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Editing gene: KLHDC4 (CAeditome ID:54758)

Gene summary for KLHDC4

Gene summary

Gene information	Gene symbol	KLHDC4
	Gene ID	54758
	Gene name	kelch domain containing 4
	Synonyms	-
	Cytomap	16q24.2
	Type of gene	protein-coding
	Description	kelch domain-containing protein 4
	Modification date	20210518
	UniProtAcc	Q8TBB5
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for KLHDC4

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000104731.12

RNA A-to-I editing events in Cancer.

CAediting_1142705(87699431, -), CAediting_1142706(87699449, -), CAediting_1142707(87699451, -), CAediting_1142708(87699472, -), CAediting_1142709(87699577, -), CAediting_1142710(87699616, -), CAediting_1142711(87699691, -), CAediting_1142712(87727941, -), CAediting_1142713(87727969, -), CAediting_1142714(87728001, -), CAediting_1142715(87728003, -), CAediting_1142716(87728039, -), CAediting_1142717(87728065, -), CAediting_1142718(87728075, -), CAediting_1142719(87728087, -), CAediting_1142720(87728103, -), CAediting_1142721(87728104, -), CAediting_1142722(87728105, -), CAediting_1142723(87728111, -), CAediting_1142724(87728135, -), CAediting_1142725(87728171, -), CAediting_1142726(87728737, -), CAediting_1142727(87728787, -), CAediting_1142728(87728799, -), CAediting_1142729(87728816, -), CAediting_1142730(87728830, -), CAediting_1142731(87728831, -), CAediting_1142732(87728835, -), CAediting_1142733(87728885, -), CAediting_1142734(87728935, -), CAediting_1142735(87728956, -), CAediting_1142736(87728959, -), CAediting_1142737(87729009, -), CAediting_1142738(87729049, -), CAediting_1142739(87730050, -), CAediting_1142740(87730131, -), CAediting_1142741(87730153, -), CAediting_1142742(87730180, -), CAediting_1142743(87731086, -), CAediting_1142744(87731099, -), CAediting_1142745(87731116, -), CAediting_1142746(87731117, -), CAediting_1142747(87731121, -), CAediting_1142748(87731136, -), CAediting_1142749(87731147, -), CAediting_1142750(87731148, -), CAediting_1142751(87731160, -), CAediting_1142752(87731161, -), CAediting_1142753(87731169, -), CAediting_1142754(87731179, -), CAediting_1142755(87731185, -), CAediting_1142756(87731188, -), CAediting_1142757(87731192, -), CAediting_1142758(87731196, -), CAediting_1142759(87731201, -), CAediting_1142760(87731202, -), CAediting_1142761(87731210, -), CAediting_1142762(87731224, -), CAediting_1142763(87731228, -), CAediting_1142764(87731231, -), CAediting_1142765(87731233, -), CAediting_1142766(87731235, -), CAediting_1142767(87731238, -), CAediting_1142768(87731240, -), CAediting_1142769(87731258, -), CAediting_1142770(87731259, -), CAediting_1142771(87731260, -), CAediting_1142772(87731268, -), CAediting_1142773(87731269, -), CAediting_1142774(87731278, -), CAediting_1142775(87731281, -), CAediting_1142776(87731292, -), CAediting_1142777(87731297, -), CAediting_1142778(87731318, -), CAediting_1142779(87731336, -), CAediting_1142780(87731339, -), CAediting_1142781(87731344, -), CAediting_1142782(87731345, -), CAediting_1142783(87731361, -), CAediting_1142784(87731363, -), CAediting_1142785(87731380, -), CAediting_1142786(87732130, -), CAediting_1142787(87732161, -), CAediting_1142788(87732163, -), CAediting_1142789(87732168, -), CAediting_1142790(87732172, -), CAediting_1142791(87732192, -), CAediting_1142792(87732198, -), CAediting_1142793(87732204, -), CAediting_1142794(87732211, -), CAediting_1142795(87732224, -), CAediting_1142796(87732228, -), CAediting_1142797(87732233, -), CAediting_1142798(87732234, -), CAediting_1142799(87732240, -), CAediting_1142800(87732244, -), CAediting_1142801(87732260, -), CAediting_1142802(87732263, -), CAediting_1142803(87732264, -), CAediting_1142804(87732265, -), CAediting_1142805(87732266, -), CAediting_1142806(87732269, -), CAediting_1142807(87732273, -), CAediting_1142808(87732275, -), CAediting_1142809(87732289, -), CAediting_1142810(87732290, -), CAediting_1142811(87732291, -), CAediting_1142812(87732294, -), CAediting_1142813(87732300, -), CAediting_1142814(87732323, -), CAediting_1142815(87732338, -), CAediting_1142816(87732342, -), CAediting_1142817(87732368, -), CAediting_1142818(87732369, -), CAediting_1142819(87732391, -), CAediting_1142820(87734102, -), CAediting_1142821(87734103, -), CAediting_1142822(87734117, -), CAediting_1142823(87734125, -), CAediting_1142824(87734165, -), CAediting_1142825(87734173, -), CAediting_1142826(87734182, -), CAediting_1142827(87734188, -), CAediting_1142828(87734193, -), CAediting_1142829(87734197, -), CAediting_1142830(87734201, -), CAediting_1142831(87734207, -), CAediting_1142832(87734220, -), CAediting_1142833(87734222, -), CAediting_1142834(87734244, -), CAediting_1142835(87734258, -), CAediting_1142836(87734261, -), CAediting_1142837(87734262, -), CAediting_1142838(87734275, -), CAediting_1142839(87734282, -), CAediting_1142840(87734311, -), CAediting_1142841(87736899, -), CAediting_1142842(87737003, -), CAediting_1142843(87737063, -), CAediting_1142844(87737068, -), CAediting_1142845(87737322, -), CAediting_1142846(87737383, -), CAediting_1142847(87737396, -), CAediting_1142848(87737422, -), CAediting_1142849(87737464, -), CAediting_1142850(87737476, -), CAediting_1142851(87737479, -), CAediting_1142852(87737480, -), CAediting_1142853(87737488, -), CAediting_1142854(87737505, -), CAediting_1142855(87737525, -), CAediting_1142856(87737526, -), CAediting_1142857(87737531, -), CAediting_1142858(87737541, -), CAediting_1142859(87737655, -), CAediting_1142860(87737660, -), CAediting_1142861(87737664, -), CAediting_1142862(87737667, -), CAediting_1142863(87737693, -), CAediting_1142864(87737703, -), CAediting_1142865(87737725, -), CAediting_1142866(87737726, -), CAediting_1142867(87737732, -), CAediting_1142868(87737748, -), CAediting_1142869(87737752, -), CAediting_1142870(87737763, -), CAediting_1142871(87737765, -), CAediting_1142872(87737792, -), CAediting_1142873(87737794, -), CAediting_1142874(87737809, -), CAediting_1142875(87737818, -), CAediting_1142876(87737828, -), CAediting_1142877(87737837, -), CAediting_1142878(87737863, -), CAediting_1142879(87737864, -), CAediting_1142880(87737870, -), CAediting_1142881(87737880, -), CAediting_1142882(87743178, -), CAediting_1142883(87743238, -), CAediting_1142884(87743243, -), CAediting_1142885(87743244, -), CAediting_1142886(87743283, -), CAediting_1142887(87743290, -), CAediting_1142888(87743298, -), CAediting_1142889(87743299, -), CAediting_1142890(87743313, -), CAediting_1142891(87743354, -), CAediting_1142892(87743367, -), CAediting_1142893(87743551, -), CAediting_1142894(87743559, -), CAediting_1142895(87743616, -), CAediting_1142896(87744523, -), CAediting_1142897(87744542, -), CAediting_1142898(87746007, -), CAediting_1142899(87746017, -), CAediting_1142900(87746046, -), CAediting_1142901(87746148, -), CAediting_1142902(87746158, -), CAediting_1142903(87746161, -), CAediting_1142904(87746187, -), CAediting_1142905(87746188, -), CAediting_1142906(87746236, -), CAediting_1142907(87756881, -), CAediting_1142908(87756936, -), CAediting_1142909(87756983, -),

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RNA editing positional annotations for KLHDC4 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1142705	chr16_87699431_-	UTR3
CAediting_1142706	chr16_87699449_-	UTR3
CAediting_1142707	chr16_87699451_-	UTR3
CAediting_1142708	chr16_87699472_-	UTR3
CAediting_1142709	chr16_87699577_-	UTR3
CAediting_1142710	chr16_87699616_-	UTR3
CAediting_1142711	chr16_87699691_-	UTR3
CAediting_1142712	chr16_87727941_-	ncRNA_intronic
CAediting_1142713	chr16_87727969_-	ncRNA_intronic
CAediting_1142714	chr16_87728001_-	ncRNA_intronic
CAediting_1142715	chr16_87728003_-	ncRNA_intronic
CAediting_1142716	chr16_87728039_-	ncRNA_intronic
CAediting_1142717	chr16_87728065_-	ncRNA_intronic
CAediting_1142718	chr16_87728075_-	ncRNA_intronic
CAediting_1142719	chr16_87728087_-	ncRNA_intronic
CAediting_1142720	chr16_87728103_-	ncRNA_intronic
CAediting_1142721	chr16_87728104_-	ncRNA_intronic
CAediting_1142722	chr16_87728105_-	ncRNA_intronic
CAediting_1142723	chr16_87728111_-	ncRNA_intronic
CAediting_1142724	chr16_87728135_-	ncRNA_intronic
CAediting_1142725	chr16_87728171_-	ncRNA_intronic
CAediting_1142726	chr16_87728737_-	ncRNA_intronic
CAediting_1142727	chr16_87728787_-	ncRNA_intronic
CAediting_1142728	chr16_87728799_-	ncRNA_intronic
CAediting_1142729	chr16_87728816_-	ncRNA_intronic
CAediting_1142730	chr16_87728830_-	ncRNA_intronic
CAediting_1142731	chr16_87728831_-	ncRNA_intronic
CAediting_1142732	chr16_87728835_-	ncRNA_intronic
CAediting_1142733	chr16_87728885_-	ncRNA_intronic
CAediting_1142734	chr16_87728935_-	ncRNA_intronic
CAediting_1142735	chr16_87728956_-	ncRNA_intronic
CAediting_1142736	chr16_87728959_-	ncRNA_intronic
CAediting_1142737	chr16_87729009_-	ncRNA_intronic
CAediting_1142738	chr16_87729049_-	ncRNA_intronic
CAediting_1142739	chr16_87730050_-	ncRNA_intronic
CAediting_1142740	chr16_87730131_-	ncRNA_intronic
CAediting_1142741	chr16_87730153_-	ncRNA_intronic
CAediting_1142742	chr16_87730180_-	ncRNA_intronic
CAediting_1142743	chr16_87731086_-	ncRNA_intronic
CAediting_1142744	chr16_87731099_-	ncRNA_intronic
CAediting_1142745	chr16_87731116_-	ncRNA_intronic
CAediting_1142746	chr16_87731117_-	ncRNA_intronic
CAediting_1142747	chr16_87731121_-	ncRNA_intronic
CAediting_1142748	chr16_87731136_-	ncRNA_intronic
CAediting_1142749	chr16_87731147_-	ncRNA_intronic
CAediting_1142750	chr16_87731148_-	ncRNA_intronic
CAediting_1142751	chr16_87731160_-	ncRNA_intronic
CAediting_1142752	chr16_87731161_-	ncRNA_intronic
CAediting_1142753	chr16_87731169_-	ncRNA_intronic
CAediting_1142754	chr16_87731179_-	ncRNA_intronic
CAediting_1142755	chr16_87731185_-	ncRNA_intronic
CAediting_1142756	chr16_87731188_-	ncRNA_intronic
CAediting_1142757	chr16_87731192_-	ncRNA_intronic
CAediting_1142758	chr16_87731196_-	ncRNA_intronic
CAediting_1142759	chr16_87731201_-	ncRNA_intronic
CAediting_1142760	chr16_87731202_-	ncRNA_intronic
CAediting_1142761	chr16_87731210_-	ncRNA_intronic
CAediting_1142762	chr16_87731224_-	ncRNA_intronic
CAediting_1142763	chr16_87731228_-	ncRNA_intronic
CAediting_1142764	chr16_87731231_-	ncRNA_intronic
CAediting_1142765	chr16_87731233_-	ncRNA_intronic
CAediting_1142766	chr16_87731235_-	ncRNA_intronic
CAediting_1142767	chr16_87731238_-	ncRNA_intronic
CAediting_1142768	chr16_87731240_-	ncRNA_intronic
CAediting_1142769	chr16_87731258_-	ncRNA_intronic
CAediting_1142770	chr16_87731259_-	ncRNA_intronic
CAediting_1142771	chr16_87731260_-	ncRNA_intronic
CAediting_1142772	chr16_87731268_-	ncRNA_intronic
CAediting_1142773	chr16_87731269_-	ncRNA_intronic
CAediting_1142774	chr16_87731278_-	ncRNA_intronic
CAediting_1142775	chr16_87731281_-	ncRNA_intronic
CAediting_1142776	chr16_87731292_-	ncRNA_intronic
CAediting_1142777	chr16_87731297_-	ncRNA_intronic
CAediting_1142778	chr16_87731318_-	ncRNA_intronic
CAediting_1142779	chr16_87731336_-	ncRNA_intronic
CAediting_1142780	chr16_87731339_-	ncRNA_intronic
CAediting_1142781	chr16_87731344_-	ncRNA_intronic
CAediting_1142782	chr16_87731345_-	ncRNA_intronic
CAediting_1142783	chr16_87731361_-	ncRNA_intronic
CAediting_1142784	chr16_87731363_-	ncRNA_intronic
CAediting_1142785	chr16_87731380_-	ncRNA_intronic
CAediting_1142786	chr16_87732130_-	ncRNA_intronic
CAediting_1142787	chr16_87732161_-	ncRNA_intronic
CAediting_1142788	chr16_87732163_-	ncRNA_intronic
CAediting_1142789	chr16_87732168_-	ncRNA_intronic
CAediting_1142790	chr16_87732172_-	ncRNA_intronic
CAediting_1142791	chr16_87732192_-	ncRNA_intronic
CAediting_1142792	chr16_87732198_-	ncRNA_intronic
CAediting_1142793	chr16_87732204_-	ncRNA_intronic
CAediting_1142794	chr16_87732211_-	ncRNA_intronic
CAediting_1142795	chr16_87732224_-	ncRNA_intronic
CAediting_1142796	chr16_87732228_-	ncRNA_intronic
CAediting_1142797	chr16_87732233_-	ncRNA_intronic
CAediting_1142798	chr16_87732234_-	ncRNA_intronic
CAediting_1142799	chr16_87732240_-	ncRNA_intronic
CAediting_1142800	chr16_87732244_-	ncRNA_intronic
CAediting_1142801	chr16_87732260_-	ncRNA_intronic
CAediting_1142802	chr16_87732263_-	ncRNA_intronic
CAediting_1142803	chr16_87732264_-	ncRNA_intronic
CAediting_1142804	chr16_87732265_-	ncRNA_intronic
CAediting_1142805	chr16_87732266_-	ncRNA_intronic
CAediting_1142806	chr16_87732269_-	ncRNA_intronic
CAediting_1142807	chr16_87732273_-	ncRNA_intronic
CAediting_1142808	chr16_87732275_-	ncRNA_intronic
CAediting_1142809	chr16_87732289_-	ncRNA_intronic
CAediting_1142810	chr16_87732290_-	ncRNA_intronic
CAediting_1142811	chr16_87732291_-	ncRNA_intronic
CAediting_1142812	chr16_87732294_-	ncRNA_intronic
CAediting_1142813	chr16_87732300_-	ncRNA_intronic
CAediting_1142814	chr16_87732323_-	ncRNA_intronic
CAediting_1142815	chr16_87732338_-	ncRNA_intronic
CAediting_1142816	chr16_87732342_-	ncRNA_intronic
CAediting_1142817	chr16_87732368_-	ncRNA_intronic
CAediting_1142818	chr16_87732369_-	ncRNA_intronic
CAediting_1142819	chr16_87732391_-	ncRNA_intronic
CAediting_1142820	chr16_87734102_-	ncRNA_intronic
CAediting_1142821	chr16_87734103_-	ncRNA_intronic
CAediting_1142822	chr16_87734117_-	ncRNA_intronic
CAediting_1142823	chr16_87734125_-	ncRNA_intronic
CAediting_1142824	chr16_87734165_-	ncRNA_intronic
CAediting_1142825	chr16_87734173_-	ncRNA_intronic
CAediting_1142826	chr16_87734182_-	ncRNA_intronic
CAediting_1142827	chr16_87734188_-	ncRNA_intronic
CAediting_1142828	chr16_87734193_-	ncRNA_intronic
CAediting_1142829	chr16_87734197_-	ncRNA_intronic
CAediting_1142830	chr16_87734201_-	ncRNA_intronic
CAediting_1142831	chr16_87734207_-	ncRNA_intronic
CAediting_1142832	chr16_87734220_-	ncRNA_intronic
CAediting_1142833	chr16_87734222_-	ncRNA_intronic
CAediting_1142834	chr16_87734244_-	ncRNA_intronic
CAediting_1142835	chr16_87734258_-	ncRNA_intronic
CAediting_1142836	chr16_87734261_-	ncRNA_intronic
CAediting_1142837	chr16_87734262_-	ncRNA_intronic
CAediting_1142838	chr16_87734275_-	ncRNA_intronic
CAediting_1142839	chr16_87734282_-	ncRNA_intronic
CAediting_1142840	chr16_87734311_-	ncRNA_intronic
CAediting_1142841	chr16_87736899_-	ncRNA_intronic
CAediting_1142842	chr16_87737003_-	ncRNA_intronic
CAediting_1142843	chr16_87737063_-	ncRNA_intronic
CAediting_1142844	chr16_87737068_-	ncRNA_intronic
CAediting_1142845	chr16_87737322_-	ncRNA_intronic
CAediting_1142846	chr16_87737383_-	ncRNA_intronic
CAediting_1142847	chr16_87737396_-	ncRNA_intronic
CAediting_1142848	chr16_87737422_-	ncRNA_intronic
CAediting_1142849	chr16_87737464_-	ncRNA_intronic
CAediting_1142850	chr16_87737476_-	ncRNA_intronic
CAediting_1142851	chr16_87737479_-	ncRNA_intronic
CAediting_1142852	chr16_87737480_-	ncRNA_intronic
CAediting_1142853	chr16_87737488_-	ncRNA_intronic
CAediting_1142854	chr16_87737505_-	ncRNA_intronic
CAediting_1142855	chr16_87737525_-	ncRNA_intronic
CAediting_1142856	chr16_87737526_-	ncRNA_intronic
CAediting_1142857	chr16_87737531_-	ncRNA_intronic
CAediting_1142858	chr16_87737541_-	ncRNA_intronic
CAediting_1142859	chr16_87737655_-	ncRNA_intronic
CAediting_1142860	chr16_87737660_-	ncRNA_intronic
CAediting_1142861	chr16_87737664_-	ncRNA_intronic
CAediting_1142862	chr16_87737667_-	ncRNA_intronic
CAediting_1142863	chr16_87737693_-	ncRNA_intronic
CAediting_1142864	chr16_87737703_-	ncRNA_intronic
CAediting_1142865	chr16_87737725_-	ncRNA_intronic
CAediting_1142866	chr16_87737726_-	ncRNA_intronic
CAediting_1142867	chr16_87737732_-	ncRNA_intronic
CAediting_1142868	chr16_87737748_-	ncRNA_intronic
CAediting_1142869	chr16_87737752_-	ncRNA_intronic
CAediting_1142870	chr16_87737763_-	ncRNA_intronic
CAediting_1142871	chr16_87737765_-	ncRNA_intronic
CAediting_1142872	chr16_87737792_-	ncRNA_intronic
CAediting_1142873	chr16_87737794_-	ncRNA_intronic
CAediting_1142874	chr16_87737809_-	ncRNA_intronic
CAediting_1142875	chr16_87737818_-	ncRNA_intronic
CAediting_1142876	chr16_87737828_-	ncRNA_intronic
CAediting_1142877	chr16_87737837_-	ncRNA_intronic
CAediting_1142878	chr16_87737863_-	ncRNA_intronic
CAediting_1142879	chr16_87737864_-	ncRNA_intronic
CAediting_1142880	chr16_87737870_-	ncRNA_intronic
CAediting_1142881	chr16_87737880_-	ncRNA_intronic
CAediting_1142882	chr16_87743178_-	ncRNA_intronic
CAediting_1142883	chr16_87743238_-	ncRNA_intronic
CAediting_1142884	chr16_87743243_-	ncRNA_intronic
CAediting_1142885	chr16_87743244_-	ncRNA_intronic
CAediting_1142886	chr16_87743283_-	ncRNA_intronic
CAediting_1142887	chr16_87743290_-	ncRNA_intronic
CAediting_1142888	chr16_87743298_-	ncRNA_intronic
CAediting_1142889	chr16_87743299_-	ncRNA_intronic
CAediting_1142890	chr16_87743313_-	ncRNA_intronic
CAediting_1142891	chr16_87743354_-	ncRNA_intronic
CAediting_1142892	chr16_87743367_-	ncRNA_intronic
CAediting_1142893	chr16_87743551_-	ncRNA_intronic
CAediting_1142894	chr16_87743559_-	ncRNA_intronic
CAediting_1142895	chr16_87743616_-	ncRNA_intronic
CAediting_1142896	chr16_87744523_-	ncRNA_intronic
CAediting_1142897	chr16_87744542_-	ncRNA_intronic
CAediting_1142898	chr16_87746007_-	ncRNA_intronic
CAediting_1142899	chr16_87746017_-	ncRNA_intronic
CAediting_1142900	chr16_87746046_-	ncRNA_intronic
CAediting_1142901	chr16_87746148_-	ncRNA_intronic
CAediting_1142902	chr16_87746158_-	ncRNA_intronic
CAediting_1142903	chr16_87746161_-	ncRNA_intronic
CAediting_1142904	chr16_87746187_-	ncRNA_intronic
CAediting_1142905	chr16_87746188_-	ncRNA_intronic
CAediting_1142906	chr16_87746236_-	ncRNA_intronic
CAediting_1142907	chr16_87756881_-	ncRNA_intronic
CAediting_1142908	chr16_87756936_-	ncRNA_intronic
CAediting_1142909	chr16_87756983_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1142705	chr16_87699431_-	SINE	Alu	AluSx1
CAediting_1142706	chr16_87699449_-	SINE	Alu	AluSx1
CAediting_1142707	chr16_87699451_-	SINE	Alu	AluSx1
CAediting_1142708	chr16_87699472_-	SINE	Alu	AluSx1
CAediting_1142709	chr16_87699577_-	SINE	Alu	AluSx1
CAediting_1142710	chr16_87699616_-	SINE	Alu	AluSx1
CAediting_1142711	chr16_87699691_-	SINE	Alu	AluSx1
CAediting_1142712	chr16_87727941_-	SINE	Alu	AluSz6
CAediting_1142713	chr16_87727969_-	SINE	Alu	AluSz6
CAediting_1142714	chr16_87728001_-	SINE	Alu	AluSz6
CAediting_1142715	chr16_87728003_-	SINE	Alu	AluSz6
CAediting_1142716	chr16_87728039_-	SINE	Alu	AluSz6
CAediting_1142717	chr16_87728065_-	SINE	Alu	AluSz6
CAediting_1142718	chr16_87728075_-	SINE	Alu	AluSz6
CAediting_1142719	chr16_87728087_-	SINE	Alu	AluSz6
CAediting_1142720	chr16_87728103_-	SINE	Alu	AluSz6
CAediting_1142721	chr16_87728104_-	SINE	Alu	AluSz6
CAediting_1142722	chr16_87728105_-	SINE	Alu	AluSz6
CAediting_1142723	chr16_87728111_-	SINE	Alu	AluSz6
CAediting_1142724	chr16_87728135_-	SINE	Alu	AluSz6
CAediting_1142725	chr16_87728171_-	SINE	Alu	AluSz6
CAediting_1142726	chr16_87728737_-	SINE	Alu	AluSg
CAediting_1142727	chr16_87728787_-	SINE	Alu	AluSg
CAediting_1142728	chr16_87728799_-	SINE	Alu	AluSg
CAediting_1142729	chr16_87728816_-	SINE	Alu	AluSg
CAediting_1142730	chr16_87728830_-	SINE	Alu	AluSg
CAediting_1142731	chr16_87728831_-	SINE	Alu	AluSg
CAediting_1142732	chr16_87728835_-	SINE	Alu	AluSg
CAediting_1142733	chr16_87728885_-	SINE	Alu	AluSz6
CAediting_1142734	chr16_87728935_-	SINE	Alu	AluSz6
CAediting_1142735	chr16_87728956_-	SINE	Alu	AluSz6
CAediting_1142736	chr16_87728959_-	SINE	Alu	AluSz6
CAediting_1142737	chr16_87729009_-	SINE	Alu	AluSz6
CAediting_1142738	chr16_87729049_-	SINE	Alu	AluSz6
CAediting_1142739	chr16_87730050_-	SINE	Alu	AluSx1
CAediting_1142740	chr16_87730131_-	SINE	Alu	AluSx1
CAediting_1142741	chr16_87730153_-	SINE	Alu	AluSx1
CAediting_1142742	chr16_87730180_-	SINE	Alu	AluSx1
CAediting_1142743	chr16_87731086_-	SINE	Alu	AluSz
CAediting_1142744	chr16_87731099_-	SINE	Alu	AluSz
CAediting_1142745	chr16_87731116_-	SINE	Alu	AluSz
CAediting_1142746	chr16_87731117_-	SINE	Alu	AluSz
CAediting_1142747	chr16_87731121_-	SINE	Alu	AluSz
CAediting_1142748	chr16_87731136_-	SINE	Alu	AluSz
CAediting_1142749	chr16_87731147_-	SINE	Alu	AluSz
CAediting_1142750	chr16_87731148_-	SINE	Alu	AluSz
CAediting_1142751	chr16_87731160_-	SINE	Alu	AluSz
CAediting_1142752	chr16_87731161_-	SINE	Alu	AluSz
CAediting_1142753	chr16_87731169_-	SINE	Alu	AluSz
CAediting_1142754	chr16_87731179_-	SINE	Alu	AluSz
CAediting_1142755	chr16_87731185_-	SINE	Alu	AluSz
CAediting_1142756	chr16_87731188_-	SINE	Alu	AluSz
CAediting_1142757	chr16_87731192_-	SINE	Alu	AluSz
CAediting_1142758	chr16_87731196_-	SINE	Alu	AluSz
CAediting_1142759	chr16_87731201_-	SINE	Alu	AluSz
CAediting_1142760	chr16_87731202_-	SINE	Alu	AluSz
CAediting_1142761	chr16_87731210_-	SINE	Alu	AluSz
CAediting_1142762	chr16_87731224_-	SINE	Alu	AluSz
CAediting_1142763	chr16_87731228_-	SINE	Alu	AluSz
CAediting_1142764	chr16_87731231_-	SINE	Alu	AluSz
CAediting_1142765	chr16_87731233_-	SINE	Alu	AluSz
CAediting_1142766	chr16_87731235_-	SINE	Alu	AluSz
CAediting_1142767	chr16_87731238_-	SINE	Alu	AluSz
CAediting_1142768	chr16_87731240_-	SINE	Alu	AluSz
CAediting_1142769	chr16_87731258_-	SINE	Alu	AluSz
CAediting_1142770	chr16_87731259_-	SINE	Alu	AluSz
CAediting_1142771	chr16_87731260_-	SINE	Alu	AluSz
CAediting_1142772	chr16_87731268_-	SINE	Alu	AluSz
CAediting_1142773	chr16_87731269_-	SINE	Alu	AluSz
CAediting_1142774	chr16_87731278_-	SINE	Alu	AluSz
CAediting_1142775	chr16_87731281_-	SINE	Alu	AluSz
CAediting_1142776	chr16_87731292_-	SINE	Alu	AluSz
CAediting_1142777	chr16_87731297_-	SINE	Alu	AluSz
CAediting_1142778	chr16_87731318_-	SINE	Alu	AluSz
CAediting_1142779	chr16_87731336_-	SINE	Alu	AluSz
CAediting_1142780	chr16_87731339_-	SINE	Alu	AluSz
CAediting_1142781	chr16_87731344_-	SINE	Alu	AluSz
CAediting_1142782	chr16_87731345_-	SINE	Alu	AluSz
CAediting_1142783	chr16_87731361_-	SINE	Alu	AluSz
CAediting_1142784	chr16_87731363_-	SINE	Alu	AluSz
CAediting_1142785	chr16_87731380_-	LINE	L1	L1ME1
CAediting_1142786	chr16_87732130_-	SINE	Alu	AluSq
CAediting_1142787	chr16_87732161_-	SINE	Alu	AluSq
CAediting_1142788	chr16_87732163_-	SINE	Alu	AluSq
CAediting_1142789	chr16_87732168_-	SINE	Alu	AluSq
CAediting_1142790	chr16_87732172_-	SINE	Alu	AluSq
CAediting_1142791	chr16_87732192_-	SINE	Alu	AluSq
CAediting_1142792	chr16_87732198_-	SINE	Alu	AluSq
CAediting_1142793	chr16_87732204_-	SINE	Alu	AluSq
CAediting_1142794	chr16_87732211_-	SINE	Alu	AluSq
CAediting_1142795	chr16_87732224_-	SINE	Alu	AluSq
CAediting_1142796	chr16_87732228_-	SINE	Alu	AluSq
CAediting_1142797	chr16_87732233_-	SINE	Alu	AluSq
CAediting_1142798	chr16_87732234_-	SINE	Alu	AluSq
CAediting_1142799	chr16_87732240_-	SINE	Alu	AluSq
CAediting_1142800	chr16_87732244_-	SINE	Alu	AluSq
CAediting_1142801	chr16_87732260_-	SINE	Alu	AluSq
CAediting_1142802	chr16_87732263_-	SINE	Alu	AluSq
CAediting_1142803	chr16_87732264_-	SINE	Alu	AluSq
CAediting_1142804	chr16_87732265_-	SINE	Alu	AluSq
CAediting_1142805	chr16_87732266_-	SINE	Alu	AluSq
CAediting_1142806	chr16_87732269_-	SINE	Alu	AluSq
CAediting_1142807	chr16_87732273_-	SINE	Alu	AluSq
CAediting_1142808	chr16_87732275_-	SINE	Alu	AluSq
CAediting_1142809	chr16_87732289_-	SINE	Alu	AluSq
CAediting_1142810	chr16_87732290_-	SINE	Alu	AluSq
CAediting_1142811	chr16_87732291_-	SINE	Alu	AluSq
CAediting_1142812	chr16_87732294_-	SINE	Alu	AluSq
CAediting_1142813	chr16_87732300_-	SINE	Alu	AluSq
CAediting_1142814	chr16_87732323_-	SINE	Alu	AluSq
CAediting_1142815	chr16_87732338_-	SINE	Alu	AluSq
CAediting_1142816	chr16_87732342_-	SINE	Alu	AluSq
CAediting_1142817	chr16_87732368_-	SINE	Alu	AluSq
CAediting_1142818	chr16_87732369_-	SINE	Alu	AluSq
CAediting_1142819	chr16_87732391_-	SINE	Alu	AluSq
CAediting_1142820	chr16_87734102_-	SINE	Alu	AluSg
CAediting_1142821	chr16_87734103_-	SINE	Alu	AluSg
CAediting_1142822	chr16_87734117_-	SINE	Alu	AluSg
CAediting_1142823	chr16_87734125_-	SINE	Alu	AluSg
CAediting_1142824	chr16_87734165_-	SINE	Alu	AluSg
CAediting_1142825	chr16_87734173_-	SINE	Alu	AluSg
CAediting_1142826	chr16_87734182_-	SINE	Alu	AluSg
CAediting_1142827	chr16_87734188_-	SINE	Alu	AluSg
CAediting_1142828	chr16_87734193_-	SINE	Alu	AluSg
CAediting_1142829	chr16_87734197_-	SINE	Alu	AluSg
CAediting_1142830	chr16_87734201_-	SINE	Alu	AluSg
CAediting_1142831	chr16_87734207_-	SINE	Alu	AluSg
CAediting_1142832	chr16_87734220_-	SINE	Alu	AluSg
CAediting_1142833	chr16_87734222_-	SINE	Alu	AluSg
CAediting_1142834	chr16_87734244_-	SINE	Alu	AluSg
CAediting_1142835	chr16_87734258_-	SINE	Alu	AluSg
CAediting_1142836	chr16_87734261_-	SINE	Alu	AluSg
CAediting_1142837	chr16_87734262_-	SINE	Alu	AluSg
CAediting_1142838	chr16_87734275_-	SINE	Alu	AluSg
CAediting_1142839	chr16_87734282_-	SINE	Alu	AluSg
CAediting_1142840	chr16_87734311_-	SINE	Alu	AluSg
CAediting_1142841	chr16_87736899_-	SINE	Alu	AluSq2
CAediting_1142842	chr16_87737003_-	SINE	Alu	AluSq2
CAediting_1142843	chr16_87737063_-	SINE	Alu	AluSq2
CAediting_1142844	chr16_87737068_-	SINE	Alu	AluSq2
CAediting_1142845	chr16_87737322_-	SINE	Alu	AluSz
CAediting_1142846	chr16_87737383_-	SINE	Alu	AluSz
CAediting_1142847	chr16_87737396_-	SINE	Alu	AluSz
CAediting_1142848	chr16_87737422_-	SINE	Alu	AluSz
CAediting_1142849	chr16_87737464_-	SINE	Alu	AluSz
CAediting_1142850	chr16_87737476_-	SINE	Alu	AluSz
CAediting_1142851	chr16_87737479_-	SINE	Alu	AluSz
CAediting_1142852	chr16_87737480_-	SINE	Alu	AluSz
CAediting_1142853	chr16_87737488_-	SINE	Alu	AluSz
CAediting_1142854	chr16_87737505_-	SINE	Alu	AluSz
CAediting_1142855	chr16_87737525_-	SINE	Alu	AluSz
CAediting_1142856	chr16_87737526_-	SINE	Alu	AluSz
CAediting_1142857	chr16_87737531_-	SINE	Alu	AluSz
CAediting_1142858	chr16_87737541_-	SINE	Alu	AluSz
CAediting_1142859	chr16_87737655_-	SINE	Alu	AluSx1
CAediting_1142860	chr16_87737660_-	SINE	Alu	AluSx1
CAediting_1142861	chr16_87737664_-	SINE	Alu	AluSx1
CAediting_1142862	chr16_87737667_-	SINE	Alu	AluSx1
CAediting_1142863	chr16_87737693_-	SINE	Alu	AluSx1
CAediting_1142864	chr16_87737703_-	SINE	Alu	AluSx1
CAediting_1142865	chr16_87737725_-	SINE	Alu	AluSx1
CAediting_1142866	chr16_87737726_-	SINE	Alu	AluSx1
CAediting_1142867	chr16_87737732_-	SINE	Alu	AluSx1
CAediting_1142868	chr16_87737748_-	SINE	Alu	AluSx1
CAediting_1142869	chr16_87737752_-	SINE	Alu	AluSx1
CAediting_1142870	chr16_87737763_-	SINE	Alu	AluSx1
CAediting_1142871	chr16_87737765_-	SINE	Alu	AluSx1
CAediting_1142872	chr16_87737792_-	SINE	Alu	AluSx1
CAediting_1142873	chr16_87737794_-	SINE	Alu	AluSx1
CAediting_1142874	chr16_87737809_-	SINE	Alu	AluSx1
CAediting_1142875	chr16_87737818_-	SINE	Alu	AluSx1
CAediting_1142876	chr16_87737828_-	SINE	Alu	AluSx1
CAediting_1142877	chr16_87737837_-	SINE	Alu	AluSx1
CAediting_1142878	chr16_87737863_-	SINE	Alu	AluSx1
CAediting_1142879	chr16_87737864_-	SINE	Alu	AluSx1
CAediting_1142880	chr16_87737870_-	SINE	Alu	AluSx1
CAediting_1142881	chr16_87737880_-	SINE	Alu	AluSx1
CAediting_1142882	chr16_87743178_-	SINE	Alu	AluJo
CAediting_1142883	chr16_87743238_-	SINE	Alu	AluJo
CAediting_1142884	chr16_87743243_-	SINE	Alu	AluJo
CAediting_1142885	chr16_87743244_-	SINE	Alu	AluJo
CAediting_1142886	chr16_87743283_-	SINE	Alu	AluJo
CAediting_1142887	chr16_87743290_-	SINE	Alu	AluJo
CAediting_1142888	chr16_87743298_-	SINE	Alu	AluJo
CAediting_1142889	chr16_87743299_-	SINE	Alu	AluJo
CAediting_1142890	chr16_87743313_-	SINE	Alu	AluJo
CAediting_1142891	chr16_87743354_-	SINE	Alu	AluJo
CAediting_1142892	chr16_87743367_-	SINE	Alu	AluJo
CAediting_1142893	chr16_87743551_-	SINE	Alu	AluY
CAediting_1142894	chr16_87743559_-	SINE	Alu	AluY
CAediting_1142895	chr16_87743616_-	SINE	Alu	AluY
CAediting_1142896	chr16_87744523_-	SINE	Alu	AluSx1
CAediting_1142897	chr16_87744542_-	SINE	Alu	AluSx1
CAediting_1142898	chr16_87746007_-	SINE	Alu	AluJr
CAediting_1142899	chr16_87746017_-	SINE	Alu	AluJr
CAediting_1142900	chr16_87746046_-	SINE	Alu	AluJr
CAediting_1142901	chr16_87746148_-	SINE	Alu	AluJr
CAediting_1142902	chr16_87746158_-	SINE	Alu	AluJr
CAediting_1142903	chr16_87746161_-	SINE	Alu	AluJr
CAediting_1142904	chr16_87746187_-	SINE	Alu	AluJr
CAediting_1142905	chr16_87746188_-	SINE	Alu	AluJr
CAediting_1142906	chr16_87746236_-	SINE	Alu	AluJr
CAediting_1142907	chr16_87756881_-	SINE	Alu	AluSq2
CAediting_1142908	chr16_87756936_-	SINE	Alu	AluSq2
CAediting_1142909	chr16_87756983_-	SINE	Alu	AluSq2

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RNA A-to-I editing events in the alternative splicing sites for KLHDC4

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000104731.12.KLHDC4.

Correlation between RNA A-to-I editing and PSI for ENSG00000104731.12.KLHDC4.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for KLHDC4

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ESCA.CAediting_1142798.ENSG00000104731.KLHDC4.png
Soverview

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Protein coding region RNA A-to-I editings for KLHDC4

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for KLHDC4

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1142706	chr16_87699449_-	ENSG00000104731.12	ENST00000446344	hsa-miR-3189-3p	87699448	87699454	7mer-m8	87699447	87699470	145.00	-23.27
CAediting_1142706	chr16_87699449_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6813-3p	87699447	87699453	7mer-m8	87699446	87699466	140.00	-12.88
CAediting_1142706	chr16_87699449_-	ENSG00000104731.12	ENST00000567298	hsa-miR-3189-3p	87699448	87699454	7mer-m8	87699447	87699470	145.00	-23.27
CAediting_1142706	chr16_87699449_-	ENSG00000104731.12	ENST00000567298	hsa-miR-6813-3p	87699447	87699453	7mer-m8	87699446	87699466	140.00	-12.88
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6771-5p	87699449	87699456	8mer-1a	87699449	87699468	161.00	-31.74
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000567298	hsa-miR-6771-5p	87699449	87699456	8mer-1a	87699449	87699468	161.00	-31.74
CAediting_1142708	chr16_87699472_-	ENSG00000104731.12	ENST00000446344	hsa-miR-4776-5p	87699468	87699474	7mer-m8	87699467	87699490	151.00	-27.19
CAediting_1142708	chr16_87699472_-	ENSG00000104731.12	ENST00000446344	hsa-miR-4776-5p	87699468	87699474	7mer-m8	87699467	87699490	151.00	-27.19
CAediting_1142708	chr16_87699472_-	ENSG00000104731.12	ENST00000446344	hsa-miR-4800-5p	87699467	87699473	7mer-m8	87699466	87699491	147.00	-24.71
CAediting_1142708	chr16_87699472_-	ENSG00000104731.12	ENST00000567298	hsa-miR-4776-5p	87699468	87699474	7mer-m8	87699467	87699490	151.00	-27.19
CAediting_1142708	chr16_87699472_-	ENSG00000104731.12	ENST00000567298	hsa-miR-4776-5p	87699468	87699474	7mer-m8	87699467	87699490	151.00	-27.19
CAediting_1142708	chr16_87699472_-	ENSG00000104731.12	ENST00000567298	hsa-miR-4800-5p	87699467	87699473	7mer-m8	87699466	87699491	147.00	-24.71
CAediting_1142710	chr16_87699616_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6078	87699612	87699619	8mer-1a	87699612	87699630	149.00	-20.85
CAediting_1142710	chr16_87699616_-	ENSG00000104731.12	ENST00000567298	hsa-miR-6078	87699612	87699619	8mer-1a	87699612	87699630	149.00	-20.85
CAediting_1142711	chr16_87699691_-	ENSG00000104731.12	ENST00000446344	hsa-miR-340-3p	87699689	87699696	8mer-1a	87699689	87699710	156.00	-21.41
CAediting_1142711	chr16_87699691_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6827-3p	87699689	87699696	8mer-1a	87699689	87699709	140.00	-14.67
CAediting_1142711	chr16_87699691_-	ENSG00000104731.12	ENST00000567298	hsa-miR-340-3p	87699689	87699696	8mer-1a	87699689	87699710	156.00	-21.41
CAediting_1142711	chr16_87699691_-	ENSG00000104731.12	ENST00000567298	hsa-miR-6827-3p	87699689	87699696	8mer-1a	87699689	87699709	140.00	-14.67

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000446344	hsa-miR-30b-3p	87699450	87699457	8mer-1a	87699450	87699471	147	-18
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000446344	hsa-miR-3689a-3p	87699450	87699457	8mer-1a	87699450	87699471	141	-19.53
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000446344	hsa-miR-3689b-3p	87699450	87699457	8mer-1a	87699450	87699471	141	-19.58
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000446344	hsa-miR-3689c	87699450	87699457	8mer-1a	87699450	87699471	141	-19.58
CAediting_1142705	chr16_87699431_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6514-3p	87699431	87699437	7mer-m8	87699430	87699450	155	-17.54
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6779-5p	87699450	87699457	8mer-1a	87699450	87699473	143	-22.97
CAediting_1142705	chr16_87699431_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6847-3p	87699426	87699432	7mer-m8	87699425	87699447	153	-22.19
CAediting_1142711	chr16_87699691_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6888-3p	87699689	87699695	7mer-m8	87699688	87699708	151	-14.32
CAediting_1142708	chr16_87699472_-	ENSG00000104731.12	ENST00000446344	hsa-miR-8056	87699467	87699472	6mer	87699466	87699485	142	-18.58
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000446344	hsa-miR-887-5p	87699449	87699456	8mer-1a	87699449	87699470	148	-16.93
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000567298	hsa-miR-30b-3p	87699450	87699457	8mer-1a	87699450	87699471	147	-18
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000567298	hsa-miR-3689a-3p	87699450	87699457	8mer-1a	87699450	87699471	141	-19.53
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000567298	hsa-miR-3689b-3p	87699450	87699457	8mer-1a	87699450	87699471	141	-19.58
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000567298	hsa-miR-3689c	87699450	87699457	8mer-1a	87699450	87699471	141	-19.58
CAediting_1142705	chr16_87699431_-	ENSG00000104731.12	ENST00000567298	hsa-miR-6514-3p	87699431	87699437	7mer-m8	87699430	87699450	155	-17.54
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000567298	hsa-miR-6779-5p	87699450	87699457	8mer-1a	87699450	87699473	143	-22.97
CAediting_1142705	chr16_87699431_-	ENSG00000104731.12	ENST00000567298	hsa-miR-6847-3p	87699426	87699432	7mer-m8	87699425	87699447	153	-22.19
CAediting_1142711	chr16_87699691_-	ENSG00000104731.12	ENST00000567298	hsa-miR-6888-3p	87699689	87699695	7mer-m8	87699688	87699708	151	-14.32
CAediting_1142708	chr16_87699472_-	ENSG00000104731.12	ENST00000567298	hsa-miR-8056	87699467	87699472	6mer	87699466	87699485	142	-18.58
CAediting_1142707	chr16_87699451_-	ENSG00000104731.12	ENST00000567298	hsa-miR-887-5p	87699449	87699456	8mer-1a	87699449	87699470	148	-16.93

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87700549	87700555	7mer-m8	87700535	87700556	152	-15.79
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87700549	87700555	7mer-m8	87700548	87700569	140	-17.08
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87700536	87700542	7mer-m8	87700535	87700556	152	-15.79
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87700490	87700496	7mer-m8	87700489	87700510	140	-14.32
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87700469	87700475	7mer-m8	87700468	87700489	140	-14.6
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87698625	87698631	7mer-m8	87698624	87698643	144	-15.86
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87698625	87698631	7mer-m8	87698617	87698638	140	-15.08
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87698618	87698624	7mer-m8	87698617	87698638	140	-15.08
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87700791	87700797	7mer-m8	87700790	87700810	142	-15.06
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87700664	87700669	6mer	87700656	87700677	140	-14.32
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87700657	87700663	7mer-m8	87700642	87700663	143	-15.64
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87700657	87700663	7mer-m8	87700656	87700677	140	-14.32
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000446344	hsa-miR-605-3p	87700643	87700649	7mer-m8	87700642	87700663	143	-15.64
CAediting_980496	chr14_31014685_-	ENSG00000104731.12	ENST00000446344	hsa-miR-624-3p	87700614	87700620	7mer-m8	87700613	87700633	143	-13.24
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000567298	hsa-miR-605-3p	87698625	87698631	7mer-m8	87698624	87698643	144	-15.86
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000567298	hsa-miR-605-3p	87698625	87698631	7mer-m8	87698617	87698638	140	-15.08
CAediting_748296	chr10_51299626_+	ENSG00000104731.12	ENST00000567298	hsa-miR-605-3p	87698618	87698624	7mer-m8	87698617	87698638	140	-15.08
CAediting_688081	chr9_63819627_+	ENSG00000104731.12	ENST00000563845	hsa-miR-4477b	87765133	87765139	7mer-m8	87765132	87765152	159	-14.32
CAediting_688081	chr9_63819627_+	ENSG00000104731.12	ENST00000566561	hsa-miR-4477b	87765133	87765139	7mer-m8	87765132	87765152	159	-14.32
CAediting_1054808	chr15_66496985_-	ENSG00000104731.12	ENST00000446344	hsa-miR-4512	87699150	87699156	7mer-m8	87699149	87699170	145	-26.52
CAediting_1229415	chr17_67471547_+	ENSG00000104731.12	ENST00000446344	hsa-miR-548aa	87698631	87698637	7mer-m8	87698630	87698652	159	-13.39
CAediting_1229415	chr17_67471547_+	ENSG00000104731.12	ENST00000446344	hsa-miR-548aa	87701077	87701083	7mer-m8	87701076	87701101	156	-17.38
CAediting_1368054	chr19_46709310_-	ENSG00000104731.12	ENST00000446344	hsa-miR-320e	87699126	87699132	7mer-m8	87699125	87699141	145	-20.43
CAediting_86358	chr1_109598906_+	ENSG00000104731.12	ENST00000446344	hsa-miR-197-5p	87700857	87700863	7mer-m8	87700856	87700879	168	-30.78
CAediting_580943	chr7_100356700_+	ENSG00000104731.12	ENST00000446344	hsa-miR-6840-3p	87699988	87699994	7mer-m8	87699987	87700009	149	-21.77
CAediting_580943	chr7_100356700_+	ENSG00000104731.12	ENST00000446344	hsa-miR-6840-3p	87699794	87699800	7mer-m8	87699793	87699815	155	-25.43
CAediting_580943	chr7_100356700_+	ENSG00000104731.12	ENST00000446344	hsa-miR-6840-3p	87699621	87699627	7mer-m8	87699620	87699641	140	-25.13
CAediting_604450	chr7_133034877_-	ENSG00000104731.12	ENST00000446344	hsa-miR-3654	87700008	87700014	7mer-m8	87700007	87700025	142	-19.01
CAediting_573001	chr7_92204086_-	ENSG00000104731.12	ENST00000446344	hsa-miR-1285-5p	87699865	87699871	7mer-m8	87699864	87699884	140	-15.05
CAediting_77128	chr1_85133844_+	ENSG00000104731.12	ENST00000567298	hsa-miR-4423-3p	87703411	87703417	7mer-m8	87703410	87703430	140	-12.35
CAediting_1054808	chr15_66496985_-	ENSG00000104731.12	ENST00000567298	hsa-miR-4512	87699150	87699156	7mer-m8	87699149	87699170	145	-26.52
CAediting_1229415	chr17_67471547_+	ENSG00000104731.12	ENST00000567298	hsa-miR-548aa	87698631	87698637	7mer-m8	87698630	87698652	159	-13.39
CAediting_1368054	chr19_46709310_-	ENSG00000104731.12	ENST00000567298	hsa-miR-320e	87699126	87699132	7mer-m8	87699125	87699141	145	-20.43
CAediting_580943	chr7_100356700_+	ENSG00000104731.12	ENST00000567298	hsa-miR-6840-3p	87699988	87699994	7mer-m8	87699987	87700009	149	-21.77
CAediting_580943	chr7_100356700_+	ENSG00000104731.12	ENST00000567298	hsa-miR-6840-3p	87699794	87699800	7mer-m8	87699793	87699815	155	-25.43
CAediting_580943	chr7_100356700_+	ENSG00000104731.12	ENST00000567298	hsa-miR-6840-3p	87699621	87699627	7mer-m8	87699620	87699641	140	-25.13
CAediting_604450	chr7_133034877_-	ENSG00000104731.12	ENST00000567298	hsa-miR-3654	87700008	87700014	7mer-m8	87700007	87700025	142	-19.01
CAediting_573001	chr7_92204086_-	ENSG00000104731.12	ENST00000567298	hsa-miR-1285-5p	87699865	87699871	7mer-m8	87699864	87699884	140	-15.05
CAediting_77128	chr1_85133844_+	ENSG00000104731.12	ENST00000353170	hsa-miR-4423-3p	87708036	87708042	7mer-m8	87708035	87708055	140	-14.64
CAediting_77128	chr1_85133844_+	ENSG00000104731.12	ENST00000347925	hsa-miR-4423-3p	87708036	87708042	7mer-m8	87708035	87708055	140	-14.64
CAediting_1229415	chr17_67471547_+	ENSG00000104731.12	ENST00000562155	hsa-miR-548aa	87711382	87711388	7mer-m8	87711381	87711405	142	-10.72
CAediting_414656	chr5_72878640_+	ENSG00000104731.12	ENST00000562155	hsa-miR-4804-3p	87711402	87711408	7mer-m8	87711401	87711421	147	-19.18
CAediting_77128	chr1_85133844_+	ENSG00000104731.12	ENST00000562155	hsa-miR-4423-3p	87708036	87708042	7mer-m8	87708035	87708055	140	-14.64
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700626	87700632	7mer-m8	87700625	87700643	156	-27.48
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700487	87700493	7mer-m8	87700486	87700502	150	-27.21
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700466	87700472	7mer-m8	87700465	87700482	147	-26.67
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87699590	87699597	8mer-1a	87699590	87699609	152	-25.5
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700866	87700872	7mer-m8	87700865	87700881	146	-26.47
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700845	87700851	7mer-m8	87700844	87700860	146	-26.48
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700824	87700830	7mer-m8	87700823	87700839	146	-26.47
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700803	87700809	7mer-m8	87700802	87700825	144	-28.05
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700781	87700787	7mer-m8	87700780	87700796	146	-26.47
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700739	87700745	7mer-m8	87700738	87700756	144	-31.12
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700717	87700723	7mer-m8	87700716	87700732	146	-26.47
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700696	87700702	7mer-m8	87700695	87700711	146	-26.47
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700675	87700681	7mer-m8	87700674	87700690	146	-26.47
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87700654	87700660	7mer-m8	87700653	87700669	150	-27.2
CAediting_1524209	chrX_134546392_-	ENSG00000104731.12	ENST00000567298	hsa-miR-503-5p	87703404	87703410	7mer-m8	87703403	87703427	154	-22.7
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000567298	hsa-miR-6891-5p	87699590	87699597	8mer-1a	87699590	87699609	152	-25.5

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1306323	chr19_13836462_-	ENSG00000104731.12	ENST00000446344	hsa-miR-27a-3p	87700098	87700104	7mer-m8	87700097	87700117	140	-11.88
CAediting_1368054	chr19_46709310_-	ENSG00000104731.12	ENST00000446344	hsa-miR-320e	87700891	87700897	7mer-m8	87700890	87700907	144	-16.96
CAediting_1524209	chrX_134546392_-	ENSG00000104731.12	ENST00000446344	hsa-miR-503-5p	87699003	87699009	7mer-m8	87699002	87699024	144	-22.15
CAediting_1524209	chrX_134546392_-	ENSG00000104731.12	ENST00000446344	hsa-miR-503-5p	87698612	87698618	7mer-m8	87698611	87698633	155	-25.19
CAediting_1229413	chr17_67471544_+	ENSG00000104731.12	ENST00000446344	hsa-miR-548aa	87698580	87698586	7mer-m8	87698579	87698603	140	-10.92
CAediting_1229414	chr17_67471546_+	ENSG00000104731.12	ENST00000446344	hsa-miR-548aa	87698580	87698586	7mer-m8	87698579	87698603	140	-10.92
CAediting_1229415	chr17_67471547_+	ENSG00000104731.12	ENST00000446344	hsa-miR-548aa	87698580	87698586	7mer-m8	87698579	87698603	140	-10.92
CAediting_524911	chr7_5495852_-	ENSG00000104731.12	ENST00000446344	hsa-miR-589-3p	87701167	87701173	7mer-m8	87701166	87701189	154	-18.53
CAediting_580943	chr7_100356700_+	ENSG00000104731.12	ENST00000446344	hsa-miR-6840-3p	87700429	87700435	7mer-m8	87700428	87700449	146	-25.17
CAediting_580943	chr7_100356700_+	ENSG00000104731.12	ENST00000446344	hsa-miR-6840-3p	87699097	87699103	7mer-m8	87699096	87699117	145	-20.22
CAediting_468389	chr6_31355314_-	ENSG00000104731.12	ENST00000446344	hsa-miR-6891-5p	87701014	87701020	7mer-m8	87701013	87701031	146	-19.31
CAediting_1306323	chr19_13836462_-	ENSG00000104731.12	ENST00000567298	hsa-miR-27a-3p	87700098	87700104	7mer-m8	87700097	87700117	140	-11.88
CAediting_1229413	chr17_67471544_+	ENSG00000104731.12	ENST00000567298	hsa-miR-548aa	87698580	87698586	7mer-m8	87698579	87698603	140	-10.92
CAediting_1229414	chr17_67471546_+	ENSG00000104731.12	ENST00000567298	hsa-miR-548aa	87698580	87698586	7mer-m8	87698579	87698603	140	-10.92
CAediting_1229415	chr17_67471547_+	ENSG00000104731.12	ENST00000567298	hsa-miR-548aa	87698580	87698586	7mer-m8	87698579	87698603	140	-10.92
CAediting_580943	chr7_100356700_+	ENSG00000104731.12	ENST00000567298	hsa-miR-6840-3p	87699097	87699103	7mer-m8	87699096	87699117	145	-20.22

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for KLHDC4

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for KLHDC4

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for KLHDC4

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for KLHDC4

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for KLHDC4

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for KLHDC4

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene