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Editing gene: PMS2P1 (CAeditome ID:5379)

Gene summary for PMS2P1

Gene summary

Gene information	Gene symbol	PMS2P1
	Gene ID	5379
	Gene name	PMS1 homolog 2, mismatch repair system component pseudogene 1
	Synonyms	PMS2L1\|PMS2L13\|PMS2L6\|PMS2L7\|PMS2L8\|PMS3\|PMS8\|PMSR1\|PMSR2
	Cytomap	7q22.1
	Type of gene	pseudo
	Description	postmeiotic segregation increased 2 pseudogene 1postmeiotic segregation increased 2-like 1 pseudogenepostmeiotic segregation increased 2-like 5postmeiotic segregation increased 2-like 6postmeiotic segregation increased 2-like 7postmeiotic segregation
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for PMS2P1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000078319.8

RNA A-to-I editing events in Cancer.

CAediting_580657(100322793, -), CAediting_580658(100322799, -), CAediting_580659(100322843, -), CAediting_580660(100322936, -), CAediting_580661(100322947, -), CAediting_580662(100322950, -), CAediting_580663(100323182, -), CAediting_580664(100323195, -), CAediting_580665(100323204, -), CAediting_580666(100323249, -), CAediting_580667(100323252, -), CAediting_580668(100323326, -), CAediting_580669(100323376, -), CAediting_580670(100323400, -), CAediting_580671(100323558, -), CAediting_580672(100323589, -), CAediting_580673(100323601, -), CAediting_580674(100323991, -), CAediting_580675(100324091, -), CAediting_580676(100324099, -), CAediting_580677(100324100, -), CAediting_580678(100324117, -), CAediting_580679(100324121, -), CAediting_580680(100324890, -), CAediting_580681(100324899, -), CAediting_580682(100324920, -), CAediting_580683(100324921, -), CAediting_580684(100324942, -), CAediting_580685(100324943, -), CAediting_580686(100325004, -), CAediting_580687(100325063, -), CAediting_580688(100325068, -), CAediting_580689(100325077, -), CAediting_580690(100325098, -), CAediting_580691(100325103, -), CAediting_580692(100325104, -), CAediting_580693(100325256, -), CAediting_580694(100326050, -), CAediting_580695(100326054, -), CAediting_580696(100326088, -), CAediting_580697(100326108, -), CAediting_580698(100326109, -), CAediting_580699(100326123, -), CAediting_580700(100326127, -), CAediting_580701(100326140, -), CAediting_580702(100326150, -), CAediting_580703(100326171, -), CAediting_580704(100326175, -), CAediting_580705(100326178, -), CAediting_580706(100326179, -), CAediting_580707(100326181, -), CAediting_580708(100326182, -), CAediting_580709(100326184, -), CAediting_580710(100326187, -), CAediting_580711(100326188, -), CAediting_580712(100326189, -), CAediting_580713(100326193, -), CAediting_580714(100326204, -), CAediting_580715(100326206, -), CAediting_580716(100326215, -), CAediting_580717(100326243, -), CAediting_580718(100326246, -), CAediting_580719(100326740, -), CAediting_580720(100326784, -), CAediting_580721(100326786, -), CAediting_580722(100326791, -), CAediting_580723(100326811, -), CAediting_580724(100326815, -), CAediting_580725(100326846, -), CAediting_580726(100326855, -), CAediting_580727(100326856, -), CAediting_580728(100326921, -), CAediting_580729(100326951, -), CAediting_580730(100326965, -), CAediting_580731(100326970, -), CAediting_580732(100327461, -), CAediting_580733(100327478, -), CAediting_580734(100327547, -), CAediting_580735(100327697, -), CAediting_580736(100328123, -), CAediting_580737(100328135, -), CAediting_580738(100328150, -), CAediting_580739(100328158, -), CAediting_580740(100328232, -), CAediting_580741(100328240, -), CAediting_580742(100328254, -), CAediting_580743(100328261, -), CAediting_580744(100328265, -), CAediting_580745(100328267, -), CAediting_580746(100328273, -), CAediting_580747(100328277, -), CAediting_580748(100328289, -), CAediting_580749(100328306, -), CAediting_580750(100328307, -), CAediting_580751(100328312, -), CAediting_580752(100328313, -), CAediting_580753(100328320, -), CAediting_580754(100328332, -), CAediting_580755(100328337, -), CAediting_580756(100328375, -), CAediting_580757(100328458, -), CAediting_580758(100328461, -), CAediting_580759(100328493, -), CAediting_580760(100328496, -), CAediting_580761(100328500, -), CAediting_580762(100328504, -), CAediting_580763(100328530, -), CAediting_580764(100328542, -), CAediting_580765(100328556, -), CAediting_580766(100328566, -), CAediting_580767(100328572, -), CAediting_580768(100328591, -), CAediting_580769(100328596, -), CAediting_580770(100328597, -), CAediting_580771(100328631, -), CAediting_580772(100329646, -), CAediting_580773(100330951, -), CAediting_580774(100331016, -), CAediting_580775(100331125, -), CAediting_580776(100331528, -), CAediting_580777(100331529, -), CAediting_580778(100331845, -), CAediting_580779(100331852, -), CAediting_580780(100332110, -), CAediting_580781(100333045, -), CAediting_580782(100333130, -), CAediting_580783(100333136, -), CAediting_580784(100333141, -), CAediting_580785(100333146, -), CAediting_580786(100333154, -), CAediting_580787(100333167, -), CAediting_580788(100334070, -), CAediting_580789(100334106, -), CAediting_580790(100334108, -), CAediting_580791(100334132, -), CAediting_580792(100334139, -), CAediting_580793(100334241, -), CAediting_580794(100334731, -), CAediting_580795(100334853, -), CAediting_580796(100335330, -), CAediting_580797(100335336, -), CAediting_580798(100335338, -), CAediting_580799(100335350, -), CAediting_580800(100335351, -), CAediting_580801(100335352, -), CAediting_580802(100335374, -), CAediting_580803(100335377, -), CAediting_580804(100335378, -), CAediting_580805(100335402, -), CAediting_580806(100335403, -), CAediting_580807(100335428, -),

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RNA editing positional annotations for PMS2P1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_580657	chr7_100322793_-	ncRNA_intronic
CAediting_580658	chr7_100322799_-	ncRNA_intronic
CAediting_580659	chr7_100322843_-	ncRNA_intronic
CAediting_580660	chr7_100322936_-	ncRNA_intronic
CAediting_580661	chr7_100322947_-	ncRNA_intronic
CAediting_580662	chr7_100322950_-	ncRNA_intronic
CAediting_580663	chr7_100323182_-	ncRNA_intronic
CAediting_580664	chr7_100323195_-	ncRNA_intronic
CAediting_580665	chr7_100323204_-	ncRNA_intronic
CAediting_580666	chr7_100323249_-	ncRNA_intronic
CAediting_580667	chr7_100323252_-	ncRNA_intronic
CAediting_580668	chr7_100323326_-	ncRNA_intronic
CAediting_580669	chr7_100323376_-	ncRNA_intronic
CAediting_580670	chr7_100323400_-	ncRNA_intronic
CAediting_580671	chr7_100323558_-	ncRNA_intronic
CAediting_580672	chr7_100323589_-	ncRNA_intronic
CAediting_580673	chr7_100323601_-	ncRNA_intronic
CAediting_580674	chr7_100323991_-	ncRNA_intronic
CAediting_580675	chr7_100324091_-	ncRNA_intronic
CAediting_580676	chr7_100324099_-	ncRNA_intronic
CAediting_580677	chr7_100324100_-	ncRNA_intronic
CAediting_580678	chr7_100324117_-	ncRNA_intronic
CAediting_580679	chr7_100324121_-	ncRNA_intronic
CAediting_580680	chr7_100324890_-	ncRNA_intronic
CAediting_580681	chr7_100324899_-	ncRNA_intronic
CAediting_580682	chr7_100324920_-	ncRNA_intronic
CAediting_580683	chr7_100324921_-	ncRNA_intronic
CAediting_580684	chr7_100324942_-	ncRNA_intronic
CAediting_580685	chr7_100324943_-	ncRNA_intronic
CAediting_580686	chr7_100325004_-	ncRNA_intronic
CAediting_580687	chr7_100325063_-	ncRNA_intronic
CAediting_580688	chr7_100325068_-	ncRNA_intronic
CAediting_580689	chr7_100325077_-	ncRNA_intronic
CAediting_580690	chr7_100325098_-	ncRNA_intronic
CAediting_580691	chr7_100325103_-	ncRNA_intronic
CAediting_580692	chr7_100325104_-	ncRNA_intronic
CAediting_580693	chr7_100325256_-	ncRNA_intronic
CAediting_580694	chr7_100326050_-	ncRNA_intronic
CAediting_580695	chr7_100326054_-	ncRNA_intronic
CAediting_580696	chr7_100326088_-	ncRNA_intronic
CAediting_580697	chr7_100326108_-	ncRNA_intronic
CAediting_580698	chr7_100326109_-	ncRNA_intronic
CAediting_580699	chr7_100326123_-	ncRNA_intronic
CAediting_580700	chr7_100326127_-	ncRNA_intronic
CAediting_580701	chr7_100326140_-	ncRNA_intronic
CAediting_580702	chr7_100326150_-	ncRNA_intronic
CAediting_580703	chr7_100326171_-	ncRNA_intronic
CAediting_580704	chr7_100326175_-	ncRNA_intronic
CAediting_580705	chr7_100326178_-	ncRNA_intronic
CAediting_580706	chr7_100326179_-	ncRNA_intronic
CAediting_580707	chr7_100326181_-	ncRNA_intronic
CAediting_580708	chr7_100326182_-	ncRNA_intronic
CAediting_580709	chr7_100326184_-	ncRNA_intronic
CAediting_580710	chr7_100326187_-	ncRNA_intronic
CAediting_580711	chr7_100326188_-	ncRNA_intronic
CAediting_580712	chr7_100326189_-	ncRNA_intronic
CAediting_580713	chr7_100326193_-	ncRNA_intronic
CAediting_580714	chr7_100326204_-	ncRNA_intronic
CAediting_580715	chr7_100326206_-	ncRNA_intronic
CAediting_580716	chr7_100326215_-	ncRNA_intronic
CAediting_580717	chr7_100326243_-	ncRNA_intronic
CAediting_580718	chr7_100326246_-	ncRNA_intronic
CAediting_580719	chr7_100326740_-	ncRNA_intronic
CAediting_580720	chr7_100326784_-	ncRNA_intronic
CAediting_580721	chr7_100326786_-	ncRNA_intronic
CAediting_580722	chr7_100326791_-	ncRNA_intronic
CAediting_580723	chr7_100326811_-	ncRNA_intronic
CAediting_580724	chr7_100326815_-	ncRNA_intronic
CAediting_580725	chr7_100326846_-	ncRNA_intronic
CAediting_580726	chr7_100326855_-	ncRNA_intronic
CAediting_580727	chr7_100326856_-	ncRNA_intronic
CAediting_580728	chr7_100326921_-	ncRNA_intronic
CAediting_580729	chr7_100326951_-	ncRNA_intronic
CAediting_580730	chr7_100326965_-	ncRNA_intronic
CAediting_580731	chr7_100326970_-	ncRNA_intronic
CAediting_580732	chr7_100327461_-	ncRNA_intronic
CAediting_580733	chr7_100327478_-	ncRNA_intronic
CAediting_580734	chr7_100327547_-	ncRNA_intronic
CAediting_580735	chr7_100327697_-	ncRNA_intronic
CAediting_580736	chr7_100328123_-	ncRNA_intronic
CAediting_580737	chr7_100328135_-	ncRNA_intronic
CAediting_580738	chr7_100328150_-	ncRNA_intronic
CAediting_580739	chr7_100328158_-	ncRNA_intronic
CAediting_580740	chr7_100328232_-	ncRNA_intronic
CAediting_580741	chr7_100328240_-	ncRNA_intronic
CAediting_580742	chr7_100328254_-	ncRNA_intronic
CAediting_580743	chr7_100328261_-	ncRNA_intronic
CAediting_580744	chr7_100328265_-	ncRNA_intronic
CAediting_580745	chr7_100328267_-	ncRNA_intronic
CAediting_580746	chr7_100328273_-	ncRNA_intronic
CAediting_580747	chr7_100328277_-	ncRNA_intronic
CAediting_580748	chr7_100328289_-	ncRNA_intronic
CAediting_580749	chr7_100328306_-	ncRNA_intronic
CAediting_580750	chr7_100328307_-	ncRNA_intronic
CAediting_580751	chr7_100328312_-	ncRNA_intronic
CAediting_580752	chr7_100328313_-	ncRNA_intronic
CAediting_580753	chr7_100328320_-	ncRNA_intronic
CAediting_580754	chr7_100328332_-	ncRNA_intronic
CAediting_580755	chr7_100328337_-	ncRNA_intronic
CAediting_580756	chr7_100328375_-	ncRNA_intronic
CAediting_580757	chr7_100328458_-	ncRNA_intronic
CAediting_580758	chr7_100328461_-	ncRNA_intronic
CAediting_580759	chr7_100328493_-	ncRNA_intronic
CAediting_580760	chr7_100328496_-	ncRNA_intronic
CAediting_580761	chr7_100328500_-	ncRNA_intronic
CAediting_580762	chr7_100328504_-	ncRNA_intronic
CAediting_580763	chr7_100328530_-	ncRNA_intronic
CAediting_580764	chr7_100328542_-	ncRNA_intronic
CAediting_580765	chr7_100328556_-	ncRNA_intronic
CAediting_580766	chr7_100328566_-	ncRNA_intronic
CAediting_580767	chr7_100328572_-	ncRNA_intronic
CAediting_580768	chr7_100328591_-	ncRNA_intronic
CAediting_580769	chr7_100328596_-	ncRNA_intronic
CAediting_580770	chr7_100328597_-	ncRNA_intronic
CAediting_580771	chr7_100328631_-	ncRNA_intronic
CAediting_580772	chr7_100329646_-	ncRNA_intronic
CAediting_580773	chr7_100330951_-	ncRNA_intronic
CAediting_580774	chr7_100331016_-	ncRNA_intronic
CAediting_580775	chr7_100331125_-	ncRNA_intronic
CAediting_580776	chr7_100331528_-	ncRNA_intronic
CAediting_580777	chr7_100331529_-	ncRNA_intronic
CAediting_580778	chr7_100331845_-	ncRNA_intronic
CAediting_580779	chr7_100331852_-	ncRNA_intronic
CAediting_580780	chr7_100332110_-	ncRNA_intronic
CAediting_580781	chr7_100333045_-	ncRNA_intronic
CAediting_580782	chr7_100333130_-	ncRNA_intronic
CAediting_580783	chr7_100333136_-	ncRNA_intronic
CAediting_580784	chr7_100333141_-	ncRNA_intronic
CAediting_580785	chr7_100333146_-	ncRNA_intronic
CAediting_580786	chr7_100333154_-	ncRNA_intronic
CAediting_580787	chr7_100333167_-	ncRNA_intronic
CAediting_580788	chr7_100334070_-	ncRNA_intronic
CAediting_580789	chr7_100334106_-	ncRNA_intronic
CAediting_580790	chr7_100334108_-	ncRNA_intronic
CAediting_580791	chr7_100334132_-	ncRNA_intronic
CAediting_580792	chr7_100334139_-	ncRNA_intronic
CAediting_580793	chr7_100334241_-	ncRNA_intronic
CAediting_580794	chr7_100334731_-	ncRNA_intronic
CAediting_580795	chr7_100334853_-	ncRNA_intronic
CAediting_580796	chr7_100335330_-	ncRNA_intronic
CAediting_580797	chr7_100335336_-	ncRNA_intronic
CAediting_580798	chr7_100335338_-	ncRNA_intronic
CAediting_580799	chr7_100335350_-	ncRNA_intronic
CAediting_580800	chr7_100335351_-	ncRNA_intronic
CAediting_580801	chr7_100335352_-	ncRNA_intronic
CAediting_580802	chr7_100335374_-	ncRNA_intronic
CAediting_580803	chr7_100335377_-	ncRNA_intronic
CAediting_580804	chr7_100335378_-	ncRNA_intronic
CAediting_580805	chr7_100335402_-	ncRNA_intronic
CAediting_580806	chr7_100335403_-	ncRNA_intronic
CAediting_580807	chr7_100335428_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_580657	chr7_100322793_-	SINE	Alu	AluSx1
CAediting_580658	chr7_100322799_-	SINE	Alu	AluSx1
CAediting_580659	chr7_100322843_-	SINE	Alu	AluSx1
CAediting_580660	chr7_100322936_-	SINE	Alu	AluSx1
CAediting_580661	chr7_100322947_-	SINE	Alu	AluSx1
CAediting_580662	chr7_100322950_-	SINE	Alu	AluSx1
CAediting_580663	chr7_100323182_-	SINE	Alu	AluYm1
CAediting_580664	chr7_100323195_-	SINE	Alu	AluYm1
CAediting_580665	chr7_100323204_-	SINE	Alu	AluYm1
CAediting_580666	chr7_100323249_-	SINE	Alu	AluYm1
CAediting_580667	chr7_100323252_-	SINE	Alu	AluYm1
CAediting_580668	chr7_100323326_-	SINE	Alu	AluYm1
CAediting_580669	chr7_100323376_-	SINE	Alu	AluYm1
CAediting_580670	chr7_100323400_-	SINE	Alu	AluYm1
CAediting_580671	chr7_100323558_-	SINE	Alu	FRAM
CAediting_580672	chr7_100323589_-	SINE	Alu	FRAM
CAediting_580673	chr7_100323601_-	SINE	Alu	FRAM
CAediting_580674	chr7_100323991_-	SINE	Alu	AluSx
CAediting_580675	chr7_100324091_-	SINE	Alu	AluSx
CAediting_580676	chr7_100324099_-	SINE	Alu	AluSx
CAediting_580677	chr7_100324100_-	SINE	Alu	AluSx
CAediting_580678	chr7_100324117_-	SINE	Alu	AluSx
CAediting_580679	chr7_100324121_-	SINE	Alu	AluSx
CAediting_580680	chr7_100324890_-	SINE	Alu	AluSg7
CAediting_580681	chr7_100324899_-	SINE	Alu	AluSg7
CAediting_580682	chr7_100324920_-	SINE	Alu	AluSg7
CAediting_580683	chr7_100324921_-	SINE	Alu	AluSg7
CAediting_580684	chr7_100324942_-	SINE	Alu	AluSg7
CAediting_580685	chr7_100324943_-	SINE	Alu	AluSg7
CAediting_580686	chr7_100325004_-	SINE	Alu	AluSq2
CAediting_580687	chr7_100325063_-	SINE	Alu	AluSq2
CAediting_580688	chr7_100325068_-	SINE	Alu	AluSq2
CAediting_580689	chr7_100325077_-	SINE	Alu	AluSq2
CAediting_580690	chr7_100325098_-	SINE	Alu	AluSq2
CAediting_580691	chr7_100325103_-	SINE	Alu	AluSq2
CAediting_580692	chr7_100325104_-	SINE	Alu	AluSq2
CAediting_580693	chr7_100325256_-	SINE	Alu	AluSq2
CAediting_580694	chr7_100326050_-	SINE	Alu	AluSg
CAediting_580695	chr7_100326054_-	SINE	Alu	AluSg
CAediting_580696	chr7_100326088_-	SINE	Alu	AluSg
CAediting_580697	chr7_100326108_-	SINE	Alu	AluSg
CAediting_580698	chr7_100326109_-	SINE	Alu	AluSg
CAediting_580699	chr7_100326123_-	SINE	Alu	AluSg
CAediting_580700	chr7_100326127_-	SINE	Alu	AluSg
CAediting_580701	chr7_100326140_-	SINE	Alu	AluSg
CAediting_580702	chr7_100326150_-	SINE	Alu	AluSg
CAediting_580703	chr7_100326171_-	SINE	Alu	AluSg
CAediting_580704	chr7_100326175_-	SINE	Alu	AluSg
CAediting_580705	chr7_100326178_-	SINE	Alu	AluSg
CAediting_580706	chr7_100326179_-	SINE	Alu	AluSg
CAediting_580707	chr7_100326181_-	SINE	Alu	AluSg
CAediting_580708	chr7_100326182_-	SINE	Alu	AluSg
CAediting_580709	chr7_100326184_-	SINE	Alu	AluSg
CAediting_580710	chr7_100326187_-	SINE	Alu	AluSg
CAediting_580711	chr7_100326188_-	SINE	Alu	AluSg
CAediting_580712	chr7_100326189_-	SINE	Alu	AluSg
CAediting_580713	chr7_100326193_-	SINE	Alu	AluSg
CAediting_580714	chr7_100326204_-	SINE	Alu	AluSg
CAediting_580715	chr7_100326206_-	SINE	Alu	AluSg
CAediting_580716	chr7_100326215_-	SINE	Alu	AluSg
CAediting_580717	chr7_100326243_-	SINE	Alu	AluSg
CAediting_580718	chr7_100326246_-	SINE	Alu	AluSg
CAediting_580719	chr7_100326740_-	SINE	Alu	AluSq2
CAediting_580720	chr7_100326784_-	SINE	Alu	AluSq2
CAediting_580721	chr7_100326786_-	SINE	Alu	AluSq2
CAediting_580722	chr7_100326791_-	SINE	Alu	AluSq2
CAediting_580723	chr7_100326811_-	SINE	Alu	AluSq2
CAediting_580724	chr7_100326815_-	SINE	Alu	AluSq2
CAediting_580725	chr7_100326846_-	SINE	Alu	AluSq2
CAediting_580726	chr7_100326855_-	SINE	Alu	AluSq2
CAediting_580727	chr7_100326856_-	SINE	Alu	AluSq2
CAediting_580728	chr7_100326921_-	SINE	Alu	AluSq2
CAediting_580729	chr7_100326951_-	SINE	Alu	AluSq2
CAediting_580730	chr7_100326965_-	SINE	Alu	AluSq2
CAediting_580731	chr7_100326970_-	SINE	Alu	AluSq2
CAediting_580732	chr7_100327461_-	SINE	Alu	AluSz
CAediting_580733	chr7_100327478_-	SINE	Alu	AluSz
CAediting_580734	chr7_100327547_-	SINE	Alu	AluSz
CAediting_580735	chr7_100327697_-	SINE	Alu	AluSz
CAediting_580736	chr7_100328123_-	SINE	Alu	AluSx
CAediting_580737	chr7_100328135_-	SINE	Alu	AluSx
CAediting_580738	chr7_100328150_-	SINE	Alu	AluSx
CAediting_580739	chr7_100328158_-	SINE	Alu	AluSx
CAediting_580740	chr7_100328232_-	SINE	Alu	AluSx
CAediting_580741	chr7_100328240_-	SINE	Alu	AluSx
CAediting_580742	chr7_100328254_-	SINE	Alu	AluSx
CAediting_580743	chr7_100328261_-	SINE	Alu	AluSx
CAediting_580744	chr7_100328265_-	SINE	Alu	AluSx
CAediting_580745	chr7_100328267_-	SINE	Alu	AluSx
CAediting_580746	chr7_100328273_-	SINE	Alu	AluSx
CAediting_580747	chr7_100328277_-	SINE	Alu	AluSx
CAediting_580748	chr7_100328289_-	SINE	Alu	AluSx
CAediting_580749	chr7_100328306_-	SINE	Alu	AluSx
CAediting_580750	chr7_100328307_-	SINE	Alu	AluSx
CAediting_580751	chr7_100328312_-	SINE	Alu	AluSx
CAediting_580752	chr7_100328313_-	SINE	Alu	AluSx
CAediting_580753	chr7_100328320_-	SINE	Alu	AluSx
CAediting_580754	chr7_100328332_-	SINE	Alu	AluSx
CAediting_580755	chr7_100328337_-	SINE	Alu	AluSx
CAediting_580756	chr7_100328375_-	SINE	Alu	AluSx
CAediting_580757	chr7_100328458_-	SINE	Alu	AluJr
CAediting_580758	chr7_100328461_-	SINE	Alu	AluJr
CAediting_580759	chr7_100328493_-	SINE	Alu	AluJr
CAediting_580760	chr7_100328496_-	SINE	Alu	AluJr
CAediting_580761	chr7_100328500_-	SINE	Alu	AluJr
CAediting_580762	chr7_100328504_-	SINE	Alu	AluJr
CAediting_580763	chr7_100328530_-	SINE	Alu	AluJr
CAediting_580764	chr7_100328542_-	SINE	Alu	AluJr
CAediting_580765	chr7_100328556_-	SINE	Alu	AluJr
CAediting_580766	chr7_100328566_-	SINE	Alu	AluJr
CAediting_580767	chr7_100328572_-	SINE	Alu	AluJr
CAediting_580768	chr7_100328591_-	SINE	Alu	AluJr
CAediting_580769	chr7_100328596_-	SINE	Alu	AluJr
CAediting_580770	chr7_100328597_-	SINE	Alu	AluJr
CAediting_580771	chr7_100328631_-	SINE	Alu	AluJr
CAediting_580772	chr7_100329646_-	SINE	Alu	AluSz6
CAediting_580773	chr7_100330951_-	SINE	Alu	AluSp
CAediting_580774	chr7_100331016_-	SINE	Alu	AluSp
CAediting_580775	chr7_100331125_-	SINE	Alu	AluSp
CAediting_580776	chr7_100331528_-	SINE	Alu	AluSz
CAediting_580777	chr7_100331529_-	SINE	Alu	AluSz
CAediting_580778	chr7_100331845_-	SINE	Alu	AluSx1
CAediting_580779	chr7_100331852_-	SINE	Alu	AluSx1
CAediting_580780	chr7_100332110_-	SINE	Alu	AluSz
CAediting_580781	chr7_100333045_-	SINE	Alu	AluSq2
CAediting_580782	chr7_100333130_-	SINE	Alu	AluSq2
CAediting_580783	chr7_100333136_-	SINE	Alu	AluSq2
CAediting_580784	chr7_100333141_-	SINE	Alu	AluSq2
CAediting_580785	chr7_100333146_-	SINE	Alu	AluSq2
CAediting_580786	chr7_100333154_-	SINE	Alu	AluSq2
CAediting_580787	chr7_100333167_-	SINE	Alu	AluSq2
CAediting_580788	chr7_100334070_-	SINE	Alu	AluSx1
CAediting_580789	chr7_100334106_-	SINE	Alu	AluSx1
CAediting_580790	chr7_100334108_-	SINE	Alu	AluSx1
CAediting_580791	chr7_100334132_-	SINE	Alu	AluSx1
CAediting_580792	chr7_100334139_-	SINE	Alu	AluSx1
CAediting_580793	chr7_100334241_-	SINE	Alu	AluSx1
CAediting_580794	chr7_100334731_-	SINE	Alu	AluSx1
CAediting_580795	chr7_100334853_-	SINE	Alu	AluSx1
CAediting_580796	chr7_100335330_-	SINE	Alu	AluJo
CAediting_580797	chr7_100335336_-	SINE	Alu	AluJo
CAediting_580798	chr7_100335338_-	SINE	Alu	AluJo
CAediting_580799	chr7_100335350_-	SINE	Alu	AluJo
CAediting_580800	chr7_100335351_-	SINE	Alu	AluJo
CAediting_580801	chr7_100335352_-	SINE	Alu	AluJo
CAediting_580802	chr7_100335374_-	SINE	Alu	AluJo
CAediting_580803	chr7_100335377_-	SINE	Alu	AluJo
CAediting_580804	chr7_100335378_-	SINE	Alu	AluJo
CAediting_580805	chr7_100335402_-	SINE	Alu	AluJo
CAediting_580806	chr7_100335403_-	SINE	Alu	AluJo
CAediting_580807	chr7_100335428_-	SINE	Alu	AluJo

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RNA A-to-I editing events in the alternative splicing sites for PMS2P1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000078319.8.PMS2P1.

Correlation between RNA A-to-I editing and PSI for ENSG00000078319.8.PMS2P1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PMS2P1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

LAML.CAediting_580771.ENSG00000078319.PMS2P1.png
Soverview

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Protein coding region RNA A-to-I editings for PMS2P1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PMS2P1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PMS2P1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for PMS2P1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for PMS2P1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for PMS2P1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for PMS2P1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PMS2P1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene