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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CRLS1 (CAeditome ID:54675)

Gene summary for CRLS1

check button Gene summary
Gene informationGene symbol

CRLS1

Gene ID

54675

Gene namecardiolipin synthase 1
SynonymsC20orf155|CLS|CLS1|GCD10|dJ967N21.6
Cytomap

20p12.3

Type of geneprotein-coding
Descriptioncardiolipin synthase (CMP-forming)
Modification date20210518
UniProtAcc

Q9UJA2

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for CRLS1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000088766.10
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1405152(6010852, +), CAediting_1405153(6010858, +), CAediting_1405154(6010866, +), CAediting_1405155(6010870, +), CAediting_1405156(6010896, +), CAediting_1405157(6010902, +), CAediting_1405158(6010910, +), CAediting_1405159(6010923, +), CAediting_1405160(6010937, +), CAediting_1405161(6013288, +), CAediting_1405162(6017023, +), CAediting_1405163(6017035, +), CAediting_1405164(6017042, +), CAediting_1405165(6017047, +), CAediting_1405166(6017061, +), CAediting_1405167(6017091, +), CAediting_1405168(6017944, +), CAediting_1405169(6017946, +), CAediting_1405170(6017962, +), CAediting_1405171(6017963, +), CAediting_1405172(6017971, +), CAediting_1405173(6017998, +), CAediting_1405174(6018008, +), CAediting_1405175(6018016, +), CAediting_1405176(6018017, +), CAediting_1405177(6018019, +), CAediting_1405178(6018022, +), CAediting_1405179(6018031, +), CAediting_1405180(6018032, +), CAediting_1405181(6018034, +), CAediting_1405182(6018040, +), CAediting_1405183(6018041, +), CAediting_1405184(6018042, +), CAediting_1405185(6018051, +), CAediting_1405186(6018054, +), CAediting_1405187(6018055, +), CAediting_1405188(6018056, +), CAediting_1405189(6018057, +), CAediting_1405190(6018058, +), CAediting_1405191(6018060, +), CAediting_1405192(6018069, +), CAediting_1405193(6018085, +), CAediting_1405194(6018095, +), CAediting_1405195(6018096, +), CAediting_1405196(6018101, +), CAediting_1405197(6018105, +), CAediting_1405198(6018109, +), CAediting_1405199(6018112, +), CAediting_1405200(6018128, +), CAediting_1405201(6018130, +), CAediting_1405202(6018136, +), CAediting_1405203(6018137, +), CAediting_1405204(6018144, +), CAediting_1405205(6018148, +), CAediting_1405206(6018157, +), CAediting_1405207(6018161, +), CAediting_1405208(6018166, +), CAediting_1405209(6018173, +), CAediting_1405210(6018176, +), CAediting_1405211(6018192, +), CAediting_1405212(6019731, +), CAediting_1405213(6019791, +), CAediting_1405214(6019801, +), CAediting_1405215(6019827, +), CAediting_1405216(6019844, +), CAediting_1405217(6019847, +), CAediting_1405218(6019886, +), CAediting_1405219(6019944, +), CAediting_1405220(6021115, +), CAediting_1405221(6021179, +), CAediting_1405222(6021206, +), CAediting_1405223(6021264, +), CAediting_1405224(6022451, +), CAediting_1405225(6022560, +), CAediting_1405226(6023996, +), CAediting_1405227(6024137, +), CAediting_1405228(6024139, +), CAediting_1405229(6024166, +), CAediting_1405230(6027233, +), CAediting_1405231(6027268, +), CAediting_1405232(6027375, +), CAediting_1405233(6027459, +), CAediting_1405234(6027556, +), CAediting_1405235(6027564, +), CAediting_1405236(6027600, +), CAediting_1405237(6027604, +), CAediting_1405238(6027650, +), CAediting_1405239(6027654, +), CAediting_1405240(6027667, +), CAediting_1405241(6029395, +), CAediting_1405242(6029421, +), CAediting_1405243(6029426, +), CAediting_1405244(6029429, +), CAediting_1405245(6029479, +), CAediting_1405246(6029489, +), CAediting_1405247(6029491, +), CAediting_1405248(6029542, +), CAediting_1405249(6029619, +), CAediting_1405250(6029620, +), CAediting_1405251(6030451, +), CAediting_1405252(6030452, +), CAediting_1405253(6030468, +), CAediting_1405254(6030473, +), CAediting_1405255(6030494, +), CAediting_1405256(6030498, +), CAediting_1405257(6030513, +), CAediting_1405258(6030522, +), CAediting_1405259(6030527, +), CAediting_1405260(6030531, +), CAediting_1405261(6030537, +), CAediting_1405262(6030545, +), CAediting_1405263(6030546, +), CAediting_1405264(6030547, +), CAediting_1405265(6030558, +), CAediting_1405266(6030560, +), CAediting_1405267(6030561, +), CAediting_1405268(6030563, +), CAediting_1405269(6030564, +), CAediting_1405270(6030566, +), CAediting_1405271(6030575, +), CAediting_1405272(6030579, +), CAediting_1405273(6030603, +), CAediting_1405274(6030607, +), CAediting_1405275(6030627, +), CAediting_1405276(6030652, +), CAediting_1405277(6030653, +), CAediting_1405278(6030660, +), CAediting_1405279(6030679, +), CAediting_1405280(6030702, +), CAediting_1405281(6030706, +), CAediting_1405282(6030707, +), CAediting_1405283(6035954, +), CAediting_1405284(6035971, +), CAediting_1405285(6036066, +), CAediting_1405286(6036118, +), CAediting_1405287(6036159, +), CAediting_1405288(6036233, +), CAediting_1405289(6037183, +), CAediting_1405290(6037702, +), CAediting_1405291(6037818, +), CAediting_1405292(6037872, +), CAediting_1405293(6037975, +), CAediting_1405294(6038010, +), CAediting_1405295(6039214, +),

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RNA editing positional annotations for CRLS1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1405152chr20_6010852_+ncRNA_intronic
CAediting_1405153chr20_6010858_+ncRNA_intronic
CAediting_1405154chr20_6010866_+ncRNA_intronic
CAediting_1405155chr20_6010870_+ncRNA_intronic
CAediting_1405156chr20_6010896_+ncRNA_intronic
CAediting_1405157chr20_6010902_+ncRNA_intronic
CAediting_1405158chr20_6010910_+ncRNA_intronic
CAediting_1405159chr20_6010923_+ncRNA_intronic
CAediting_1405160chr20_6010937_+ncRNA_intronic
CAediting_1405161chr20_6013288_+ncRNA_intronic
CAediting_1405162chr20_6017023_+ncRNA_intronic
CAediting_1405163chr20_6017035_+ncRNA_intronic
CAediting_1405164chr20_6017042_+ncRNA_intronic
CAediting_1405165chr20_6017047_+ncRNA_intronic
CAediting_1405166chr20_6017061_+ncRNA_intronic
CAediting_1405167chr20_6017091_+ncRNA_intronic
CAediting_1405168chr20_6017944_+ncRNA_intronic
CAediting_1405169chr20_6017946_+ncRNA_intronic
CAediting_1405170chr20_6017962_+ncRNA_intronic
CAediting_1405171chr20_6017963_+ncRNA_intronic
CAediting_1405172chr20_6017971_+ncRNA_intronic
CAediting_1405173chr20_6017998_+ncRNA_intronic
CAediting_1405174chr20_6018008_+ncRNA_intronic
CAediting_1405175chr20_6018016_+ncRNA_intronic
CAediting_1405176chr20_6018017_+ncRNA_intronic
CAediting_1405177chr20_6018019_+ncRNA_intronic
CAediting_1405178chr20_6018022_+ncRNA_intronic
CAediting_1405179chr20_6018031_+ncRNA_intronic
CAediting_1405180chr20_6018032_+ncRNA_intronic
CAediting_1405181chr20_6018034_+ncRNA_intronic
CAediting_1405182chr20_6018040_+ncRNA_intronic
CAediting_1405183chr20_6018041_+ncRNA_intronic
CAediting_1405184chr20_6018042_+ncRNA_intronic
CAediting_1405185chr20_6018051_+ncRNA_intronic
CAediting_1405186chr20_6018054_+ncRNA_intronic
CAediting_1405187chr20_6018055_+ncRNA_intronic
CAediting_1405188chr20_6018056_+ncRNA_intronic
CAediting_1405189chr20_6018057_+ncRNA_intronic
CAediting_1405190chr20_6018058_+ncRNA_intronic
CAediting_1405191chr20_6018060_+ncRNA_intronic
CAediting_1405192chr20_6018069_+ncRNA_intronic
CAediting_1405193chr20_6018085_+ncRNA_intronic
CAediting_1405194chr20_6018095_+ncRNA_intronic
CAediting_1405195chr20_6018096_+ncRNA_intronic
CAediting_1405196chr20_6018101_+ncRNA_intronic
CAediting_1405197chr20_6018105_+ncRNA_intronic
CAediting_1405198chr20_6018109_+ncRNA_intronic
CAediting_1405199chr20_6018112_+ncRNA_intronic
CAediting_1405200chr20_6018128_+ncRNA_intronic
CAediting_1405201chr20_6018130_+ncRNA_intronic
CAediting_1405202chr20_6018136_+ncRNA_intronic
CAediting_1405203chr20_6018137_+ncRNA_intronic
CAediting_1405204chr20_6018144_+ncRNA_intronic
CAediting_1405205chr20_6018148_+ncRNA_intronic
CAediting_1405206chr20_6018157_+ncRNA_intronic
CAediting_1405207chr20_6018161_+ncRNA_intronic
CAediting_1405208chr20_6018166_+ncRNA_intronic
CAediting_1405209chr20_6018173_+ncRNA_intronic
CAediting_1405210chr20_6018176_+ncRNA_intronic
CAediting_1405211chr20_6018192_+ncRNA_intronic
CAediting_1405212chr20_6019731_+ncRNA_intronic
CAediting_1405213chr20_6019791_+ncRNA_intronic
CAediting_1405214chr20_6019801_+ncRNA_intronic
CAediting_1405215chr20_6019827_+ncRNA_intronic
CAediting_1405216chr20_6019844_+ncRNA_intronic
CAediting_1405217chr20_6019847_+ncRNA_intronic
CAediting_1405218chr20_6019886_+ncRNA_intronic
CAediting_1405219chr20_6019944_+ncRNA_intronic
CAediting_1405220chr20_6021115_+ncRNA_intronic
CAediting_1405221chr20_6021179_+ncRNA_intronic
CAediting_1405222chr20_6021206_+ncRNA_intronic
CAediting_1405223chr20_6021264_+ncRNA_intronic
CAediting_1405224chr20_6022451_+ncRNA_intronic
CAediting_1405225chr20_6022560_+ncRNA_intronic
CAediting_1405226chr20_6023996_+ncRNA_intronic
CAediting_1405227chr20_6024137_+ncRNA_intronic
CAediting_1405228chr20_6024139_+ncRNA_intronic
CAediting_1405229chr20_6024166_+ncRNA_intronic
CAediting_1405230chr20_6027233_+ncRNA_intronic
CAediting_1405231chr20_6027268_+ncRNA_intronic
CAediting_1405232chr20_6027375_+ncRNA_intronic
CAediting_1405233chr20_6027459_+ncRNA_intronic
CAediting_1405234chr20_6027556_+ncRNA_intronic
CAediting_1405235chr20_6027564_+ncRNA_intronic
CAediting_1405236chr20_6027600_+ncRNA_intronic
CAediting_1405237chr20_6027604_+ncRNA_intronic
CAediting_1405238chr20_6027650_+ncRNA_intronic
CAediting_1405239chr20_6027654_+ncRNA_intronic
CAediting_1405240chr20_6027667_+ncRNA_intronic
CAediting_1405241chr20_6029395_+ncRNA_intronic
CAediting_1405242chr20_6029421_+ncRNA_intronic
CAediting_1405243chr20_6029426_+ncRNA_intronic
CAediting_1405244chr20_6029429_+ncRNA_intronic
CAediting_1405245chr20_6029479_+ncRNA_intronic
CAediting_1405246chr20_6029489_+ncRNA_intronic
CAediting_1405247chr20_6029491_+ncRNA_intronic
CAediting_1405248chr20_6029542_+ncRNA_intronic
CAediting_1405249chr20_6029619_+ncRNA_intronic
CAediting_1405250chr20_6029620_+ncRNA_intronic
CAediting_1405251chr20_6030451_+ncRNA_intronic
CAediting_1405252chr20_6030452_+ncRNA_intronic
CAediting_1405253chr20_6030468_+ncRNA_intronic
CAediting_1405254chr20_6030473_+ncRNA_intronic
CAediting_1405255chr20_6030494_+ncRNA_intronic
CAediting_1405256chr20_6030498_+ncRNA_intronic
CAediting_1405257chr20_6030513_+ncRNA_intronic
CAediting_1405258chr20_6030522_+ncRNA_intronic
CAediting_1405259chr20_6030527_+ncRNA_intronic
CAediting_1405260chr20_6030531_+ncRNA_intronic
CAediting_1405261chr20_6030537_+ncRNA_intronic
CAediting_1405262chr20_6030545_+ncRNA_intronic
CAediting_1405263chr20_6030546_+ncRNA_intronic
CAediting_1405264chr20_6030547_+ncRNA_intronic
CAediting_1405265chr20_6030558_+ncRNA_intronic
CAediting_1405266chr20_6030560_+ncRNA_intronic
CAediting_1405267chr20_6030561_+ncRNA_intronic
CAediting_1405268chr20_6030563_+ncRNA_intronic
CAediting_1405269chr20_6030564_+ncRNA_intronic
CAediting_1405270chr20_6030566_+ncRNA_intronic
CAediting_1405271chr20_6030575_+ncRNA_intronic
CAediting_1405272chr20_6030579_+ncRNA_intronic
CAediting_1405273chr20_6030603_+ncRNA_intronic
CAediting_1405274chr20_6030607_+ncRNA_intronic
CAediting_1405275chr20_6030627_+ncRNA_intronic
CAediting_1405276chr20_6030652_+ncRNA_intronic
CAediting_1405277chr20_6030653_+ncRNA_intronic
CAediting_1405278chr20_6030660_+ncRNA_intronic
CAediting_1405279chr20_6030679_+ncRNA_intronic
CAediting_1405280chr20_6030702_+ncRNA_intronic
CAediting_1405281chr20_6030706_+ncRNA_intronic
CAediting_1405282chr20_6030707_+ncRNA_intronic
CAediting_1405283chr20_6035954_+ncRNA_intronic
CAediting_1405284chr20_6035971_+ncRNA_intronic
CAediting_1405285chr20_6036066_+ncRNA_intronic
CAediting_1405286chr20_6036118_+ncRNA_intronic
CAediting_1405287chr20_6036159_+ncRNA_intronic
CAediting_1405288chr20_6036233_+ncRNA_intronic
CAediting_1405289chr20_6037183_+ncRNA_exonic
CAediting_1405290chr20_6037702_+UTR3
CAediting_1405291chr20_6037818_+UTR3
CAediting_1405292chr20_6037872_+UTR3
CAediting_1405293chr20_6037975_+UTR3
CAediting_1405294chr20_6038010_+UTR3
CAediting_1405295chr20_6039214_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1405152chr20_6010852_+SINEAluAluJr4
CAediting_1405153chr20_6010858_+SINEAluAluJr4
CAediting_1405154chr20_6010866_+SINEAluAluJr4
CAediting_1405155chr20_6010870_+SINEAluAluJr4
CAediting_1405156chr20_6010896_+SINEAluAluJr4
CAediting_1405157chr20_6010902_+SINEAluAluJr4
CAediting_1405158chr20_6010910_+SINEAluAluJr4
CAediting_1405159chr20_6010923_+SINEAluAluJr4
CAediting_1405160chr20_6010937_+SINEAluAluJr4
CAediting_1405161chr20_6013288_+SINEAluFLAM_A
CAediting_1405162chr20_6017023_+SINEAluAluJb
CAediting_1405163chr20_6017035_+SINEAluAluJb
CAediting_1405164chr20_6017042_+SINEAluAluJb
CAediting_1405165chr20_6017047_+SINEAluAluJb
CAediting_1405166chr20_6017061_+SINEAluAluJb
CAediting_1405167chr20_6017091_+SINEAluAluJb
CAediting_1405168chr20_6017944_+SINEAluAluSz6
CAediting_1405169chr20_6017946_+SINEAluAluSz6
CAediting_1405170chr20_6017962_+SINEAluAluSz6
CAediting_1405171chr20_6017963_+SINEAluAluSz6
CAediting_1405172chr20_6017971_+SINEAluAluSz6
CAediting_1405173chr20_6017998_+SINEAluAluSz6
CAediting_1405174chr20_6018008_+SINEAluAluSz6
CAediting_1405175chr20_6018016_+SINEAluAluSz6
CAediting_1405176chr20_6018017_+SINEAluAluSz6
CAediting_1405177chr20_6018019_+SINEAluAluSz6
CAediting_1405178chr20_6018022_+SINEAluAluSz6
CAediting_1405179chr20_6018031_+SINEAluAluSz6
CAediting_1405180chr20_6018032_+SINEAluAluSz6
CAediting_1405181chr20_6018034_+SINEAluAluSz6
CAediting_1405182chr20_6018040_+SINEAluAluSz6
CAediting_1405183chr20_6018041_+SINEAluAluSz6
CAediting_1405184chr20_6018042_+SINEAluAluSz6
CAediting_1405185chr20_6018051_+SINEAluAluSz6
CAediting_1405186chr20_6018054_+SINEAluAluSz6
CAediting_1405187chr20_6018055_+SINEAluAluSz6
CAediting_1405188chr20_6018056_+SINEAluAluSz6
CAediting_1405189chr20_6018057_+SINEAluAluSz6
CAediting_1405190chr20_6018058_+SINEAluAluSz6
CAediting_1405191chr20_6018060_+SINEAluAluSz6
CAediting_1405192chr20_6018069_+SINEAluAluSz6
CAediting_1405193chr20_6018085_+SINEAluAluSz6
CAediting_1405194chr20_6018095_+SINEAluAluSz6
CAediting_1405195chr20_6018096_+SINEAluAluSz6
CAediting_1405196chr20_6018101_+SINEAluAluSz6
CAediting_1405197chr20_6018105_+SINEAluAluSz6
CAediting_1405198chr20_6018109_+SINEAluAluSz6
CAediting_1405199chr20_6018112_+SINEAluAluSz6
CAediting_1405200chr20_6018128_+SINEAluAluSz6
CAediting_1405201chr20_6018130_+SINEAluAluSz6
CAediting_1405202chr20_6018136_+SINEAluAluSz6
CAediting_1405203chr20_6018137_+SINEAluAluSz6
CAediting_1405204chr20_6018144_+SINEAluAluSz6
CAediting_1405205chr20_6018148_+SINEAluAluSz6
CAediting_1405206chr20_6018157_+SINEAluAluSz6
CAediting_1405207chr20_6018161_+SINEAluAluSz6
CAediting_1405208chr20_6018166_+SINEAluAluSz6
CAediting_1405209chr20_6018173_+SINEAluAluSz6
CAediting_1405210chr20_6018176_+SINEAluAluSz6
CAediting_1405211chr20_6018192_+SINEAluAluSz6
CAediting_1405212chr20_6019731_+SINEAluAluSx
CAediting_1405213chr20_6019791_+SINEAluAluSx
CAediting_1405214chr20_6019801_+SINEAluAluSx
CAediting_1405215chr20_6019827_+SINEAluAluSx
CAediting_1405216chr20_6019844_+SINEAluAluSx
CAediting_1405217chr20_6019847_+SINEAluAluSx
CAediting_1405218chr20_6019886_+SINEAluAluSx
CAediting_1405219chr20_6019944_+SINEAluAluSx
CAediting_1405220chr20_6021115_+SINEAluAluSz
CAediting_1405221chr20_6021179_+SINEAluAluSz
CAediting_1405222chr20_6021206_+SINEAluAluSz
CAediting_1405223chr20_6021264_+SINEAluAluSz
CAediting_1405224chr20_6022451_+SINEAluAluJb
CAediting_1405225chr20_6022560_+SINEAluAluJb
CAediting_1405226chr20_6023996_+SINEAluAluJb
CAediting_1405227chr20_6024137_+SINEAluAluJb
CAediting_1405228chr20_6024139_+SINEAluAluJb
CAediting_1405229chr20_6024166_+SINEAluAluJb
CAediting_1405230chr20_6027233_+SINEAluAluSx1
CAediting_1405231chr20_6027268_+SINEAluAluSx1
CAediting_1405232chr20_6027375_+SINEAluAluSx1
CAediting_1405233chr20_6027459_+SINEAluAluSz6
CAediting_1405234chr20_6027556_+SINEAluAluSz6
CAediting_1405235chr20_6027564_+SINEAluAluSz6
CAediting_1405236chr20_6027600_+SINEAluAluSz6
CAediting_1405237chr20_6027604_+SINEAluAluSz6
CAediting_1405238chr20_6027650_+SINEAluAluSz6
CAediting_1405239chr20_6027654_+SINEAluAluSz6
CAediting_1405240chr20_6027667_+SINEAluAluSz6
CAediting_1405241chr20_6029395_+SINEAluAluSp
CAediting_1405242chr20_6029421_+SINEAluAluSp
CAediting_1405243chr20_6029426_+SINEAluAluSp
CAediting_1405244chr20_6029429_+SINEAluAluSp
CAediting_1405245chr20_6029479_+SINEAluAluSp
CAediting_1405246chr20_6029489_+SINEAluAluSp
CAediting_1405247chr20_6029491_+SINEAluAluSp
CAediting_1405248chr20_6029542_+SINEAluAluSp
CAediting_1405249chr20_6029619_+SINEAluAluSp
CAediting_1405250chr20_6029620_+SINEAluAluSp
CAediting_1405251chr20_6030451_+SINEAluAluJb
CAediting_1405252chr20_6030452_+SINEAluAluJb
CAediting_1405253chr20_6030468_+SINEAluAluJb
CAediting_1405254chr20_6030473_+SINEAluAluJb
CAediting_1405255chr20_6030494_+SINEAluAluJb
CAediting_1405256chr20_6030498_+SINEAluAluJb
CAediting_1405257chr20_6030513_+SINEAluAluJb
CAediting_1405258chr20_6030522_+SINEAluAluJb
CAediting_1405259chr20_6030527_+SINEAluAluJb
CAediting_1405260chr20_6030531_+SINEAluAluJb
CAediting_1405261chr20_6030537_+SINEAluAluJb
CAediting_1405262chr20_6030545_+SINEAluAluJb
CAediting_1405263chr20_6030546_+SINEAluAluJb
CAediting_1405264chr20_6030547_+SINEAluAluJb
CAediting_1405265chr20_6030558_+SINEAluAluJb
CAediting_1405266chr20_6030560_+SINEAluAluJb
CAediting_1405267chr20_6030561_+SINEAluAluJb
CAediting_1405268chr20_6030563_+SINEAluAluJb
CAediting_1405269chr20_6030564_+SINEAluAluJb
CAediting_1405270chr20_6030566_+SINEAluAluJb
CAediting_1405271chr20_6030575_+SINEAluAluJb
CAediting_1405272chr20_6030579_+SINEAluAluJb
CAediting_1405273chr20_6030603_+SINEAluAluJb
CAediting_1405274chr20_6030607_+SINEAluAluJb
CAediting_1405275chr20_6030627_+SINEAluAluJb
CAediting_1405276chr20_6030652_+SINEAluAluJb
CAediting_1405277chr20_6030653_+SINEAluAluJb
CAediting_1405278chr20_6030660_+SINEAluAluJb
CAediting_1405279chr20_6030679_+SINEAluAluJb
CAediting_1405280chr20_6030702_+SINEAluAluJb
CAediting_1405281chr20_6030706_+SINEAluAluJb
CAediting_1405282chr20_6030707_+SINEAluAluJb
CAediting_1405283chr20_6035954_+SINEAluAluSx1
CAediting_1405284chr20_6035971_+SINEAluAluSx1
CAediting_1405285chr20_6036066_+SINEAluAluSx1
CAediting_1405286chr20_6036118_+SINEAluAluJr
CAediting_1405287chr20_6036159_+SINEAluAluJr
CAediting_1405288chr20_6036233_+SINEAluAluJr
CAediting_1405295chr20_6039214_+SINEAluFRAM

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RNA A-to-I editing events in the alternative splicing sites for CRLS1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000088766.10.CRLS1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000088766.10.CRLS1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CRLS1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CRLS1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CRLS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1405293chr20_6037975_+ENSG00000088766.10ENST00000452938hsa-miR-4780603797060379767mer-m860379566037977141.00-17.63
CAediting_1405293chr20_6037975_+ENSG00000088766.10ENST00000378863hsa-miR-4780603797060379767mer-m860379566037977141.00-17.63
CAediting_1405294chr20_6038010_+ENSG00000088766.10ENST00000452938hsa-miR-3065-5p603800360380108mer-1a60379896038010146.00-10.05
CAediting_1405294chr20_6038010_+ENSG00000088766.10ENST00000452938hsa-miR-7159-5p603800460380107mer-m860379926038011149.00-16.37
CAediting_1405294chr20_6038010_+ENSG00000088766.10ENST00000378863hsa-miR-3065-5p603800360380108mer-1a60379896038010146.00-10.05
CAediting_1405294chr20_6038010_+ENSG00000088766.10ENST00000378863hsa-miR-7159-5p603800460380107mer-m860379926038011149.00-16.37
CAediting_1405295chr20_6039214_+ENSG00000088766.10ENST00000452938hsa-miR-204-3p603920760392137mer-m860391946039214151.00-18.79
CAediting_1405295chr20_6039214_+ENSG00000088766.10ENST00000452938hsa-miR-3192-5p603920860392136mer60391956039214144.00-26.68
CAediting_1405295chr20_6039214_+ENSG00000088766.10ENST00000452938hsa-miR-6852-5p603920960392146mer60391956039215148.00-27.19
CAediting_1405295chr20_6039214_+ENSG00000088766.10ENST00000378863hsa-miR-204-3p603920760392137mer-m860391946039214151.00-18.79
CAediting_1405295chr20_6039214_+ENSG00000088766.10ENST00000378863hsa-miR-3192-5p603920860392136mer60391956039214144.00-26.68
CAediting_1405295chr20_6039214_+ENSG00000088766.10ENST00000378863hsa-miR-6852-5p603920960392146mer60391956039215148.00-27.19
CAediting_1405289chr20_6037183_+ENSG00000088766.10ENST00000452938hsa-miR-670-3p603718160371877mer-m860371686037188151.00-16.31
CAediting_1405289chr20_6037183_+ENSG00000088766.10ENST00000378863hsa-miR-670-3p603718160371877mer-m860371686037188151.00-16.31
CAediting_1405289chr20_6037183_+ENSG00000088766.10ENST00000378868hsa-miR-670-3p603718160371877mer-m860371686037188151.00-16.31

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1405295chr20_6039214_+ENSG00000088766.10ENST00000452938hsa-miR-12126603920960392168mer-1a60391936039216155-13.95
CAediting_1405290chr20_6037702_+ENSG00000088766.10ENST00000452938hsa-miR-153-5p603769760377037mer-m860376836037704144-5.53
CAediting_1405295chr20_6039214_+ENSG00000088766.10ENST00000452938hsa-miR-450a-1-3p603920760392137mer-m860391936039214140-9.54
CAediting_1405294chr20_6038010_+ENSG00000088766.10ENST00000452938hsa-miR-4804-3p603800660380138mer-1a60379936038013140-9.21
CAediting_1405293chr20_6037975_+ENSG00000088766.10ENST00000452938hsa-miR-6782-3p603797160379777mer-m860379566037978140-9.34
CAediting_1405295chr20_6039214_+ENSG00000088766.10ENST00000378863hsa-miR-12126603920960392168mer-1a60391936039216155-13.95
CAediting_1405290chr20_6037702_+ENSG00000088766.10ENST00000378863hsa-miR-153-5p603769760377037mer-m860376836037704144-5.53
CAediting_1405295chr20_6039214_+ENSG00000088766.10ENST00000378863hsa-miR-450a-1-3p603920760392137mer-m860391936039214140-9.54
CAediting_1405294chr20_6038010_+ENSG00000088766.10ENST00000378863hsa-miR-4804-3p603800660380138mer-1a60379936038013140-9.21
CAediting_1405293chr20_6037975_+ENSG00000088766.10ENST00000378863hsa-miR-6782-3p603797160379777mer-m860379566037978140-9.34

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000088766.10ENST00000452938hsa-miR-200b-3p603453160345377mer-m860345156034538149-12.1
CAediting_1054808chr15_66496985_-ENSG00000088766.10ENST00000452938hsa-miR-4512603971760397237mer-1a60397026039723146-28.18
CAediting_117844chr1_162342605_+ENSG00000088766.10ENST00000452938hsa-miR-556-3p603757160375777mer-m860375576037578140-9.51
CAediting_1054808chr15_66496985_-ENSG00000088766.10ENST00000378863hsa-miR-4512603971760397237mer-1a60397026039723146-28.18
CAediting_117844chr1_162342605_+ENSG00000088766.10ENST00000378863hsa-miR-556-3p603757160375777mer-m860375576037578140-9.51

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573000chr7_92204081_-ENSG00000088766.10ENST00000452938hsa-miR-1285-5p603834260383487mer-m860383286038349150-16.31
CAediting_573000chr7_92204081_-ENSG00000088766.10ENST00000452938hsa-miR-1285-5p603978460397907mer-m860397716039791146-7.97
CAediting_77128chr1_85133844_+ENSG00000088766.10ENST00000452938hsa-miR-4423-3p603777560377828mer-1a60377626037782151-14.3
CAediting_414656chr5_72878640_+ENSG00000088766.10ENST00000452938hsa-miR-4804-3p603800660380138mer-1a60379936038013140-9.21
CAediting_1524209chrX_134546392_-ENSG00000088766.10ENST00000452938hsa-miR-503-5p603826860382736mer60382536038277151-24.01
CAediting_1524209chrX_134546392_-ENSG00000088766.10ENST00000452938hsa-miR-503-5p603827160382766mer60382536038277151-24.01
CAediting_1229413chr17_67471544_+ENSG00000088766.10ENST00000452938hsa-miR-548aa603830860383158mer-1a60382916038315140-7.74
CAediting_1229414chr17_67471546_+ENSG00000088766.10ENST00000452938hsa-miR-548aa603830860383158mer-1a60382916038315140-7.74
CAediting_1229415chr17_67471547_+ENSG00000088766.10ENST00000452938hsa-miR-548aa603830860383158mer-1a60382916038315140-7.74
CAediting_228905chr2_188297554_+ENSG00000088766.10ENST00000452938hsa-miR-561-3p603875960387646mer60387446038765144-12.57
CAediting_573000chr7_92204081_-ENSG00000088766.10ENST00000378863hsa-miR-1285-5p603834260383487mer-m860383286038349150-16.31
CAediting_573000chr7_92204081_-ENSG00000088766.10ENST00000378863hsa-miR-1285-5p603978460397907mer-m860397716039791146-7.97
CAediting_77128chr1_85133844_+ENSG00000088766.10ENST00000378863hsa-miR-4423-3p603777560377828mer-1a60377626037782151-14.3
CAediting_414656chr5_72878640_+ENSG00000088766.10ENST00000378863hsa-miR-4804-3p603800660380138mer-1a60379936038013140-9.21
CAediting_1524209chrX_134546392_-ENSG00000088766.10ENST00000378863hsa-miR-503-5p603826860382736mer60382536038277151-24.01
CAediting_1524209chrX_134546392_-ENSG00000088766.10ENST00000378863hsa-miR-503-5p603827160382766mer60382536038277151-24.01
CAediting_1229413chr17_67471544_+ENSG00000088766.10ENST00000378863hsa-miR-548aa603830860383158mer-1a60382916038315140-7.74
CAediting_1229414chr17_67471546_+ENSG00000088766.10ENST00000378863hsa-miR-548aa603830860383158mer-1a60382916038315140-7.74
CAediting_1229415chr17_67471547_+ENSG00000088766.10ENST00000378863hsa-miR-548aa603830860383158mer-1a60382916038315140-7.74
CAediting_228905chr2_188297554_+ENSG00000088766.10ENST00000378863hsa-miR-561-3p603875960387646mer60387446038765144-12.57

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CRLS1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CRLS1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for CRLS1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
ESCApathologic_stageCAediting_1405175chr20_6018016_+0.01521335942605130.331815916840246

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Relation with survival for CRLS1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for CRLS1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CRLS1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource