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Editing gene: ALKBH4 (CAeditome ID:54784)

Gene summary for ALKBH4

Gene summary

Gene information	Gene symbol	ALKBH4
	Gene ID	54784
	Gene name	alkB homolog 4, lysine demethylase
	Synonyms	ABH4
	Cytomap	7q22.1
	Type of gene	protein-coding
	Description	alpha-ketoglutarate-dependent dioxygenase alkB homolog 4DNA N6-methyl adenine demethylase ALKBH4alkB homolog 4, lysine demthylasealkB, alkylation repair homolog 4alkylated DNA repair protein alkB homolog 4lysine-specific demethylase ALKBH4probable a
	Modification date	20210518
	UniProtAcc	Q9NXW9
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ALKBH4	GO:0003779	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4	23673617
ALKBH4	GO:0016706	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4	21166655
ALKBH4	GO:0006482	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4	23673617
ALKBH4	GO:0030496	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4	23673617
ALKBH4	GO:0070938	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4	23673617

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RNA A-to-I events for ALKBH4

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000160993.3

RNA A-to-I editing events in Cancer.

CAediting_587831(102456859, -), CAediting_587832(102456866, -), CAediting_587833(102456896, -), CAediting_587834(102456905, -), CAediting_587835(102456925, -), CAediting_587836(102456926, -), CAediting_587837(102456944, -), CAediting_587838(102456961, -), CAediting_587839(102456967, -), CAediting_587840(102456996, -), CAediting_587841(102456997, -), CAediting_587842(102456998, -), CAediting_587843(102456999, -), CAediting_587844(102457002, -), CAediting_587845(102457006, -), CAediting_587846(102457007, -), CAediting_587847(102457008, -), CAediting_587848(102457009, -), CAediting_587849(102457032, -), CAediting_587850(102457033, -), CAediting_587851(102457045, -), CAediting_587852(102457056, -), CAediting_587853(102457066, -), CAediting_587854(102457079, -), CAediting_587855(102457093, -), CAediting_587856(102457095, -), CAediting_587857(102457096, -), CAediting_587858(102457101, -), CAediting_587859(102457102, -), CAediting_587860(102457118, -), CAediting_587861(102458231, -), CAediting_587862(102460241, -), CAediting_587863(102462187, -), CAediting_587864(102462405, -), CAediting_587865(102462563, -), CAediting_587866(102462564, -), CAediting_587867(102462614, -), CAediting_587868(102462643, -), CAediting_587869(102463005, -), CAediting_587870(102463042, -), CAediting_587871(102463586, -), CAediting_587872(102463923, -), CAediting_587873(102463952, -), CAediting_587874(102463961, -), CAediting_587875(102463981, -), CAediting_587876(102463982, -), CAediting_587877(102464002, -), CAediting_587878(102464007, -), CAediting_587879(102464010, -),

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RNA editing positional annotations for ALKBH4 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_587831	chr7_102456859_-	UTR3
CAediting_587832	chr7_102456866_-	UTR3
CAediting_587833	chr7_102456896_-	UTR3
CAediting_587834	chr7_102456905_-	UTR3
CAediting_587835	chr7_102456925_-	UTR3
CAediting_587836	chr7_102456926_-	UTR3
CAediting_587837	chr7_102456944_-	UTR3
CAediting_587838	chr7_102456961_-	UTR3
CAediting_587839	chr7_102456967_-	UTR3
CAediting_587840	chr7_102456996_-	UTR3
CAediting_587841	chr7_102456997_-	UTR3
CAediting_587842	chr7_102456998_-	UTR3
CAediting_587843	chr7_102456999_-	UTR3
CAediting_587844	chr7_102457002_-	UTR3
CAediting_587845	chr7_102457006_-	UTR3
CAediting_587846	chr7_102457007_-	UTR3
CAediting_587847	chr7_102457008_-	UTR3
CAediting_587848	chr7_102457009_-	UTR3
CAediting_587849	chr7_102457032_-	UTR3
CAediting_587850	chr7_102457033_-	UTR3
CAediting_587851	chr7_102457045_-	UTR3
CAediting_587852	chr7_102457056_-	UTR3
CAediting_587853	chr7_102457066_-	UTR3
CAediting_587854	chr7_102457079_-	UTR3
CAediting_587855	chr7_102457093_-	UTR3
CAediting_587856	chr7_102457095_-	UTR3
CAediting_587857	chr7_102457096_-	UTR3
CAediting_587858	chr7_102457101_-	UTR3
CAediting_587859	chr7_102457102_-	UTR3
CAediting_587860	chr7_102457118_-	UTR3
CAediting_587861	chr7_102458231_-	intronic
CAediting_587862	chr7_102460241_-	ncRNA_intronic
CAediting_587863	chr7_102462187_-	ncRNA_intronic
CAediting_587864	chr7_102462405_-	ncRNA_intronic
CAediting_587865	chr7_102462563_-	ncRNA_intronic
CAediting_587866	chr7_102462564_-	ncRNA_intronic
CAediting_587867	chr7_102462614_-	ncRNA_intronic
CAediting_587868	chr7_102462643_-	ncRNA_intronic
CAediting_587869	chr7_102463005_-	ncRNA_intronic
CAediting_587870	chr7_102463042_-	ncRNA_intronic
CAediting_587871	chr7_102463586_-	ncRNA_intronic
CAediting_587872	chr7_102463923_-	ncRNA_intronic
CAediting_587873	chr7_102463952_-	ncRNA_intronic
CAediting_587874	chr7_102463961_-	ncRNA_intronic
CAediting_587875	chr7_102463981_-	ncRNA_intronic
CAediting_587876	chr7_102463982_-	ncRNA_intronic
CAediting_587877	chr7_102464002_-	ncRNA_intronic
CAediting_587878	chr7_102464007_-	ncRNA_intronic
CAediting_587879	chr7_102464010_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_587831	chr7_102456859_-	SINE	Alu	AluSz
CAediting_587832	chr7_102456866_-	SINE	Alu	AluSz
CAediting_587833	chr7_102456896_-	SINE	Alu	AluSz
CAediting_587834	chr7_102456905_-	SINE	Alu	AluSz
CAediting_587835	chr7_102456925_-	SINE	Alu	AluSz
CAediting_587836	chr7_102456926_-	SINE	Alu	AluSz
CAediting_587837	chr7_102456944_-	SINE	Alu	AluSz
CAediting_587838	chr7_102456961_-	SINE	Alu	AluSz
CAediting_587839	chr7_102456967_-	SINE	Alu	AluSz
CAediting_587840	chr7_102456996_-	SINE	Alu	AluSz
CAediting_587841	chr7_102456997_-	SINE	Alu	AluSz
CAediting_587842	chr7_102456998_-	SINE	Alu	AluSz
CAediting_587843	chr7_102456999_-	SINE	Alu	AluSz
CAediting_587844	chr7_102457002_-	SINE	Alu	AluSz
CAediting_587845	chr7_102457006_-	SINE	Alu	AluSz
CAediting_587846	chr7_102457007_-	SINE	Alu	AluSz
CAediting_587847	chr7_102457008_-	SINE	Alu	AluSz
CAediting_587848	chr7_102457009_-	SINE	Alu	AluSz
CAediting_587849	chr7_102457032_-	SINE	Alu	AluSz
CAediting_587850	chr7_102457033_-	SINE	Alu	AluSz
CAediting_587851	chr7_102457045_-	SINE	Alu	AluSz
CAediting_587852	chr7_102457056_-	SINE	Alu	AluSz
CAediting_587853	chr7_102457066_-	SINE	Alu	AluSz
CAediting_587854	chr7_102457079_-	SINE	Alu	AluSz
CAediting_587855	chr7_102457093_-	SINE	Alu	AluSz
CAediting_587856	chr7_102457095_-	SINE	Alu	AluSz
CAediting_587857	chr7_102457096_-	SINE	Alu	AluSz
CAediting_587858	chr7_102457101_-	SINE	Alu	AluSz
CAediting_587859	chr7_102457102_-	SINE	Alu	AluSz
CAediting_587860	chr7_102457118_-	SINE	Alu	AluSz
CAediting_587861	chr7_102458231_-	SINE	Alu	AluJb
CAediting_587862	chr7_102460241_-	SINE	Alu	AluJr
CAediting_587864	chr7_102462405_-	SINE	Alu	AluJr
CAediting_587865	chr7_102462563_-	SINE	Alu	AluJr
CAediting_587866	chr7_102462564_-	SINE	Alu	AluJr
CAediting_587867	chr7_102462614_-	SINE	Alu	AluJr
CAediting_587868	chr7_102462643_-	SINE	Alu	AluJr
CAediting_587869	chr7_102463005_-	SINE	Alu	AluJb
CAediting_587870	chr7_102463042_-	SINE	Alu	AluJb
CAediting_587871	chr7_102463586_-	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for ALKBH4

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000160993.3.ALKBH4.

Correlation between RNA A-to-I editing and PSI for ENSG00000160993.3.ALKBH4.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ALKBH4

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ALKBH4

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ALKBH4

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_587835	chr7_102456925_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3155a	102456921	102456927	7mer-m8	102456920	102456941	149.00	-23.08
CAediting_587835	chr7_102456925_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3155b	102456921	102456927	7mer-m8	102456920	102456938	149.00	-22.89
CAediting_587835	chr7_102456925_-	ENSG00000160993.3	ENST00000292566	hsa-miR-484	102456921	102456927	7mer-m8	102456920	102456943	155.00	-28.52
CAediting_587835	chr7_102456925_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3155a	102456921	102456927	7mer-m8	102456920	102456941	149.00	-23.08
CAediting_587835	chr7_102456925_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3155b	102456921	102456927	7mer-m8	102456920	102456938	149.00	-22.89
CAediting_587835	chr7_102456925_-	ENSG00000160993.3	ENST00000490528	hsa-miR-484	102456921	102456927	7mer-m8	102456920	102456943	155.00	-28.52
CAediting_587845	chr7_102457006_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6844	102457005	102457011	7mer-m8	102457004	102457024	140.00	-5.84
CAediting_587845	chr7_102457006_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6844	102457005	102457011	7mer-m8	102457004	102457024	140.00	-5.84
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3176	102457041	102457047	7mer-m8	102457040	102457058	160.00	-27.08
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3922-3p	102457041	102457047	7mer-m8	102457040	102457061	154.00	-24.26
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6878-3p	102457042	102457048	7mer-m8	102457041	102457061	148.00	-24.54
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3176	102457041	102457047	7mer-m8	102457040	102457058	160.00	-27.08
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3922-3p	102457041	102457047	7mer-m8	102457040	102457061	154.00	-24.26
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6878-3p	102457042	102457048	7mer-m8	102457041	102457061	148.00	-24.54
CAediting_587832	chr7_102456866_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4715-3p	102456864	102456870	7mer-m8	102456863	102456885	150.00	-18.08
CAediting_587832	chr7_102456866_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4727-5p	102456862	102456868	7mer-m8	102456861	102456881	142.00	-14.07
CAediting_587832	chr7_102456866_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6817-5p	102456862	102456868	7mer-1a	102456862	102456883	151.00	-30.86
CAediting_587832	chr7_102456866_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4715-3p	102456864	102456870	7mer-m8	102456863	102456885	150.00	-18.08
CAediting_587832	chr7_102456866_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4727-5p	102456862	102456868	7mer-m8	102456861	102456881	142.00	-14.07
CAediting_587832	chr7_102456866_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6817-5p	102456862	102456868	7mer-1a	102456862	102456883	151.00	-30.86
CAediting_587833	chr7_102456896_-	ENSG00000160993.3	ENST00000292566	hsa-miR-149-5p	102456896	102456902	7mer-m8	102456895	102456917	148.00	-24.00
CAediting_587833	chr7_102456896_-	ENSG00000160993.3	ENST00000490528	hsa-miR-149-5p	102456896	102456902	7mer-m8	102456895	102456917	148.00	-24.00
CAediting_587836	chr7_102456926_-	ENSG00000160993.3	ENST00000292566	hsa-miR-9900	102456921	102456927	7mer-m8	102456920	102456939	151.00	-16.75
CAediting_587836	chr7_102456926_-	ENSG00000160993.3	ENST00000490528	hsa-miR-9900	102456921	102456927	7mer-m8	102456920	102456939	151.00	-16.75
CAediting_587837	chr7_102456944_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3620-3p	102456940	102456945	6mer	102456939	102456961	142.00	-26.18
CAediting_587837	chr7_102456944_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3620-3p	102456940	102456945	6mer	102456939	102456961	142.00	-26.18
CAediting_587839	chr7_102456967_-	ENSG00000160993.3	ENST00000292566	hsa-miR-638	102456961	102456967	7mer-1a	102456961	102456987	150.00	-28.48
CAediting_587839	chr7_102456967_-	ENSG00000160993.3	ENST00000490528	hsa-miR-638	102456961	102456967	7mer-1a	102456961	102456987	150.00	-28.48
CAediting_587841	chr7_102456997_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6844	102456996	102457002	7mer-m8	102456995	102457017	147.00	-6.53
CAediting_587841	chr7_102456997_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6844	102456996	102457002	7mer-m8	102456995	102457017	147.00	-6.53
CAediting_587842	chr7_102456998_-	ENSG00000160993.3	ENST00000292566	hsa-miR-578	102456996	102457002	7mer-m8	102456995	102457015	145.00	-7.62
CAediting_587842	chr7_102456998_-	ENSG00000160993.3	ENST00000490528	hsa-miR-578	102456996	102457002	7mer-m8	102456995	102457015	145.00	-7.62
CAediting_587843	chr7_102456999_-	ENSG00000160993.3	ENST00000292566	hsa-miR-20b-3p	102456998	102457005	8mer-1a	102456998	102457019	143.00	-12.95
CAediting_587843	chr7_102456999_-	ENSG00000160993.3	ENST00000490528	hsa-miR-20b-3p	102456998	102457005	8mer-1a	102456998	102457019	143.00	-12.95
CAediting_587844	chr7_102457002_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4328	102457002	102457008	7mer-m8	102457001	102457017	142.00	-7.52
CAediting_587844	chr7_102457002_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6516-5p	102456998	102457005	8mer-1a	102456998	102457019	140.00	-15.58
CAediting_587844	chr7_102457002_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4328	102457002	102457008	7mer-m8	102457001	102457017	142.00	-7.52
CAediting_587844	chr7_102457002_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6516-5p	102456998	102457005	8mer-1a	102456998	102457019	140.00	-15.58
CAediting_587846	chr7_102457007_-	ENSG00000160993.3	ENST00000292566	hsa-miR-5584-3p	102457002	102457009	8mer-1a	102457002	102457023	140.00	-8.26
CAediting_587846	chr7_102457007_-	ENSG00000160993.3	ENST00000292566	hsa-miR-578	102457005	102457011	7mer-m8	102457004	102457024	143.00	-9.97
CAediting_587846	chr7_102457007_-	ENSG00000160993.3	ENST00000490528	hsa-miR-5584-3p	102457002	102457009	8mer-1a	102457002	102457023	140.00	-8.26
CAediting_587846	chr7_102457007_-	ENSG00000160993.3	ENST00000490528	hsa-miR-578	102457005	102457011	7mer-m8	102457004	102457024	143.00	-9.97
CAediting_587849	chr7_102457032_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3190-5p	102457032	102457038	7mer-m8	102457031	102457050	154.00	-19.64
CAediting_587849	chr7_102457032_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3190-5p	102457032	102457038	7mer-m8	102457031	102457050	154.00	-19.64
CAediting_587854	chr7_102457079_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6849-3p	102457079	102457085	7mer-m8	102457078	102457099	140.00	-16.61
CAediting_587854	chr7_102457079_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6849-3p	102457079	102457085	7mer-m8	102457078	102457099	140.00	-16.61
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-302a-3p	102457090	102457096	7mer-m8	102457089	102457110	147.00	-16.15
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-302b-3p	102457090	102457096	7mer-m8	102457089	102457116	144.00	-10.28
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-302c-3p	102457090	102457096	7mer-m8	102457089	102457109	145.00	-12.62
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-302d-3p	102457090	102457096	7mer-m8	102457089	102457116	152.00	-15.23
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-302e	102457090	102457096	7mer-m8	102457089	102457105	141.00	-8.91
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-372-3p	102457090	102457096	7mer-m8	102457089	102457116	155.00	-18.95
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-373-3p	102457090	102457096	7mer-m8	102457089	102457112	164.00	-23.06
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-520a-3p	102457090	102457096	7mer-m8	102457089	102457110	140.00	-11.74
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-520b-3p	102457090	102457096	7mer-m8	102457089	102457108	141.00	-17.23
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-520c-3p	102457090	102457096	7mer-m8	102457089	102457109	146.00	-17.23
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-520d-3p	102457090	102457096	7mer-m8	102457089	102457112	142.00	-16.29
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-520e-3p	102457090	102457096	7mer-m8	102457089	102457109	140.00	-14.03
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-302a-3p	102457090	102457096	7mer-m8	102457089	102457110	147.00	-16.15
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-302b-3p	102457090	102457096	7mer-m8	102457089	102457116	144.00	-10.28
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-302c-3p	102457090	102457096	7mer-m8	102457089	102457109	145.00	-12.62
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-302d-3p	102457090	102457096	7mer-m8	102457089	102457116	152.00	-15.23
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-302e	102457090	102457096	7mer-m8	102457089	102457105	141.00	-8.91
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-372-3p	102457090	102457096	7mer-m8	102457089	102457116	155.00	-18.95
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-373-3p	102457090	102457096	7mer-m8	102457089	102457112	164.00	-23.06
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-520a-3p	102457090	102457096	7mer-m8	102457089	102457110	140.00	-11.74
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-520b-3p	102457090	102457096	7mer-m8	102457089	102457108	141.00	-17.23
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-520c-3p	102457090	102457096	7mer-m8	102457089	102457109	146.00	-17.23
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-520d-3p	102457090	102457096	7mer-m8	102457089	102457112	142.00	-16.29
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-520e-3p	102457090	102457096	7mer-m8	102457089	102457109	140.00	-14.03
CAediting_587858	chr7_102457101_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3117-3p	102457095	102457102	8mer-1a	102457095	102457115	146.00	-13.86
CAediting_587858	chr7_102457101_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4759	102457096	102457103	8mer-1a	102457096	102457116	153.00	-16.08
CAediting_587858	chr7_102457101_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3117-3p	102457095	102457102	8mer-1a	102457095	102457115	146.00	-13.86
CAediting_587858	chr7_102457101_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4759	102457096	102457103	8mer-1a	102457096	102457116	153.00	-16.08
CAediting_587859	chr7_102457102_-	ENSG00000160993.3	ENST00000292566	hsa-miR-513a-5p	102457101	102457107	7mer-m8	102457100	102457117	144.00	-17.77
CAediting_587859	chr7_102457102_-	ENSG00000160993.3	ENST00000292566	hsa-miR-513a-5p	102457101	102457107	7mer-m8	102457100	102457117	144.00	-17.77
CAediting_587859	chr7_102457102_-	ENSG00000160993.3	ENST00000490528	hsa-miR-513a-5p	102457101	102457107	7mer-m8	102457100	102457117	144.00	-17.77
CAediting_587859	chr7_102457102_-	ENSG00000160993.3	ENST00000490528	hsa-miR-513a-5p	102457101	102457107	7mer-m8	102457100	102457117	144.00	-17.77
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6511a-3p	102456900	102456905	6mer	102456899	102456920	140.00	-25.44
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6511a-3p	102456900	102456905	6mer	102456899	102456920	140.00	-25.44
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6511a-3p	102456900	102456905	6mer	102456899	102456920	140.00	-25.44
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6511a-3p	102456900	102456905	6mer	102456899	102456920	140.00	-25.44
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6511b-3p	102456900	102456905	6mer	102456899	102456921	144.00	-28.32
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6511b-3p	102456900	102456905	6mer	102456899	102456921	144.00	-28.32
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6784-3p	102456900	102456905	6mer	102456899	102456921	147.00	-30.55
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6511a-3p	102456900	102456905	6mer	102456899	102456920	140.00	-25.44
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6511a-3p	102456900	102456905	6mer	102456899	102456920	140.00	-25.44
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6511a-3p	102456900	102456905	6mer	102456899	102456920	140.00	-25.44
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6511a-3p	102456900	102456905	6mer	102456899	102456920	140.00	-25.44
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6511b-3p	102456900	102456905	6mer	102456899	102456921	144.00	-28.32
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6511b-3p	102456900	102456905	6mer	102456899	102456921	144.00	-28.32
CAediting_587834	chr7_102456905_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6784-3p	102456900	102456905	6mer	102456899	102456921	147.00	-30.55

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_587858	chr7_102457101_-	ENSG00000160993.3	ENST00000292566	hsa-miR-10399-5p	102457100	102457106	7mer-m8	102457099	102457120	148	-10
CAediting_587859	chr7_102457102_-	ENSG00000160993.3	ENST00000292566	hsa-miR-10399-5p	102457100	102457106	7mer-m8	102457099	102457120	148	-10
CAediting_587853	chr7_102457066_-	ENSG00000160993.3	ENST00000292566	hsa-miR-1245a	102457064	102457070	7mer-m8	102457063	102457079	146	-20.1
CAediting_587855	chr7_102457093_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3152-3p	102457092	102457098	7mer-m8	102457091	102457113	151	-14.36
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3152-3p	102457092	102457098	7mer-m8	102457091	102457113	151	-14.36
CAediting_587857	chr7_102457096_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3152-3p	102457092	102457098	7mer-m8	102457091	102457113	151	-14.36
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3663-5p	102457041	102457047	7mer-m8	102457040	102457059	148	-23.23
CAediting_587847	chr7_102457008_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3674	102457007	102457014	8mer-1a	102457007	102457029	141	-10.5
CAediting_587848	chr7_102457009_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3674	102457007	102457014	8mer-1a	102457007	102457029	141	-10.5
CAediting_587860	chr7_102457118_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4252	102457113	102457119	7mer-m8	102457112	102457130	150	-23.19
CAediting_587831	chr7_102456859_-	ENSG00000160993.3	ENST00000292566	hsa-miR-431-5p	102456855	102456861	7mer-m8	102456854	102456872	147	-15.62
CAediting_587850	chr7_102457033_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4435	102457032	102457039	8mer-1a	102457032	102457052	146	-18.85
CAediting_587850	chr7_102457033_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4435	102457032	102457039	8mer-1a	102457032	102457052	146	-18.85
CAediting_587852	chr7_102457056_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4642	102457056	102457062	7mer-m8	102457055	102457076	141	-18.07
CAediting_587852	chr7_102457056_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4720-5p	102457055	102457061	7mer-m8	102457054	102457076	146	-18.99
CAediting_587840	chr7_102456996_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4735-5p	102456992	102456998	7mer-m8	102456991	102457012	140	-4.7
CAediting_587841	chr7_102456997_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4735-5p	102456992	102456998	7mer-m8	102456991	102457012	140	-4.7
CAediting_587852	chr7_102457056_-	ENSG00000160993.3	ENST00000292566	hsa-miR-4799-3p	102457055	102457061	7mer-m8	102457054	102457075	140	-14.63
CAediting_587835	chr7_102456925_-	ENSG00000160993.3	ENST00000292566	hsa-miR-498-5p	102456925	102456931	7mer-m8	102456924	102456946	142	-10.41
CAediting_587836	chr7_102456926_-	ENSG00000160993.3	ENST00000292566	hsa-miR-498-5p	102456925	102456931	7mer-m8	102456924	102456946	142	-10.41
CAediting_587838	chr7_102456961_-	ENSG00000160993.3	ENST00000292566	hsa-miR-5089-5p	102456961	102456967	7mer-m8	102456960	102456985	145	-17.2
CAediting_587855	chr7_102457093_-	ENSG00000160993.3	ENST00000292566	hsa-miR-520g-3p	102457088	102457094	7mer-m8	102457087	102457109	151	-12.59
CAediting_587855	chr7_102457093_-	ENSG00000160993.3	ENST00000292566	hsa-miR-520h	102457088	102457094	7mer-m8	102457087	102457107	146	-10.35
CAediting_587852	chr7_102457056_-	ENSG00000160993.3	ENST00000292566	hsa-miR-5588-5p	102457055	102457061	7mer-m8	102457054	102457075	153	-19.55
CAediting_587831	chr7_102456859_-	ENSG00000160993.3	ENST00000292566	hsa-miR-5691	102456858	102456865	8mer-1a	102456858	102456878	155	-23.98
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6131	102457040	102457046	7mer-m8	102457039	102457057	140	-18.33
CAediting_587858	chr7_102457101_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6504-3p	102457100	102457106	7mer-m8	102457099	102457120	149	-15.11
CAediting_587859	chr7_102457102_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6504-3p	102457100	102457106	7mer-m8	102457099	102457120	149	-15.11
CAediting_587838	chr7_102456961_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6506-5p	102456960	102456966	7mer-m8	102456959	102456982	142	-16.23
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000292566	hsa-miR-651-5p	102457095	102457101	7mer-m8	102457094	102457118	145	-8.99
CAediting_587857	chr7_102457096_-	ENSG00000160993.3	ENST00000292566	hsa-miR-651-5p	102457095	102457101	7mer-m8	102457094	102457118	145	-8.99
CAediting_587860	chr7_102457118_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6529-3p	102457117	102457123	7mer-m8	102457116	102457137	141	-15.86
CAediting_587860	chr7_102457118_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6737-3p	102457117	102457122	6mer	102457116	102457137	145	-22.76
CAediting_587832	chr7_102456866_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6773-3p	102456862	102456869	8mer-1a	102456862	102456883	141	-14.41
CAediting_587831	chr7_102456859_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6805-3p	102456858	102456865	8mer-1a	102456858	102456879	148	-18.8
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6843-3p	102457042	102457048	7mer-m8	102457041	102457060	152	-19.1
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6848-3p	102457042	102457048	7mer-m8	102457041	102457058	142	-14.3
CAediting_587860	chr7_102457118_-	ENSG00000160993.3	ENST00000292566	hsa-miR-6889-3p	102457117	102457123	7mer-m8	102457116	102457135	148	-28.82
CAediting_587853	chr7_102457066_-	ENSG00000160993.3	ENST00000292566	hsa-miR-8079	102457064	102457070	7mer-m8	102457063	102457082	149	-13.87
CAediting_587858	chr7_102457101_-	ENSG00000160993.3	ENST00000490528	hsa-miR-10399-5p	102457100	102457106	7mer-m8	102457099	102457120	148	-10
CAediting_587859	chr7_102457102_-	ENSG00000160993.3	ENST00000490528	hsa-miR-10399-5p	102457100	102457106	7mer-m8	102457099	102457120	148	-10
CAediting_587853	chr7_102457066_-	ENSG00000160993.3	ENST00000490528	hsa-miR-1245a	102457064	102457070	7mer-m8	102457063	102457079	146	-20.1
CAediting_587855	chr7_102457093_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3152-3p	102457092	102457098	7mer-m8	102457091	102457113	151	-14.36
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3152-3p	102457092	102457098	7mer-m8	102457091	102457113	151	-14.36
CAediting_587857	chr7_102457096_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3152-3p	102457092	102457098	7mer-m8	102457091	102457113	151	-14.36
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3663-5p	102457041	102457047	7mer-m8	102457040	102457059	148	-23.23
CAediting_587847	chr7_102457008_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3674	102457007	102457014	8mer-1a	102457007	102457029	141	-10.5
CAediting_587848	chr7_102457009_-	ENSG00000160993.3	ENST00000490528	hsa-miR-3674	102457007	102457014	8mer-1a	102457007	102457029	141	-10.5
CAediting_587860	chr7_102457118_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4252	102457113	102457119	7mer-m8	102457112	102457130	150	-23.19
CAediting_587831	chr7_102456859_-	ENSG00000160993.3	ENST00000490528	hsa-miR-431-5p	102456855	102456861	7mer-m8	102456854	102456872	147	-15.62
CAediting_587850	chr7_102457033_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4435	102457032	102457039	8mer-1a	102457032	102457052	146	-18.85
CAediting_587850	chr7_102457033_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4435	102457032	102457039	8mer-1a	102457032	102457052	146	-18.85
CAediting_587852	chr7_102457056_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4642	102457056	102457062	7mer-m8	102457055	102457076	141	-18.07
CAediting_587852	chr7_102457056_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4720-5p	102457055	102457061	7mer-m8	102457054	102457076	146	-18.99
CAediting_587840	chr7_102456996_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4735-5p	102456992	102456998	7mer-m8	102456991	102457012	140	-4.7
CAediting_587841	chr7_102456997_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4735-5p	102456992	102456998	7mer-m8	102456991	102457012	140	-4.7
CAediting_587852	chr7_102457056_-	ENSG00000160993.3	ENST00000490528	hsa-miR-4799-3p	102457055	102457061	7mer-m8	102457054	102457075	140	-14.63
CAediting_587835	chr7_102456925_-	ENSG00000160993.3	ENST00000490528	hsa-miR-498-5p	102456925	102456931	7mer-m8	102456924	102456946	142	-10.41
CAediting_587836	chr7_102456926_-	ENSG00000160993.3	ENST00000490528	hsa-miR-498-5p	102456925	102456931	7mer-m8	102456924	102456946	142	-10.41
CAediting_587838	chr7_102456961_-	ENSG00000160993.3	ENST00000490528	hsa-miR-5089-5p	102456961	102456967	7mer-m8	102456960	102456985	145	-17.2
CAediting_587855	chr7_102457093_-	ENSG00000160993.3	ENST00000490528	hsa-miR-520g-3p	102457088	102457094	7mer-m8	102457087	102457109	151	-12.59
CAediting_587855	chr7_102457093_-	ENSG00000160993.3	ENST00000490528	hsa-miR-520h	102457088	102457094	7mer-m8	102457087	102457107	146	-10.35
CAediting_587852	chr7_102457056_-	ENSG00000160993.3	ENST00000490528	hsa-miR-5588-5p	102457055	102457061	7mer-m8	102457054	102457075	153	-19.55
CAediting_587831	chr7_102456859_-	ENSG00000160993.3	ENST00000490528	hsa-miR-5691	102456858	102456865	8mer-1a	102456858	102456878	155	-23.98
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6131	102457040	102457046	7mer-m8	102457039	102457057	140	-18.33
CAediting_587858	chr7_102457101_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6504-3p	102457100	102457106	7mer-m8	102457099	102457120	149	-15.11
CAediting_587859	chr7_102457102_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6504-3p	102457100	102457106	7mer-m8	102457099	102457120	149	-15.11
CAediting_587838	chr7_102456961_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6506-5p	102456960	102456966	7mer-m8	102456959	102456982	142	-16.23
CAediting_587856	chr7_102457095_-	ENSG00000160993.3	ENST00000490528	hsa-miR-651-5p	102457095	102457101	7mer-m8	102457094	102457118	145	-8.99
CAediting_587857	chr7_102457096_-	ENSG00000160993.3	ENST00000490528	hsa-miR-651-5p	102457095	102457101	7mer-m8	102457094	102457118	145	-8.99
CAediting_587860	chr7_102457118_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6529-3p	102457117	102457123	7mer-m8	102457116	102457137	141	-15.86
CAediting_587860	chr7_102457118_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6737-3p	102457117	102457122	6mer	102457116	102457137	145	-22.76
CAediting_587832	chr7_102456866_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6773-3p	102456862	102456869	8mer-1a	102456862	102456883	141	-14.41
CAediting_587831	chr7_102456859_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6805-3p	102456858	102456865	8mer-1a	102456858	102456879	148	-18.8
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6843-3p	102457042	102457048	7mer-m8	102457041	102457060	152	-19.1
CAediting_587851	chr7_102457045_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6848-3p	102457042	102457048	7mer-m8	102457041	102457058	142	-14.3
CAediting_587860	chr7_102457118_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6889-3p	102457117	102457123	7mer-m8	102457116	102457135	148	-28.82
CAediting_587853	chr7_102457066_-	ENSG00000160993.3	ENST00000490528	hsa-miR-8079	102457064	102457070	7mer-m8	102457063	102457082	149	-13.87

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000160993.3	ENST00000292566	hsa-miR-624-3p	102456269	102456275	7mer-m8	102456268	102456288	156	-14.33
CAediting_688081	chr9_63819627_+	ENSG00000160993.3	ENST00000292566	hsa-miR-4477b	102456262	102456269	8mer-1a	102456262	102456283	150	-16.39
CAediting_1229415	chr17_67471547_+	ENSG00000160993.3	ENST00000292566	hsa-miR-548aa	102456342	102456349	8mer-1a	102456342	102456365	144	-17.04
CAediting_580943	chr7_100356700_+	ENSG00000160993.3	ENST00000292566	hsa-miR-6840-3p	102457357	102457364	8mer-1a	102457357	102457376	147	-21.73
CAediting_1306323	chr19_13836462_-	ENSG00000160993.3	ENST00000490528	hsa-miR-27a-3p	102459641	102459647	7mer-m8	102459640	102459660	147	-19.48
CAediting_580943	chr7_100356700_+	ENSG00000160993.3	ENST00000490528	hsa-miR-6840-3p	102457357	102457364	8mer-1a	102457357	102457376	147	-21.73

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_604450	chr7_133034877_-	ENSG00000160993.3	ENST00000292566	hsa-miR-3654	102456758	102456764	7mer-m8	102456757	102456773	153	-23.5
CAediting_86358	chr1_109598906_+	ENSG00000160993.3	ENST00000490528	hsa-miR-197-5p	102457875	102457881	7mer-m8	102457874	102457896	145	-20.75
CAediting_468389	chr6_31355314_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6891-5p	102457413	102457418	6mer	102457412	102457429	141	-20.65
CAediting_468389	chr6_31355314_-	ENSG00000160993.3	ENST00000490528	hsa-miR-6891-5p	102457383	102457389	7mer-m8	102457382	102457400	151	-19.16

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ALKBH4

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000292566.3	protein_coding
ENST00000490528.1	nonsense_mediated_decay

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_587831	ENST00000292566.3	chr7_102456859_-	-861.90	-862.60	-893.70
CAediting_587832	ENST00000292566.3	chr7_102456866_-	-862.10	-862.60	-893.70
CAediting_587833	ENST00000292566.3	chr7_102456896_-	-862.60	-862.60	-893.70
CAediting_587834	ENST00000292566.3	chr7_102456905_-	-861.90	-862.60	-893.70
CAediting_587835	ENST00000292566.3	chr7_102456925_-	-865.10	-862.60	-893.70
CAediting_587836	ENST00000292566.3	chr7_102456926_-	-863.20	-862.60	-893.70
CAediting_587837	ENST00000292566.3	chr7_102456944_-	-863.60	-862.60	-893.70
CAediting_587838	ENST00000292566.3	chr7_102456961_-	-865.70	-862.60	-893.70
CAediting_587839	ENST00000292566.3	chr7_102456967_-	-863.00	-862.60	-893.70
CAediting_587840	ENST00000292566.3	chr7_102456996_-	-863.10	-862.60	-893.70
CAediting_587841	ENST00000292566.3	chr7_102456997_-	-866.30	-862.60	-893.70
CAediting_587842	ENST00000292566.3	chr7_102456998_-	-862.50	-862.60	-893.70
CAediting_587843	ENST00000292566.3	chr7_102456999_-	-864.00	-862.60	-893.70
CAediting_587844	ENST00000292566.3	chr7_102457002_-	-864.60	-862.60	-893.70
CAediting_587845	ENST00000292566.3	chr7_102457006_-	-865.70	-862.60	-893.70
CAediting_587846	ENST00000292566.3	chr7_102457007_-	-864.80	-862.60	-893.70
CAediting_587847	ENST00000292566.3	chr7_102457008_-	-863.30	-862.60	-893.70
CAediting_587848	ENST00000292566.3	chr7_102457009_-	-863.40	-862.60	-893.70
CAediting_587849	ENST00000292566.3	chr7_102457032_-	-862.90	-862.60	-893.70
CAediting_587850	ENST00000292566.3	chr7_102457033_-	-865.00	-862.60	-893.70
CAediting_587851	ENST00000292566.3	chr7_102457045_-	-864.80	-862.60	-893.70
CAediting_587852	ENST00000292566.3	chr7_102457056_-	-861.90	-862.60	-893.70
CAediting_587853	ENST00000292566.3	chr7_102457066_-	-862.20	-862.60	-893.70
CAediting_587854	ENST00000292566.3	chr7_102457079_-	-866.40	-862.60	-893.70
CAediting_587855	ENST00000292566.3	chr7_102457093_-	-864.60	-862.60	-893.70
CAediting_587856	ENST00000292566.3	chr7_102457095_-	-864.10	-862.60	-893.70
CAediting_587857	ENST00000292566.3	chr7_102457096_-	-862.90	-862.60	-893.70
CAediting_587858	ENST00000292566.3	chr7_102457101_-	-862.60	-862.60	-893.70
CAediting_587859	ENST00000292566.3	chr7_102457102_-	-865.60	-862.60	-893.70
CAediting_587860	ENST00000292566.3	chr7_102457118_-	-865.10	-862.60	-893.70
CAediting_587831	ENST00000490528.1	chr7_102456859_-	-606.70	-606.20	-638.10
CAediting_587832	ENST00000490528.1	chr7_102456866_-	-608.20	-606.20	-638.10
CAediting_587833	ENST00000490528.1	chr7_102456896_-	-606.20	-606.20	-638.10
CAediting_587834	ENST00000490528.1	chr7_102456905_-	-605.50	-606.20	-638.10
CAediting_587835	ENST00000490528.1	chr7_102456925_-	-607.50	-606.20	-638.10
CAediting_587836	ENST00000490528.1	chr7_102456926_-	-607.10	-606.20	-638.10
CAediting_587837	ENST00000490528.1	chr7_102456944_-	-608.30	-606.20	-638.10
CAediting_587838	ENST00000490528.1	chr7_102456961_-	-609.80	-606.20	-638.10
CAediting_587839	ENST00000490528.1	chr7_102456967_-	-604.90	-606.20	-638.10
CAediting_587840	ENST00000490528.1	chr7_102456996_-	-607.30	-606.20	-638.10
CAediting_587841	ENST00000490528.1	chr7_102456997_-	-610.50	-606.20	-638.10
CAediting_587842	ENST00000490528.1	chr7_102456998_-	-606.70	-606.20	-638.10
CAediting_587843	ENST00000490528.1	chr7_102456999_-	-608.20	-606.20	-638.10
CAediting_587844	ENST00000490528.1	chr7_102457002_-	-608.70	-606.20	-638.10
CAediting_587845	ENST00000490528.1	chr7_102457006_-	-608.70	-606.20	-638.10
CAediting_587846	ENST00000490528.1	chr7_102457007_-	-606.60	-606.20	-638.10
CAediting_587847	ENST00000490528.1	chr7_102457008_-	-606.30	-606.20	-638.10
CAediting_587848	ENST00000490528.1	chr7_102457009_-	-606.20	-606.20	-638.10
CAediting_587849	ENST00000490528.1	chr7_102457032_-	-606.20	-606.20	-638.10
CAediting_587850	ENST00000490528.1	chr7_102457033_-	-606.90	-606.20	-638.10
CAediting_587851	ENST00000490528.1	chr7_102457045_-	-608.90	-606.20	-638.10
CAediting_587852	ENST00000490528.1	chr7_102457056_-	-607.50	-606.20	-638.10
CAediting_587853	ENST00000490528.1	chr7_102457066_-	-605.80	-606.20	-638.10
CAediting_587854	ENST00000490528.1	chr7_102457079_-	-608.60	-606.20	-638.10
CAediting_587855	ENST00000490528.1	chr7_102457093_-	-606.20	-606.20	-638.10
CAediting_587856	ENST00000490528.1	chr7_102457095_-	-606.40	-606.20	-638.10
CAediting_587857	ENST00000490528.1	chr7_102457096_-	-605.30	-606.20	-638.10
CAediting_587858	ENST00000490528.1	chr7_102457101_-	-606.90	-606.20	-638.10
CAediting_587859	ENST00000490528.1	chr7_102457102_-	-609.30	-606.20	-638.10
CAediting_587860	ENST00000490528.1	chr7_102457118_-	-605.70	-606.20	-638.10

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Relation with ADAR for ALKBH4

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for ALKBH4

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for ALKBH4

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ALKBH4

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ALKBH4

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene