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Editing gene: ZNHIT6 (CAeditome ID:54680)

Gene summary for ZNHIT6

Gene summary

Gene information	Gene symbol	ZNHIT6
	Gene ID	54680
	Gene name	zinc finger HIT-type containing 6
	Synonyms	BCD1\|C1orf181\|NY-BR-75
	Cytomap	1p22.3
	Type of gene	protein-coding
	Description	box C/D snoRNA protein 1box C/D snoRNA essential 1 homologserologically defined breast cancer antigen NY-BR-75zinc finger HIT domain-containing protein 6zinc finger, HIT type 6
	Modification date	20210518
	UniProtAcc	Q9NWK9
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ZNHIT6	GO:0070761	Box C/D snoRNA protein 1	17636026

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RNA A-to-I events for ZNHIT6

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000117174.9

RNA A-to-I editing events in Cancer.

CAediting_77418(85650915, -), CAediting_77419(85651266, -), CAediting_77420(85651346, -), CAediting_77421(85651358, -), CAediting_77422(85651362, -), CAediting_77423(85651398, -), CAediting_77424(85651402, -), CAediting_77425(85651406, -), CAediting_77426(85651407, -), CAediting_77427(85651408, -), CAediting_77428(85651442, -), CAediting_77429(85651465, -), CAediting_77430(85651470, -), CAediting_77431(85651471, -), CAediting_77432(85651473, -), CAediting_77433(85651486, -), CAediting_77434(85651500, -), CAediting_77435(85651503, -), CAediting_77436(85651508, -), CAediting_77437(85651509, -), CAediting_77438(85651515, -), CAediting_77439(85651517, -), CAediting_77440(85651525, -), CAediting_77441(85651527, -), CAediting_77442(85651531, -), CAediting_77443(85653522, -), CAediting_77444(85653523, -), CAediting_77445(85653531, -), CAediting_77446(85653536, -), CAediting_77447(85653544, -), CAediting_77448(85653545, -), CAediting_77449(85653548, -), CAediting_77450(85653563, -), CAediting_77451(85653594, -), CAediting_77452(85653596, -), CAediting_77453(85653600, -), CAediting_77454(85653627, -), CAediting_77455(85653636, -), CAediting_77456(85653641, -), CAediting_77457(85653644, -), CAediting_77458(85653712, -), CAediting_77459(85658393, -), CAediting_77460(85658435, -), CAediting_77461(85658472, -), CAediting_77462(85658497, -), CAediting_77463(85658503, -), CAediting_77464(85658615, -), CAediting_77465(85658747, -), CAediting_77466(85658749, -), CAediting_77467(85659453, -), CAediting_77468(85659511, -), CAediting_77469(85659521, -), CAediting_77470(85664908, -), CAediting_77471(85664917, -), CAediting_77472(85664920, -), CAediting_77473(85665375, -), CAediting_77474(85671455, -), CAediting_77475(85671456, -), CAediting_77476(85679683, -), CAediting_77477(85679717, -), CAediting_77478(85679722, -), CAediting_77479(85679723, -), CAediting_77480(85679805, -), CAediting_77481(85679852, -), CAediting_77482(85679946, -), CAediting_77483(85679960, -), CAediting_77484(85680010, -), CAediting_77485(85680033, -), CAediting_77486(85680084, -), CAediting_77487(85680110, -), CAediting_77488(85682136, -), CAediting_77489(85682150, -), CAediting_77490(85682156, -), CAediting_77491(85682225, -), CAediting_77492(85686090, -), CAediting_77493(85686100, -), CAediting_77494(85686126, -), CAediting_77495(85686162, -), CAediting_77496(85686240, -), CAediting_77497(85694594, -), CAediting_77498(85694731, -), CAediting_77499(85694732, -), CAediting_77500(85694733, -), CAediting_77501(85695019, -), CAediting_77502(85695081, -), CAediting_77503(85695221, -), CAediting_77504(85695262, -), CAediting_77505(85697182, -),

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RNA editing positional annotations for ZNHIT6 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_77418	chr1_85650915_-	UTR3
CAediting_77419	chr1_85651266_-	UTR3
CAediting_77420	chr1_85651346_-	UTR3
CAediting_77421	chr1_85651358_-	UTR3
CAediting_77422	chr1_85651362_-	UTR3
CAediting_77423	chr1_85651398_-	UTR3
CAediting_77424	chr1_85651402_-	UTR3
CAediting_77425	chr1_85651406_-	UTR3
CAediting_77426	chr1_85651407_-	UTR3
CAediting_77427	chr1_85651408_-	UTR3
CAediting_77428	chr1_85651442_-	UTR3
CAediting_77429	chr1_85651465_-	UTR3
CAediting_77430	chr1_85651470_-	UTR3
CAediting_77431	chr1_85651471_-	UTR3
CAediting_77432	chr1_85651473_-	UTR3
CAediting_77433	chr1_85651486_-	UTR3
CAediting_77434	chr1_85651500_-	UTR3
CAediting_77435	chr1_85651503_-	UTR3
CAediting_77436	chr1_85651508_-	UTR3
CAediting_77437	chr1_85651509_-	UTR3
CAediting_77438	chr1_85651515_-	UTR3
CAediting_77439	chr1_85651517_-	UTR3
CAediting_77440	chr1_85651525_-	UTR3
CAediting_77441	chr1_85651527_-	UTR3
CAediting_77442	chr1_85651531_-	UTR3
CAediting_77443	chr1_85653522_-	UTR3
CAediting_77444	chr1_85653523_-	UTR3
CAediting_77445	chr1_85653531_-	UTR3
CAediting_77446	chr1_85653536_-	UTR3
CAediting_77447	chr1_85653544_-	UTR3
CAediting_77448	chr1_85653545_-	UTR3
CAediting_77449	chr1_85653548_-	UTR3
CAediting_77450	chr1_85653563_-	UTR3
CAediting_77451	chr1_85653594_-	UTR3
CAediting_77452	chr1_85653596_-	UTR3
CAediting_77453	chr1_85653600_-	UTR3
CAediting_77454	chr1_85653627_-	UTR3
CAediting_77455	chr1_85653636_-	UTR3
CAediting_77456	chr1_85653641_-	UTR3
CAediting_77457	chr1_85653644_-	UTR3
CAediting_77458	chr1_85653712_-	UTR3
CAediting_77459	chr1_85658393_-	intronic
CAediting_77460	chr1_85658435_-	intronic
CAediting_77461	chr1_85658472_-	intronic
CAediting_77462	chr1_85658497_-	intronic
CAediting_77463	chr1_85658503_-	intronic
CAediting_77464	chr1_85658615_-	intronic
CAediting_77465	chr1_85658747_-	intronic
CAediting_77466	chr1_85658749_-	intronic
CAediting_77467	chr1_85659453_-	intronic
CAediting_77468	chr1_85659511_-	intronic
CAediting_77469	chr1_85659521_-	intronic
CAediting_77470	chr1_85664908_-	intronic
CAediting_77471	chr1_85664917_-	intronic
CAediting_77472	chr1_85664920_-	intronic
CAediting_77473	chr1_85665375_-	intronic
CAediting_77474	chr1_85671455_-	intronic
CAediting_77475	chr1_85671456_-	intronic
CAediting_77476	chr1_85679683_-	intronic
CAediting_77477	chr1_85679717_-	intronic
CAediting_77478	chr1_85679722_-	intronic
CAediting_77479	chr1_85679723_-	intronic
CAediting_77480	chr1_85679805_-	intronic
CAediting_77481	chr1_85679852_-	intronic
CAediting_77482	chr1_85679946_-	intronic
CAediting_77483	chr1_85679960_-	intronic
CAediting_77484	chr1_85680010_-	intronic
CAediting_77485	chr1_85680033_-	intronic
CAediting_77486	chr1_85680084_-	intronic
CAediting_77487	chr1_85680110_-	intronic
CAediting_77488	chr1_85682136_-	intronic
CAediting_77489	chr1_85682150_-	intronic
CAediting_77490	chr1_85682156_-	intronic
CAediting_77491	chr1_85682225_-	intronic
CAediting_77492	chr1_85686090_-	intronic
CAediting_77493	chr1_85686100_-	intronic
CAediting_77494	chr1_85686126_-	intronic
CAediting_77495	chr1_85686162_-	intronic
CAediting_77496	chr1_85686240_-	intronic
CAediting_77497	chr1_85694594_-	intronic
CAediting_77498	chr1_85694731_-	intronic
CAediting_77499	chr1_85694732_-	intronic
CAediting_77500	chr1_85694733_-	intronic
CAediting_77501	chr1_85695019_-	intronic
CAediting_77502	chr1_85695081_-	intronic
CAediting_77503	chr1_85695221_-	intronic
CAediting_77504	chr1_85695262_-	intronic
CAediting_77505	chr1_85697182_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_77418	chr1_85650915_-	LTR	ERVL-MaLR	MSTA1
CAediting_77419	chr1_85651266_-	SINE	Alu	AluSz6
CAediting_77420	chr1_85651346_-	SINE	Alu	AluSz6
CAediting_77421	chr1_85651358_-	SINE	Alu	AluSz6
CAediting_77422	chr1_85651362_-	SINE	Alu	AluSz6
CAediting_77423	chr1_85651398_-	SINE	Alu	AluSz6
CAediting_77424	chr1_85651402_-	SINE	Alu	AluSz6
CAediting_77425	chr1_85651406_-	SINE	Alu	AluSz6
CAediting_77426	chr1_85651407_-	SINE	Alu	AluSz6
CAediting_77427	chr1_85651408_-	SINE	Alu	AluSz6
CAediting_77428	chr1_85651442_-	SINE	Alu	AluSz6
CAediting_77429	chr1_85651465_-	SINE	Alu	AluSz6
CAediting_77430	chr1_85651470_-	SINE	Alu	AluSz6
CAediting_77431	chr1_85651471_-	SINE	Alu	AluSz6
CAediting_77432	chr1_85651473_-	SINE	Alu	AluSz6
CAediting_77433	chr1_85651486_-	SINE	Alu	AluSz6
CAediting_77434	chr1_85651500_-	SINE	Alu	AluSz6
CAediting_77435	chr1_85651503_-	SINE	Alu	AluSz6
CAediting_77436	chr1_85651508_-	SINE	Alu	AluSz6
CAediting_77437	chr1_85651509_-	SINE	Alu	AluSz6
CAediting_77438	chr1_85651515_-	SINE	Alu	AluSz6
CAediting_77439	chr1_85651517_-	SINE	Alu	AluSz6
CAediting_77440	chr1_85651525_-	SINE	Alu	AluSz6
CAediting_77441	chr1_85651527_-	SINE	Alu	AluSz6
CAediting_77442	chr1_85651531_-	SINE	Alu	AluSz6
CAediting_77443	chr1_85653522_-	SINE	Alu	AluJr
CAediting_77444	chr1_85653523_-	SINE	Alu	AluJr
CAediting_77445	chr1_85653531_-	SINE	Alu	AluJr
CAediting_77446	chr1_85653536_-	SINE	Alu	AluJr
CAediting_77447	chr1_85653544_-	SINE	Alu	AluJr
CAediting_77448	chr1_85653545_-	SINE	Alu	AluJr
CAediting_77449	chr1_85653548_-	SINE	Alu	AluJr
CAediting_77450	chr1_85653563_-	SINE	Alu	AluJr
CAediting_77451	chr1_85653594_-	SINE	Alu	AluJr
CAediting_77452	chr1_85653596_-	SINE	Alu	AluJr
CAediting_77453	chr1_85653600_-	SINE	Alu	AluJr
CAediting_77454	chr1_85653627_-	SINE	Alu	AluJr
CAediting_77455	chr1_85653636_-	SINE	Alu	AluJr
CAediting_77456	chr1_85653641_-	SINE	Alu	AluJr
CAediting_77457	chr1_85653644_-	SINE	Alu	AluJr
CAediting_77458	chr1_85653712_-	SINE	Alu	AluJr
CAediting_77459	chr1_85658393_-	SINE	Alu	AluSc8
CAediting_77460	chr1_85658435_-	SINE	Alu	AluSc8
CAediting_77461	chr1_85658472_-	SINE	Alu	AluSc8
CAediting_77462	chr1_85658497_-	SINE	Alu	AluSc8
CAediting_77463	chr1_85658503_-	SINE	Alu	AluSc8
CAediting_77464	chr1_85658615_-	SINE	Alu	AluSp
CAediting_77465	chr1_85658747_-	SINE	Alu	AluSp
CAediting_77466	chr1_85658749_-	SINE	Alu	AluSp
CAediting_77467	chr1_85659453_-	DNA	hAT-Charlie	Chap1_Mam
CAediting_77468	chr1_85659511_-	DNA	hAT-Charlie	Chap1_Mam
CAediting_77469	chr1_85659521_-	DNA	hAT-Charlie	Chap1_Mam
CAediting_77470	chr1_85664908_-	SINE	Alu	AluSx
CAediting_77471	chr1_85664917_-	SINE	Alu	AluSx
CAediting_77472	chr1_85664920_-	SINE	Alu	AluSx
CAediting_77473	chr1_85665375_-	SINE	Alu	FLAM_C
CAediting_77474	chr1_85671455_-	SINE	Alu	AluJo
CAediting_77475	chr1_85671456_-	SINE	Alu	AluJo
CAediting_77476	chr1_85679683_-	SINE	Alu	AluSx
CAediting_77477	chr1_85679717_-	SINE	Alu	AluSx
CAediting_77478	chr1_85679722_-	SINE	Alu	AluSx
CAediting_77479	chr1_85679723_-	SINE	Alu	AluSx
CAediting_77480	chr1_85679805_-	SINE	Alu	AluSx
CAediting_77481	chr1_85679852_-	SINE	Alu	AluSx
CAediting_77482	chr1_85679946_-	SINE	Alu	AluJr
CAediting_77483	chr1_85679960_-	SINE	Alu	AluJr
CAediting_77484	chr1_85680010_-	SINE	Alu	AluJr
CAediting_77485	chr1_85680033_-	SINE	Alu	AluJr
CAediting_77486	chr1_85680084_-	SINE	Alu	AluJr
CAediting_77487	chr1_85680110_-	SINE	Alu	AluJr
CAediting_77488	chr1_85682136_-	SINE	Alu	AluY
CAediting_77489	chr1_85682150_-	SINE	Alu	AluY
CAediting_77490	chr1_85682156_-	SINE	Alu	AluY
CAediting_77491	chr1_85682225_-	SINE	Alu	AluY
CAediting_77492	chr1_85686090_-	SINE	Alu	AluY
CAediting_77493	chr1_85686100_-	SINE	Alu	AluY
CAediting_77494	chr1_85686126_-	SINE	Alu	AluY
CAediting_77495	chr1_85686162_-	SINE	Alu	AluY
CAediting_77496	chr1_85686240_-	SINE	Alu	AluY
CAediting_77497	chr1_85694594_-	SINE	Alu	AluY
CAediting_77498	chr1_85694731_-	SINE	Alu	AluY
CAediting_77499	chr1_85694732_-	SINE	Alu	AluY
CAediting_77500	chr1_85694733_-	SINE	Alu	AluY
CAediting_77501	chr1_85695019_-	SINE	Alu	AluSx1
CAediting_77502	chr1_85695081_-	SINE	Alu	AluSx1
CAediting_77503	chr1_85695221_-	SINE	Alu	AluSx1
CAediting_77504	chr1_85695262_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for ZNHIT6

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000117174.9.ZNHIT6.

Correlation between RNA A-to-I editing and PSI for ENSG00000117174.9.ZNHIT6.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNHIT6

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZNHIT6

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZNHIT6

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77421	chr1_85651358_-	ENSG00000117174.9	ENST00000431532	hsa-miR-660-3p	85651357	85651363	7mer-m8	85651356	85651376	162.00	-23.10
CAediting_77421	chr1_85651358_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6791-3p	85651356	85651362	7mer-m8	85651355	85651375	154.00	-18.11
CAediting_77421	chr1_85651358_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6829-3p	85651356	85651362	7mer-m8	85651355	85651374	155.00	-20.58
CAediting_77421	chr1_85651358_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6849-3p	85651353	85651359	7mer-m8	85651352	85651374	141.00	-14.45
CAediting_77425	chr1_85651406_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6844	85651405	85651411	7mer-m8	85651404	85651426	158.00	-9.30
CAediting_77426	chr1_85651407_-	ENSG00000117174.9	ENST00000431532	hsa-miR-578	85651405	85651411	7mer-m8	85651404	85651424	148.00	-9.14
CAediting_77426	chr1_85651407_-	ENSG00000117174.9	ENST00000431532	hsa-miR-643	85651406	85651413	8mer-1a	85651406	85651432	145.00	-14.76
CAediting_77430	chr1_85651470_-	ENSG00000117174.9	ENST00000431532	hsa-miR-10a-5p	85651467	85651473	7mer-m8	85651466	85651487	153.00	-18.76
CAediting_77430	chr1_85651470_-	ENSG00000117174.9	ENST00000431532	hsa-miR-10b-5p	85651467	85651473	7mer-m8	85651466	85651487	145.00	-17.79
CAediting_77430	chr1_85651470_-	ENSG00000117174.9	ENST00000431532	hsa-miR-146b-3p	85651468	85651474	7mer-m8	85651467	85651488	148.00	-21.02
CAediting_77430	chr1_85651470_-	ENSG00000117174.9	ENST00000431532	hsa-miR-1914-5p	85651469	85651474	6mer	85651468	85651489	140.00	-28.17
CAediting_77430	chr1_85651470_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4679	85651470	85651476	7mer-m8	85651469	85651490	140.00	-14.76
CAediting_77430	chr1_85651470_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4679	85651470	85651476	7mer-m8	85651469	85651490	140.00	-14.76
CAediting_77430	chr1_85651470_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4725-5p	85651465	85651472	8mer-1a	85651465	85651485	154.00	-22.14
CAediting_77430	chr1_85651470_-	ENSG00000117174.9	ENST00000431532	hsa-miR-504-5p	85651465	85651472	8mer-1a	85651465	85651488	158.00	-24.84
CAediting_77435	chr1_85651503_-	ENSG00000117174.9	ENST00000431532	hsa-miR-371a-3p	85651498	85651504	7mer-m8	85651497	85651523	147.00	-18.17
CAediting_77437	chr1_85651509_-	ENSG00000117174.9	ENST00000431532	hsa-miR-638	85651503	85651509	7mer-1a	85651503	85651527	141.00	-26.31
CAediting_77446	chr1_85653536_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6125	85653536	85653542	7mer-m8	85653535	85653554	140.00	-19.64
CAediting_77451	chr1_85653594_-	ENSG00000117174.9	ENST00000431532	hsa-miR-340-3p	85653593	85653599	7mer-m8	85653592	85653613	145.00	-15.89
CAediting_77451	chr1_85653594_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6827-3p	85653593	85653599	7mer-m8	85653592	85653612	149.00	-16.65
CAediting_77418	chr1_85650915_-	ENSG00000117174.9	ENST00000431532	hsa-miR-1281	85650915	85650921	7mer-m8	85650914	85650930	141.00	-17.27
CAediting_77424	chr1_85651402_-	ENSG00000117174.9	ENST00000431532	hsa-miR-3190-5p	85651397	85651403	7mer-m8	85651396	85651415	143.00	-16.24
CAediting_77424	chr1_85651402_-	ENSG00000117174.9	ENST00000431532	hsa-miR-548s	85651398	85651404	7mer-m8	85651397	85651419	145.00	-11.19
CAediting_77427	chr1_85651408_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4742-3p	85651407	85651414	8mer-1a	85651407	85651429	142.00	-11.93
CAediting_77431	chr1_85651471_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6790-3p	85651465	85651472	8mer-1a	85651465	85651490	147.00	-25.27
CAediting_77433	chr1_85651486_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6849-3p	85651486	85651492	7mer-m8	85651485	85651506	140.00	-18.02
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-518a-3p	85651496	85651502	7mer-m8	85651495	85651518	147.00	-16.05
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-518a-3p	85651496	85651502	7mer-m8	85651495	85651518	147.00	-16.05
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-518b	85651496	85651502	7mer-m8	85651495	85651515	146.00	-18.37
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-518c-3p	85651496	85651502	7mer-m8	85651495	85651516	147.00	-18.49
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-518d-3p	85651496	85651502	7mer-m8	85651495	85651515	145.00	-20.52
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-518e-3p	85651497	85651503	7mer-m8	85651496	85651517	144.00	-15.88
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-518f-3p	85651496	85651502	7mer-m8	85651495	85651515	145.00	-14.06
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-526a-3p	85651496	85651502	7mer-m8	85651495	85651515	146.00	-14.06
CAediting_77439	chr1_85651517_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6068	85651514	85651520	7mer-m8	85651513	85651534	151.00	-19.67
CAediting_77441	chr1_85651527_-	ENSG00000117174.9	ENST00000431532	hsa-miR-191-3p	85651524	85651529	6mer	85651523	85651546	145.00	-22.10
CAediting_77443	chr1_85653522_-	ENSG00000117174.9	ENST00000431532	hsa-miR-3189-3p	85653521	85653526	6mer	85653520	85653541	149.00	-26.80
CAediting_77443	chr1_85653522_-	ENSG00000117174.9	ENST00000431532	hsa-miR-432-5p	85653522	85653528	7mer-m8	85653521	85653546	152.00	-25.43
CAediting_77443	chr1_85653522_-	ENSG00000117174.9	ENST00000431532	hsa-miR-532-5p	85653518	85653524	7mer-m8	85653517	85653540	159.00	-19.64
CAediting_77444	chr1_85653523_-	ENSG00000117174.9	ENST00000431532	hsa-miR-516b-5p	85653522	85653528	7mer-m8	85653521	85653541	142.00	-13.42
CAediting_77444	chr1_85653523_-	ENSG00000117174.9	ENST00000431532	hsa-miR-516b-5p	85653522	85653528	7mer-m8	85653521	85653541	142.00	-13.42
CAediting_77444	chr1_85653523_-	ENSG00000117174.9	ENST00000431532	hsa-miR-518c-5p	85653521	85653527	7mer-m8	85653520	85653542	145.00	-19.63
CAediting_77444	chr1_85653523_-	ENSG00000117174.9	ENST00000431532	hsa-miR-5691	85653519	85653525	7mer-m8	85653518	85653539	157.00	-17.11
CAediting_77444	chr1_85653523_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6805-3p	85653519	85653525	7mer-m8	85653518	85653540	140.00	-10.60
CAediting_77447	chr1_85653544_-	ENSG00000117174.9	ENST00000431532	hsa-miR-1288-3p	85653541	85653547	7mer-m8	85653540	85653559	143.00	-15.54
CAediting_77447	chr1_85653544_-	ENSG00000117174.9	ENST00000431532	hsa-miR-3169	85653540	85653546	7mer-m8	85653539	85653561	151.00	-23.44
CAediting_77449	chr1_85653548_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4649-3p	85653548	85653554	7mer-m8	85653547	85653567	145.00	-17.97
CAediting_77449	chr1_85653548_-	ENSG00000117174.9	ENST00000431532	hsa-miR-544b	85653547	85653553	7mer-m8	85653546	85653567	162.00	-18.71
CAediting_77450	chr1_85653563_-	ENSG00000117174.9	ENST00000431532	hsa-miR-10a-3p	85653558	85653564	7mer-m8	85653557	85653578	147.00	-20.49
CAediting_77452	chr1_85653596_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6747-3p	85653592	85653598	7mer-m8	85653591	85653611	141.00	-18.85
CAediting_77452	chr1_85653596_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6752-3p	85653591	85653597	7mer-m8	85653590	85653610	145.00	-18.64
CAediting_77458	chr1_85653712_-	ENSG00000117174.9	ENST00000431532	hsa-miR-342-3p	85653708	85653714	7mer-m8	85653707	85653727	150.00	-20.28
CAediting_77457	chr1_85653644_-	ENSG00000117174.9	ENST00000431532	hsa-miR-1226-3p	85653644	85653650	7mer-m8	85653643	85653663	151.00	-18.78
CAediting_77457	chr1_85653644_-	ENSG00000117174.9	ENST00000431532	hsa-miR-593-5p	85653641	85653648	8mer-1a	85653641	85653665	157.00	-25.97
CAediting_77457	chr1_85653644_-	ENSG00000117174.9	ENST00000431532	hsa-miR-891a-3p	85653640	85653646	7mer-m8	85653639	85653660	168.00	-27.23
CAediting_77457	chr1_85653644_-	ENSG00000117174.9	ENST00000431532	hsa-miR-9851-3p	85653641	85653648	8mer-1a	85653641	85653661	160.00	-29.99

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77436	chr1_85651508_-	ENSG00000117174.9	ENST00000431532	hsa-miR-10399-5p	85651507	85651513	7mer-m8	85651506	85651527	148	-12.4
CAediting_77437	chr1_85651509_-	ENSG00000117174.9	ENST00000431532	hsa-miR-10399-5p	85651507	85651513	7mer-m8	85651506	85651527	148	-12.4
CAediting_77451	chr1_85653594_-	ENSG00000117174.9	ENST00000431532	hsa-miR-10a-5p	85653590	85653596	7mer-m8	85653589	85653612	148	-17.7
CAediting_77451	chr1_85653594_-	ENSG00000117174.9	ENST00000431532	hsa-miR-10b-5p	85653590	85653596	7mer-m8	85653589	85653612	148	-18.72
CAediting_77422	chr1_85651362_-	ENSG00000117174.9	ENST00000431532	hsa-miR-1200	85651358	85651365	8mer-1a	85651358	85651379	140	-13.37
CAediting_77446	chr1_85653536_-	ENSG00000117174.9	ENST00000431532	hsa-miR-12114	85653533	85653539	7mer-m8	85653532	85653555	151	-24.85
CAediting_77456	chr1_85653641_-	ENSG00000117174.9	ENST00000431532	hsa-miR-1263	85653641	85653647	7mer-m8	85653640	85653659	144	-14.45
CAediting_77457	chr1_85653644_-	ENSG00000117174.9	ENST00000431532	hsa-miR-1263	85653641	85653647	7mer-m8	85653640	85653659	144	-14.45
CAediting_77456	chr1_85653641_-	ENSG00000117174.9	ENST00000431532	hsa-miR-150-3p	85653641	85653646	6mer	85653640	85653662	142	-26.54
CAediting_77457	chr1_85653644_-	ENSG00000117174.9	ENST00000431532	hsa-miR-150-3p	85653641	85653646	6mer	85653640	85653662	142	-26.54
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-302a-3p	85651497	85651503	7mer-m8	85651496	85651518	141	-11.02
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-302b-3p	85651497	85651503	7mer-m8	85651496	85651516	142	-10.87
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-302c-3p	85651497	85651503	7mer-m8	85651496	85651516	146	-12.22
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-302d-3p	85651497	85651503	7mer-m8	85651496	85651523	144	-14.25
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-302e	85651497	85651503	7mer-m8	85651496	85651512	141	-8.62
CAediting_77423	chr1_85651398_-	ENSG00000117174.9	ENST00000431532	hsa-miR-3064-5p	85651397	85651402	6mer	85651396	85651417	140	-17.25
CAediting_77424	chr1_85651402_-	ENSG00000117174.9	ENST00000431532	hsa-miR-3064-5p	85651397	85651402	6mer	85651396	85651417	140	-17.25
CAediting_77446	chr1_85653536_-	ENSG00000117174.9	ENST00000431532	hsa-miR-3190-3p	85653535	85653541	7mer-m8	85653534	85653560	150	-24.03
CAediting_77451	chr1_85653594_-	ENSG00000117174.9	ENST00000431532	hsa-miR-339-5p	85653591	85653597	7mer-m8	85653590	85653614	155	-25.31
CAediting_77452	chr1_85653596_-	ENSG00000117174.9	ENST00000431532	hsa-miR-339-5p	85653591	85653597	7mer-m8	85653590	85653614	155	-25.31
CAediting_77429	chr1_85651465_-	ENSG00000117174.9	ENST00000431532	hsa-miR-3622a-3p	85651461	85651467	7mer-m8	85651460	85651481	155	-24.5
CAediting_77429	chr1_85651465_-	ENSG00000117174.9	ENST00000431532	hsa-miR-3622b-3p	85651461	85651467	7mer-m8	85651460	85651480	147	-21.38
CAediting_77454	chr1_85653627_-	ENSG00000117174.9	ENST00000431532	hsa-miR-374c-3p	85653625	85653631	7mer-m8	85653624	85653645	155	-11.26
CAediting_77440	chr1_85651525_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4252	85651520	85651526	7mer-m8	85651519	85651538	154	-21.39
CAediting_77451	chr1_85653594_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4421	85653592	85653598	7mer-m8	85653591	85653612	155	-18
CAediting_77452	chr1_85653596_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4421	85653592	85653598	7mer-m8	85653591	85653612	155	-18
CAediting_77419	chr1_85651266_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4652-3p	85651263	85651268	6mer	85651262	85651282	140	-16.37
CAediting_77455	chr1_85653636_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4658	85653632	85653638	7mer-m8	85653631	85653653	150	-20.98
CAediting_77438	chr1_85651515_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4677-3p	85651514	85651520	7mer-m8	85651513	85651533	146	-17.17
CAediting_77439	chr1_85651517_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4677-3p	85651514	85651520	7mer-m8	85651513	85651533	146	-17.17
CAediting_77424	chr1_85651402_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4735-5p	85651401	85651407	7mer-m8	85651400	85651421	140	-5.48
CAediting_77425	chr1_85651406_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4735-5p	85651401	85651407	7mer-m8	85651400	85651421	140	-5.48
CAediting_77419	chr1_85651266_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4743-3p	85651263	85651269	7mer-m8	85651262	85651281	143	-17.73
CAediting_77419	chr1_85651266_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4778-5p	85651262	85651268	7mer-m8	85651261	85651282	147	-13.39
CAediting_77428	chr1_85651442_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4781-3p	85651438	85651444	7mer-m8	85651437	85651455	152	-18.83
CAediting_77423	chr1_85651398_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4794	85651397	85651403	7mer-m8	85651396	85651417	140	-12.3
CAediting_77424	chr1_85651402_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4794	85651397	85651403	7mer-m8	85651396	85651417	140	-12.3
CAediting_77418	chr1_85650915_-	ENSG00000117174.9	ENST00000431532	hsa-miR-5001-3p	85650913	85650919	7mer-m8	85650912	85650933	147	-19.65
CAediting_77435	chr1_85651503_-	ENSG00000117174.9	ENST00000431532	hsa-miR-5089-5p	85651503	85651509	7mer-m8	85651502	85651524	148	-16.21
CAediting_77436	chr1_85651508_-	ENSG00000117174.9	ENST00000431532	hsa-miR-5089-5p	85651503	85651509	7mer-m8	85651502	85651524	148	-16.21
CAediting_77421	chr1_85651358_-	ENSG00000117174.9	ENST00000431532	hsa-miR-516a-3p	85651356	85651362	7mer-m8	85651355	85651372	140	-14.28
CAediting_77421	chr1_85651358_-	ENSG00000117174.9	ENST00000431532	hsa-miR-516a-3p	85651356	85651362	7mer-m8	85651355	85651372	140	-14.28
CAediting_77421	chr1_85651358_-	ENSG00000117174.9	ENST00000431532	hsa-miR-516b-3p	85651356	85651362	7mer-m8	85651355	85651372	140	-14.28
CAediting_77421	chr1_85651358_-	ENSG00000117174.9	ENST00000431532	hsa-miR-516b-3p	85651356	85651362	7mer-m8	85651355	85651372	140	-14.28
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-519d-3p	85651496	85651502	7mer-m8	85651495	85651515	146	-14.94
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-520a-3p	85651497	85651503	7mer-m8	85651496	85651517	140	-14.16
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-520b-3p	85651497	85651503	7mer-m8	85651496	85651515	141	-13
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-520c-3p	85651497	85651503	7mer-m8	85651496	85651516	141	-13
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-520d-3p	85651497	85651503	7mer-m8	85651496	85651517	140	-12.25
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-520e-3p	85651497	85651503	7mer-m8	85651496	85651516	140	-12.25
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-520g-3p	85651495	85651501	7mer-m8	85651494	85651516	152	-16.28
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-520h	85651495	85651501	7mer-m8	85651494	85651515	150	-16.09
CAediting_77434	chr1_85651500_-	ENSG00000117174.9	ENST00000431532	hsa-miR-526b-3p	85651496	85651502	7mer-m8	85651495	85651515	146	-12.51
CAediting_77440	chr1_85651525_-	ENSG00000117174.9	ENST00000431532	hsa-miR-550b-2-5p	85651525	85651531	7mer-m8	85651524	85651544	146	-13.19
CAediting_77441	chr1_85651527_-	ENSG00000117174.9	ENST00000431532	hsa-miR-550b-2-5p	85651525	85651531	7mer-m8	85651524	85651544	146	-13.19
CAediting_77440	chr1_85651525_-	ENSG00000117174.9	ENST00000431532	hsa-miR-550b-2-5p	85651525	85651531	7mer-m8	85651524	85651544	146	-13.19
CAediting_77441	chr1_85651527_-	ENSG00000117174.9	ENST00000431532	hsa-miR-550b-2-5p	85651525	85651531	7mer-m8	85651524	85651544	146	-13.19
CAediting_77454	chr1_85653627_-	ENSG00000117174.9	ENST00000431532	hsa-miR-5582-3p	85653622	85653628	7mer-m8	85653621	85653645	155	-14.51
CAediting_77451	chr1_85653594_-	ENSG00000117174.9	ENST00000431532	hsa-miR-5699-3p	85653592	85653598	7mer-m8	85653591	85653612	149	-19.38
CAediting_77452	chr1_85653596_-	ENSG00000117174.9	ENST00000431532	hsa-miR-5699-3p	85653592	85653598	7mer-m8	85653591	85653612	149	-19.38
CAediting_77455	chr1_85653636_-	ENSG00000117174.9	ENST00000431532	hsa-miR-574-5p	85653632	85653639	8mer-1a	85653632	85653654	154	-25.47
CAediting_77435	chr1_85651503_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6506-5p	85651502	85651508	7mer-m8	85651501	85651524	150	-17.86
CAediting_77440	chr1_85651525_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6529-3p	85651524	85651530	7mer-m8	85651523	85651545	154	-14.93
CAediting_77441	chr1_85651527_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6529-3p	85651524	85651530	7mer-m8	85651523	85651545	154	-14.93
CAediting_77423	chr1_85651398_-	ENSG00000117174.9	ENST00000431532	hsa-miR-664a-5p	85651397	85651403	7mer-m8	85651396	85651419	141	-13.02
CAediting_77424	chr1_85651402_-	ENSG00000117174.9	ENST00000431532	hsa-miR-664a-5p	85651397	85651403	7mer-m8	85651396	85651419	141	-13.02
CAediting_77419	chr1_85651266_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6773-3p	85651264	85651271	8mer-1a	85651264	85651288	154	-21.84
CAediting_77455	chr1_85653636_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6790-5p	85653632	85653638	7mer-m8	85653631	85653653	155	-21.29
CAediting_77439	chr1_85651517_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6807-5p	85651517	85651523	7mer-m8	85651516	85651538	148	-22.38
CAediting_77451	chr1_85653594_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6818-3p	85653594	85653600	7mer-m8	85653593	85653614	140	-12.82
CAediting_77452	chr1_85653596_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6818-3p	85653594	85653600	7mer-m8	85653593	85653614	140	-12.82
CAediting_77418	chr1_85650915_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6836-3p	85650915	85650921	7mer-m8	85650914	85650934	145	-19.68
CAediting_77422	chr1_85651362_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6869-5p	85651362	85651368	7mer-m8	85651361	85651383	146	-17.14
CAediting_77440	chr1_85651525_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6889-3p	85651524	85651530	7mer-m8	85651523	85651544	147	-15.09
CAediting_77441	chr1_85651527_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6889-3p	85651524	85651530	7mer-m8	85651523	85651544	147	-15.09
CAediting_77421	chr1_85651358_-	ENSG00000117174.9	ENST00000431532	hsa-miR-7162-5p	85651356	85651362	7mer-m8	85651355	85651371	142	-16.14
CAediting_77418	chr1_85650915_-	ENSG00000117174.9	ENST00000431532	hsa-miR-760	85650910	85650916	7mer-m8	85650909	85650928	145	-14.33

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000117174.9	ENST00000431532	hsa-miR-605-3p	85650849	85650855	7mer-m8	85650848	85650869	156	-14.89
CAediting_980496	chr14_31014685_-	ENSG00000117174.9	ENST00000431532	hsa-miR-624-3p	85651425	85651431	7mer-m8	85651424	85651444	160	-20.97
CAediting_980496	chr14_31014685_-	ENSG00000117174.9	ENST00000431532	hsa-miR-624-3p	85650018	85650024	7mer-m8	85650017	85650042	149	-13.82
CAediting_393	chr1_1167164_+	ENSG00000117174.9	ENST00000431532	hsa-miR-200b-3p	85649750	85649756	7mer-m8	85649749	85649775	150	-13.18
CAediting_688080	chr9_63819626_+	ENSG00000117174.9	ENST00000431532	hsa-miR-4477b	85653693	85653700	8mer-1a	85653693	85653713	154	-13.71
CAediting_1229414	chr17_67471546_+	ENSG00000117174.9	ENST00000431532	hsa-miR-548aa	85649611	85649617	7mer-m8	85649610	85649634	149	-9.63
CAediting_1229415	chr17_67471547_+	ENSG00000117174.9	ENST00000431532	hsa-miR-548aa	85653806	85653812	7mer-m8	85653805	85653829	140	-11.1
CAediting_1229415	chr17_67471547_+	ENSG00000117174.9	ENST00000431532	hsa-miR-548aa	85650764	85650770	7mer-m8	85650763	85650785	155	-13.29
CAediting_1229415	chr17_67471547_+	ENSG00000117174.9	ENST00000431532	hsa-miR-548aa	85649669	85649676	8mer-1a	85649669	85649693	150	-7.46
CAediting_228905	chr2_188297554_+	ENSG00000117174.9	ENST00000431532	hsa-miR-561-3p	85650597	85650603	7mer-m8	85650596	85650617	143	-6.54
CAediting_396018	chr5_1062918_-	ENSG00000117174.9	ENST00000431532	hsa-miR-4635	85653547	85653553	7mer-m8	85653546	85653566	158	-17.26
CAediting_573001	chr7_92204086_-	ENSG00000117174.9	ENST00000431532	hsa-miR-1285-5p	85651257	85651262	6mer	85651256	85651276	151	-30.19
CAediting_573001	chr7_92204086_-	ENSG00000117174.9	ENST00000431532	hsa-miR-1285-5p	85653284	85653291	8mer-1a	85653284	85653304	140	-13.64

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_442554	chr5_154685830_+	ENSG00000117174.9	ENST00000431532	hsa-miR-1303	85652453	85652460	8mer-1a	85652453	85652474	140	-10.12
CAediting_393	chr1_1167164_+	ENSG00000117174.9	ENST00000431532	hsa-miR-200b-3p	85652387	85652394	8mer-1a	85652387	85652407	146	-14.44
CAediting_1229413	chr17_67471544_+	ENSG00000117174.9	ENST00000431532	hsa-miR-548aa	85651666	85651672	7mer-m8	85651665	85651689	147	-12.6
CAediting_1229414	chr17_67471546_+	ENSG00000117174.9	ENST00000431532	hsa-miR-548aa	85651666	85651672	7mer-m8	85651665	85651689	147	-12.6
CAediting_1229415	chr17_67471547_+	ENSG00000117174.9	ENST00000431532	hsa-miR-548aa	85651666	85651672	7mer-m8	85651665	85651689	147	-12.6
CAediting_1229413	chr17_67471544_+	ENSG00000117174.9	ENST00000431532	hsa-miR-548aa	85650336	85650342	7mer-m8	85650335	85650361	141	-8.85
CAediting_1229414	chr17_67471546_+	ENSG00000117174.9	ENST00000431532	hsa-miR-548aa	85650336	85650342	7mer-m8	85650335	85650361	141	-8.85
CAediting_1229415	chr17_67471547_+	ENSG00000117174.9	ENST00000431532	hsa-miR-548aa	85650336	85650342	7mer-m8	85650335	85650361	141	-8.85
CAediting_228905	chr2_188297554_+	ENSG00000117174.9	ENST00000431532	hsa-miR-561-3p	85653765	85653771	7mer-m8	85653764	85653786	151	-4.93
CAediting_228905	chr2_188297554_+	ENSG00000117174.9	ENST00000431532	hsa-miR-561-3p	85649617	85649623	7mer-m8	85649616	85649641	152	-11.76
CAediting_228905	chr2_188297554_+	ENSG00000117174.9	ENST00000431532	hsa-miR-561-3p	85649512	85649518	7mer-1a	85649512	85649533	145	-10.51
CAediting_748296	chr10_51299626_+	ENSG00000117174.9	ENST00000431532	hsa-miR-605-3p	85650733	85650739	7mer-m8	85650732	85650753	144	-12.2
CAediting_580943	chr7_100356700_+	ENSG00000117174.9	ENST00000431532	hsa-miR-6840-3p	85651282	85651288	7mer-m8	85651281	85651301	146	-26.82
CAediting_580943	chr7_100356700_+	ENSG00000117174.9	ENST00000431532	hsa-miR-6840-3p	85650412	85650418	7mer-m8	85650411	85650432	154	-24.58
CAediting_1399425	chr20_1392958_-	ENSG00000117174.9	ENST00000431532	hsa-miR-6869-5p	85651362	85651368	7mer-m8	85651361	85651383	146	-17.14

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZNHIT6

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000431532.5	protein_coding
ENST00000370574.3	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_77418	ENST00000431532.5	chr1_85650915_-	-1591.80	-1592.60	-1639.10
CAediting_77419	ENST00000431532.5	chr1_85651266_-	-1592.60	-1592.60	-1639.10
CAediting_77420	ENST00000431532.5	chr1_85651346_-	-1593.40	-1592.60	-1639.10
CAediting_77421	ENST00000431532.5	chr1_85651358_-	-1595.40	-1592.60	-1639.10
CAediting_77422	ENST00000431532.5	chr1_85651362_-	-1592.90	-1592.60	-1639.10
CAediting_77423	ENST00000431532.5	chr1_85651398_-	-1595.50	-1592.60	-1639.10
CAediting_77424	ENST00000431532.5	chr1_85651402_-	-1592.30	-1592.60	-1639.10
CAediting_77425	ENST00000431532.5	chr1_85651406_-	-1592.70	-1592.60	-1639.10
CAediting_77426	ENST00000431532.5	chr1_85651407_-	-1593.30	-1592.60	-1639.10
CAediting_77427	ENST00000431532.5	chr1_85651408_-	-1592.70	-1592.60	-1639.10
CAediting_77428	ENST00000431532.5	chr1_85651442_-	-1597.10	-1592.60	-1639.10
CAediting_77429	ENST00000431532.5	chr1_85651465_-	-1591.90	-1592.60	-1639.10
CAediting_77430	ENST00000431532.5	chr1_85651470_-	-1592.60	-1592.60	-1639.10
CAediting_77431	ENST00000431532.5	chr1_85651471_-	-1595.20	-1592.60	-1639.10
CAediting_77432	ENST00000431532.5	chr1_85651473_-	-1596.20	-1592.60	-1639.10
CAediting_77433	ENST00000431532.5	chr1_85651486_-	-1591.70	-1592.60	-1639.10
CAediting_77434	ENST00000431532.5	chr1_85651500_-	-1597.70	-1592.60	-1639.10
CAediting_77435	ENST00000431532.5	chr1_85651503_-	-1591.80	-1592.60	-1639.10
CAediting_77436	ENST00000431532.5	chr1_85651508_-	-1592.60	-1592.60	-1639.10
CAediting_77437	ENST00000431532.5	chr1_85651509_-	-1592.70	-1592.60	-1639.10
CAediting_77438	ENST00000431532.5	chr1_85651515_-	-1594.40	-1592.60	-1639.10
CAediting_77439	ENST00000431532.5	chr1_85651517_-	-1592.60	-1592.60	-1639.10
CAediting_77440	ENST00000431532.5	chr1_85651525_-	-1596.20	-1592.60	-1639.10
CAediting_77441	ENST00000431532.5	chr1_85651527_-	-1594.30	-1592.60	-1639.10
CAediting_77442	ENST00000431532.5	chr1_85651531_-	-1591.30	-1592.60	-1639.10
CAediting_77443	ENST00000431532.5	chr1_85653522_-	-1592.30	-1592.60	-1639.10
CAediting_77444	ENST00000431532.5	chr1_85653523_-	-1592.70	-1592.60	-1639.10
CAediting_77445	ENST00000431532.5	chr1_85653531_-	-1591.90	-1592.60	-1639.10
CAediting_77446	ENST00000431532.5	chr1_85653536_-	-1598.00	-1592.60	-1639.10
CAediting_77447	ENST00000431532.5	chr1_85653544_-	-1592.40	-1592.60	-1639.10
CAediting_77448	ENST00000431532.5	chr1_85653545_-	-1596.80	-1592.60	-1639.10
CAediting_77449	ENST00000431532.5	chr1_85653548_-	-1592.60	-1592.60	-1639.10
CAediting_77450	ENST00000431532.5	chr1_85653563_-	-1592.30	-1592.60	-1639.10
CAediting_77451	ENST00000431532.5	chr1_85653594_-	-1591.90	-1592.60	-1639.10
CAediting_77452	ENST00000431532.5	chr1_85653596_-	-1592.90	-1592.60	-1639.10
CAediting_77453	ENST00000431532.5	chr1_85653600_-	-1592.30	-1592.60	-1639.10
CAediting_77454	ENST00000431532.5	chr1_85653627_-	-1592.30	-1592.60	-1639.10
CAediting_77455	ENST00000431532.5	chr1_85653636_-	-1598.00	-1592.60	-1639.10
CAediting_77456	ENST00000431532.5	chr1_85653641_-	-1592.20	-1592.60	-1639.10
CAediting_77457	ENST00000431532.5	chr1_85653644_-	-1597.80	-1592.60	-1639.10
CAediting_77458	ENST00000431532.5	chr1_85653712_-	-1592.60	-1592.60	-1639.10
CAediting_77443	ENST00000370574.3	chr1_85653522_-	-755.80	-753.50	-763.90
CAediting_77444	ENST00000370574.3	chr1_85653523_-	-753.50	-753.50	-763.90
CAediting_77445	ENST00000370574.3	chr1_85653531_-	-753.70	-753.50	-763.90
CAediting_77446	ENST00000370574.3	chr1_85653536_-	-753.10	-753.50	-763.90
CAediting_77447	ENST00000370574.3	chr1_85653544_-	-753.80	-753.50	-763.90
CAediting_77448	ENST00000370574.3	chr1_85653545_-	-753.60	-753.50	-763.90
CAediting_77449	ENST00000370574.3	chr1_85653548_-	-757.60	-753.50	-763.90
CAediting_77450	ENST00000370574.3	chr1_85653563_-	-752.80	-753.50	-763.90
CAediting_77451	ENST00000370574.3	chr1_85653594_-	-752.70	-753.50	-763.90
CAediting_77452	ENST00000370574.3	chr1_85653596_-	-753.00	-753.50	-763.90
CAediting_77453	ENST00000370574.3	chr1_85653600_-	-753.40	-753.50	-763.90
CAediting_77454	ENST00000370574.3	chr1_85653627_-	-753.50	-753.50	-763.90
CAediting_77455	ENST00000370574.3	chr1_85653636_-	-753.80	-753.50	-763.90
CAediting_77456	ENST00000370574.3	chr1_85653641_-	-753.50	-753.50	-763.90
CAediting_77457	ENST00000370574.3	chr1_85653644_-	-756.50	-753.50	-763.90
CAediting_77458	ENST00000370574.3	chr1_85653712_-	-754.20	-753.50	-763.90

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Relation with ADAR for ZNHIT6

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_77421	chr1_85651358_-	.	.	.	.	0.00404212253718645	0.272025406100467
BLCA	CAediting_77436	chr1_85651508_-	.	.	.	.	0.0229807764212325	0.242224768396748
BRCA	CAediting_77436	chr1_85651508_-	0.000131258261590589	0.186628094302085	.	.	.	.
LUSC	CAediting_77436	chr1_85651508_-	0.0383485081223424	0.212867504464853	.	.	.	.
STAD	CAediting_77436	chr1_85651508_-	.	.	0.00211297846912447	0.340851521324211	.	.
THCA	CAediting_77436	chr1_85651508_-	0.0473969909224977	0.166108794173421	.	.	.	.
BRCA	CAediting_77437	chr1_85651509_-	0.000116104342105978	0.203991460301724	.	.	.	.
LUSC	CAediting_77437	chr1_85651509_-	0.00974641328851521	0.318380553790382	.	.	.	.
THCA	CAediting_77437	chr1_85651509_-	.	.	.	.	0.00310781933899906	0.285933404337363
OV	CAediting_77437	chr1_85651509_-	.	.	.	.	0.032364648728149	0.216368881445836

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Relation with cancer stages for ZNHIT6

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
LUAD	pathologic_stage	CAediting_77436	chr1_85651508_-	0.0479896661307852	0.196307545175997

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Relation with survival for ZNHIT6

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BRCA	CAediting_77436	chr1_85651508_-	0.00991106907267525	0.027846	0.0249367

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RelatedDrugs for ZNHIT6

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ZNHIT6

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene