102833138_+ncRNA_intronic
CAediting_972245chr13_102833148_+ncRNA_intronic
CAediting_972246chr13_102833469_+ncRNA_intronic
CAediting_972247chr13_102833473_+ncRNA_intronic
CAediting_972248chr13_102833528_+ncRNA_intronic
CAediting_972249chr13_102833585_+ncRNA_intronic
CAediting_972250chr13_102835129_+ncRNA_intronic
CAediting_972251chr13_102835197_+ncRNA_intronic
CAediting_972252chr13_102835238_+ncRNA_intronic
CAediting_972253chr13_102835256_+ncRNA_intronic
CAediting_972254chr13_102835273_+ncRNA_intronic
CAediting_972255chr13_102835275_+ncRNA_intronic
CAediting_972256chr13_102835552_+ncRNA_intronic
CAediting_972257chr13_102835603_+ncRNA_intronic
CAediting_972258chr13_102835608_+ncRNA_intronic
CAediting_972259chr13_102835612_+ncRNA_intronic
CAediting_972260chr13_102835613_+ncRNA_intronic
CAediting_972261chr13_102835626_+ncRNA_intronic
CAediting_972262chr13_102835674_+ncRNA_intronic
CAediting_972263chr13_102835694_+ncRNA_intronic
CAediting_972264chr13_102835699_+ncRNA_intronic
CAediting_972265chr13_102835716_+ncRNA_intronic
CAediting_972266chr13_102835733_+ncRNA_intronic
CAediting_972267chr13_102835753_+ncRNA_intronic
CAediting_972268chr13_102835754_+ncRNA_intronic
CAediting_972269chr13_102835768_+ncRNA_intronic
CAediting_972270chr13_102835795_+ncRNA_intronic
CAediting_972271chr13_102836356_+ncRNA_intronic
CAediting_972272chr13_102836412_+ncRNA_intronic
CAediting_972273chr13_102836413_+ncRNA_intronic
CAediting_972274chr13_102836425_+ncRNA_intronic
CAediting_972275chr13_102836442_+ncRNA_intronic
CAediting_972276chr13_102836454_+ncRNA_intronic
CAediting_972277chr13_102836497_+ncRNA_intronic
CAediting_972278chr13_102836576_+ncRNA_intronic
CAediting_972279chr13_102836588_+ncRNA_intronic
CAediting_972280chr13_102837032_+ncRNA_intronic
CAediting_972281chr13_102837058_+ncRNA_intronic
CAediting_972282chr13_102837063_+ncRNA_intronic
CAediting_972283chr13_102837082_+ncRNA_intronic
CAediting_972284chr13_102837107_+ncRNA_intronic
CAediting_972285chr13_102837113_+ncRNA_intronic
CAediting_972286chr13_102837116_+ncRNA_intronic
CAediting_972287chr13_102837117_+ncRNA_intronic
CAediting_972288chr13_102837124_+ncRNA_intronic
CAediting_972289chr13_102837125_+ncRNA_intronic
CAediting_972290chr13_102837128_+ncRNA_intronic
CAediting_972291chr13_102837135_+ncRNA_intronic
CAediting_972292chr13_102837139_+ncRNA_intronic
CAediting_972293chr13_102837157_+ncRNA_intronic
CAediting_972294chr13_102837163_+ncRNA_intronic
CAediting_972295chr13_102837167_+ncRNA_intronic
CAediting_972296chr13_102837194_+ncRNA_intronic
CAediting_972297chr13_102837228_+ncRNA_intronic
CAediting_972298chr13_102837238_+ncRNA_intronic
CAediting_972299chr13_102837253_+ncRNA_intronic
CAediting_972300chr13_102837254_+ncRNA_intronic
CAediting_972301chr13_102837683_+ncRNA_intronic
CAediting_972302chr13_102837699_+ncRNA_intronic
CAediting_972303chr13_102840484_+UTR3
CAediting_972304chr13_102840496_+UTR3
CAediting_972305chr13_102840497_+UTR3
CAediting_972306chr13_102840518_+UTR3
CAediting_972307chr13_102840521_+UTR3
CAediting_972308chr13_102840522_+UTR3
CAediting_972309chr13_102840527_+UTR3
CAediting_972310chr13_102840537_+UTR3
CAediting_972311chr13_102840547_+UTR3
CAediting_972312chr13_102840557_+UTR3
CAediting_972313chr13_102840563_+UTR3
CAediting_972314chr13_102840573_+UTR3
CAediting_972315chr13_102840590_+UTR3
CAediting_972316chr13_102840593_+UTR3
CAediting_972317chr13_102840596_+UTR3
CAediting_972318chr13_102840605_+UTR3
CAediting_972319chr13_102840618_+UTR3
CAediting_972320chr13_102840666_+UTR3
CAediting_972321chr13_102840671_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_972151chr13_102801365_+SINEAluAluSq2
CAediting_972152chr13_102801375_+SINEAluAluSq2
CAediting_972153chr13_102801434_+SINEAluAluSq2
CAediting_972154chr13_102801437_+SINEAluAluSq2
CAediting_972155chr13_102801440_+SINEAluAluSq2
CAediting_972156chr13_102801450_+SINEAluAluSq2
CAediting_972157chr13_102801462_+SINEAluAluSq2
CAediting_972158chr13_102801474_+SINEAluAluSq2
CAediting_972159chr13_102801505_+SINEAluAluSq2
CAediting_972160chr13_102801513_+SINEAluAluSq2
CAediting_972161chr13_102801514_+SINEAluAluSq2
CAediting_972162chr13_102801515_+SINEAluAluSq2
CAediting_972163chr13_102801527_+SINEAluAluSq2
CAediting_972164chr13_102802845_+SINEAluAluJo
CAediting_972165chr13_102802846_+SINEAluAluJo
CAediting_972166chr13_102802863_+SINEAluAluJo
CAediting_972167chr13_102802878_+SINEAluAluJo
CAediting_972168chr13_102802885_+SINEAluAluJo
CAediting_972169chr13_102803067_+SINEAluFLAM_C
CAediting_972170chr13_102803068_+SINEAluFLAM_C
CAediting_972171chr13_102803084_+SINEAluFLAM_C
CAediting_972172chr13_102803090_+SINEAluFLAM_C
CAediting_972173chr13_102803109_+SINEAluFLAM_C
CAediting_972174chr13_102803113_+SINEAluFLAM_C
CAediting_972175chr13_102803114_+SINEAluFLAM_C
CAediting_972176chr13_102803132_+SINEAluFLAM_C
CAediting_972177chr13_102803145_+SINEAluFLAM_C
CAediting_972178chr13_102803231_+SINEAluAluSx
CAediting_972179chr13_102803239_+SINEAluAluSx
CAediting_972180chr13_102803245_+SINEAluAluSx
CAediting_972181chr13_102803247_+SINEAluAluSx
CAediting_972182chr13_102803248_+SINEAluAluSx
CAediting_972183chr13_102803270_+SINEAluAluSx
CAediting_972184chr13_102803278_+SINEAluAluSx
CAediting_972185chr13_102803288_+SINEAluAluSx
CAediting_972186chr13_102803302_+SINEAluAluSx
CAediting_972187chr13_102803307_+SINEAluAluSx
CAediting_972188chr13_102803327_+SINEAluAluSx
CAediting_972189chr13_102803332_+SINEAluAluSx
CAediting_972190chr13_102803341_+SINEAluAluSx
CAediting_972191chr13_102803347_+SINEAluAluSx
CAediting_972192chr13_102803360_+SINEAluAluSx
CAediting_972193chr13_102803382_+SINEAluAluSx
CAediting_972194chr13_102803383_+SINEAluAluSx
CAediting_972195chr13_102803392_+SINEAluAluSx
CAediting_972196chr13_102803409_+SINEAluAluSx
CAediting_972197chr13_102803415_+SINEAluAluSx
CAediting_972198chr13_102803424_+SINEAluAluSx
CAediting_972199chr13_102803428_+SINEAluAluSx
CAediting_972200chr13_102803455_+SINEAluAluSx
CAediting_972201chr13_102803482_+SINEAluAluSx
CAediting_972202chr13_102804191_+SINEAluAluSz
CAediting_972203chr13_102804203_+SINEAluAluSz
CAediting_972204chr13_102804262_+SINEAluAluSz
CAediting_972205chr13_102804274_+SINEAluAluSz
CAediting_972206chr13_102804284_+SINEAluAluSz
CAediting_972207chr13_102804311_+SINEAluAluSz
CAediting_972208chr13_102804312_+SINEAluAluSz
CAediting_972209chr13_102804318_+SINEAluAluSx3
CAediting_972210chr13_102804397_+SINEAluAluSx3
CAediting_972211chr13_102804410_+SINEAluAluSx3
CAediting_972212chr13_102804428_+SINEAluAluSx3
CAediting_972213chr13_102804440_+SINEAluAluSx3
CAediting_972214chr13_102804450_+SINEAluAluSx3
CAediting_972215chr13_102804452_+SINEAluAluSx3
CAediting_972216chr13_102804472_+SINEAluAluSx3
CAediting_972217chr13_102804554_+SINEAluAluSx3
CAediting_972218chr13_102804632_+SINEAluAluSz
CAediting_972219chr13_102804662_+SINEAluAluSz
CAediting_972220chr13_102804669_+SINEAluAluSz
CAediting_972221chr13_102804674_+SINEAluAluSz
CAediting_972222chr13_102804712_+SINEAluAluSz
CAediting_972223chr13_102804722_+SINEAluAluSz
CAediting_972224chr13_102806298_+SINEAluAluSz
CAediting_972225chr13_102806324_+SINEAluAluSz
CAediting_972226chr13_102806330_+SINEAluAluSz
CAediting_972227chr13_102806350_+SINEAluAluSz
CAediting_972228chr13_102806430_+SINEAluAluSz
CAediting_972229chr13_102806433_+SINEAluAluSz
CAediting_972230chr13_102806511_+SINEAluAluSz
CAediting_972231chr13_102806656_+SINEAluAluSp
CAediting_972232chr13_102806696_+SINEAluAluSp
CAediting_972233chr13_102820280_+SINEAluAluSc
CAediting_972234chr13_102831766_+SINEAluAluY
CAediting_972235chr13_102831775_+SINEAluAluY
CAediting_972236chr13_102831821_+SINEAluAluY
CAediting_972237chr13_102831924_+SINEAluAluY
CAediting_972238chr13_102831930_+SINEAluAluY
CAediting_972239chr13_102832476_+SINEAluAluJo
CAediting_972240chr13_102832492_+SINEAluAluJo
CAediting_972241chr13_102832995_+SINEAluAluJo
CAediting_972242chr13_102833026_+SINEAluAluJo
CAediting_972243chr13_102833132_+SINEAluAluJo
CAediting_972244chr13_102833138_+SINEAluAluJo
CAediting_972245chr13_102833148_+SINEAluAluJo
CAediting_972246chr13_102833469_+SINEAluAluJb
CAediting_972247chr13_102833473_+SINEAluAluJb
CAediting_972248chr13_102833528_+SINEAluAluJb
CAediting_972249chr13_102833585_+SINEAluAluJb
CAediting_972250chr13_102835129_+SINEAluAluJr4
CAediting_972251chr13_102835197_+SINEAluAluJr4
CAediting_972252chr13_102835238_+SINEAluAluJb
CAediting_972253chr13_102835256_+SINEAluAluJb
CAediting_972254chr13_102835273_+SINEAluAluJb
CAediting_972255chr13_102835275_+SINEAluAluJb
CAediting_972256chr13_102835552_+SINEAluAluSx1
CAediting_972257chr13_102835603_+SINEAluAluSx1
CAediting_972258chr13_102835608_+SINEAluAluSx1
CAediting_972259chr13_102835612_+SINEAluAluSx1
CAediting_972260chr13_102835613_+SINEAluAluSx1
CAediting_972261chr13_102835626_+SINEAluAluSx1
CAediting_972262chr13_102835674_+SINEAluAluSx1
CAediting_972263chr13_102835694_+SINEAluAluSx1
CAediting_972264chr13_102835699_+SINEAluAluSx1
CAediting_972265chr13_102835716_+SINEAluAluSx1
CAediting_972266chr13_102835733_+SINEAluAluSx1
CAediting_972267chr13_102835753_+SINEAluAluSx1
CAediting_972268chr13_102835754_+SINEAluAluSx1
CAediting_972269chr13_102835768_+SINEAluAluSx1
CAediting_972270chr13_102835795_+SINEAluAluSx1
CAediting_972271chr13_102836356_+SINEAluAluJr
CAediting_972272chr13_102836412_+SINEAluAluJr
CAediting_972273chr13_102836413_+SINEAluAluJr
CAediting_972274chr13_102836425_+SINEAluAluJr
CAediting_972275chr13_102836442_+SINEAluAluJr
CAediting_972276chr13_102836454_+SINEAluAluJr
CAediting_972277chr13_102836497_+SINEAluAluJr
CAediting_972278chr13_102836576_+SINEAluAluJr
CAediting_972279chr13_102836588_+SINEAluAluJr
CAediting_972280chr13_102837032_+SINEAluAluJb
CAediting_972281chr13_102837058_+SINEAluAluJb
CAediting_972282chr13_102837063_+SINEAluAluJb
CAediting_972283chr13_102837082_+SINEAluAluJb
CAediting_972284chr13_102837107_+SINEAluAluJb
CAediting_972285chr13_102837113_+SINEAluAluJb
CAediting_972286chr13_102837116_+SINEAluAluJb
CAediting_972287chr13_102837117_+SINEAluAluJb
CAediting_972288chr13_102837124_+SINEAluAluJb
CAediting_972289chr13_102837125_+SINEAluAluJb
CAediting_972290chr13_102837128_+SINEAluAluJb
CAediting_972291chr13_102837135_+SINEAluAluJb
CAediting_972292chr13_102837139_+SINEAluAluJb
CAediting_972293chr13_102837157_+SINEAluAluJb
CAediting_972294chr13_102837163_+SINEAluAluJb
CAediting_972295chr13_102837167_+SINEAluAluJb
CAediting_972296chr13_102837194_+SINEAluAluJb
CAediting_972297chr13_102837228_+SINEAluAluJb
CAediting_972298chr13_102837238_+SINEAluAluJb
CAediting_972299chr13_102837253_+SINEAluAluJb
CAediting_972300chr13_102837254_+SINEAluAluJb
CAediting_972301chr13_102837683_+LINEL1L1PB2
CAediting_972302chr13_102837699_+LINEL1L1PB2
CAediting_972303chr13_102840484_+SINEAluAluY
CAediting_972304chr13_102840496_+SINEAluAluY
CAediting_972305chr13_102840497_+SINEAluAluY
CAediting_972306chr13_102840518_+SINEAluAluY
CAediting_972307chr13_102840521_+SINEAluAluY
CAediting_972308chr13_102840522_+SINEAluAluY
CAediting_972309chr13_102840527_+SINEAluAluY
CAediting_972310chr13_102840537_+SINEAluAluY
CAediting_972311chr13_102840547_+SINEAluAluY
CAediting_972312chr13_102840557_+SINEAluAluY
CAediting_972313chr13_102840563_+SINEAluAluY
CAediting_972314chr13_102840573_+SINEAluAluY
CAediting_972315chr13_102840590_+SINEAluAluY
CAediting_972316chr13_102840593_+SINEAluAluY
CAediting_972317chr13_102840596_+SINEAluAluY
CAediting_972318chr13_102840605_+SINEAluAluY
CAediting_972319chr13_102840618_+SINEAluAluY
CAediting_972320chr13_102840666_+SINEAluAluY
CAediting_972321chr13_102840671_+SINEAluAluY

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RNA A-to-I editing events in the alternative splicing sites for BIVM

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_972153chr13_102801434_+102801415:1028014373SS0+1iTTATTTTTTATTTTTTTTTAGTA-5.51TTATTTTTTATTTTTTTTTGGTA3.24
MEX_1CAediting_972153chr13_102801434_+102801415:1028014373SS0+1iTTATTTTTTATTTTTTTTTAGTA-5.51TTATTTTTTATTTTTTTTTGGTA3.24
ESCAediting_972154chr13_102801437_+102801415:1028014373SS3+0iTTATTTTTTATTTTTTTTTAGTA-5.51TTATTTTTTATTTTTTTTTAGTG-5.45
MEX_1CAediting_972154chr13_102801437_+102801415:1028014373SS3+0iTTATTTTTTATTTTTTTTTAGTA-5.51TTATTTTTTATTTTTTTTTAGTG-5.45
ESCAediting_972227chr13_102806350_+102806348:1028063565SS1+0iCAAGTGAGT9.1CAGGTGAGT10.67

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000134897.12.BIVM.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000134897.12.BIVM.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for BIVM

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for BIVM

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for BIVM

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_972303chr13_102840484_+ENSG00000134897.12ENST00000257336hsa-miR-6878-3p1028404801028404867mer-m8102840466102840487145.00-20.11
CAediting_972313chr13_102840563_+ENSG00000134897.12ENST00000257336hsa-miR-140-3p1028405581028405647mer-m8102840545102840565155.00-25.07
CAediting_972304chr13_102840496_+ENSG00000134897.12ENST00000257336hsa-miR-3157-5p1028404901028404967mer-m8102840476102840497159.00-20.57
CAediting_972305chr13_102840497_+ENSG00000134897.12ENST00000257336hsa-miR-31461028404931028404997mer-m8102840480102840500143.00-19.32
CAediting_972306chr13_102840518_+ENSG00000134897.12ENST00000257336hsa-miR-374b-3p1028405151028405228mer-1a102840500102840522147.00-12.57
CAediting_972307chr13_102840521_+ENSG00000134897.12ENST00000257336hsa-miR-222-5p1028405151028405228mer-1a102840501102840522140.00-9.13
CAediting_972307chr13_102840521_+ENSG00000134897.12ENST00000257336hsa-miR-9361028405141028405218mer-1a102840499102840521159.00-22.47
CAediting_972308chr13_102840522_+ENSG00000134897.12ENST00000257336hsa-miR-3251028405151028405228mer-1a102840500102840522141.00-10.26
CAediting_972309chr13_102840527_+ENSG00000134897.12ENST00000257336hsa-miR-3680-3p1028405241028405318mer-1a102840509102840531145.00-17.66
CAediting_972309chr13_102840527_+ENSG00000134897.12ENST00000257336hsa-miR-3680-3p1028405241028405318mer-1a102840509102840531145.00-17.66
CAediting_972309chr13_102840527_+ENSG00000134897.12ENST00000257336hsa-miR-4666b1028405221028405298mer-1a102840507102840529140.00-10.84
CAediting_972314chr13_102840573_+ENSG00000134897.12ENST00000257336hsa-miR-6461028405681028405747mer-m8102840556102840575144.00-19.09
CAediting_972316chr13_102840593_+ENSG00000134897.12ENST00000257336hsa-miR-6752-3p1028405861028405927mer-m8102840574102840593149.00-21.25
CAediting_972316chr13_102840593_+ENSG00000134897.12ENST00000257336hsa-miR-6801-3p1028405871028405948mer-1a102840573102840594149.00-22.29
CAediting_972316chr13_102840593_+ENSG00000134897.12ENST00000257336hsa-miR-6810-3p1028405871028405948mer-1a102840571102840594145.00-23.86
CAediting_972317chr13_102840596_+ENSG00000134897.12ENST00000257336hsa-miR-4639-3p1028405911028405977mer-m8102840576102840598148.00-23.17
CAediting_972317chr13_102840596_+ENSG00000134897.12ENST00000257336hsa-miR-6777-3p1028405921028405987mer-m8102840580102840599164.00-29.74
CAediting_972318chr13_102840605_+ENSG00000134897.12ENST00000257336hsa-miR-42841028406001028406067mer-m8102840590102840607148.00-20.34
CAediting_972318chr13_102840605_+ENSG00000134897.12ENST00000257336hsa-miR-44371028406011028406077mer-m8102840588102840608145.00-18.43
CAediting_972320chr13_102840666_+ENSG00000134897.12ENST00000257336hsa-miR-11811028406591028406657mer-m8102840646102840666142.00-22.01
CAediting_972312chr13_102840557_+ENSG00000134897.12ENST00000257336hsa-miR-6789-3p1028405521028405587mer-m8102840539102840559155.00-22.77
CAediting_972319chr13_102840618_+ENSG00000134897.12ENST00000257336hsa-miR-1224-3p1028406111028406177mer-m8102840598102840618151.00-25.67
CAediting_972319chr13_102840618_+ENSG00000134897.12ENST00000257336hsa-miR-3189-5p1028406141028406196mer102840600102840620144.00-30.84
CAediting_972319chr13_102840618_+ENSG00000134897.12ENST00000257336hsa-miR-43231028406141028406207mer-m8102840604102840621150.00-22.51
CAediting_972319chr13_102840618_+ENSG00000134897.12ENST00000257336hsa-miR-4758-3p1028406131028406197mer-m8102840598102840620158.00-27.29

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_972315chr13_102840590_+ENSG00000134897.12ENST00000257336hsa-miR-19761028405871028405948mer-1a102840573102840594148-20.9
CAediting_972316chr13_102840593_+ENSG00000134897.12ENST00000257336hsa-miR-19761028405871028405948mer-1a102840573102840594148-20.9
CAediting_972309chr13_102840527_+ENSG00000134897.12ENST00000257336hsa-miR-2971028405221028405298mer-1a102840509102840529143-9.08
CAediting_972309chr13_102840527_+ENSG00000134897.12ENST00000257336hsa-miR-31491028405231028405308mer-1a102840509102840530146-10.13
CAediting_972321chr13_102840671_+ENSG00000134897.12ENST00000257336hsa-miR-431-5p1028406681028406747mer-m8102840654102840675143-18.06
CAediting_972305chr13_102840497_+ENSG00000134897.12ENST00000257336hsa-miR-4716-5p1028404951028405017mer-m8102840481102840502140-11.49
CAediting_972310chr13_102840537_+ENSG00000134897.12ENST00000257336hsa-miR-4735-5p1028405311028405377mer-m8102840517102840538140-4.28
CAediting_972313chr13_102840563_+ENSG00000134897.12ENST00000257336hsa-miR-47591028405611028405688mer-1a102840548102840568149-14.31
CAediting_972312chr13_102840557_+ENSG00000134897.12ENST00000257336hsa-miR-552-3p1028405551028405628mer-1a102840540102840562150-16.09
CAediting_972309chr13_102840527_+ENSG00000134897.12ENST00000257336hsa-miR-5671028405211028405288mer-1a102840506102840528145-9.7
CAediting_972315chr13_102840590_+ENSG00000134897.12ENST00000257336hsa-miR-6747-3p1028405851028405928mer-1a102840570102840592153-23.72
CAediting_972319chr13_102840618_+ENSG00000134897.12ENST00000257336hsa-miR-6796-3p1028406161028406216mer102840603102840622144-21.1
CAediting_972306chr13_102840518_+ENSG00000134897.12ENST00000257336hsa-miR-6832-5p1028405121028405187mer-m8102840497102840519142-16.66
CAediting_972303chr13_102840484_+ENSG00000134897.12ENST00000257336hsa-miR-6843-3p1028404801028404867mer-m8102840469102840487151-18.93
CAediting_972303chr13_102840484_+ENSG00000134897.12ENST00000257336hsa-miR-6848-3p1028404801028404867mer-m8102840471102840487142-18.47
CAediting_972320chr13_102840666_+ENSG00000134897.12ENST00000257336hsa-miR-874-3p1028406641028406718mer-1a102840649102840671155-24.75
CAediting_972321chr13_102840671_+ENSG00000134897.12ENST00000257336hsa-miR-874-3p1028406641028406718mer-1a102840649102840671155-24.75

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1399425chr20_1392958_-ENSG00000134897.12ENST00000257336hsa-miR-6869-5p1028410101028410167mer-m8102840996102841017152-19.09
CAediting_396018chr5_1062918_-ENSG00000134897.12ENST00000257336hsa-miR-46351028412791028412857mer-m8102841266102841286145-15.35
CAediting_1524209chrX_134546392_-ENSG00000134897.12ENST00000257336hsa-miR-503-5p1028411491028411557mer-1a102841132102841155140-23.6

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229414chr17_67471546_+ENSG00000134897.12ENST00000257336hsa-miR-548aa1028411361028411427mer-m8102841118102841143151-12.46

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for BIVM

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for BIVM

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for BIVM

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for BIVM

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for BIVM

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for BIVM

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource