Home

Download

Statistics

Examples

Help

Contact

Editing gene: ANKRD16 (CAeditome ID:54522)

Gene summary for ANKRD16

Gene summary

Gene information	Gene symbol	ANKRD16
	Gene ID	54522
	Gene name	ankyrin repeat domain 16
	Synonyms	-
	Cytomap	10p15.1
	Type of gene	protein-coding
	Description	ankyrin repeat domain-containing protein 16
	Modification date	20210518
	UniProtAcc	Q6P6B7
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

Top

RNA A-to-I events for ANKRD16

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000134461.14

RNA A-to-I editing events in Cancer.

CAediting_726262(5861896, -), CAediting_726263(5861931, -), CAediting_726264(5861937, -), CAediting_726265(5861987, -), CAediting_726266(5861991, -), CAediting_726267(5861998, -), CAediting_726268(5861999, -), CAediting_726269(5862010, -), CAediting_726270(5862013, -), CAediting_726271(5862017, -), CAediting_726272(5862026, -), CAediting_726273(5862034, -), CAediting_726274(5862066, -), CAediting_726275(5862069, -), CAediting_726276(5862071, -), CAediting_726277(5862072, -), CAediting_726278(5862073, -), CAediting_726279(5862074, -), CAediting_726280(5862077, -), CAediting_726281(5862079, -), CAediting_726282(5862080, -), CAediting_726283(5862082, -), CAediting_726284(5862083, -), CAediting_726285(5862098, -), CAediting_726286(5862099, -), CAediting_726287(5862100, -), CAediting_726288(5862123, -), CAediting_726289(5862132, -), CAediting_726290(5862153, -), CAediting_726291(5862170, -), CAediting_726292(5862175, -), CAediting_726293(5862176, -), CAediting_726294(5862184, -), CAediting_726295(5870496, -), CAediting_726296(5870524, -), CAediting_726297(5870652, -), CAediting_726298(5870659, -), CAediting_726299(5871219, -), CAediting_726300(5871224, -), CAediting_726301(5871265, -), CAediting_726302(5871278, -), CAediting_726303(5871356, -), CAediting_726304(5872417, -), CAediting_726305(5872422, -), CAediting_726306(5872432, -), CAediting_726307(5872864, -), CAediting_726308(5872981, -), CAediting_726309(5872998, -), CAediting_726310(5873297, -), CAediting_726311(5873347, -), CAediting_726312(5879217, -), CAediting_726313(5880998, -), CAediting_726314(5881071, -), CAediting_726315(5881072, -), CAediting_726316(5881078, -), CAediting_726317(5881080, -), CAediting_726318(5881826, -), CAediting_726319(5881852, -), CAediting_726320(5881858, -), CAediting_726321(5881862, -), CAediting_726322(5881890, -), CAediting_726323(5881892, -), CAediting_726324(5881916, -), CAediting_726325(5881967, -), CAediting_726326(5882022, -), CAediting_726327(5882066, -), CAediting_726328(5882337, -), CAediting_726329(5882359, -), CAediting_726330(5882376, -), CAediting_726331(5882385, -), CAediting_726332(5882393, -), CAediting_726333(5882394, -), CAediting_726334(5882418, -), CAediting_726335(5882420, -), CAediting_726336(5882449, -), CAediting_726337(5882450, -),

Top

RNA editing positional annotations for ANKRD16 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_726262	chr10_5861896_-	ncRNA_exonic
CAediting_726263	chr10_5861931_-	ncRNA_intronic
CAediting_726264	chr10_5861937_-	ncRNA_intronic
CAediting_726265	chr10_5861987_-	ncRNA_intronic
CAediting_726266	chr10_5861991_-	ncRNA_intronic
CAediting_726267	chr10_5861998_-	ncRNA_intronic
CAediting_726268	chr10_5861999_-	ncRNA_intronic
CAediting_726269	chr10_5862010_-	ncRNA_intronic
CAediting_726270	chr10_5862013_-	ncRNA_intronic
CAediting_726271	chr10_5862017_-	ncRNA_intronic
CAediting_726272	chr10_5862026_-	ncRNA_intronic
CAediting_726273	chr10_5862034_-	ncRNA_intronic
CAediting_726274	chr10_5862066_-	ncRNA_intronic
CAediting_726275	chr10_5862069_-	ncRNA_intronic
CAediting_726276	chr10_5862071_-	ncRNA_intronic
CAediting_726277	chr10_5862072_-	ncRNA_intronic
CAediting_726278	chr10_5862073_-	ncRNA_intronic
CAediting_726279	chr10_5862074_-	ncRNA_intronic
CAediting_726280	chr10_5862077_-	ncRNA_intronic
CAediting_726281	chr10_5862079_-	ncRNA_intronic
CAediting_726282	chr10_5862080_-	ncRNA_intronic
CAediting_726283	chr10_5862082_-	ncRNA_intronic
CAediting_726284	chr10_5862083_-	ncRNA_intronic
CAediting_726285	chr10_5862098_-	ncRNA_intronic
CAediting_726286	chr10_5862099_-	ncRNA_intronic
CAediting_726287	chr10_5862100_-	ncRNA_intronic
CAediting_726288	chr10_5862123_-	ncRNA_intronic
CAediting_726289	chr10_5862132_-	ncRNA_intronic
CAediting_726290	chr10_5862153_-	ncRNA_intronic
CAediting_726291	chr10_5862170_-	ncRNA_intronic
CAediting_726292	chr10_5862175_-	ncRNA_intronic
CAediting_726293	chr10_5862176_-	ncRNA_intronic
CAediting_726294	chr10_5862184_-	ncRNA_intronic
CAediting_726295	chr10_5870496_-	intronic
CAediting_726296	chr10_5870524_-	intronic
CAediting_726297	chr10_5870652_-	intronic
CAediting_726298	chr10_5870659_-	intronic
CAediting_726299	chr10_5871219_-	intronic
CAediting_726300	chr10_5871224_-	intronic
CAediting_726301	chr10_5871265_-	intronic
CAediting_726302	chr10_5871278_-	intronic
CAediting_726303	chr10_5871356_-	intronic
CAediting_726304	chr10_5872417_-	intronic
CAediting_726305	chr10_5872422_-	intronic
CAediting_726306	chr10_5872432_-	intronic
CAediting_726307	chr10_5872864_-	intronic
CAediting_726308	chr10_5872981_-	intronic
CAediting_726309	chr10_5872998_-	intronic
CAediting_726310	chr10_5873297_-	intronic
CAediting_726311	chr10_5873347_-	intronic
CAediting_726312	chr10_5879217_-	intronic
CAediting_726313	chr10_5880998_-	intronic
CAediting_726314	chr10_5881071_-	intronic
CAediting_726315	chr10_5881072_-	intronic
CAediting_726316	chr10_5881078_-	intronic
CAediting_726317	chr10_5881080_-	intronic
CAediting_726318	chr10_5881826_-	intronic
CAediting_726319	chr10_5881852_-	intronic
CAediting_726320	chr10_5881858_-	intronic
CAediting_726321	chr10_5881862_-	intronic
CAediting_726322	chr10_5881890_-	intronic
CAediting_726323	chr10_5881892_-	intronic
CAediting_726324	chr10_5881916_-	intronic
CAediting_726325	chr10_5881967_-	intronic
CAediting_726326	chr10_5882022_-	intronic
CAediting_726327	chr10_5882066_-	intronic
CAediting_726328	chr10_5882337_-	intronic
CAediting_726329	chr10_5882359_-	intronic
CAediting_726330	chr10_5882376_-	intronic
CAediting_726331	chr10_5882385_-	intronic
CAediting_726332	chr10_5882393_-	intronic
CAediting_726333	chr10_5882394_-	intronic
CAediting_726334	chr10_5882418_-	intronic
CAediting_726335	chr10_5882420_-	intronic
CAediting_726336	chr10_5882449_-	intronic
CAediting_726337	chr10_5882450_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_726262	chr10_5861896_-	SINE	Alu	AluY
CAediting_726263	chr10_5861931_-	SINE	Alu	AluY
CAediting_726264	chr10_5861937_-	SINE	Alu	AluY
CAediting_726265	chr10_5861987_-	SINE	Alu	AluY
CAediting_726266	chr10_5861991_-	SINE	Alu	AluY
CAediting_726267	chr10_5861998_-	SINE	Alu	AluY
CAediting_726268	chr10_5861999_-	SINE	Alu	AluY
CAediting_726269	chr10_5862010_-	SINE	Alu	AluY
CAediting_726270	chr10_5862013_-	SINE	Alu	AluY
CAediting_726271	chr10_5862017_-	SINE	Alu	AluY
CAediting_726272	chr10_5862026_-	SINE	Alu	AluY
CAediting_726273	chr10_5862034_-	SINE	Alu	AluY
CAediting_726274	chr10_5862066_-	SINE	Alu	AluY
CAediting_726275	chr10_5862069_-	SINE	Alu	AluY
CAediting_726276	chr10_5862071_-	SINE	Alu	AluY
CAediting_726277	chr10_5862072_-	SINE	Alu	AluY
CAediting_726278	chr10_5862073_-	SINE	Alu	AluY
CAediting_726279	chr10_5862074_-	SINE	Alu	AluY
CAediting_726280	chr10_5862077_-	SINE	Alu	AluY
CAediting_726281	chr10_5862079_-	SINE	Alu	AluY
CAediting_726282	chr10_5862080_-	SINE	Alu	AluY
CAediting_726283	chr10_5862082_-	SINE	Alu	AluY
CAediting_726284	chr10_5862083_-	SINE	Alu	AluY
CAediting_726285	chr10_5862098_-	SINE	Alu	AluY
CAediting_726286	chr10_5862099_-	SINE	Alu	AluY
CAediting_726287	chr10_5862100_-	SINE	Alu	AluY
CAediting_726288	chr10_5862123_-	SINE	Alu	AluY
CAediting_726289	chr10_5862132_-	SINE	Alu	AluY
CAediting_726290	chr10_5862153_-	SINE	Alu	AluY
CAediting_726291	chr10_5862170_-	SINE	Alu	AluY
CAediting_726292	chr10_5862175_-	SINE	Alu	AluY
CAediting_726293	chr10_5862176_-	SINE	Alu	AluY
CAediting_726294	chr10_5862184_-	SINE	Alu	AluY
CAediting_726295	chr10_5870496_-	SINE	Alu	AluJo
CAediting_726296	chr10_5870524_-	SINE	Alu	AluJo
CAediting_726297	chr10_5870652_-	SINE	Alu	AluJo
CAediting_726298	chr10_5870659_-	SINE	Alu	AluJo
CAediting_726299	chr10_5871219_-	SINE	Alu	AluSp
CAediting_726300	chr10_5871224_-	SINE	Alu	AluSp
CAediting_726301	chr10_5871265_-	SINE	Alu	AluSp
CAediting_726302	chr10_5871278_-	SINE	Alu	AluSp
CAediting_726303	chr10_5871356_-	SINE	Alu	AluSp
CAediting_726304	chr10_5872417_-	SINE	Alu	AluSx1
CAediting_726305	chr10_5872422_-	SINE	Alu	AluSx1
CAediting_726306	chr10_5872432_-	SINE	Alu	AluSx1
CAediting_726307	chr10_5872864_-	SINE	Alu	AluSz
CAediting_726308	chr10_5872981_-	SINE	Alu	AluSz
CAediting_726309	chr10_5872998_-	SINE	Alu	AluSz
CAediting_726310	chr10_5873297_-	SINE	Alu	AluSc8
CAediting_726311	chr10_5873347_-	SINE	Alu	AluSz
CAediting_726312	chr10_5879217_-	SINE	Alu	AluSx1
CAediting_726313	chr10_5880998_-	SINE	Alu	FLAM_C
CAediting_726314	chr10_5881071_-	SINE	Alu	FLAM_C
CAediting_726315	chr10_5881072_-	SINE	Alu	FLAM_C
CAediting_726316	chr10_5881078_-	SINE	Alu	FLAM_C
CAediting_726317	chr10_5881080_-	SINE	Alu	FLAM_C
CAediting_726318	chr10_5881826_-	SINE	Alu	AluYm1
CAediting_726319	chr10_5881852_-	SINE	Alu	AluYm1
CAediting_726320	chr10_5881858_-	SINE	Alu	AluYm1
CAediting_726321	chr10_5881862_-	SINE	Alu	AluYm1
CAediting_726322	chr10_5881890_-	SINE	Alu	AluYm1
CAediting_726323	chr10_5881892_-	SINE	Alu	AluYm1
CAediting_726324	chr10_5881916_-	SINE	Alu	AluYm1
CAediting_726325	chr10_5881967_-	SINE	Alu	AluYm1
CAediting_726326	chr10_5882022_-	SINE	Alu	AluSc
CAediting_726327	chr10_5882066_-	SINE	Alu	AluSc
CAediting_726328	chr10_5882337_-	SINE	Alu	AluSq4
CAediting_726329	chr10_5882359_-	SINE	Alu	AluSq4
CAediting_726330	chr10_5882376_-	SINE	Alu	AluSq4
CAediting_726331	chr10_5882385_-	SINE	Alu	AluSq4
CAediting_726332	chr10_5882393_-	SINE	Alu	AluSq4
CAediting_726333	chr10_5882394_-	SINE	Alu	AluSq4
CAediting_726334	chr10_5882418_-	SINE	Alu	AluSq4
CAediting_726335	chr10_5882420_-	SINE	Alu	AluSq4

Top

RNA A-to-I editing events in the alternative splicing sites for ANKRD16

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000134461.14.ANKRD16.

Correlation between RNA A-to-I editing and PSI for ENSG00000134461.14.ANKRD16.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for ANKRD16

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for ANKRD16

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for ANKRD16

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_117844	chr1_162342605_+	ENSG00000134461.14	ENST00000380092	hsa-miR-556-3p	5878105	5878112	8mer-1a	5878105	5878125	141	-9.98

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ANKRD16

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ANKRD16

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_726292	chr10_5862175_-	0.0294983075733757	0.166033490145518	.	.	.	.
BRCA	CAediting_726292	chr10_5862175_-	0.0141761498179914	0.192988193523083	.	.	.	.
BRCA	CAediting_726293	chr10_5862176_-	0.00110140455469577	0.277887379357646	.	.	.	.
OV	CAediting_726293	chr10_5862176_-	0.00655093432680681	0.241034636170988	.	.	.	.

Top

Relation with cancer stages for ANKRD16

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
OV	clinical_stage	CAediting_726293	chr10_5862176_-	0.0308447275493967	0.193230483020849

Top

Relation with survival for ANKRD16

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
OV	CAediting_726286	chr10_5862099_-	0.0422419075272921	0.0142593	4.84595

Top

RelatedDrugs for ANKRD16

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ANKRD16

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene