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Editing gene: GNL3L (CAeditome ID:54552)

Gene summary for GNL3L

Gene summary

Gene information	Gene symbol	GNL3L
	Gene ID	54552
	Gene name	G protein nucleolar 3 like
	Synonyms	GNL3B
	Cytomap	Xp11.22
	Type of gene	protein-coding
	Description	guanine nucleotide-binding protein-like 3-like proteinG protein nucleolar 3Bguanine nucleotide binding protein-like 3 (nucleolar)-likenovel GTPase
	Modification date	20210518
	UniProtAcc	Q9NVN8
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
GNL3L	GO:0031647	Guanine nucleotide-binding protein-like 3-like protein	19487455
GNL3L	GO:0032091	Guanine nucleotide-binding protein-like 3-like protein	19487455
GNL3L	GO:1904816	Guanine nucleotide-binding protein-like 3-like protein	19487455
GNL3L	GO:0005654	Guanine nucleotide-binding protein-like 3-like protein	0000052
GNL3L	GO:0005730	Guanine nucleotide-binding protein-like 3-like protein	0000052
GNL3L	GO:0005730	Guanine nucleotide-binding protein-like 3-like protein	18082603
GNL3L	GO:0005829	Guanine nucleotide-binding protein-like 3-like protein	0000052
GNL3L	GO:0005697	Guanine nucleotide-binding protein-like 3-like protein	18082603

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RNA A-to-I events for GNL3L

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000130119.14

RNA A-to-I editing events in Cancer.

CAediting_1508947(54533288, +), CAediting_1508948(54535784, +), CAediting_1508949(54536311, +), CAediting_1508950(54536312, +), CAediting_1508951(54557102, +), CAediting_1508952(54557103, +), CAediting_1508953(54557107, +), CAediting_1508954(54558837, +), CAediting_1508955(54558857, +), CAediting_1508956(54558866, +), CAediting_1508957(54560777, +), CAediting_1508958(54560785, +), CAediting_1508959(54560786, +), CAediting_1508960(54560791, +), CAediting_1508961(54560802, +), CAediting_1508962(54560808, +), CAediting_1508963(54560826, +), CAediting_1508964(54560831, +), CAediting_1508965(54560834, +), CAediting_1508966(54560840, +), CAediting_1508967(54560842, +), CAediting_1508968(54560845, +), CAediting_1508969(54560854, +), CAediting_1508970(54560857, +), CAediting_1508971(54560863, +), CAediting_1508972(54560864, +), CAediting_1508973(54560865, +), CAediting_1508974(54560876, +), CAediting_1508975(54560879, +), CAediting_1508976(54560880, +), CAediting_1508977(54560881, +), CAediting_1508978(54560882, +), CAediting_1508979(54560885, +), CAediting_1508980(54560887, +), CAediting_1508981(54560888, +), CAediting_1508982(54560889, +), CAediting_1508983(54560890, +), CAediting_1508984(54560892, +), CAediting_1508985(54560913, +), CAediting_1508986(54560919, +), CAediting_1508987(54560925, +), CAediting_1508988(54560929, +), CAediting_1508989(54560936, +), CAediting_1508990(54560942, +), CAediting_1508991(54560946, +), CAediting_1508992(54560949, +), CAediting_1508993(54560951, +), CAediting_1508994(54560952, +), CAediting_1508995(54560961, +), CAediting_1508996(54560970, +), CAediting_1508997(54560973, +), CAediting_1508998(54560974, +), CAediting_1508999(54560978, +), CAediting_1509000(54560981, +), CAediting_1509001(54560983, +), CAediting_1509002(54560984, +), CAediting_1509003(54560992, +), CAediting_1509004(54560993, +), CAediting_1509005(54561000, +), CAediting_1509006(54561004, +), CAediting_1509007(54561006, +), CAediting_1509008(54561013, +), CAediting_1509009(54561017, +), CAediting_1509010(54561022, +), CAediting_1509011(54561024, +), CAediting_1509012(54561029, +), CAediting_1509013(54561032, +), CAediting_1509014(54561037, +), CAediting_1509015(54561042, +), CAediting_1509016(54561051, +), CAediting_1509017(54561052, +), CAediting_1509018(54561055, +), CAediting_1509019(54561061, +), CAediting_1509020(54561062, +),

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RNA editing positional annotations for GNL3L using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1508947	chrX_54533288_+	ncRNA_intronic
CAediting_1508948	chrX_54535784_+	ncRNA_intronic
CAediting_1508949	chrX_54536311_+	ncRNA_intronic
CAediting_1508950	chrX_54536312_+	ncRNA_intronic
CAediting_1508951	chrX_54557102_+	intronic
CAediting_1508952	chrX_54557103_+	intronic
CAediting_1508953	chrX_54557107_+	intronic
CAediting_1508954	chrX_54558837_+	intronic
CAediting_1508955	chrX_54558857_+	intronic
CAediting_1508956	chrX_54558866_+	intronic
CAediting_1508957	chrX_54560777_+	UTR3
CAediting_1508958	chrX_54560785_+	UTR3
CAediting_1508959	chrX_54560786_+	UTR3
CAediting_1508960	chrX_54560791_+	UTR3
CAediting_1508961	chrX_54560802_+	UTR3
CAediting_1508962	chrX_54560808_+	UTR3
CAediting_1508963	chrX_54560826_+	UTR3
CAediting_1508964	chrX_54560831_+	UTR3
CAediting_1508965	chrX_54560834_+	UTR3
CAediting_1508966	chrX_54560840_+	UTR3
CAediting_1508967	chrX_54560842_+	UTR3
CAediting_1508968	chrX_54560845_+	UTR3
CAediting_1508969	chrX_54560854_+	UTR3
CAediting_1508970	chrX_54560857_+	UTR3
CAediting_1508971	chrX_54560863_+	UTR3
CAediting_1508972	chrX_54560864_+	UTR3
CAediting_1508973	chrX_54560865_+	UTR3
CAediting_1508974	chrX_54560876_+	UTR3
CAediting_1508975	chrX_54560879_+	UTR3
CAediting_1508976	chrX_54560880_+	UTR3
CAediting_1508977	chrX_54560881_+	UTR3
CAediting_1508978	chrX_54560882_+	UTR3
CAediting_1508979	chrX_54560885_+	UTR3
CAediting_1508980	chrX_54560887_+	UTR3
CAediting_1508981	chrX_54560888_+	UTR3
CAediting_1508982	chrX_54560889_+	UTR3
CAediting_1508983	chrX_54560890_+	UTR3
CAediting_1508984	chrX_54560892_+	UTR3
CAediting_1508985	chrX_54560913_+	UTR3
CAediting_1508986	chrX_54560919_+	UTR3
CAediting_1508987	chrX_54560925_+	UTR3
CAediting_1508988	chrX_54560929_+	UTR3
CAediting_1508989	chrX_54560936_+	UTR3
CAediting_1508990	chrX_54560942_+	UTR3
CAediting_1508991	chrX_54560946_+	UTR3
CAediting_1508992	chrX_54560949_+	UTR3
CAediting_1508993	chrX_54560951_+	UTR3
CAediting_1508994	chrX_54560952_+	UTR3
CAediting_1508995	chrX_54560961_+	UTR3
CAediting_1508996	chrX_54560970_+	UTR3
CAediting_1508997	chrX_54560973_+	UTR3
CAediting_1508998	chrX_54560974_+	UTR3
CAediting_1508999	chrX_54560978_+	UTR3
CAediting_1509000	chrX_54560981_+	UTR3
CAediting_1509001	chrX_54560983_+	UTR3
CAediting_1509002	chrX_54560984_+	UTR3
CAediting_1509003	chrX_54560992_+	UTR3
CAediting_1509004	chrX_54560993_+	UTR3
CAediting_1509005	chrX_54561000_+	UTR3
CAediting_1509006	chrX_54561004_+	UTR3
CAediting_1509007	chrX_54561006_+	UTR3
CAediting_1509008	chrX_54561013_+	UTR3
CAediting_1509009	chrX_54561017_+	UTR3
CAediting_1509010	chrX_54561022_+	UTR3
CAediting_1509011	chrX_54561024_+	UTR3
CAediting_1509012	chrX_54561029_+	UTR3
CAediting_1509013	chrX_54561032_+	UTR3
CAediting_1509014	chrX_54561037_+	UTR3
CAediting_1509015	chrX_54561042_+	UTR3
CAediting_1509016	chrX_54561051_+	UTR3
CAediting_1509017	chrX_54561052_+	UTR3
CAediting_1509018	chrX_54561055_+	UTR3
CAediting_1509019	chrX_54561061_+	UTR3
CAediting_1509020	chrX_54561062_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1508947	chrX_54533288_+	SINE	Alu	AluSx
CAediting_1508948	chrX_54535784_+	SINE	Alu	AluSz
CAediting_1508949	chrX_54536311_+	SINE	Alu	AluSz
CAediting_1508950	chrX_54536312_+	SINE	Alu	AluSz
CAediting_1508951	chrX_54557102_+	SINE	Alu	AluSx
CAediting_1508952	chrX_54557103_+	SINE	Alu	AluSx
CAediting_1508953	chrX_54557107_+	SINE	Alu	AluSx
CAediting_1508954	chrX_54558837_+	SINE	Alu	AluSx1
CAediting_1508955	chrX_54558857_+	SINE	Alu	AluSx1
CAediting_1508956	chrX_54558866_+	SINE	Alu	AluSx1
CAediting_1508957	chrX_54560777_+	SINE	Alu	AluSq2
CAediting_1508958	chrX_54560785_+	SINE	Alu	AluSq2
CAediting_1508959	chrX_54560786_+	SINE	Alu	AluSq2
CAediting_1508960	chrX_54560791_+	SINE	Alu	AluSq2
CAediting_1508961	chrX_54560802_+	SINE	Alu	AluSq2
CAediting_1508962	chrX_54560808_+	SINE	Alu	AluSq2
CAediting_1508963	chrX_54560826_+	SINE	Alu	AluSq2
CAediting_1508964	chrX_54560831_+	SINE	Alu	AluSq2
CAediting_1508965	chrX_54560834_+	SINE	Alu	AluSq2
CAediting_1508966	chrX_54560840_+	SINE	Alu	AluSq2
CAediting_1508967	chrX_54560842_+	SINE	Alu	AluSq2
CAediting_1508968	chrX_54560845_+	SINE	Alu	AluSq2
CAediting_1508969	chrX_54560854_+	SINE	Alu	AluSq2
CAediting_1508970	chrX_54560857_+	SINE	Alu	AluSq2
CAediting_1508971	chrX_54560863_+	SINE	Alu	AluSq2
CAediting_1508972	chrX_54560864_+	SINE	Alu	AluSq2
CAediting_1508973	chrX_54560865_+	SINE	Alu	AluSq2
CAediting_1508974	chrX_54560876_+	SINE	Alu	AluSq2
CAediting_1508975	chrX_54560879_+	SINE	Alu	AluSq2
CAediting_1508976	chrX_54560880_+	SINE	Alu	AluSq2
CAediting_1508977	chrX_54560881_+	SINE	Alu	AluSq2
CAediting_1508978	chrX_54560882_+	SINE	Alu	AluSq2
CAediting_1508979	chrX_54560885_+	SINE	Alu	AluSq2
CAediting_1508980	chrX_54560887_+	SINE	Alu	AluSq2
CAediting_1508981	chrX_54560888_+	SINE	Alu	AluSq2
CAediting_1508982	chrX_54560889_+	SINE	Alu	AluSq2
CAediting_1508983	chrX_54560890_+	SINE	Alu	AluSq2
CAediting_1508984	chrX_54560892_+	SINE	Alu	AluSq2
CAediting_1508985	chrX_54560913_+	SINE	Alu	AluSq2
CAediting_1508986	chrX_54560919_+	SINE	Alu	AluSq2
CAediting_1508987	chrX_54560925_+	SINE	Alu	AluSq2
CAediting_1508988	chrX_54560929_+	SINE	Alu	AluSq2
CAediting_1508989	chrX_54560936_+	SINE	Alu	AluSq2
CAediting_1508990	chrX_54560942_+	SINE	Alu	AluSq2
CAediting_1508991	chrX_54560946_+	SINE	Alu	AluSq2
CAediting_1508992	chrX_54560949_+	SINE	Alu	AluSq2
CAediting_1508993	chrX_54560951_+	SINE	Alu	AluSq2
CAediting_1508994	chrX_54560952_+	SINE	Alu	AluSq2
CAediting_1508995	chrX_54560961_+	SINE	Alu	AluSq2
CAediting_1508996	chrX_54560970_+	SINE	Alu	AluSq2
CAediting_1508997	chrX_54560973_+	SINE	Alu	AluSq2
CAediting_1508998	chrX_54560974_+	SINE	Alu	AluSq2
CAediting_1508999	chrX_54560978_+	SINE	Alu	AluSq2
CAediting_1509000	chrX_54560981_+	SINE	Alu	AluSq2
CAediting_1509001	chrX_54560983_+	SINE	Alu	AluSq2
CAediting_1509002	chrX_54560984_+	SINE	Alu	AluSq2
CAediting_1509003	chrX_54560992_+	SINE	Alu	AluSq2
CAediting_1509004	chrX_54560993_+	SINE	Alu	AluSq2
CAediting_1509005	chrX_54561000_+	SINE	Alu	AluSq2
CAediting_1509006	chrX_54561004_+	SINE	Alu	AluSq2
CAediting_1509007	chrX_54561006_+	SINE	Alu	AluSq2
CAediting_1509008	chrX_54561013_+	SINE	Alu	AluSq2
CAediting_1509009	chrX_54561017_+	SINE	Alu	AluSq2
CAediting_1509010	chrX_54561022_+	SINE	Alu	AluSq2
CAediting_1509011	chrX_54561024_+	SINE	Alu	AluSq2
CAediting_1509012	chrX_54561029_+	SINE	Alu	AluSq2
CAediting_1509013	chrX_54561032_+	SINE	Alu	AluSq2
CAediting_1509014	chrX_54561037_+	SINE	Alu	AluSq2
CAediting_1509015	chrX_54561042_+	SINE	Alu	AluSq2
CAediting_1509016	chrX_54561051_+	SINE	Alu	AluSq2
CAediting_1509017	chrX_54561052_+	SINE	Alu	AluSq2
CAediting_1509018	chrX_54561055_+	SINE	Alu	AluSq2
CAediting_1509019	chrX_54561061_+	SINE	Alu	AluSq2
CAediting_1509020	chrX_54561062_+	SINE	Alu	AluSq2

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RNA A-to-I editing events in the alternative splicing sites for GNL3L

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000130119.14.GNL3L.

Correlation between RNA A-to-I editing and PSI for ENSG00000130119.14.GNL3L.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GNL3L

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

KIRP.CAediting_1508986.ENSG00000130119.GNL3L.png
Soverview

KIRP.CAediting_1509003.ENSG00000130119.GNL3L.png
Soverview

LIHC.CAediting_1509003.ENSG00000130119.GNL3L.png
Soverview

LUAD.CAediting_1509003.ENSG00000130119.GNL3L.png
Soverview

PAAD.CAediting_1509003.ENSG00000130119.GNL3L.png
Soverview

SARC.CAediting_1508986.ENSG00000130119.GNL3L.png
Soverview

TGCT.CAediting_1509003.ENSG00000130119.GNL3L.png
Soverview

UCEC.CAediting_1508986.ENSG00000130119.GNL3L.png
Soverview

UCEC.CAediting_1509003.ENSG00000130119.GNL3L.png
Soverview

UCS.CAediting_1509003.ENSG00000130119.GNL3L.png
Soverview

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Protein coding region RNA A-to-I editings for GNL3L

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for GNL3L

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1508958	chrX_54560785_+	ENSG00000130119.14	ENST00000336470	hsa-miR-638	54560784	54560790	7mer-1a	54560764	54560790	154.00	-34.83
CAediting_1508959	chrX_54560786_+	ENSG00000130119.14	ENST00000336470	hsa-miR-8052	54560784	54560790	7mer-1a	54560769	54560790	142.00	-25.78
CAediting_1508960	chrX_54560791_+	ENSG00000130119.14	ENST00000336470	hsa-miR-371a-3p	54560789	54560795	7mer-m8	54560774	54560796	146.00	-17.31
CAediting_1508971	chrX_54560863_+	ENSG00000130119.14	ENST00000336470	hsa-miR-23a-5p	54560861	54560867	7mer-m8	54560846	54560868	144.00	-21.43
CAediting_1508971	chrX_54560863_+	ENSG00000130119.14	ENST00000336470	hsa-miR-23b-5p	54560861	54560867	7mer-m8	54560848	54560868	156.00	-19.96
CAediting_1508972	chrX_54560864_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1229-3p	54560858	54560864	7mer-m8	54560841	54560865	146.00	-16.14
CAediting_1508972	chrX_54560864_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511a-3p	54560857	54560864	8mer-1a	54560843	54560864	145.00	-15.78
CAediting_1508972	chrX_54560864_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511a-3p	54560857	54560864	8mer-1a	54560843	54560864	145.00	-15.78
CAediting_1508972	chrX_54560864_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511a-3p	54560857	54560864	8mer-1a	54560843	54560864	145.00	-15.78
CAediting_1508972	chrX_54560864_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511a-3p	54560857	54560864	8mer-1a	54560843	54560864	145.00	-15.78
CAediting_1508972	chrX_54560864_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511b-3p	54560857	54560864	8mer-1a	54560842	54560864	140.00	-14.97
CAediting_1508972	chrX_54560864_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511b-3p	54560857	54560864	8mer-1a	54560842	54560864	140.00	-14.97
CAediting_1508973	chrX_54560865_+	ENSG00000130119.14	ENST00000336470	hsa-miR-412-3p	54560858	54560864	7mer-m8	54560843	54560865	153.00	-17.30
CAediting_1508973	chrX_54560865_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4508	54560863	54560869	7mer-m8	54560854	54560870	140.00	-21.85
CAediting_1508973	chrX_54560865_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6754-3p	54560858	54560864	7mer-m8	54560845	54560865	144.00	-15.76
CAediting_1508975	chrX_54560879_+	ENSG00000130119.14	ENST00000336470	hsa-miR-222-5p	54560873	54560880	8mer-1a	54560859	54560880	140.00	-9.13
CAediting_1508975	chrX_54560879_+	ENSG00000130119.14	ENST00000336470	hsa-miR-30a-3p	54560875	54560882	8mer-1a	54560858	54560882	150.00	-12.52
CAediting_1508975	chrX_54560879_+	ENSG00000130119.14	ENST00000336470	hsa-miR-30d-3p	54560875	54560882	8mer-1a	54560860	54560882	149.00	-12.11
CAediting_1508975	chrX_54560879_+	ENSG00000130119.14	ENST00000336470	hsa-miR-30e-3p	54560875	54560882	8mer-1a	54560858	54560882	150.00	-14.55
CAediting_1508975	chrX_54560879_+	ENSG00000130119.14	ENST00000336470	hsa-miR-936	54560872	54560879	8mer-1a	54560857	54560879	159.00	-22.47
CAediting_1508976	chrX_54560880_+	ENSG00000130119.14	ENST00000336470	hsa-miR-325	54560873	54560880	8mer-1a	54560858	54560880	141.00	-10.26
CAediting_1508979	chrX_54560885_+	ENSG00000130119.14	ENST00000336470	hsa-miR-153-5p	54560878	54560884	7mer-m8	54560863	54560885	144.00	-8.17
CAediting_1508979	chrX_54560885_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3680-3p	54560882	54560889	8mer-1a	54560867	54560889	140.00	-14.25
CAediting_1508979	chrX_54560885_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3680-3p	54560882	54560889	8mer-1a	54560867	54560889	140.00	-14.25
CAediting_1508981	chrX_54560888_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4742-3p	54560881	54560888	8mer-1a	54560866	54560888	142.00	-9.18
CAediting_1508988	chrX_54560929_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1207-3p	54560922	54560928	7mer-m8	54560912	54560929	140.00	-12.56
CAediting_1508988	chrX_54560929_+	ENSG00000130119.14	ENST00000336470	hsa-miR-646	54560924	54560930	7mer-m8	54560913	54560931	145.00	-17.22
CAediting_1508989	chrX_54560936_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3943	54560933	54560939	7mer-m8	54560920	54560940	146.00	-22.28
CAediting_1508995	chrX_54560961_+	ENSG00000130119.14	ENST00000336470	hsa-miR-24-3p	54560956	54560962	7mer-m8	54560942	54560963	140.00	-14.95
CAediting_1508995	chrX_54560961_+	ENSG00000130119.14	ENST00000336470	hsa-miR-24-3p	54560956	54560962	7mer-m8	54560942	54560963	140.00	-14.95
CAediting_1508995	chrX_54560961_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3155a	54560958	54560964	7mer-m8	54560945	54560965	142.00	-21.79
CAediting_1508995	chrX_54560961_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3155b	54560958	54560964	7mer-m8	54560948	54560965	142.00	-20.89
CAediting_1508995	chrX_54560961_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3934-3p	54560955	54560961	7mer-m8	54560941	54560962	147.00	-16.11
CAediting_1508995	chrX_54560961_+	ENSG00000130119.14	ENST00000336470	hsa-miR-484	54560958	54560964	7mer-m8	54560944	54560965	155.00	-24.84
CAediting_1508997	chrX_54560973_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4264	54560968	54560974	7mer-m8	54560959	54560975	140.00	-13.35
CAediting_1508998	chrX_54560974_+	ENSG00000130119.14	ENST00000336470	hsa-miR-18a-3p	54560972	54560978	7mer-m8	54560959	54560979	158.00	-27.36
CAediting_1508998	chrX_54560974_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3157-3p	54560971	54560977	7mer-m8	54560957	54560978	161.00	-26.23
CAediting_1509002	chrX_54560984_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4431	54560980	54560986	7mer-m8	54560966	54560987	140.00	-17.29
CAediting_1509002	chrX_54560984_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6845-3p	54560977	54560983	7mer-m8	54560962	54560984	158.00	-26.73
CAediting_1509003	chrX_54560992_+	ENSG00000130119.14	ENST00000336470	hsa-miR-9900	54560990	54560996	7mer-m8	54560978	54560997	147.00	-17.22
CAediting_1509004	chrX_54560993_+	ENSG00000130119.14	ENST00000336470	hsa-miR-24-3p	54560988	54560994	7mer-m8	54560974	54560995	140.00	-14.95
CAediting_1509004	chrX_54560993_+	ENSG00000130119.14	ENST00000336470	hsa-miR-24-3p	54560988	54560994	7mer-m8	54560974	54560995	140.00	-14.95
CAediting_1509004	chrX_54560993_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3155a	54560990	54560996	7mer-m8	54560977	54560997	142.00	-21.79
CAediting_1509004	chrX_54560993_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3155b	54560990	54560996	7mer-m8	54560980	54560997	142.00	-20.89
CAediting_1509004	chrX_54560993_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3934-3p	54560987	54560993	7mer-m8	54560973	54560994	147.00	-16.11
CAediting_1509004	chrX_54560993_+	ENSG00000130119.14	ENST00000336470	hsa-miR-484	54560990	54560996	7mer-m8	54560976	54560997	155.00	-24.84
CAediting_1509005	chrX_54561000_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1913	54560998	54561005	8mer-1a	54560985	54561005	149.00	-21.45
CAediting_1509005	chrX_54561000_+	ENSG00000130119.14	ENST00000336470	hsa-miR-361-3p	54560994	54561000	7mer-m8	54560975	54561001	165.00	-32.41
CAediting_1509006	chrX_54561004_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1281	54560997	54561003	7mer-m8	54560988	54561004	141.00	-17.01
CAediting_1509008	chrX_54561013_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511a-3p	54561012	54561017	6mer	54560997	54561018	144.00	-26.09
CAediting_1509008	chrX_54561013_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511a-3p	54561012	54561017	6mer	54560997	54561018	144.00	-26.09
CAediting_1509008	chrX_54561013_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511a-3p	54561012	54561017	6mer	54560997	54561018	144.00	-26.09
CAediting_1509008	chrX_54561013_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511a-3p	54561012	54561017	6mer	54560997	54561018	144.00	-26.09
CAediting_1509008	chrX_54561013_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511b-3p	54561012	54561017	6mer	54560996	54561018	148.00	-28.97
CAediting_1509008	chrX_54561013_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6511b-3p	54561012	54561017	6mer	54560996	54561018	148.00	-28.97
CAediting_1509008	chrX_54561013_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6784-3p	54561012	54561017	6mer	54560996	54561018	151.00	-31.20
CAediting_1509009	chrX_54561017_+	ENSG00000130119.14	ENST00000336470	hsa-miR-324-3p	54561010	54561016	7mer-m8	54560995	54561017	149.00	-24.32
CAediting_1509009	chrX_54561017_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6724-5p	54561015	54561021	7mer-m8	54561000	54561022	157.00	-31.69
CAediting_1509009	chrX_54561017_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6724-5p	54561015	54561021	7mer-m8	54561000	54561022	157.00	-31.69
CAediting_1509009	chrX_54561017_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6724-5p	54561015	54561021	7mer-m8	54561000	54561022	157.00	-31.69
CAediting_1509009	chrX_54561017_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6724-5p	54561015	54561021	7mer-m8	54561000	54561022	157.00	-31.69
CAediting_1509009	chrX_54561017_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6773-5p	54561015	54561021	7mer-m8	54561001	54561022	148.00	-20.42
CAediting_1509012	chrX_54561029_+	ENSG00000130119.14	ENST00000336470	hsa-miR-652-3p	54561026	54561032	7mer-m8	54561013	54561033	158.00	-25.65
CAediting_1509013	chrX_54561032_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1250-5p	54561026	54561031	6mer	54561014	54561032	140.00	-25.86
CAediting_1508961	chrX_54560802_+	ENSG00000130119.14	ENST00000336470	hsa-miR-10392-3p	54560800	54560807	8mer-1a	54560783	54560807	144.00	-22.69
CAediting_1508962	chrX_54560808_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4707-5p	54560803	54560809	7mer-m8	54560788	54560810	142.00	-26.95
CAediting_1508963	chrX_54560826_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4726-3p	54560820	54560826	7mer-m8	54560808	54560827	149.00	-27.37
CAediting_1508965	chrX_54560834_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4732-3p	54560827	54560833	7mer-m8	54560814	54560834	155.00	-23.59
CAediting_1508966	chrX_54560840_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4281	54560837	54560844	8mer-1a	54560827	54560844	142.00	-19.48
CAediting_1508966	chrX_54560840_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6716-3p	54560833	54560839	7mer-m8	54560821	54560840	152.00	-23.74
CAediting_1508967	chrX_54560842_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3176	54560839	54560845	7mer-m8	54560828	54560846	160.00	-25.38
CAediting_1508967	chrX_54560842_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3922-3p	54560839	54560845	7mer-m8	54560822	54560846	161.00	-28.11
CAediting_1508967	chrX_54560842_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6878-3p	54560838	54560844	7mer-m8	54560823	54560845	150.00	-24.06
CAediting_1508970	chrX_54560857_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1306-3p	54560850	54560856	7mer-m8	54560840	54560857	152.00	-23.71
CAediting_1508974	chrX_54560876_+	ENSG00000130119.14	ENST00000336470	hsa-miR-374b-3p	54560873	54560880	8mer-1a	54560858	54560880	147.00	-12.57
CAediting_1508977	chrX_54560881_+	ENSG00000130119.14	ENST00000336470	hsa-miR-630	54560879	54560886	8mer-1a	54560866	54560886	158.00	-15.14
CAediting_1508982	chrX_54560889_+	ENSG00000130119.14	ENST00000336470	hsa-miR-578	54560884	54560891	8mer-1a	54560871	54560891	148.00	-9.39
CAediting_1508982	chrX_54560889_+	ENSG00000130119.14	ENST00000336470	hsa-miR-643	54560882	54560889	8mer-1a	54560867	54560889	143.00	-11.13
CAediting_1508990	chrX_54560942_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1913	54560940	54560946	7mer-m8	54560926	54560947	147.00	-22.10
CAediting_1508990	chrX_54560942_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6849-3p	54560935	54560941	7mer-m8	54560921	54560942	140.00	-18.03
CAediting_1508992	chrX_54560949_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6752-3p	54560942	54560948	7mer-m8	54560930	54560949	157.00	-30.29
CAediting_1508992	chrX_54560949_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6801-3p	54560943	54560950	8mer-1a	54560931	54560950	148.00	-22.90
CAediting_1508992	chrX_54560949_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6810-3p	54560943	54560950	8mer-1a	54560928	54560950	151.00	-28.60
CAediting_1508993	chrX_54560951_+	ENSG00000130119.14	ENST00000336470	hsa-miR-660-3p	54560944	54560951	8mer-1a	54560932	54560951	144.00	-16.11
CAediting_1508994	chrX_54560952_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4431	54560948	54560954	7mer-m8	54560934	54560955	140.00	-17.94
CAediting_1508996	chrX_54560970_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6778-3p	54560964	54560970	7mer-m8	54560951	54560971	142.00	-15.35
CAediting_1508996	chrX_54560970_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6791-3p	54560965	54560970	6mer	54560952	54560971	149.00	-23.03
CAediting_1509000	chrX_54560981_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6752-3p	54560974	54560980	7mer-m8	54560962	54560981	149.00	-29.58
CAediting_1509000	chrX_54560981_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6801-3p	54560975	54560982	8mer-1a	54560959	54560982	148.00	-24.61
CAediting_1509000	chrX_54560981_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6810-3p	54560975	54560982	8mer-1a	54560962	54560982	154.00	-31.08
CAediting_1509001	chrX_54560983_+	ENSG00000130119.14	ENST00000336470	hsa-miR-660-3p	54560976	54560983	8mer-1a	54560963	54560983	143.00	-15.46
CAediting_1509007	chrX_54561006_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6747-3p	54560999	54561005	7mer-m8	54560986	54561006	151.00	-24.03
CAediting_1509007	chrX_54561006_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6752-3p	54561000	54561006	7mer-m8	54560986	54561007	152.00	-26.43
CAediting_1509007	chrX_54561006_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6801-3p	54561001	54561007	7mer-m8	54560989	54561008	158.00	-26.95
CAediting_1509007	chrX_54561006_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6810-3p	54561001	54561007	7mer-m8	54560985	54561008	165.00	-29.66
CAediting_1509011	chrX_54561024_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4485-5p	54561020	54561026	7mer-m8	54561010	54561027	141.00	-18.56
CAediting_1509011	chrX_54561024_+	ENSG00000130119.14	ENST00000336470	hsa-miR-661	54561018	54561024	7mer-m8	54560999	54561025	160.00	-29.49
CAediting_1509011	chrX_54561024_+	ENSG00000130119.14	ENST00000336470	hsa-miR-939-3p	54561017	54561023	7mer-m8	54561003	54561024	157.00	-25.78
CAediting_1509015	chrX_54561042_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1972	54561040	54561046	7mer-m8	54561025	54561047	161.00	-29.58
CAediting_1509015	chrX_54561042_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1972	54561040	54561046	7mer-m8	54561025	54561047	161.00	-29.58
CAediting_1509015	chrX_54561042_+	ENSG00000130119.14	ENST00000336470	hsa-miR-759	54561035	54561041	7mer-m8	54561021	54561042	155.00	-17.54
CAediting_1509018	chrX_54561055_+	ENSG00000130119.14	ENST00000336470	hsa-miR-367-5p	54561048	54561054	7mer-m8	54561028	54561055	144.00	-13.97
CAediting_1509019	chrX_54561061_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4294	54561059	54561065	7mer-m8	54561050	54561066	140.00	-12.02
CAediting_1509019	chrX_54561061_+	ENSG00000130119.14	ENST00000336470	hsa-miR-924	54561059	54561064	6mer	54561046	54561065	151.00	-21.81
CAediting_1508983	chrX_54560890_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6844	54560884	54560891	8mer-1a	54560870	54560891	155.00	-9.08

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1508958	chrX_54560785_+	ENSG00000130119.14	ENST00000336470	hsa-miR-10399-5p	54560780	54560786	7mer-m8	54560766	54560787	154	-18.01
CAediting_1508959	chrX_54560786_+	ENSG00000130119.14	ENST00000336470	hsa-miR-10399-5p	54560780	54560786	7mer-m8	54560766	54560787	154	-18.01
CAediting_1509009	chrX_54561017_+	ENSG00000130119.14	ENST00000336470	hsa-miR-10400-3p	54561015	54561021	7mer-m8	54561002	54561022	146	-20.43
CAediting_1509010	chrX_54561022_+	ENSG00000130119.14	ENST00000336470	hsa-miR-10400-3p	54561015	54561021	7mer-m8	54561002	54561022	146	-20.43
CAediting_1509013	chrX_54561032_+	ENSG00000130119.14	ENST00000336470	hsa-miR-106a-3p	54561030	54561036	7mer-m8	54561018	54561037	143	-10.66
CAediting_1509014	chrX_54561037_+	ENSG00000130119.14	ENST00000336470	hsa-miR-106a-3p	54561030	54561036	7mer-m8	54561018	54561037	143	-10.66
CAediting_1508985	chrX_54560913_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1227-3p	54560907	54560913	7mer-m8	54560895	54560914	140	-11.41
CAediting_1509014	chrX_54561037_+	ENSG00000130119.14	ENST00000336470	hsa-miR-130a-3p	54561032	54561038	7mer-m8	54561018	54561039	152	-14.74
CAediting_1508961	chrX_54560802_+	ENSG00000130119.14	ENST00000336470	hsa-miR-150-5p	54560796	54560802	7mer-m8	54560782	54560803	140	-15.8
CAediting_1508989	chrX_54560936_+	ENSG00000130119.14	ENST00000336470	hsa-miR-150-5p	54560930	54560936	7mer-m8	54560916	54560937	140	-13.49
CAediting_1508972	chrX_54560864_+	ENSG00000130119.14	ENST00000336470	hsa-miR-193b-5p	54560862	54560868	7mer-m8	54560848	54560869	142	-20.42
CAediting_1508973	chrX_54560865_+	ENSG00000130119.14	ENST00000336470	hsa-miR-193b-5p	54560862	54560868	7mer-m8	54560848	54560869	142	-20.42
CAediting_1508991	chrX_54560946_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1976	54560943	54560950	8mer-1a	54560930	54560950	149	-21.37
CAediting_1508992	chrX_54560949_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1976	54560943	54560950	8mer-1a	54560930	54560950	149	-21.37
CAediting_1508999	chrX_54560978_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1976	54560975	54560982	8mer-1a	54560963	54560982	150	-20.85
CAediting_1509000	chrX_54560981_+	ENSG00000130119.14	ENST00000336470	hsa-miR-1976	54560975	54560982	8mer-1a	54560963	54560982	150	-20.85
CAediting_1508967	chrX_54560842_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3663-5p	54560839	54560845	7mer-m8	54560827	54560846	148	-21.98
CAediting_1508968	chrX_54560845_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3663-5p	54560839	54560845	7mer-m8	54560827	54560846	148	-21.98
CAediting_1509014	chrX_54561037_+	ENSG00000130119.14	ENST00000336470	hsa-miR-3666	54561032	54561038	7mer-m8	54561020	54561039	145	-18.3
CAediting_1509009	chrX_54561017_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4284	54561013	54561019	7mer-m8	54561003	54561020	151	-19.71
CAediting_1509014	chrX_54561037_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4295	54561032	54561038	7mer-m8	54561022	54561039	155	-12.91
CAediting_1508969	chrX_54560854_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4435	54560847	54560854	8mer-1a	54560834	54560854	146	-18.85
CAediting_1508969	chrX_54560854_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4435	54560847	54560854	8mer-1a	54560834	54560854	146	-18.85
CAediting_1509009	chrX_54561017_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4437	54561014	54561021	8mer-1a	54561001	54561021	145	-18.97
CAediting_1508996	chrX_54560970_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4474-5p	54560966	54560973	8mer-1a	54560951	54560973	153	-15.27
CAediting_1508997	chrX_54560973_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4474-5p	54560966	54560973	8mer-1a	54560951	54560973	153	-15.27
CAediting_1509009	chrX_54561017_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4674	54561015	54561021	7mer-m8	54561002	54561022	141	-23.43
CAediting_1509010	chrX_54561022_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4674	54561015	54561021	7mer-m8	54561002	54561022	141	-23.43
CAediting_1508965	chrX_54560834_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4680-5p	54560832	54560837	6mer	54560818	54560838	146	-20.71
CAediting_1508996	chrX_54560970_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4713-5p	54560963	54560969	7mer-m8	54560949	54560970	153	-19.49
CAediting_1508970	chrX_54560857_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4716-5p	54560853	54560859	7mer-m8	54560839	54560860	140	-11.3
CAediting_1508969	chrX_54560854_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4781-3p	54560851	54560857	7mer-m8	54560840	54560858	144	-13.86
CAediting_1508970	chrX_54560857_+	ENSG00000130119.14	ENST00000336470	hsa-miR-4781-3p	54560851	54560857	7mer-m8	54560840	54560858	144	-13.86
CAediting_1508987	chrX_54560925_+	ENSG00000130119.14	ENST00000336470	hsa-miR-5089-5p	54560918	54560924	7mer-m8	54560906	54560925	145	-13.06
CAediting_1508988	chrX_54560929_+	ENSG00000130119.14	ENST00000336470	hsa-miR-562	54560925	54560931	7mer-m8	54560913	54560932	150	-12.47
CAediting_1508988	chrX_54560929_+	ENSG00000130119.14	ENST00000336470	hsa-miR-5697	54560926	54560932	7mer-m8	54560911	54560933	153	-17.23
CAediting_1508967	chrX_54560842_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6131	54560840	54560846	7mer-m8	54560829	54560847	140	-18.33
CAediting_1508968	chrX_54560845_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6131	54560840	54560846	7mer-m8	54560829	54560847	140	-18.33
CAediting_1508958	chrX_54560785_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6504-3p	54560780	54560786	7mer-m8	54560766	54560787	150	-14.82
CAediting_1508959	chrX_54560786_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6504-3p	54560780	54560786	7mer-m8	54560766	54560787	150	-14.82
CAediting_1508960	chrX_54560791_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6506-5p	54560785	54560791	7mer-m8	54560770	54560792	144	-15.92
CAediting_1508987	chrX_54560925_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6506-5p	54560919	54560925	7mer-m8	54560897	54560926	148	-29.49
CAediting_1508991	chrX_54560946_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6747-3p	54560941	54560948	8mer-1a	54560927	54560948	150	-24.11
CAediting_1508961	chrX_54560802_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6778-3p	54560798	54560804	7mer-m8	54560785	54560805	143	-13.97
CAediting_1508989	chrX_54560936_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6778-3p	54560932	54560938	7mer-m8	54560919	54560939	140	-14.56
CAediting_1509005	chrX_54561000_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6778-3p	54560996	54561003	8mer-1a	54560983	54561003	142	-17.53
CAediting_1509005	chrX_54561000_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6791-3p	54560997	54561003	7mer-1a	54560984	54561003	149	-25.21
CAediting_1508957	chrX_54560777_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6807-5p	54560770	54560776	7mer-m8	54560757	54560777	145	-17.38
CAediting_1508974	chrX_54560876_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6832-5p	54560870	54560876	7mer-m8	54560855	54560877	142	-16.66
CAediting_1509005	chrX_54561000_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6836-3p	54560997	54561003	7mer-m8	54560984	54561004	147	-20.34
CAediting_1509006	chrX_54561004_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6836-3p	54560997	54561003	7mer-m8	54560984	54561004	147	-20.34
CAediting_1508966	chrX_54560840_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6843-3p	54560838	54560844	7mer-m8	54560826	54560845	152	-19.47
CAediting_1508967	chrX_54560842_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6843-3p	54560838	54560844	7mer-m8	54560826	54560845	152	-19.47
CAediting_1508968	chrX_54560845_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6843-3p	54560838	54560844	7mer-m8	54560826	54560845	152	-19.47
CAediting_1508966	chrX_54560840_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6848-3p	54560838	54560844	7mer-m8	54560828	54560845	142	-14.3
CAediting_1508967	chrX_54560842_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6848-3p	54560838	54560844	7mer-m8	54560828	54560845	142	-14.3
CAediting_1508968	chrX_54560845_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6848-3p	54560838	54560844	7mer-m8	54560828	54560845	142	-14.3
CAediting_1508957	chrX_54560777_+	ENSG00000130119.14	ENST00000336470	hsa-miR-6863	54560775	54560781	7mer-m8	54560758	54560782	151	-19.43
CAediting_1509016	chrX_54561051_+	ENSG00000130119.14	ENST00000336470	hsa-miR-744-3p	54561047	54561054	8mer-1a	54561033	54561054	140	-10.26
CAediting_1508994	chrX_54560952_+	ENSG00000130119.14	ENST00000336470	hsa-miR-8053	54560950	54560956	7mer-m8	54560934	54560957	146	-18.21
CAediting_1509002	chrX_54560984_+	ENSG00000130119.14	ENST00000336470	hsa-miR-8053	54560982	54560988	7mer-m8	54560966	54560989	146	-16.31

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for GNL3L

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for GNL3L

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_1508957	chrX_54560777_+	0.00723844174404509	0.244003770473532	.	.	.	.
STAD	CAediting_1508957	chrX_54560777_+	0.000518280048106987	0.251429704323587	.	.	.	.
BLCA	CAediting_1508959	chrX_54560786_+	0.0113080090105767	0.271954619418568	.	.	.	.
BRCA	CAediting_1508959	chrX_54560786_+	5.69429960945629e-11	0.329903841759006	.	.	0.0397211054270088	0.106258200395832
LUAD	CAediting_1508959	chrX_54560786_+	0.00502808609443475	0.334052796870008	.	.	.	.
LUSC	CAediting_1508959	chrX_54560786_+	0.0170856216830971	0.189511437294513	0.00202444499196913	0.243778616407831	.	.
HNSC	CAediting_1508959	chrX_54560786_+	3.24626050835146e-06	0.35028111467489	.	.	.	.
STAD	CAediting_1508959	chrX_54560786_+	4.29760479177701e-11	0.37766241115802	.	.	.	.
ESCA	CAediting_1508959	chrX_54560786_+	0.000374055493047494	0.279592734558088	0.033496657691216	0.169263383617993	.	.
OV	CAediting_1508959	chrX_54560786_+	1.51319928519445e-05	0.258125929421652	.	.	.	.
SKCM	CAediting_1508959	chrX_54560786_+	1.49662710423951e-09	0.388349782053064	.	.	.	.
STAD	CAediting_1508960	chrX_54560791_+	.	.	.	.	0.0246729438492552	0.294806162952755
STAD	CAediting_1508971	chrX_54560863_+	0.0049643451893813	0.207969192673811	.	.	.	.
OV	CAediting_1508971	chrX_54560863_+	0.000388445269302256	0.302120612634008	.	.	.	.
STAD	CAediting_1508972	chrX_54560864_+	0.0383688596356336	0.143023310159929	.	.	.	.
OV	CAediting_1508972	chrX_54560864_+	0.0337551829414921	0.160590303489247	.	.	.	.
STAD	CAediting_1508973	chrX_54560865_+	0.012155179662212	0.160645260137583	.	.	.	.
STAD	CAediting_1508975	chrX_54560879_+	0.0386714428596833	0.265459064444089	.	.	.	.
BLCA	CAediting_1508986	chrX_54560919_+	0.0136534130812701	0.245917401886674	.	.	.	.
BRCA	CAediting_1508986	chrX_54560919_+	1.23242354791099e-09	0.261666743011417	.	.	0.0207429289398783	0.101106960942054
LUAD	CAediting_1508986	chrX_54560919_+	0.00859858105656897	0.275445416764269	.	.	.	.
COAD	CAediting_1508986	chrX_54560919_+	0.0104680119408668	0.209859235794418	.	.	.	.
LUSC	CAediting_1508986	chrX_54560919_+	0.0253946544231704	0.16302440745074	.	.	.	.
HNSC	CAediting_1508986	chrX_54560919_+	3.11881733844185e-07	0.374204644304426	0.0177936687950729	0.178471818973969	.	.
STAD	CAediting_1508986	chrX_54560919_+	0.0111921648113433	0.139273122505551	.	.	.	.
KIRC	CAediting_1508986	chrX_54560919_+	0.0100340395999224	0.21771917159147	.	.	.	.
UCEC	CAediting_1508986	chrX_54560919_+	4.5536514450668e-08	0.374802197022414	.	.	.	.
ESCA	CAediting_1508986	chrX_54560919_+	0.0314002855004697	0.169688694945483	.	.	.	.
OV	CAediting_1508986	chrX_54560919_+	0.00462401877773491	0.150201983857592	.	.	.	.
SKCM	CAediting_1508986	chrX_54560919_+	7.11575732911797e-09	0.379446170895082	0.0342068019015115	0.143505542826973	.	.
BRCA	CAediting_1508987	chrX_54560925_+	0.00848431166251123	0.185664712077208	.	.	.	.
STAD	CAediting_1508987	chrX_54560925_+	0.000287604624104182	0.232078977339004	.	.	.	.
BRCA	CAediting_1508988	chrX_54560929_+	0.0233142188376871	0.101839281797138	.	.	.	.
PRAD	CAediting_1508988	chrX_54560929_+	0.0461169140112826	0.232604743801194	.	.	.	.
HNSC	CAediting_1508988	chrX_54560929_+	0.0111611257806341	0.185202279289954	.	.	.	.
STAD	CAediting_1508988	chrX_54560929_+	6.60707627049153e-05	0.217826222492245	.	.	.	.
KIRP	CAediting_1508988	chrX_54560929_+	0.0480793176154575	0.278194786329062	.	.	.	.
ESCA	CAediting_1508988	chrX_54560929_+	0.0271254501934715	0.174716706343702	.	.	.	.
SKCM	CAediting_1508988	chrX_54560929_+	2.50519944399708e-06	0.323486399412177	.	.	.	.
BRCA	CAediting_1508991	chrX_54560946_+	.	.	0.0111220668881969	0.284254074187334	.	.
STAD	CAediting_1508991	chrX_54560946_+	0.039130542406463	0.172718212816515	.	.	.	.
ESCA	CAediting_1508999	chrX_54560978_+	.	.	7.95264681334585e-06	0.580618080937196	.	.
BLCA	CAediting_1509003	chrX_54560992_+	5.68744319881785e-10	0.383531191612077	0.00135666348531811	0.20398364034061	.	.
BRCA	CAediting_1509003	chrX_54560992_+	2.79314760627719e-16	0.278932469584757	.	.	.	.
CESC	CAediting_1509003	chrX_54560992_+	8.9374881308069e-05	0.294232144963518	.	.	.	.
LUAD	CAediting_1509003	chrX_54560992_+	1.10509861038769e-06	0.302983198951058	.	.	.	.
COAD	CAediting_1509003	chrX_54560992_+	6.37518413042454e-05	0.244437806264975	0.0267001190874673	0.136906555207662	.	.
LUSC	CAediting_1509003	chrX_54560992_+	9.31094701520609e-05	0.212498781751054	0.0117515999395195	0.137926820206876	.	.
PRAD	CAediting_1509003	chrX_54560992_+	0.0406399304885147	0.159081138848981	.	.	.	.
HNSC	CAediting_1509003	chrX_54560992_+	3.32203777841525e-11	0.365043748266188	0.0090707946603665	0.147983482267813	.	.
STAD	CAediting_1509003	chrX_54560992_+	1.10189131615215e-06	0.258057659841891	.	.	.	.
KIRC	CAediting_1509003	chrX_54560992_+	0.00556845340670116	0.163532892770646	.	.	.	.
UCEC	CAediting_1509003	chrX_54560992_+	3.4180028902701e-06	0.281873657119317	.	.	.	.
KIRP	CAediting_1509003	chrX_54560992_+	2.75099663950897e-05	0.410050964213253	.	.	.	.
ESCA	CAediting_1509003	chrX_54560992_+	0.00598152788061058	0.215097246477891	.	.	.	.
OV	CAediting_1509003	chrX_54560992_+	1.26866175632658e-06	0.246150380620602	.	.	.	.
PAAD	CAediting_1509003	chrX_54560992_+	0.00249521898257888	0.368903678029464	.	.	.	.
SKCM	CAediting_1509003	chrX_54560992_+	3.62877327589069e-13	0.382237109898835	.	.	.	.
SARC	CAediting_1509003	chrX_54560992_+	0.000349583347543734	0.343998912886815	0.0436710395341667	0.198234398031725	.	.
TGCT	CAediting_1509003	chrX_54560992_+	0.000926878473237658	0.324608468733704	.	.	.	.
BLCA	CAediting_1509004	chrX_54560993_+	0.000212199189326529	0.328039956752009	0.0135215759464633	0.222165913467455	.	.
BRCA	CAediting_1509004	chrX_54560993_+	8.31925743899832e-07	0.194524052702876	.	.	.	.
LUAD	CAediting_1509004	chrX_54560993_+	0.000662001875880189	0.273153557525668	.	.	.	.
PRAD	CAediting_1509004	chrX_54560993_+	.	.	0.00125546516610648	0.344242646691078	.	.
HNSC	CAediting_1509004	chrX_54560993_+	.	.	.	.	0.0114700822443023	0.190171120212317
STAD	CAediting_1509004	chrX_54560993_+	3.625259625188e-06	0.249242559714809	.	.	.	.
UCEC	CAediting_1509004	chrX_54560993_+	0.0111478774772876	0.2027208845402	.	.	.	.
ESCA	CAediting_1509004	chrX_54560993_+	0.00171727473852248	0.244470228420181	0.000408990279846748	0.274448017657179	.	.
OV	CAediting_1509004	chrX_54560993_+	1.22245934789225e-07	0.27078101213436	.	.	.	.
TGCT	CAediting_1509004	chrX_54560993_+	0.0162757354217978	0.338261905248914	.	.	.	.
LUAD	CAediting_1509006	chrX_54561004_+	0.00778795806420004	0.235141225054902	.	.	.	.
COAD	CAediting_1509006	chrX_54561004_+	0.000100273249212657	0.370454020358625	.	.	.	.
LUSC	CAediting_1509006	chrX_54561004_+	0.0439903661289598	0.170509499356123	.	.	.	.
HNSC	CAediting_1509006	chrX_54561004_+	0.0357024768905631	0.173395622421504	.	.	.	.
STAD	CAediting_1509006	chrX_54561004_+	0.00244590675017127	0.167527747008684	.	.	.	.
THCA	CAediting_1509006	chrX_54561004_+	.	.	.	.	0.0289437752091823	0.229084366746112
ESCA	CAediting_1509006	chrX_54561004_+	0.0144866515489342	0.192385661601442	.	.	.	.
OV	CAediting_1509006	chrX_54561004_+	0.00515353940749398	0.147752358034124	.	.	.	.
OV	CAediting_1509012	chrX_54561029_+	0.0164734186630417	0.2292854165089	.	.	.	.

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Relation with cancer stages for GNL3L

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_1508986	chrX_54560919_+	0.0197888850269129	0.233918199365136
COAD	pathologic_stage	CAediting_1509003	chrX_54560992_+	0.00132803427235415	-0.201527268292781
ESCA	pathologic_stage	CAediting_1508959	chrX_54560786_+	0.0202030823501542	0.196842611989105
ESCA	pathologic_stage	CAediting_1508986	chrX_54560919_+	0.0290879344493905	0.183200349562756
OV	clinical_stage	CAediting_1508958	chrX_54560785_+	0.0237892588502703	-0.228251932864338
READ	pathologic_stage	CAediting_1509003	chrX_54560992_+	0.00343042985724614	-0.313980179244053
THCA	pathologic_stage	CAediting_1509004	chrX_54560993_+	0.00885597530332236	0.247374524854094

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Relation with survival for GNL3L

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
UCEC	CAediting_1508986	chrX_54560919_+	0.0444593336828336	0.0296951	10.2173
ESCA	CAediting_1509006	chrX_54561004_+	0.00783379060209322	0.00319619	478.468

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RelatedDrugs for GNL3L

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for GNL3L

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene