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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: EXOC6 (CAeditome ID:54536)

Gene summary for EXOC6

check button Gene summary
Gene informationGene symbol

EXOC6

Gene ID

54536

Gene nameexocyst complex component 6
SynonymsEXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p
Cytomap

10q23.33

Type of geneprotein-coding
Descriptionexocyst complex component 6SEC15-like 1SEC15-like protein 3exocyst complex component Sec15Arsec15-like protein
Modification date20210518
UniProtAcc

Q8TAG9

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for EXOC6

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000138190.15

check button RNA A-to-I editing events in Cancer.
CAediting_771352(92844036, +), CAediting_771353(92851516, +), CAediting_771354(92855101, +), CAediting_771355(92865636, +), CAediting_771356(92869442, +), CAediting_771357(92871345, +), CAediting_771358(92873933, +), CAediting_771359(92873985, +), CAediting_771360(92895793, +), CAediting_771361(92898289, +), CAediting_771362(92898342, +), CAediting_771363(92898345, +), CAediting_771364(92898355, +), CAediting_771365(92898374, +), CAediting_771366(92901819, +), CAediting_771367(92917599, +), CAediting_771368(92930921, +), CAediting_771369(92930965, +), CAediting_771370(92931069, +), CAediting_771371(92931672, +), CAediting_771372(92931698, +), CAediting_771373(92942118, +), CAediting_771374(92953087, +), CAediting_771375(92954633, +), CAediting_771376(92978303, +), CAediting_771377(92979675, +), CAediting_771378(92979798, +), CAediting_771379(92979817, +), CAediting_771380(93010448, +), CAediting_771381(93010534, +), CAediting_771382(93010538, +), CAediting_771383(93010570, +), CAediting_771384(93010579, +), CAediting_771385(93010619, +), CAediting_771386(93010627, +), CAediting_771387(93010649, +), CAediting_771388(93010664, +), CAediting_771389(93012849, +), CAediting_771390(93012927, +), CAediting_771391(93012963, +), CAediting_771392(93012989, +), CAediting_771393(93015531, +), CAediting_771394(93016263, +), CAediting_771395(93016273, +), CAediting_771396(93016423, +), CAediting_771397(93017077, +), CAediting_771398(93017335, +), CAediting_771399(93017336, +), CAediting_771400(93017413, +), CAediting_771401(93017427, +), CAediting_771402(93017432, +), CAediting_771403(93017442, +), CAediting_771404(93017757, +), CAediting_771405(93017824, +), CAediting_771406(93017828, +), CAediting_771407(93017883, +), CAediting_771408(93017890, +), CAediting_771409(93017899, +), CAediting_771410(93017916, +), CAediting_771411(93017942, +), CAediting_771412(93021220, +), CAediting_771413(93032216, +), CAediting_771414(93032230, +), CAediting_771415(93036019, +), CAediting_771416(93036124, +), CAediting_771417(93036133, +), CAediting_771418(93036138, +), CAediting_771419(93036159, +), CAediting_771420(93037281, +), CAediting_771421(93037301, +), CAediting_771422(93037509, +), CAediting_771423(93037519, +), CAediting_771424(93037533, +), CAediting_771425(93037919, +), CAediting_771426(93037920, +), CAediting_771427(93037935, +), CAediting_771428(93037946, +), CAediting_771429(93041908, +), CAediting_771430(93041963, +), CAediting_771431(93041985, +), CAediting_771432(93047416, +), CAediting_771433(93048635, +), CAediting_771434(93048636, +), CAediting_771435(93049268, +), CAediting_771436(93049640, +), CAediting_771437(93049654, +), CAediting_771438(93049659, +), CAediting_771439(93049666, +), CAediting_771440(93049680, +), CAediting_771441(93049692, +), CAediting_771442(93049697, +), CAediting_771443(93049768, +), CAediting_771444(93050287, +), CAediting_771445(93050289, +), CAediting_771446(93050295, +), CAediting_771447(93050404, +), CAediting_771448(93050430, +), CAediting_771449(93050606, +), CAediting_771450(93050639, +), CAediting_771451(93050640, +), CAediting_771452(93050653, +), CAediting_771453(93050792, +), CAediting_771454(93050793, +),

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RNA editing positional annotations for EXOC6 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_771352chr10_92844036_+intronic
CAediting_771353chr10_92851516_+intronic
CAediting_771354chr10_92855101_+intronic
CAediting_771355chr10_92865636_+intronic
CAediting_771356chr10_92869442_+intronic
CAediting_771357chr10_92871345_+intronic
CAediting_771358chr10_92873933_+intronic
CAediting_771359chr10_92873985_+intronic
CAediting_771360chr10_92895793_+intronic
CAediting_771361chr10_92898289_+intronic
CAediting_771362chr10_92898342_+intronic
CAediting_771363chr10_92898345_+intronic
CAediting_771364chr10_92898355_+intronic
CAediting_771365chr10_92898374_+intronic
CAediting_771366chr10_92901819_+UTR3
CAediting_771367chr10_92917599_+intronic
CAediting_771368chr10_92930921_+intronic
CAediting_771369chr10_92930965_+intronic
CAediting_771370chr10_92931069_+intronic
CAediting_771371chr10_92931672_+intronic
CAediting_771372chr10_92931698_+intronic
CAediting_771373chr10_92942118_+intronic
CAediting_771374chr10_92953087_+intronic
CAediting_771375chr10_92954633_+exonic
CAediting_771376chr10_92978303_+intronic
CAediting_771377chr10_92979675_+intronic
CAediting_771378chr10_92979798_+intronic
CAediting_771379chr10_92979817_+intronic
CAediting_771380chr10_93010448_+intronic
CAediting_771381chr10_93010534_+intronic
CAediting_771382chr10_93010538_+intronic
CAediting_771383chr10_93010570_+intronic
CAediting_771384chr10_93010579_+intronic
CAediting_771385chr10_93010619_+intronic
CAediting_771386chr10_93010627_+intronic
CAediting_771387chr10_93010649_+intronic
CAediting_771388chr10_93010664_+intronic
CAediting_771389chr10_93012849_+intronic
CAediting_771390chr10_93012927_+intronic
CAediting_771391chr10_93012963_+intronic
CAediting_771392chr10_93012989_+intronic
CAediting_771393chr10_93015531_+intronic
CAediting_771394chr10_93016263_+intronic
CAediting_771395chr10_93016273_+intronic
CAediting_771396chr10_93016423_+intronic
CAediting_771397chr10_93017077_+intronic
CAediting_771398chr10_93017335_+intronic
CAediting_771399chr10_93017336_+intronic
CAediting_771400chr10_93017413_+intronic
CAediting_771401chr10_93017427_+intronic
CAediting_771402chr10_93017432_+intronic
CAediting_771403chr10_93017442_+intronic
CAediting_771404chr10_93017757_+intronic
CAediting_771405chr10_93017824_+intronic
CAediting_771406chr10_93017828_+intronic
CAediting_771407chr10_93017883_+intronic
CAediting_771408chr10_93017890_+intronic
CAediting_771409chr10_93017899_+intronic
CAediting_771410chr10_93017916_+intronic
CAediting_771411chr10_93017942_+intronic
CAediting_771412chr10_93021220_+intronic
CAediting_771413chr10_93032216_+intronic
CAediting_771414chr10_93032230_+intronic
CAediting_771415chr10_93036019_+intronic
CAediting_771416chr10_93036124_+intronic
CAediting_771417chr10_93036133_+intronic
CAediting_771418chr10_93036138_+intronic
CAediting_771419chr10_93036159_+intronic
CAediting_771420chr10_93037281_+intronic
CAediting_771421chr10_93037301_+intronic
CAediting_771422chr10_93037509_+intronic
CAediting_771423chr10_93037519_+intronic
CAediting_771424chr10_93037533_+intronic
CAediting_771425chr10_93037919_+intronic
CAediting_771426chr10_93037920_+intronic
CAediting_771427chr10_93037935_+intronic
CAediting_771428chr10_93037946_+intronic
CAediting_771429chr10_93041908_+intronic
CAediting_771430chr10_93041963_+intronic
CAediting_771431chr10_93041985_+intronic
CAediting_771432chr10_93047416_+intronic
CAediting_771433chr10_93048635_+intronic
CAediting_771434chr10_93048636_+intronic
CAediting_771435chr10_93049268_+intronic
CAediting_771436chr10_93049640_+intronic
CAediting_771437chr10_93049654_+intronic
CAediting_771438chr10_93049659_+intronic
CAediting_771439chr10_93049666_+intronic
CAediting_771440chr10_93049680_+intronic
CAediting_771441chr10_93049692_+intronic
CAediting_771442chr10_93049697_+intronic
CAediting_771443chr10_93049768_+intronic
CAediting_771444chr10_93050287_+intronic
CAediting_771445chr10_93050289_+intronic
CAediting_771446chr10_93050295_+intronic
CAediting_771447chr10_93050404_+intronic
CAediting_771448chr10_93050430_+intronic
CAediting_771449chr10_93050606_+intronic
CAediting_771450chr10_93050639_+intronic
CAediting_771451chr10_93050640_+intronic
CAediting_771452chr10_93050653_+intronic
CAediting_771453chr10_93050792_+intronic
CAediting_771454chr10_93050793_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_771352chr10_92844036_+SINEAluAluSc
CAediting_771353chr10_92851516_+SINEAluAluSz
CAediting_771354chr10_92855101_+SINEAluAluJo
CAediting_771355chr10_92865636_+SINEAluAluSz
CAediting_771356chr10_92869442_+SINEAluAluJr4
CAediting_771357chr10_92871345_+SINEAluAluJb
CAediting_771358chr10_92873933_+SINEAluAluSz
CAediting_771359chr10_92873985_+SINEAluAluSz
CAediting_771360chr10_92895793_+SINEAluAluJo
CAediting_771361chr10_92898289_+SINEAluAluJr
CAediting_771362chr10_92898342_+SINEAluAluJr
CAediting_771363chr10_92898345_+SINEAluAluJr
CAediting_771364chr10_92898355_+SINEAluAluJr
CAediting_771365chr10_92898374_+SINEAluAluJr
CAediting_771366chr10_92901819_+SINEAluAluJb
CAediting_771367chr10_92917599_+SINEAluAluJr
CAediting_771368chr10_92930921_+SINEAluAluSc
CAediting_771369chr10_92930965_+SINEAluAluSc
CAediting_771370chr10_92931069_+SINEAluAluSc
CAediting_771371chr10_92931672_+LINEL1L1ME1
CAediting_771372chr10_92931698_+LINEL1L1ME1
CAediting_771373chr10_92942118_+SINEAluAluJr
CAediting_771374chr10_92953087_+SINEAluAluJr
CAediting_771376chr10_92978303_+SINEAluAluJb
CAediting_771377chr10_92979675_+SINEAluAluJb
CAediting_771378chr10_92979798_+SINEAluAluJb
CAediting_771379chr10_92979817_+SINEAluAluJb
CAediting_771380chr10_93010448_+SINEAluAluSz
CAediting_771381chr10_93010534_+SINEAluAluSz
CAediting_771382chr10_93010538_+SINEAluAluSz
CAediting_771383chr10_93010570_+SINEAluAluSz
CAediting_771384chr10_93010579_+SINEAluAluSz
CAediting_771385chr10_93010619_+SINEAluAluSz
CAediting_771386chr10_93010627_+SINEAluAluSz
CAediting_771387chr10_93010649_+SINEAluAluSz
CAediting_771388chr10_93010664_+SINEAluAluSz
CAediting_771389chr10_93012849_+SINEAluAluJr
CAediting_771390chr10_93012927_+SINEAluAluJr
CAediting_771391chr10_93012963_+SINEAluAluJr
CAediting_771392chr10_93012989_+SINEAluAluJr
CAediting_771393chr10_93015531_+SINEAluAluSc8
CAediting_771394chr10_93016263_+SINEAluAluSz6
CAediting_771395chr10_93016273_+SINEAluAluSz6
CAediting_771396chr10_93016423_+SINEAluAluSz6
CAediting_771397chr10_93017077_+SINEAluAluSx
CAediting_771398chr10_93017335_+SINEAluAluSc8
CAediting_771399chr10_93017336_+SINEAluAluSc8
CAediting_771400chr10_93017413_+SINEAluAluSc8
CAediting_771401chr10_93017427_+SINEAluAluSc8
CAediting_771402chr10_93017432_+SINEAluAluSc8
CAediting_771403chr10_93017442_+SINEAluAluSc8
CAediting_771404chr10_93017757_+SINEAluAluSq2
CAediting_771405chr10_93017824_+SINEAluAluSq2
CAediting_771406chr10_93017828_+SINEAluAluSq2
CAediting_771407chr10_93017883_+SINEAluAluSq2
CAediting_771408chr10_93017890_+SINEAluAluSq2
CAediting_771409chr10_93017899_+SINEAluAluSq2
CAediting_771410chr10_93017916_+SINEAluAluSq2
CAediting_771411chr10_93017942_+SINEAluAluSq2
CAediting_771412chr10_93021220_+SINEAluFLAM_C
CAediting_771413chr10_93032216_+SINEAluAluJo
CAediting_771414chr10_93032230_+SINEAluAluJo
CAediting_771415chr10_93036019_+SINEAluAluSp
CAediting_771416chr10_93036124_+SINEAluAluSp
CAediting_771417chr10_93036133_+SINEAluAluSp
CAediting_771418chr10_93036138_+SINEAluAluSp
CAediting_771419chr10_93036159_+SINEAluAluSp
CAediting_771420chr10_93037281_+SINEAluAluJb
CAediting_771421chr10_93037301_+SINEAluAluJb
CAediting_771422chr10_93037509_+SINEAluAluSq
CAediting_771423chr10_93037519_+SINEAluAluSq
CAediting_771424chr10_93037533_+SINEAluAluSq
CAediting_771425chr10_93037919_+SINEAluAluYc
CAediting_771426chr10_93037920_+SINEAluAluYc
CAediting_771427chr10_93037935_+SINEAluAluYc
CAediting_771428chr10_93037946_+SINEAluAluYc
CAediting_771429chr10_93041908_+SINEAluAluSz
CAediting_771430chr10_93041963_+SINEAluAluSz
CAediting_771431chr10_93041985_+SINEAluAluSz
CAediting_771432chr10_93047416_+SINEAluAluSz6
CAediting_771433chr10_93048635_+SINEAluAluSx3
CAediting_771434chr10_93048636_+SINEAluAluSx3
CAediting_771435chr10_93049268_+SINEAluAluY
CAediting_771436chr10_93049640_+SINEAluAluJr
CAediting_771437chr10_93049654_+SINEAluAluJr
CAediting_771438chr10_93049659_+SINEAluAluJr
CAediting_771439chr10_93049666_+SINEAluAluJr
CAediting_771440chr10_93049680_+SINEAluAluJr
CAediting_771441chr10_93049692_+SINEAluAluJr
CAediting_771442chr10_93049697_+SINEAluAluJr
CAediting_771443chr10_93049768_+SINEAluAluJr
CAediting_771444chr10_93050287_+SINEAluAluSx
CAediting_771445chr10_93050289_+SINEAluAluSx
CAediting_771446chr10_93050295_+SINEAluAluSx
CAediting_771447chr10_93050404_+SINEAluAluSx
CAediting_771448chr10_93050430_+SINEAluAluSx
CAediting_771449chr10_93050606_+SINEAluAluSx3
CAediting_771450chr10_93050639_+SINEAluAluSx3
CAediting_771451chr10_93050640_+SINEAluAluSx3
CAediting_771452chr10_93050653_+SINEAluAluSx3
CAediting_771453chr10_93050792_+SINEAluAluSx
CAediting_771454chr10_93050793_+SINEAluAluSx

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RNA A-to-I editing events in the alternative splicing sites for EXOC6

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000138190.15.EXOC6.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000138190.15.EXOC6.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for EXOC6

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for EXOC6

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


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The effects of the RNA editing to the miRNA binding sites for EXOC6

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_771366chr10_92901819_+ENSG00000138190.15ENST00000371543hsa-miR-2681-5p92901815929018217mer-m89290179892901822148-20.57

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229415chr17_67471547_+ENSG00000138190.15ENST00000371552hsa-miR-548aa93058724930587307mer-m89305870993058731149-10.41
CAediting_117844chr1_162342605_+ENSG00000138190.15ENST00000371552hsa-miR-556-3p93059307930593137mer-m89305929393059314157-15.3
CAediting_1229415chr17_67471547_+ENSG00000138190.15ENST00000443748hsa-miR-548aa93058724930587307mer-m89305870993058731149-10.41
CAediting_117844chr1_162342605_+ENSG00000138190.15ENST00000443748hsa-miR-556-3p93059307930593137mer-m89305929393059314157-15.3
CAediting_1160181chr17_7017644_-ENSG00000138190.15ENST00000371543hsa-miR-195-3p92900916929009238mer-1a9290090292900923143-7.91
CAediting_86358chr1_109598906_+ENSG00000138190.15ENST00000371543hsa-miR-197-5p92900268929002736mer9290025192900274143-27.96
CAediting_117844chr1_162342605_+ENSG00000138190.15ENST00000371543hsa-miR-556-3p92900238929002447mer-m89290022592900245150-16.89
CAediting_1229415chr17_67471547_+ENSG00000138190.15ENST00000260762hsa-miR-548aa93058724930587307mer-m89305870993058731149-10.41
CAediting_117844chr1_162342605_+ENSG00000138190.15ENST00000260762hsa-miR-556-3p93059307930593137mer-m89305929393059314157-15.3

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1160181chr17_7017644_-ENSG00000138190.15ENST00000371543hsa-miR-195-3p92899899928999068mer-1a9289988592899906152-10.48
CAediting_1351755chr19_40282625_-ENSG00000138190.15ENST00000371543hsa-miR-64192900888929008958mer-1a9290086892900895146-15.16
CAediting_1351755chr19_40282625_-ENSG00000138190.15ENST00000371543hsa-miR-64192901553929015586mer9290153692901559144-18.7

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for EXOC6

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for EXOC6

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for EXOC6

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for EXOC6

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for EXOC6

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for EXOC6

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource