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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: NSMCE4A (CAeditome ID:54780)

Gene summary for NSMCE4A

check button Gene summary
Gene informationGene symbol

NSMCE4A

Gene ID

54780

Gene nameNSE4 homolog A, SMC5-SMC6 complex component
SynonymsC10orf86|NS4EA|NSE4A
Cytomap

10q26.13

Type of geneprotein-coding
Descriptionnon-structural maintenance of chromosomes element 4 homolog ANSE4 homolog, SMC5-SMC6 complex component Anon-SMC element 4 homolog A
Modification date20210518
UniProtAcc

Q9NXX6

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
NSMCE4A

GO:0005654

Non-structural maintenance of chromosomes element 4 homolog A

0000052

NSMCE4A

GO:0016604

Non-structural maintenance of chromosomes element 4 homolog A

0000052

NSMCE4A

GO:0030915

Non-structural maintenance of chromosomes element 4 homolog A

18086888


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RNA A-to-I events for NSMCE4A

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000107672.13
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_786951(121957432, -), CAediting_786952(121957468, -), CAediting_786953(121957498, -), CAediting_786954(121957500, -), CAediting_786955(121957506, -), CAediting_786956(121957510, -), CAediting_786957(121957517, -), CAediting_786958(121957519, -), CAediting_786959(121957530, -), CAediting_786960(121957531, -), CAediting_786961(121957539, -), CAediting_786962(121957540, -), CAediting_786963(121957542, -), CAediting_786964(121957545, -), CAediting_786965(121957549, -), CAediting_786966(121957555, -), CAediting_786967(121957566, -), CAediting_786968(121957572, -), CAediting_786969(121957598, -), CAediting_786970(121957601, -), CAediting_786971(121957612, -), CAediting_786972(121957613, -), CAediting_786973(121957614, -), CAediting_786974(121957629, -), CAediting_786975(121957631, -), CAediting_786976(121957637, -), CAediting_786977(121957639, -), CAediting_786978(121957652, -), CAediting_786979(121957663, -), CAediting_786980(121957671, -), CAediting_786981(121957690, -), CAediting_786982(121957698, -), CAediting_786983(121957701, -), CAediting_786984(121957706, -), CAediting_786985(121957707, -), CAediting_786986(121957713, -), CAediting_786987(121957723, -), CAediting_786988(121958045, -), CAediting_786989(121958048, -), CAediting_786990(121958100, -), CAediting_786991(121958106, -), CAediting_786992(121958116, -), CAediting_786993(121958146, -), CAediting_786994(121958176, -), CAediting_786995(121958208, -), CAediting_786996(121958645, -), CAediting_786997(121958654, -), CAediting_786998(121958676, -), CAediting_786999(121958681, -), CAediting_787000(121958708, -), CAediting_787001(121958740, -), CAediting_787002(121958883, -), CAediting_787003(121958997, -), CAediting_787004(121959003, -), CAediting_787005(121959010, -), CAediting_787006(121959011, -), CAediting_787007(121959042, -), CAediting_787008(121961858, -), CAediting_787009(121961906, -), CAediting_787010(121961910, -), CAediting_787011(121961920, -), CAediting_787012(121961931, -), CAediting_787013(121961937, -), CAediting_787014(121961940, -), CAediting_787015(121961970, -), CAediting_787016(121961988, -), CAediting_787017(121961998, -), CAediting_787018(121962010, -), CAediting_787019(121962023, -), CAediting_787020(121962024, -), CAediting_787021(121962027, -), CAediting_787022(121962028, -), CAediting_787023(121962041, -), CAediting_787024(121962066, -), CAediting_787025(121962072, -), CAediting_787026(121962162, -), CAediting_787027(121962174, -), CAediting_787028(121962229, -), CAediting_787029(121962251, -), CAediting_787030(121962254, -), CAediting_787031(121962284, -), CAediting_787032(121962297, -), CAediting_787033(121962307, -), CAediting_787034(121962675, -), CAediting_787035(121962680, -), CAediting_787036(121962685, -), CAediting_787037(121962750, -), CAediting_787038(121962751, -), CAediting_787039(121962764, -), CAediting_787040(121962787, -), CAediting_787041(121962790, -), CAediting_787042(121962791, -), CAediting_787043(121962794, -), CAediting_787044(121962815, -), CAediting_787045(121962836, -), CAediting_787046(121962867, -), CAediting_787047(121962873, -), CAediting_787048(121963460, -), CAediting_787049(121963464, -), CAediting_787050(121963465, -), CAediting_787051(121963493, -), CAediting_787052(121963520, -), CAediting_787053(121963523, -), CAediting_787054(121963528, -), CAediting_787055(121963554, -), CAediting_787056(121963555, -), CAediting_787057(121963569, -), CAediting_787058(121963601, -), CAediting_787059(121963687, -), CAediting_787060(121963691, -), CAediting_787061(121963716, -), CAediting_787062(121963758, -), CAediting_787063(121963864, -), CAediting_787064(121963873, -), CAediting_787065(121963905, -), CAediting_787066(121963912, -), CAediting_787067(121963929, -), CAediting_787068(121963931, -), CAediting_787069(121963948, -), CAediting_787070(121963974, -), CAediting_787071(121963996, -), CAediting_787072(121964049, -), CAediting_787073(121964215, -), CAediting_787074(121964232, -), CAediting_787075(121964275, -), CAediting_787076(121964280, -), CAediting_787077(121964303, -), CAediting_787078(121964307, -), CAediting_787079(121964321, -), CAediting_787080(121964324, -), CAediting_787081(121964348, -), CAediting_787082(121964365, -), CAediting_787083(121964396, -), CAediting_787084(121964413, -), CAediting_787085(121964418, -), CAediting_787086(121964529, -), CAediting_787087(121964580, -), CAediting_787088(121964598, -), CAediting_787089(121964620, -), CAediting_787090(121964658, -), CAediting_787091(121964674, -), CAediting_787092(121964682, -),

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RNA editing positional annotations for NSMCE4A using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_787019chr10_121962023_-nonsynonymous SNVENST00000369017.5c.A929Gp.N310SDPN
CAediting_787020chr10_121962024_-nonsynonymous SNVENST00000369017.5c.A928Gp.N310DDPN
CAediting_787021chr10_121962027_-nonsynonymous SNVENST00000369017.5c.A925Gp.S309GDBN
CAediting_787023chr10_121962041_-nonsynonymous SNVENST00000369017.5c.A911Gp.H304RDBN
CAediting_787024chr10_121962066_-nonsynonymous SNVENST00000369017.5c.A886Gp.T296ADBN
CAediting_787025chr10_121962072_-nonsynonymous SNVENST00000369017.5c.A880Gp.S294GDBN

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_786951chr10_121957432_-ncRNA_intronic
CAediting_786952chr10_121957468_-ncRNA_intronic
CAediting_786953chr10_121957498_-ncRNA_intronic
CAediting_786954chr10_121957500_-ncRNA_intronic
CAediting_786955chr10_121957506_-ncRNA_intronic
CAediting_786956chr10_121957510_-ncRNA_intronic
CAediting_786957chr10_121957517_-ncRNA_intronic
CAediting_786958chr10_121957519_-ncRNA_intronic
CAediting_786959chr10_121957530_-ncRNA_intronic
CAediting_786960chr10_121957531_-ncRNA_intronic
CAediting_786961chr10_121957539_-ncRNA_intronic
CAediting_786962chr10_121957540_-ncRNA_intronic
CAediting_786963chr10_121957542_-ncRNA_intronic
CAediting_786964chr10_121957545_-ncRNA_intronic
CAediting_786965chr10_121957549_-ncRNA_intronic
CAediting_786966chr10_121957555_-ncRNA_intronic
CAediting_786967chr10_121957566_-ncRNA_intronic
CAediting_786968chr10_121957572_-ncRNA_intronic
CAediting_786969chr10_121957598_-ncRNA_intronic
CAediting_786970chr10_121957601_-ncRNA_intronic
CAediting_786971chr10_121957612_-ncRNA_intronic
CAediting_786972chr10_121957613_-ncRNA_intronic
CAediting_786973chr10_121957614_-ncRNA_intronic
CAediting_786974chr10_121957629_-ncRNA_intronic
CAediting_786975chr10_121957631_-ncRNA_intronic
CAediting_786976chr10_121957637_-ncRNA_intronic
CAediting_786977chr10_121957639_-ncRNA_intronic
CAediting_786978chr10_121957652_-ncRNA_intronic
CAediting_786979chr10_121957663_-ncRNA_intronic
CAediting_786980chr10_121957671_-ncRNA_intronic
CAediting_786981chr10_121957690_-ncRNA_intronic
CAediting_786982chr10_121957698_-ncRNA_intronic
CAediting_786983chr10_121957701_-ncRNA_intronic
CAediting_786984chr10_121957706_-ncRNA_intronic
CAediting_786985chr10_121957707_-ncRNA_intronic
CAediting_786986chr10_121957713_-ncRNA_intronic
CAediting_786987chr10_121957723_-ncRNA_intronic
CAediting_786988chr10_121958045_-ncRNA_intronic
CAediting_786989chr10_121958048_-ncRNA_intronic
CAediting_786990chr10_121958100_-ncRNA_intronic
CAediting_786991chr10_121958106_-ncRNA_intronic
CAediting_786992chr10_121958116_-ncRNA_intronic
CAediting_786993chr10_121958146_-ncRNA_intronic
CAediting_786994chr10_121958176_-ncRNA_intronic
CAediting_786995chr10_121958208_-ncRNA_intronic
CAediting_786996chr10_121958645_-ncRNA_intronic
CAediting_786997chr10_121958654_-ncRNA_intronic
CAediting_786998chr10_121958676_-ncRNA_intronic
CAediting_786999chr10_121958681_-ncRNA_intronic
CAediting_787000chr10_121958708_-ncRNA_intronic
CAediting_787001chr10_121958740_-ncRNA_intronic
CAediting_787002chr10_121958883_-ncRNA_intronic
CAediting_787003chr10_121958997_-ncRNA_intronic
CAediting_787004chr10_121959003_-ncRNA_intronic
CAediting_787005chr10_121959010_-ncRNA_intronic
CAediting_787006chr10_121959011_-ncRNA_intronic
CAediting_787007chr10_121959042_-ncRNA_intronic
CAediting_787008chr10_121961858_-ncRNA_exonic
CAediting_787009chr10_121961906_-ncRNA_exonic
CAediting_787010chr10_121961910_-ncRNA_exonic
CAediting_787011chr10_121961920_-ncRNA_exonic
CAediting_787012chr10_121961931_-ncRNA_exonic
CAediting_787013chr10_121961937_-ncRNA_exonic
CAediting_787014chr10_121961940_-ncRNA_exonic
CAediting_787015chr10_121961970_-ncRNA_exonic
CAediting_787016chr10_121961988_-ncRNA_exonic
CAediting_787017chr10_121961998_-ncRNA_exonic
CAediting_787018chr10_121962010_-exonic
CAediting_787019chr10_121962023_-exonic
CAediting_787020chr10_121962024_-exonic
CAediting_787021chr10_121962027_-exonic
CAediting_787022chr10_121962028_-exonic
CAediting_787023chr10_121962041_-exonic
CAediting_787024chr10_121962066_-exonic
CAediting_787025chr10_121962072_-exonic
CAediting_787026chr10_121962162_-ncRNA_intronic
CAediting_787027chr10_121962174_-ncRNA_intronic
CAediting_787028chr10_121962229_-ncRNA_intronic
CAediting_787029chr10_121962251_-ncRNA_intronic
CAediting_787030chr10_121962254_-ncRNA_intronic
CAediting_787031chr10_121962284_-ncRNA_intronic
CAediting_787032chr10_121962297_-ncRNA_intronic
CAediting_787033chr10_121962307_-ncRNA_intronic
CAediting_787034chr10_121962675_-ncRNA_intronic
CAediting_787035chr10_121962680_-ncRNA_intronic
CAediting_787036chr10_121962685_-ncRNA_intronic
CAediting_787037chr10_121962750_-ncRNA_intronic
CAediting_787038chr10_121962751_-ncRNA_intronic
CAediting_787039chr10_121962764_-ncRNA_intronic
CAediting_787040chr10_121962787_-ncRNA_intronic
CAediting_787041chr10_121962790_-ncRNA_intronic
CAediting_787042chr10_121962791_-ncRNA_intronic
CAediting_787043chr10_121962794_-ncRNA_intronic
CAediting_787044chr10_121962815_-ncRNA_intronic
CAediting_787045chr10_121962836_-ncRNA_intronic
CAediting_787046chr10_121962867_-ncRNA_intronic
CAediting_787047chr10_121962873_-ncRNA_intronic
CAediting_787048chr10_121963460_-ncRNA_intronic
CAediting_787049chr10_121963464_-ncRNA_intronic
CAediting_787050chr10_121963465_-ncRNA_intronic
CAediting_787051chr10_121963493_-ncRNA_intronic
CAediting_787052chr10_121963520_-ncRNA_intronic
CAediting_787053chr10_121963523_-ncRNA_intronic
CAediting_787054chr10_121963528_-ncRNA_intronic
CAediting_787055chr10_121963554_-ncRNA_intronic
CAediting_787056chr10_121963555_-ncRNA_intronic
CAediting_787057chr10_121963569_-ncRNA_intronic
CAediting_787058chr10_121963601_-ncRNA_intronic
CAediting_787059chr10_121963687_-ncRNA_intronic
CAediting_787060chr10_121963691_-ncRNA_intronic
CAediting_787061chr10_121963716_-ncRNA_intronic
CAediting_787062chr10_121963758_-ncRNA_intronic
CAediting_787063chr10_121963864_-ncRNA_intronic
CAediting_787064chr10_121963873_-ncRNA_intronic
CAediting_787065chr10_121963905_-ncRNA_intronic
CAediting_787066chr10_121963912_-ncRNA_intronic
CAediting_787067chr10_121963929_-ncRNA_intronic
CAediting_787068chr10_121963931_-ncRNA_intronic
CAediting_787069chr10_121963948_-ncRNA_intronic
CAediting_787070chr10_121963974_-ncRNA_intronic
CAediting_787071chr10_121963996_-ncRNA_intronic
CAediting_787072chr10_121964049_-ncRNA_intronic
CAediting_787073chr10_121964215_-ncRNA_intronic
CAediting_787074chr10_121964232_-ncRNA_intronic
CAediting_787075chr10_121964275_-ncRNA_intronic
CAediting_787076chr10_121964280_-ncRNA_intronic
CAediting_787077chr10_121964303_-ncRNA_intronic
CAediting_787078chr10_121964307_-ncRNA_intronic
CAediting_787079chr10_121964321_-ncRNA_intronic
CAediting_787080chr10_121964324_-ncRNA_intronic
CAediting_787081chr10_121964348_-ncRNA_intronic
CAediting_787082chr10_121964365_-ncRNA_intronic
CAediting_787083chr10_121964396_-ncRNA_intronic
CAediting_787084chr10_121964413_-ncRNA_intronic
CAediting_787085chr10_121964418_-ncRNA_intronic
CAediting_787086chr10_121964529_-ncRNA_intronic
CAediting_787087chr10_121964580_-ncRNA_intronic
CAediting_787088chr10_121964598_-ncRNA_intronic
CAediting_787089chr10_121964620_-ncRNA_intronic
CAediting_787090chr10_121964658_-ncRNA_intronic
CAediting_787091chr10_121964674_-ncRNA_intronic
CAediting_787092chr10_121964682_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_786951chr10_121957432_-SINEAluAluY
CAediting_786952chr10_121957468_-SINEAluAluY
CAediting_786953chr10_121957498_-SINEAluAluY
CAediting_786954chr10_121957500_-SINEAluAluY
CAediting_786955chr10_121957506_-SINEAluAluY
CAediting_786956chr10_121957510_-SINEAluAluY
CAediting_786957chr10_121957517_-SINEAluAluY
CAediting_786958chr10_121957519_-SINEAluAluY
CAediting_786959chr10_121957530_-SINEAluAluY
CAediting_786960chr10_121957531_-SINEAluAluY
CAediting_786961chr10_121957539_-SINEAluAluY
CAediting_786962chr10_121957540_-SINEAluAluY
CAediting_786963chr10_121957542_-SINEAluAluY
CAediting_786964chr10_121957545_-SINEAluAluY
CAediting_786965chr10_121957549_-SINEAluAluY
CAediting_786966chr10_121957555_-SINEAluAluY
CAediting_786967chr10_121957566_-SINEAluAluY
CAediting_786968chr10_121957572_-SINEAluAluY
CAediting_786969chr10_121957598_-SINEAluAluY
CAediting_786970chr10_121957601_-SINEAluAluY
CAediting_786971chr10_121957612_-SINEAluAluY
CAediting_786972chr10_121957613_-SINEAluAluY
CAediting_786973chr10_121957614_-SINEAluAluY
CAediting_786974chr10_121957629_-SINEAluAluY
CAediting_786975chr10_121957631_-SINEAluAluY
CAediting_786976chr10_121957637_-SINEAluAluY
CAediting_786977chr10_121957639_-SINEAluAluY
CAediting_786978chr10_121957652_-SINEAluAluY
CAediting_786979chr10_121957663_-SINEAluAluY
CAediting_786980chr10_121957671_-SINEAluAluY
CAediting_786981chr10_121957690_-SINEAluAluY
CAediting_786982chr10_121957698_-SINEAluAluY
CAediting_786983chr10_121957701_-SINEAluAluY
CAediting_786984chr10_121957706_-SINEAluAluY
CAediting_786985chr10_121957707_-SINEAluAluY
CAediting_786986chr10_121957713_-SINEAluAluY
CAediting_786987chr10_121957723_-SINEAluAluY
CAediting_786988chr10_121958045_-SINEAluAluSg
CAediting_786989chr10_121958048_-SINEAluAluSg
CAediting_786990chr10_121958100_-SINEAluAluSg
CAediting_786991chr10_121958106_-SINEAluAluSg
CAediting_786992chr10_121958116_-SINEAluAluSg
CAediting_786993chr10_121958146_-SINEAluAluSg
CAediting_786994chr10_121958176_-SINEAluAluSg
CAediting_786995chr10_121958208_-SINEAluAluSg
CAediting_786996chr10_121958645_-SINEAluFLAM_C
CAediting_786997chr10_121958654_-SINEAluFLAM_C
CAediting_786998chr10_121958676_-SINEAluFLAM_C
CAediting_786999chr10_121958681_-SINEAluFLAM_C
CAediting_787000chr10_121958708_-SINEAluFLAM_C
CAediting_787001chr10_121958740_-SINEAluFLAM_C
CAediting_787002chr10_121958883_-SINEAluAluSg
CAediting_787003chr10_121958997_-SINEAluAluSg
CAediting_787004chr10_121959003_-SINEAluAluSg
CAediting_787005chr10_121959010_-SINEAluAluSg
CAediting_787006chr10_121959011_-SINEAluAluSg
CAediting_787007chr10_121959042_-SINEAluAluSg
CAediting_787008chr10_121961858_-SINEAluAluSx
CAediting_787009chr10_121961906_-SINEAluAluSx
CAediting_787010chr10_121961910_-SINEAluAluSx
CAediting_787011chr10_121961920_-SINEAluAluSx
CAediting_787012chr10_121961931_-SINEAluAluSx
CAediting_787013chr10_121961937_-SINEAluAluSx
CAediting_787014chr10_121961940_-SINEAluAluSx
CAediting_787015chr10_121961970_-SINEAluAluSx
CAediting_787016chr10_121961988_-SINEAluAluSx
CAediting_787017chr10_121961998_-SINEAluAluSx
CAediting_787018chr10_121962010_-SINEAluAluSx
CAediting_787019chr10_121962023_-SINEAluAluSx
CAediting_787020chr10_121962024_-SINEAluAluSx
CAediting_787021chr10_121962027_-SINEAluAluSx
CAediting_787022chr10_121962028_-SINEAluAluSx
CAediting_787023chr10_121962041_-SINEAluAluSx
CAediting_787024chr10_121962066_-SINEAluAluSx
CAediting_787025chr10_121962072_-SINEAluAluSx
CAediting_787026chr10_121962162_-SINEAluAluY
CAediting_787027chr10_121962174_-SINEAluAluY
CAediting_787028chr10_121962229_-SINEAluAluY
CAediting_787029chr10_121962251_-SINEAluAluY
CAediting_787030chr10_121962254_-SINEAluAluY
CAediting_787031chr10_121962284_-SINEAluAluY
CAediting_787032chr10_121962297_-SINEAluAluY
CAediting_787033chr10_121962307_-SINEAluAluY
CAediting_787034chr10_121962675_-SINEAluAluSp
CAediting_787035chr10_121962680_-SINEAluAluSp
CAediting_787036chr10_121962685_-SINEAluAluSp
CAediting_787037chr10_121962750_-SINEAluAluSp
CAediting_787038chr10_121962751_-SINEAluAluSp
CAediting_787039chr10_121962764_-SINEAluAluSp
CAediting_787040chr10_121962787_-SINEAluAluSp
CAediting_787041chr10_121962790_-SINEAluAluSp
CAediting_787042chr10_121962791_-SINEAluAluSp
CAediting_787043chr10_121962794_-SINEAluAluSp
CAediting_787044chr10_121962815_-SINEAluAluSp
CAediting_787045chr10_121962836_-SINEAluAluSp
CAediting_787046chr10_121962867_-SINEAluAluSp
CAediting_787047chr10_121962873_-SINEAluAluSp
CAediting_787048chr10_121963460_-SINEAluAluJr
CAediting_787049chr10_121963464_-SINEAluAluJr
CAediting_787050chr10_121963465_-SINEAluAluJr
CAediting_787051chr10_121963493_-SINEAluAluJr
CAediting_787052chr10_121963520_-SINEAluAluJr
CAediting_787053chr10_121963523_-SINEAluAluJr
CAediting_787054chr10_121963528_-SINEAluAluJr
CAediting_787055chr10_121963554_-SINEAluAluJr
CAediting_787056chr10_121963555_-SINEAluAluJr
CAediting_787057chr10_121963569_-SINEAluAluJr
CAediting_787058chr10_121963601_-SINEAluAluJr
CAediting_787059chr10_121963687_-SINEAluAluY
CAediting_787060chr10_121963691_-SINEAluAluY
CAediting_787061chr10_121963716_-SINEAluAluY
CAediting_787062chr10_121963758_-SINEAluAluY
CAediting_787063chr10_121963864_-SINEAluAluSg
CAediting_787064chr10_121963873_-SINEAluAluSg
CAediting_787065chr10_121963905_-SINEAluAluSg
CAediting_787066chr10_121963912_-SINEAluAluSg
CAediting_787067chr10_121963929_-SINEAluAluSg
CAediting_787068chr10_121963931_-SINEAluAluSg
CAediting_787069chr10_121963948_-SINEAluAluSg
CAediting_787070chr10_121963974_-SINEAluAluSg
CAediting_787071chr10_121963996_-SINEAluAluSg
CAediting_787072chr10_121964049_-SINEAluAluSg
CAediting_787073chr10_121964215_-SINEAluAluSx1
CAediting_787074chr10_121964232_-SINEAluAluSx1
CAediting_787075chr10_121964275_-SINEAluAluSx1
CAediting_787076chr10_121964280_-SINEAluAluSx1
CAediting_787077chr10_121964303_-SINEAluAluSx1
CAediting_787078chr10_121964307_-SINEAluAluSx1
CAediting_787079chr10_121964321_-SINEAluAluSx1
CAediting_787080chr10_121964324_-SINEAluAluSx1
CAediting_787081chr10_121964348_-SINEAluAluSx1
CAediting_787082chr10_121964365_-SINEAluAluSx1
CAediting_787083chr10_121964396_-SINEAluAluSx1
CAediting_787084chr10_121964413_-SINEAluAluSx1
CAediting_787085chr10_121964418_-SINEAluAluSx1
CAediting_787086chr10_121964529_-SINEAluAluSx4
CAediting_787087chr10_121964580_-SINEAluAluSx4
CAediting_787088chr10_121964598_-SINEAluAluSx4
CAediting_787089chr10_121964620_-SINEAluAluSx4
CAediting_787090chr10_121964658_-SINEAluAluSx4
CAediting_787091chr10_121964674_-SINEAluAluSx4
CAediting_787092chr10_121964682_-SINEAluAluSx4

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RNA A-to-I editing events in the alternative splicing sites for NSMCE4A

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_787013chr10_121961937_-121961936:1219619583SS2+0iTTTTTTTTCTGTATTTTTAGTAG7.08TTTTTTTTCTGTATTTTTAGTGG8.4
ESCAediting_787014chr10_121961940_-121961936:1219619583SS0+2iTTTTTTTTCTGTATTTTTAGTAG7.08TTTTTTTTCTGTATTTTTGGTAG-0.88

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000107672.13.NSMCE4A.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000107672.13.NSMCE4A.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NSMCE4A

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for NSMCE4A

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for NSMCE4A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_787010chr10_121961910_-ENSG00000107672.13ENST00000369017hsa-miR-3190-5p1219619101219619167mer-m8121961909121961928146.00-20.24
CAediting_787008chr10_121961858_-ENSG00000107672.13ENST00000369017hsa-miR-3189-3p1219618571219618637mer-m8121961856121961878150.00-26.23
CAediting_787008chr10_121961858_-ENSG00000107672.13ENST00000369017hsa-miR-6813-3p1219618561219618627mer-m8121961855121961875140.00-11.74

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_787010chr10_121961910_-ENSG00000107672.13ENST00000369017hsa-miR-44531219619061219619138mer-1a121961906121961927153-19.5
CAediting_787010chr10_121961910_-ENSG00000107672.13ENST00000369017hsa-miR-45381219619061219619138mer-1a121961906121961927153-19.2
CAediting_787009chr10_121961906_-ENSG00000107672.13ENST00000369017hsa-miR-4661-5p1219619041219619107mer-m8121961903121961923146-13.56
CAediting_787013chr10_121961937_-ENSG00000107672.13ENST00000369017hsa-miR-4684-5p1219619331219619397mer-m8121961932121961954152-14.61
CAediting_787015chr10_121961970_-ENSG00000107672.13ENST00000369017hsa-miR-576-3p1219619651219619717mer-m8121961964121961985145-19.64
CAediting_787013chr10_121961937_-ENSG00000107672.13ENST00000369017hsa-miR-593-3p1219619311219619377mer-1a121961931121961949140-19.02
CAediting_787012chr10_121961931_-ENSG00000107672.13ENST00000369017hsa-miR-6818-3p1219619311219619377mer-m8121961930121961951140-13.54

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NSMCE4A

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for NSMCE4A

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for NSMCE4A

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for NSMCE4A

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for NSMCE4A

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for NSMCE4A

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource