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Editing gene: PML (CAeditome ID:5371)

Gene summary for PML

Gene summary

Gene information	Gene symbol	PML
	Gene ID	5371
	Gene name	PML nuclear body scaffold
	Synonyms	MYL\|PP8675\|RNF71\|TRIM19
	Cytomap	15q24.1
	Type of gene	protein-coding
	Description	protein PMLPML/RARA fusionRING finger protein 71probable transcription factor PMLpromyelocytic leukemia proteinpromyelocytic leukemia, inducer oftripartite motif protein TRIM19tripartite motif-containing protein 19
	Modification date	20210518
	UniProtAcc	P29590
	Context	- 29416846(PML: Regulation and multifaceted function beyond tumor suppression)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
PML	GO:0051457	Protein PML	17332504
PML	GO:0016605	Protein PML	10910364
PML	GO:0001666	Protein PML	16915281
PML	GO:0030308	Protein PML	9448006
PML	GO:0034097	Protein PML	9412458
PML	GO:0043161	Protein PML	22406621
PML	GO:0045087	Protein PML	18248090
PML	GO:0045892	Protein PML	9448006
PML	GO:0065003	Protein PML	12915590
PML	GO:0090398	Protein PML	22002537
PML	GO:0090398	Protein PML	22117195
PML	GO:0090398	Protein PML	23431171
PML	GO:1902187	Protein PML	18248090
PML	GO:0000781	Protein PML	26119943
PML	GO:0005634	Protein PML	22274616
PML	GO:0005634	Protein PML	9412458
PML	GO:0005654	Protein PML	12915590
PML	GO:0005730	Protein PML	15195100
PML	GO:0005737	Protein PML	18298799
PML	GO:0016605	Protein PML	11331580
PML	GO:0016605	Protein PML	12917339
PML	GO:0016605	Protein PML	15195100
PML	GO:0016605	Protein PML	17081985
PML	GO:0016605	Protein PML	22155184
PML	GO:0016605	Protein PML	22869143
PML	GO:0016605	Protein PML	23007646
PML	GO:0016605	Protein PML	23431171
PML	GO:0016605	Protein PML	9412458
PML	GO:0016605	Protein PML	9448006

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RNA A-to-I events for PML

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000140464.18

RNA A-to-I editing events in Cancer.

CAediting_1059915(74000017, +), CAediting_1059916(74001457, +), CAediting_1059917(74001783, +), CAediting_1059918(74001784, +), CAediting_1059919(74001817, +), CAediting_1059920(74001837, +), CAediting_1059921(74001838, +), CAediting_1059922(74001839, +), CAediting_1059923(74001840, +), CAediting_1059924(74001844, +), CAediting_1059925(74001853, +), CAediting_1059926(74001883, +), CAediting_1059927(74001910, +), CAediting_1059928(74001924, +), CAediting_1059929(74001930, +), CAediting_1059930(74002508, +), CAediting_1059931(74002561, +), CAediting_1059932(74002706, +), CAediting_1059933(74002728, +), CAediting_1059934(74002870, +), CAediting_1059935(74002871, +), CAediting_1059936(74002877, +), CAediting_1059937(74002892, +), CAediting_1059938(74002948, +), CAediting_1059939(74002949, +), CAediting_1059940(74002950, +), CAediting_1059941(74003067, +), CAediting_1059942(74003179, +), CAediting_1059943(74003184, +), CAediting_1059944(74003205, +), CAediting_1059945(74003248, +), CAediting_1059946(74003279, +), CAediting_1059947(74003311, +), CAediting_1059948(74004141, +), CAediting_1059949(74004161, +), CAediting_1059950(74004209, +), CAediting_1059951(74004210, +), CAediting_1059952(74004213, +), CAediting_1059953(74004222, +), CAediting_1059954(74004235, +), CAediting_1059955(74004243, +), CAediting_1059956(74004249, +), CAediting_1059957(74004434, +), CAediting_1059958(74004491, +), CAediting_1059959(74004504, +), CAediting_1059960(74004521, +), CAediting_1059961(74004553, +), CAediting_1059962(74006135, +), CAediting_1059963(74006252, +), CAediting_1059964(74006260, +), CAediting_1059965(74006262, +), CAediting_1059966(74006264, +), CAediting_1059967(74006270, +), CAediting_1059968(74006271, +), CAediting_1059969(74006276, +), CAediting_1059970(74006280, +), CAediting_1059971(74006284, +), CAediting_1059972(74006308, +), CAediting_1059973(74006311, +), CAediting_1059974(74006312, +), CAediting_1059975(74006332, +), CAediting_1059976(74006346, +), CAediting_1059977(74006348, +), CAediting_1059978(74008484, +), CAediting_1059979(74008659, +), CAediting_1059980(74008689, +), CAediting_1059981(74009672, +), CAediting_1059982(74009704, +), CAediting_1059983(74009710, +), CAediting_1059984(74009711, +), CAediting_1059985(74009751, +), CAediting_1059986(74010081, +), CAediting_1059987(74010083, +), CAediting_1059988(74010088, +), CAediting_1059989(74010093, +), CAediting_1059990(74010107, +), CAediting_1059991(74010114, +), CAediting_1059992(74010380, +), CAediting_1059993(74010437, +), CAediting_1059994(74010443, +), CAediting_1059995(74014450, +), CAediting_1059996(74014458, +), CAediting_1059997(74014604, +), CAediting_1059998(74014727, +), CAediting_1059999(74017446, +), CAediting_1060000(74017471, +), CAediting_1060001(74017487, +), CAediting_1060002(74017502, +), CAediting_1060003(74017604, +), CAediting_1060004(74020343, +), CAediting_1060005(74020354, +), CAediting_1060006(74020370, +), CAediting_1060007(74020376, +), CAediting_1060008(74022231, +), CAediting_1060009(74024861, +), CAediting_1060010(74025207, +), CAediting_1060011(74025239, +), CAediting_1060012(74025271, +), CAediting_1060013(74025513, +), CAediting_1060014(74025519, +), CAediting_1060015(74025520, +), CAediting_1060016(74026190, +), CAediting_1060017(74026195, +), CAediting_1060018(74026214, +), CAediting_1060019(74026235, +), CAediting_1060020(74026270, +), CAediting_1060021(74026271, +), CAediting_1060022(74026275, +), CAediting_1060023(74026297, +), CAediting_1060024(74026300, +), CAediting_1060025(74026310, +), CAediting_1060026(74026312, +), CAediting_1060027(74026320, +), CAediting_1060028(74026336, +), CAediting_1060029(74026337, +), CAediting_1060030(74026352, +), CAediting_1060031(74026355, +), CAediting_1060032(74026374, +), CAediting_1060033(74026381, +), CAediting_1060034(74026431, +), CAediting_1060035(74026432, +), CAediting_1060036(74026444, +), CAediting_1060037(74026672, +), CAediting_1060038(74026674, +), CAediting_1060039(74026676, +), CAediting_1060040(74026694, +), CAediting_1060041(74026701, +), CAediting_1060042(74026706, +), CAediting_1060043(74026715, +), CAediting_1060044(74026725, +), CAediting_1060045(74026730, +), CAediting_1060046(74026731, +), CAediting_1060047(74026750, +), CAediting_1060048(74026755, +), CAediting_1060049(74026768, +), CAediting_1060050(74026780, +), CAediting_1060051(74026790, +), CAediting_1060052(74026792, +), CAediting_1060053(74026796, +), CAediting_1060054(74026800, +), CAediting_1060055(74026812, +), CAediting_1060056(74026816, +), CAediting_1060057(74026832, +), CAediting_1060058(74026835, +), CAediting_1060059(74026857, +), CAediting_1060060(74026861, +), CAediting_1060061(74026872, +), CAediting_1060062(74026874, +), CAediting_1060063(74026886, +), CAediting_1060064(74026887, +), CAediting_1060065(74026904, +), CAediting_1060066(74026914, +), CAediting_1060067(74026915, +), CAediting_1060068(74026924, +), CAediting_1060069(74026927, +), CAediting_1060070(74026933, +), CAediting_1060071(74026935, +), CAediting_1060072(74027290, +), CAediting_1060073(74027296, +), CAediting_1060074(74027297, +), CAediting_1060075(74027298, +), CAediting_1060076(74027302, +), CAediting_1060077(74027315, +), CAediting_1060078(74027327, +), CAediting_1060079(74027337, +), CAediting_1060080(74027346, +), CAediting_1060081(74027353, +), CAediting_1060082(74027366, +), CAediting_1060083(74027376, +), CAediting_1060084(74027387, +), CAediting_1060085(74027390, +), CAediting_1060086(74027392, +), CAediting_1060087(74027393, +), CAediting_1060088(74027399, +), CAediting_1060089(74027400, +), CAediting_1060090(74027401, +), CAediting_1060091(74027402, +), CAediting_1060092(74027405, +), CAediting_1060093(74027409, +), CAediting_1060094(74027421, +), CAediting_1060095(74027423, +), CAediting_1060096(74027431, +), CAediting_1060097(74027432, +), CAediting_1060098(74027445, +), CAediting_1060099(74027448, +), CAediting_1060100(74027453, +), CAediting_1060101(74027454, +), CAediting_1060102(74027461, +), CAediting_1060103(74027467, +), CAediting_1060104(74027472, +), CAediting_1060105(74027477, +), CAediting_1060106(74027487, +), CAediting_1060107(74027498, +), CAediting_1060108(74027508, +), CAediting_1060109(74027510, +), CAediting_1060110(74027513, +), CAediting_1060111(74027523, +), CAediting_1060112(74027529, +), CAediting_1060113(74027569, +), CAediting_1060114(74029369, +), CAediting_1060115(74029440, +), CAediting_1060116(74029465, +), CAediting_1060117(74029468, +), CAediting_1060118(74029493, +), CAediting_1060119(74029503, +), CAediting_1060120(74029504, +), CAediting_1060121(74029513, +), CAediting_1060122(74029517, +), CAediting_1060123(74029539, +), CAediting_1060124(74029544, +), CAediting_1060125(74029545, +), CAediting_1060126(74029552, +), CAediting_1060127(74029556, +), CAediting_1060128(74029573, +), CAediting_1060129(74029579, +), CAediting_1060130(74029637, +), CAediting_1060131(74029641, +), CAediting_1060132(74030529, +), CAediting_1060133(74030542, +), CAediting_1060134(74030550, +), CAediting_1060135(74030570, +), CAediting_1060136(74030603, +), CAediting_1060137(74030660, +), CAediting_1060138(74030661, +), CAediting_1060139(74031330, +), CAediting_1060140(74031334, +), CAediting_1060141(74031338, +), CAediting_1060142(74031339, +), CAediting_1060143(74031373, +), CAediting_1060144(74031374, +), CAediting_1060145(74031399, +), CAediting_1060146(74031403, +), CAediting_1060147(74031413, +), CAediting_1060148(74032277, +), CAediting_1060149(74032293, +), CAediting_1060150(74032300, +), CAediting_1060151(74032301, +),

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RNA editing positional annotations for PML using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1059915	chr15_74000017_+	ncRNA_intronic
CAediting_1059916	chr15_74001457_+	ncRNA_intronic
CAediting_1059917	chr15_74001783_+	ncRNA_intronic
CAediting_1059918	chr15_74001784_+	ncRNA_intronic
CAediting_1059919	chr15_74001817_+	ncRNA_intronic
CAediting_1059920	chr15_74001837_+	ncRNA_intronic
CAediting_1059921	chr15_74001838_+	ncRNA_intronic
CAediting_1059922	chr15_74001839_+	ncRNA_intronic
CAediting_1059923	chr15_74001840_+	ncRNA_intronic
CAediting_1059924	chr15_74001844_+	ncRNA_intronic
CAediting_1059925	chr15_74001853_+	ncRNA_intronic
CAediting_1059926	chr15_74001883_+	ncRNA_intronic
CAediting_1059927	chr15_74001910_+	ncRNA_intronic
CAediting_1059928	chr15_74001924_+	ncRNA_intronic
CAediting_1059929	chr15_74001930_+	ncRNA_intronic
CAediting_1059930	chr15_74002508_+	ncRNA_intronic
CAediting_1059931	chr15_74002561_+	ncRNA_intronic
CAediting_1059932	chr15_74002706_+	ncRNA_intronic
CAediting_1059933	chr15_74002728_+	ncRNA_intronic
CAediting_1059934	chr15_74002870_+	ncRNA_intronic
CAediting_1059935	chr15_74002871_+	ncRNA_intronic
CAediting_1059936	chr15_74002877_+	ncRNA_intronic
CAediting_1059937	chr15_74002892_+	ncRNA_intronic
CAediting_1059938	chr15_74002948_+	ncRNA_intronic
CAediting_1059939	chr15_74002949_+	ncRNA_intronic
CAediting_1059940	chr15_74002950_+	ncRNA_intronic
CAediting_1059941	chr15_74003067_+	ncRNA_intronic
CAediting_1059942	chr15_74003179_+	ncRNA_intronic
CAediting_1059943	chr15_74003184_+	ncRNA_intronic
CAediting_1059944	chr15_74003205_+	ncRNA_intronic
CAediting_1059945	chr15_74003248_+	ncRNA_intronic
CAediting_1059946	chr15_74003279_+	ncRNA_intronic
CAediting_1059947	chr15_74003311_+	ncRNA_intronic
CAediting_1059948	chr15_74004141_+	ncRNA_intronic
CAediting_1059949	chr15_74004161_+	ncRNA_intronic
CAediting_1059950	chr15_74004209_+	ncRNA_intronic
CAediting_1059951	chr15_74004210_+	ncRNA_intronic
CAediting_1059952	chr15_74004213_+	ncRNA_intronic
CAediting_1059953	chr15_74004222_+	ncRNA_intronic
CAediting_1059954	chr15_74004235_+	ncRNA_intronic
CAediting_1059955	chr15_74004243_+	ncRNA_intronic
CAediting_1059956	chr15_74004249_+	ncRNA_intronic
CAediting_1059957	chr15_74004434_+	ncRNA_intronic
CAediting_1059958	chr15_74004491_+	ncRNA_intronic
CAediting_1059959	chr15_74004504_+	ncRNA_intronic
CAediting_1059960	chr15_74004521_+	ncRNA_intronic
CAediting_1059961	chr15_74004553_+	ncRNA_intronic
CAediting_1059962	chr15_74006135_+	ncRNA_intronic
CAediting_1059963	chr15_74006252_+	ncRNA_intronic
CAediting_1059964	chr15_74006260_+	ncRNA_intronic
CAediting_1059965	chr15_74006262_+	ncRNA_intronic
CAediting_1059966	chr15_74006264_+	ncRNA_intronic
CAediting_1059967	chr15_74006270_+	ncRNA_intronic
CAediting_1059968	chr15_74006271_+	ncRNA_intronic
CAediting_1059969	chr15_74006276_+	ncRNA_intronic
CAediting_1059970	chr15_74006280_+	ncRNA_intronic
CAediting_1059971	chr15_74006284_+	ncRNA_intronic
CAediting_1059972	chr15_74006308_+	ncRNA_intronic
CAediting_1059973	chr15_74006311_+	ncRNA_intronic
CAediting_1059974	chr15_74006312_+	ncRNA_intronic
CAediting_1059975	chr15_74006332_+	ncRNA_intronic
CAediting_1059976	chr15_74006346_+	ncRNA_intronic
CAediting_1059977	chr15_74006348_+	ncRNA_intronic
CAediting_1059978	chr15_74008484_+	ncRNA_intronic
CAediting_1059979	chr15_74008659_+	ncRNA_intronic
CAediting_1059980	chr15_74008689_+	ncRNA_intronic
CAediting_1059981	chr15_74009672_+	ncRNA_intronic
CAediting_1059982	chr15_74009704_+	ncRNA_intronic
CAediting_1059983	chr15_74009710_+	ncRNA_intronic
CAediting_1059984	chr15_74009711_+	ncRNA_intronic
CAediting_1059985	chr15_74009751_+	ncRNA_intronic
CAediting_1059986	chr15_74010081_+	ncRNA_intronic
CAediting_1059987	chr15_74010083_+	ncRNA_intronic
CAediting_1059988	chr15_74010088_+	ncRNA_intronic
CAediting_1059989	chr15_74010093_+	ncRNA_intronic
CAediting_1059990	chr15_74010107_+	ncRNA_intronic
CAediting_1059991	chr15_74010114_+	ncRNA_intronic
CAediting_1059992	chr15_74010380_+	ncRNA_intronic
CAediting_1059993	chr15_74010437_+	ncRNA_intronic
CAediting_1059994	chr15_74010443_+	ncRNA_intronic
CAediting_1059995	chr15_74014450_+	ncRNA_intronic
CAediting_1059996	chr15_74014458_+	ncRNA_intronic
CAediting_1059997	chr15_74014604_+	ncRNA_intronic
CAediting_1059998	chr15_74014727_+	ncRNA_intronic
CAediting_1059999	chr15_74017446_+	ncRNA_intronic
CAediting_1060000	chr15_74017471_+	ncRNA_intronic
CAediting_1060001	chr15_74017487_+	ncRNA_intronic
CAediting_1060002	chr15_74017502_+	ncRNA_intronic
CAediting_1060003	chr15_74017604_+	ncRNA_intronic
CAediting_1060004	chr15_74020343_+	ncRNA_intronic
CAediting_1060005	chr15_74020354_+	ncRNA_intronic
CAediting_1060006	chr15_74020370_+	ncRNA_intronic
CAediting_1060007	chr15_74020376_+	ncRNA_intronic
CAediting_1060008	chr15_74022231_+	ncRNA_intronic
CAediting_1060009	chr15_74024861_+	exonic
CAediting_1060010	chr15_74025207_+	ncRNA_exonic
CAediting_1060011	chr15_74025239_+	ncRNA_exonic
CAediting_1060012	chr15_74025271_+	ncRNA_exonic
CAediting_1060013	chr15_74025513_+	ncRNA_exonic
CAediting_1060014	chr15_74025519_+	ncRNA_exonic
CAediting_1060015	chr15_74025520_+	ncRNA_exonic
CAediting_1060016	chr15_74026190_+	ncRNA_exonic
CAediting_1060017	chr15_74026195_+	ncRNA_exonic
CAediting_1060018	chr15_74026214_+	ncRNA_exonic
CAediting_1060019	chr15_74026235_+	ncRNA_exonic
CAediting_1060020	chr15_74026270_+	ncRNA_exonic
CAediting_1060021	chr15_74026271_+	ncRNA_exonic
CAediting_1060022	chr15_74026275_+	ncRNA_exonic
CAediting_1060023	chr15_74026297_+	ncRNA_exonic
CAediting_1060024	chr15_74026300_+	ncRNA_exonic
CAediting_1060025	chr15_74026310_+	ncRNA_exonic
CAediting_1060026	chr15_74026312_+	ncRNA_exonic
CAediting_1060027	chr15_74026320_+	ncRNA_exonic
CAediting_1060028	chr15_74026336_+	ncRNA_exonic
CAediting_1060029	chr15_74026337_+	ncRNA_exonic
CAediting_1060030	chr15_74026352_+	ncRNA_exonic
CAediting_1060031	chr15_74026355_+	ncRNA_exonic
CAediting_1060032	chr15_74026374_+	ncRNA_exonic
CAediting_1060033	chr15_74026381_+	ncRNA_exonic
CAediting_1060034	chr15_74026431_+	ncRNA_exonic
CAediting_1060035	chr15_74026432_+	ncRNA_exonic
CAediting_1060036	chr15_74026444_+	ncRNA_exonic
CAediting_1060037	chr15_74026672_+	ncRNA_exonic
CAediting_1060038	chr15_74026674_+	ncRNA_exonic
CAediting_1060039	chr15_74026676_+	ncRNA_exonic
CAediting_1060040	chr15_74026694_+	ncRNA_exonic
CAediting_1060041	chr15_74026701_+	ncRNA_exonic
CAediting_1060042	chr15_74026706_+	ncRNA_exonic
CAediting_1060043	chr15_74026715_+	ncRNA_exonic
CAediting_1060044	chr15_74026725_+	ncRNA_exonic
CAediting_1060045	chr15_74026730_+	ncRNA_exonic
CAediting_1060046	chr15_74026731_+	ncRNA_exonic
CAediting_1060047	chr15_74026750_+	ncRNA_exonic
CAediting_1060048	chr15_74026755_+	ncRNA_exonic
CAediting_1060049	chr15_74026768_+	ncRNA_exonic
CAediting_1060050	chr15_74026780_+	ncRNA_exonic
CAediting_1060051	chr15_74026790_+	ncRNA_exonic
CAediting_1060052	chr15_74026792_+	ncRNA_exonic
CAediting_1060053	chr15_74026796_+	ncRNA_exonic
CAediting_1060054	chr15_74026800_+	ncRNA_exonic
CAediting_1060055	chr15_74026812_+	ncRNA_exonic
CAediting_1060056	chr15_74026816_+	ncRNA_exonic
CAediting_1060057	chr15_74026832_+	ncRNA_exonic
CAediting_1060058	chr15_74026835_+	ncRNA_exonic
CAediting_1060059	chr15_74026857_+	ncRNA_exonic
CAediting_1060060	chr15_74026861_+	ncRNA_exonic
CAediting_1060061	chr15_74026872_+	ncRNA_exonic
CAediting_1060062	chr15_74026874_+	ncRNA_exonic
CAediting_1060063	chr15_74026886_+	ncRNA_exonic
CAediting_1060064	chr15_74026887_+	ncRNA_exonic
CAediting_1060065	chr15_74026904_+	ncRNA_exonic
CAediting_1060066	chr15_74026914_+	ncRNA_exonic
CAediting_1060067	chr15_74026915_+	ncRNA_exonic
CAediting_1060068	chr15_74026924_+	ncRNA_exonic
CAediting_1060069	chr15_74026927_+	ncRNA_exonic
CAediting_1060070	chr15_74026933_+	ncRNA_exonic
CAediting_1060071	chr15_74026935_+	ncRNA_exonic
CAediting_1060072	chr15_74027290_+	ncRNA_exonic
CAediting_1060073	chr15_74027296_+	ncRNA_exonic
CAediting_1060074	chr15_74027297_+	ncRNA_exonic
CAediting_1060075	chr15_74027298_+	ncRNA_exonic
CAediting_1060076	chr15_74027302_+	ncRNA_exonic
CAediting_1060077	chr15_74027315_+	ncRNA_exonic
CAediting_1060078	chr15_74027327_+	ncRNA_exonic
CAediting_1060079	chr15_74027337_+	ncRNA_exonic
CAediting_1060080	chr15_74027346_+	ncRNA_exonic
CAediting_1060081	chr15_74027353_+	ncRNA_exonic
CAediting_1060082	chr15_74027366_+	ncRNA_exonic
CAediting_1060083	chr15_74027376_+	ncRNA_exonic
CAediting_1060084	chr15_74027387_+	ncRNA_exonic
CAediting_1060085	chr15_74027390_+	ncRNA_exonic
CAediting_1060086	chr15_74027392_+	ncRNA_exonic
CAediting_1060087	chr15_74027393_+	ncRNA_exonic
CAediting_1060088	chr15_74027399_+	ncRNA_exonic
CAediting_1060089	chr15_74027400_+	ncRNA_exonic
CAediting_1060090	chr15_74027401_+	ncRNA_exonic
CAediting_1060091	chr15_74027402_+	ncRNA_exonic
CAediting_1060092	chr15_74027405_+	ncRNA_exonic
CAediting_1060093	chr15_74027409_+	ncRNA_exonic
CAediting_1060094	chr15_74027421_+	ncRNA_exonic
CAediting_1060095	chr15_74027423_+	ncRNA_exonic
CAediting_1060096	chr15_74027431_+	ncRNA_exonic
CAediting_1060097	chr15_74027432_+	ncRNA_exonic
CAediting_1060098	chr15_74027445_+	ncRNA_exonic
CAediting_1060099	chr15_74027448_+	ncRNA_exonic
CAediting_1060100	chr15_74027453_+	ncRNA_exonic
CAediting_1060101	chr15_74027454_+	ncRNA_exonic
CAediting_1060102	chr15_74027461_+	ncRNA_exonic
CAediting_1060103	chr15_74027467_+	ncRNA_exonic
CAediting_1060104	chr15_74027472_+	ncRNA_exonic
CAediting_1060105	chr15_74027477_+	ncRNA_exonic
CAediting_1060106	chr15_74027487_+	ncRNA_exonic
CAediting_1060107	chr15_74027498_+	ncRNA_exonic
CAediting_1060108	chr15_74027508_+	ncRNA_exonic
CAediting_1060109	chr15_74027510_+	ncRNA_exonic
CAediting_1060110	chr15_74027513_+	ncRNA_exonic
CAediting_1060111	chr15_74027523_+	ncRNA_exonic
CAediting_1060112	chr15_74027529_+	ncRNA_exonic
CAediting_1060113	chr15_74027569_+	ncRNA_exonic
CAediting_1060114	chr15_74029369_+	ncRNA_intronic
CAediting_1060115	chr15_74029440_+	ncRNA_intronic
CAediting_1060116	chr15_74029465_+	ncRNA_intronic
CAediting_1060117	chr15_74029468_+	ncRNA_intronic
CAediting_1060118	chr15_74029493_+	ncRNA_intronic
CAediting_1060119	chr15_74029503_+	ncRNA_intronic
CAediting_1060120	chr15_74029504_+	ncRNA_intronic
CAediting_1060121	chr15_74029513_+	ncRNA_intronic
CAediting_1060122	chr15_74029517_+	ncRNA_intronic
CAediting_1060123	chr15_74029539_+	ncRNA_intronic
CAediting_1060124	chr15_74029544_+	ncRNA_intronic
CAediting_1060125	chr15_74029545_+	ncRNA_intronic
CAediting_1060126	chr15_74029552_+	ncRNA_intronic
CAediting_1060127	chr15_74029556_+	ncRNA_intronic
CAediting_1060128	chr15_74029573_+	ncRNA_intronic
CAediting_1060129	chr15_74029579_+	ncRNA_intronic
CAediting_1060130	chr15_74029637_+	ncRNA_intronic
CAediting_1060131	chr15_74029641_+	ncRNA_intronic
CAediting_1060132	chr15_74030529_+	ncRNA_intronic
CAediting_1060133	chr15_74030542_+	ncRNA_intronic
CAediting_1060134	chr15_74030550_+	ncRNA_intronic
CAediting_1060135	chr15_74030570_+	ncRNA_intronic
CAediting_1060136	chr15_74030603_+	ncRNA_intronic
CAediting_1060137	chr15_74030660_+	ncRNA_intronic
CAediting_1060138	chr15_74030661_+	ncRNA_intronic
CAediting_1060139	chr15_74031330_+	ncRNA_intronic
CAediting_1060140	chr15_74031334_+	ncRNA_intronic
CAediting_1060141	chr15_74031338_+	ncRNA_intronic
CAediting_1060142	chr15_74031339_+	ncRNA_intronic
CAediting_1060143	chr15_74031373_+	ncRNA_intronic
CAediting_1060144	chr15_74031374_+	ncRNA_intronic
CAediting_1060145	chr15_74031399_+	ncRNA_intronic
CAediting_1060146	chr15_74031403_+	ncRNA_intronic
CAediting_1060147	chr15_74031413_+	ncRNA_intronic
CAediting_1060148	chr15_74032277_+	ncRNA_intronic
CAediting_1060149	chr15_74032293_+	ncRNA_intronic
CAediting_1060150	chr15_74032300_+	ncRNA_intronic
CAediting_1060151	chr15_74032301_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1059915	chr15_74000017_+	SINE	Alu	AluSq10
CAediting_1059916	chr15_74001457_+	SINE	Alu	AluSx1
CAediting_1059917	chr15_74001783_+	SINE	Alu	AluJr
CAediting_1059918	chr15_74001784_+	SINE	Alu	AluJr
CAediting_1059919	chr15_74001817_+	SINE	Alu	AluJr
CAediting_1059920	chr15_74001837_+	SINE	Alu	AluJr
CAediting_1059921	chr15_74001838_+	SINE	Alu	AluJr
CAediting_1059922	chr15_74001839_+	SINE	Alu	AluJr
CAediting_1059923	chr15_74001840_+	SINE	Alu	AluJr
CAediting_1059924	chr15_74001844_+	SINE	Alu	AluJr
CAediting_1059925	chr15_74001853_+	SINE	Alu	AluJr
CAediting_1059926	chr15_74001883_+	SINE	Alu	AluJr
CAediting_1059927	chr15_74001910_+	SINE	Alu	AluJr
CAediting_1059928	chr15_74001924_+	SINE	Alu	AluJr
CAediting_1059929	chr15_74001930_+	SINE	Alu	AluJr
CAediting_1059930	chr15_74002508_+	SINE	Alu	AluSc8
CAediting_1059931	chr15_74002561_+	SINE	Alu	AluSc8
CAediting_1059932	chr15_74002706_+	SINE	Alu	AluSc8
CAediting_1059933	chr15_74002728_+	SINE	Alu	AluSc8
CAediting_1059934	chr15_74002870_+	SINE	Alu	AluJb
CAediting_1059935	chr15_74002871_+	SINE	Alu	AluJb
CAediting_1059936	chr15_74002877_+	SINE	Alu	AluJb
CAediting_1059937	chr15_74002892_+	SINE	Alu	AluJb
CAediting_1059938	chr15_74002948_+	SINE	Alu	AluJb
CAediting_1059939	chr15_74002949_+	SINE	Alu	AluJb
CAediting_1059940	chr15_74002950_+	SINE	Alu	AluJb
CAediting_1059941	chr15_74003067_+	SINE	Alu	AluJb
CAediting_1059942	chr15_74003179_+	SINE	Alu	AluSq4
CAediting_1059943	chr15_74003184_+	SINE	Alu	AluSq4
CAediting_1059944	chr15_74003205_+	SINE	Alu	AluSq4
CAediting_1059945	chr15_74003248_+	SINE	Alu	AluSq4
CAediting_1059946	chr15_74003279_+	SINE	Alu	AluSq4
CAediting_1059947	chr15_74003311_+	SINE	Alu	AluSq4
CAediting_1059948	chr15_74004141_+	SINE	Alu	FRAM
CAediting_1059949	chr15_74004161_+	SINE	Alu	FRAM
CAediting_1059950	chr15_74004209_+	SINE	Alu	FRAM
CAediting_1059951	chr15_74004210_+	SINE	Alu	FRAM
CAediting_1059952	chr15_74004213_+	SINE	Alu	FRAM
CAediting_1059953	chr15_74004222_+	SINE	Alu	FRAM
CAediting_1059954	chr15_74004235_+	SINE	Alu	FRAM
CAediting_1059955	chr15_74004243_+	SINE	Alu	FRAM
CAediting_1059956	chr15_74004249_+	SINE	Alu	FRAM
CAediting_1059957	chr15_74004434_+	SINE	Alu	AluJr4
CAediting_1059958	chr15_74004491_+	SINE	Alu	AluJr4
CAediting_1059959	chr15_74004504_+	SINE	Alu	AluJr4
CAediting_1059960	chr15_74004521_+	SINE	Alu	AluJr4
CAediting_1059961	chr15_74004553_+	SINE	Alu	AluJr4
CAediting_1059962	chr15_74006135_+	SINE	Alu	AluSx
CAediting_1059963	chr15_74006252_+	SINE	Alu	AluSx
CAediting_1059964	chr15_74006260_+	SINE	Alu	AluSx
CAediting_1059965	chr15_74006262_+	SINE	Alu	AluSx
CAediting_1059966	chr15_74006264_+	SINE	Alu	AluSx
CAediting_1059967	chr15_74006270_+	SINE	Alu	AluSx
CAediting_1059968	chr15_74006271_+	SINE	Alu	AluSx
CAediting_1059969	chr15_74006276_+	SINE	Alu	AluSx
CAediting_1059970	chr15_74006280_+	SINE	Alu	AluSx
CAediting_1059971	chr15_74006284_+	SINE	Alu	AluSx
CAediting_1059972	chr15_74006308_+	SINE	Alu	AluSx
CAediting_1059973	chr15_74006311_+	SINE	Alu	AluSx
CAediting_1059974	chr15_74006312_+	SINE	Alu	AluSx
CAediting_1059975	chr15_74006332_+	SINE	Alu	AluSx
CAediting_1059976	chr15_74006346_+	SINE	Alu	AluSx
CAediting_1059977	chr15_74006348_+	SINE	Alu	AluSx
CAediting_1059978	chr15_74008484_+	SINE	Alu	AluY
CAediting_1059979	chr15_74008659_+	SINE	Alu	AluY
CAediting_1059980	chr15_74008689_+	SINE	Alu	AluY
CAediting_1059981	chr15_74009672_+	SINE	Alu	AluJb
CAediting_1059982	chr15_74009704_+	SINE	Alu	AluJb
CAediting_1059983	chr15_74009710_+	SINE	Alu	AluJb
CAediting_1059984	chr15_74009711_+	SINE	Alu	AluJb
CAediting_1059985	chr15_74009751_+	SINE	Alu	AluJb
CAediting_1059986	chr15_74010081_+	SINE	Alu	AluJb
CAediting_1059987	chr15_74010083_+	SINE	Alu	AluJb
CAediting_1059988	chr15_74010088_+	SINE	Alu	AluJb
CAediting_1059989	chr15_74010093_+	SINE	Alu	AluJb
CAediting_1059990	chr15_74010107_+	SINE	Alu	AluJb
CAediting_1059991	chr15_74010114_+	SINE	Alu	AluJb
CAediting_1059992	chr15_74010380_+	SINE	Alu	AluJb
CAediting_1059993	chr15_74010437_+	SINE	Alu	AluJb
CAediting_1059994	chr15_74010443_+	SINE	Alu	AluJb
CAediting_1059995	chr15_74014450_+	SINE	Alu	AluSx1
CAediting_1059996	chr15_74014458_+	SINE	Alu	AluSx1
CAediting_1059997	chr15_74014604_+	SINE	Alu	AluSg4
CAediting_1059998	chr15_74014727_+	SINE	Alu	AluSg4
CAediting_1059999	chr15_74017446_+	SINE	Alu	AluSx
CAediting_1060000	chr15_74017471_+	SINE	Alu	AluSx
CAediting_1060001	chr15_74017487_+	SINE	Alu	AluSx
CAediting_1060002	chr15_74017502_+	SINE	Alu	AluSx
CAediting_1060003	chr15_74017604_+	SINE	Alu	AluSx
CAediting_1060004	chr15_74020343_+	SINE	Alu	AluSx
CAediting_1060005	chr15_74020354_+	SINE	Alu	AluSx
CAediting_1060006	chr15_74020370_+	SINE	Alu	AluSx
CAediting_1060007	chr15_74020376_+	SINE	Alu	AluSx
CAediting_1060008	chr15_74022231_+	SINE	Alu	AluSp
CAediting_1060010	chr15_74025207_+	LINE	CR1	L3
CAediting_1060011	chr15_74025239_+	LINE	CR1	L3
CAediting_1060016	chr15_74026190_+	SINE	Alu	AluSx4
CAediting_1060017	chr15_74026195_+	SINE	Alu	AluSx4
CAediting_1060018	chr15_74026214_+	SINE	Alu	AluSx4
CAediting_1060019	chr15_74026235_+	SINE	Alu	AluSx4
CAediting_1060020	chr15_74026270_+	SINE	Alu	AluSx4
CAediting_1060021	chr15_74026271_+	SINE	Alu	AluSx4
CAediting_1060022	chr15_74026275_+	SINE	Alu	AluSx4
CAediting_1060023	chr15_74026297_+	SINE	Alu	AluSx4
CAediting_1060024	chr15_74026300_+	SINE	Alu	AluSx4
CAediting_1060025	chr15_74026310_+	SINE	Alu	AluSx4
CAediting_1060026	chr15_74026312_+	SINE	Alu	AluSx4
CAediting_1060027	chr15_74026320_+	SINE	Alu	AluSx4
CAediting_1060028	chr15_74026336_+	SINE	Alu	AluSx4
CAediting_1060029	chr15_74026337_+	SINE	Alu	AluSx4
CAediting_1060030	chr15_74026352_+	SINE	Alu	AluSx4
CAediting_1060031	chr15_74026355_+	SINE	Alu	AluSx4
CAediting_1060032	chr15_74026374_+	SINE	Alu	AluSx4
CAediting_1060033	chr15_74026381_+	SINE	Alu	AluSx4
CAediting_1060034	chr15_74026431_+	SINE	Alu	AluSx4
CAediting_1060035	chr15_74026432_+	SINE	Alu	AluSx4
CAediting_1060036	chr15_74026444_+	SINE	Alu	AluSx4
CAediting_1060037	chr15_74026672_+	SINE	Alu	AluSz6
CAediting_1060038	chr15_74026674_+	SINE	Alu	AluSz6
CAediting_1060039	chr15_74026676_+	SINE	Alu	AluSz6
CAediting_1060040	chr15_74026694_+	SINE	Alu	AluSz6
CAediting_1060041	chr15_74026701_+	SINE	Alu	AluSz6
CAediting_1060042	chr15_74026706_+	SINE	Alu	AluSz6
CAediting_1060043	chr15_74026715_+	SINE	Alu	AluSz6
CAediting_1060044	chr15_74026725_+	SINE	Alu	AluSz6
CAediting_1060045	chr15_74026730_+	SINE	Alu	AluSz6
CAediting_1060046	chr15_74026731_+	SINE	Alu	AluSz6
CAediting_1060047	chr15_74026750_+	SINE	Alu	AluSz6
CAediting_1060048	chr15_74026755_+	SINE	Alu	AluSz6
CAediting_1060049	chr15_74026768_+	SINE	Alu	AluSz6
CAediting_1060050	chr15_74026780_+	SINE	Alu	AluSz6
CAediting_1060051	chr15_74026790_+	SINE	Alu	AluSz6
CAediting_1060052	chr15_74026792_+	SINE	Alu	AluSz6
CAediting_1060053	chr15_74026796_+	SINE	Alu	AluSz6
CAediting_1060054	chr15_74026800_+	SINE	Alu	AluSz6
CAediting_1060055	chr15_74026812_+	SINE	Alu	AluSz6
CAediting_1060056	chr15_74026816_+	SINE	Alu	AluSz6
CAediting_1060057	chr15_74026832_+	SINE	Alu	AluSz6
CAediting_1060058	chr15_74026835_+	SINE	Alu	AluSz6
CAediting_1060059	chr15_74026857_+	SINE	Alu	AluSz6
CAediting_1060060	chr15_74026861_+	SINE	Alu	AluSz6
CAediting_1060061	chr15_74026872_+	SINE	Alu	AluSz6
CAediting_1060062	chr15_74026874_+	SINE	Alu	AluSz6
CAediting_1060063	chr15_74026886_+	SINE	Alu	AluSz6
CAediting_1060064	chr15_74026887_+	SINE	Alu	AluSz6
CAediting_1060065	chr15_74026904_+	SINE	Alu	AluSz6
CAediting_1060066	chr15_74026914_+	SINE	Alu	AluSz6
CAediting_1060067	chr15_74026915_+	SINE	Alu	AluSz6
CAediting_1060068	chr15_74026924_+	SINE	Alu	AluSz6
CAediting_1060069	chr15_74026927_+	SINE	Alu	AluSz6
CAediting_1060070	chr15_74026933_+	SINE	Alu	AluSz6
CAediting_1060071	chr15_74026935_+	SINE	Alu	AluSz6
CAediting_1060072	chr15_74027290_+	SINE	Alu	AluJr
CAediting_1060073	chr15_74027296_+	SINE	Alu	AluJr
CAediting_1060074	chr15_74027297_+	SINE	Alu	AluJr
CAediting_1060075	chr15_74027298_+	SINE	Alu	AluJr
CAediting_1060076	chr15_74027302_+	SINE	Alu	AluJr
CAediting_1060077	chr15_74027315_+	SINE	Alu	AluJr
CAediting_1060078	chr15_74027327_+	SINE	Alu	AluJr
CAediting_1060079	chr15_74027337_+	SINE	Alu	AluJr
CAediting_1060080	chr15_74027346_+	SINE	Alu	AluJr
CAediting_1060081	chr15_74027353_+	SINE	Alu	AluJr
CAediting_1060082	chr15_74027366_+	SINE	Alu	AluJr
CAediting_1060083	chr15_74027376_+	SINE	Alu	AluJr
CAediting_1060084	chr15_74027387_+	SINE	Alu	AluJr
CAediting_1060085	chr15_74027390_+	SINE	Alu	AluJr
CAediting_1060086	chr15_74027392_+	SINE	Alu	AluJr
CAediting_1060087	chr15_74027393_+	SINE	Alu	AluJr
CAediting_1060088	chr15_74027399_+	SINE	Alu	AluJr
CAediting_1060089	chr15_74027400_+	SINE	Alu	AluJr
CAediting_1060090	chr15_74027401_+	SINE	Alu	AluJr
CAediting_1060091	chr15_74027402_+	SINE	Alu	AluJr
CAediting_1060092	chr15_74027405_+	SINE	Alu	AluJr
CAediting_1060093	chr15_74027409_+	SINE	Alu	AluJr
CAediting_1060094	chr15_74027421_+	SINE	Alu	AluJr
CAediting_1060095	chr15_74027423_+	SINE	Alu	AluJr
CAediting_1060096	chr15_74027431_+	SINE	Alu	AluJr
CAediting_1060097	chr15_74027432_+	SINE	Alu	AluJr
CAediting_1060098	chr15_74027445_+	SINE	Alu	AluJr
CAediting_1060099	chr15_74027448_+	SINE	Alu	AluJr
CAediting_1060100	chr15_74027453_+	SINE	Alu	AluJr
CAediting_1060101	chr15_74027454_+	SINE	Alu	AluJr
CAediting_1060102	chr15_74027461_+	SINE	Alu	AluJr
CAediting_1060103	chr15_74027467_+	SINE	Alu	AluJr
CAediting_1060104	chr15_74027472_+	SINE	Alu	AluJr
CAediting_1060105	chr15_74027477_+	SINE	Alu	AluJr
CAediting_1060106	chr15_74027487_+	SINE	Alu	AluJr
CAediting_1060107	chr15_74027498_+	SINE	Alu	AluJr
CAediting_1060108	chr15_74027508_+	SINE	Alu	AluJr
CAediting_1060109	chr15_74027510_+	SINE	Alu	AluJr
CAediting_1060110	chr15_74027513_+	SINE	Alu	AluJr
CAediting_1060111	chr15_74027523_+	SINE	Alu	AluJr
CAediting_1060112	chr15_74027529_+	SINE	Alu	AluJr
CAediting_1060113	chr15_74027569_+	SINE	Alu	AluJr
CAediting_1060114	chr15_74029369_+	SINE	Alu	AluSq
CAediting_1060115	chr15_74029440_+	SINE	Alu	AluSq
CAediting_1060116	chr15_74029465_+	SINE	Alu	AluSq
CAediting_1060117	chr15_74029468_+	SINE	Alu	AluSq
CAediting_1060118	chr15_74029493_+	SINE	Alu	AluSq
CAediting_1060119	chr15_74029503_+	SINE	Alu	AluSq
CAediting_1060120	chr15_74029504_+	SINE	Alu	AluSq
CAediting_1060121	chr15_74029513_+	SINE	Alu	AluSq
CAediting_1060122	chr15_74029517_+	SINE	Alu	AluSq
CAediting_1060123	chr15_74029539_+	SINE	Alu	AluSq
CAediting_1060124	chr15_74029544_+	SINE	Alu	AluSq
CAediting_1060125	chr15_74029545_+	SINE	Alu	AluSq
CAediting_1060126	chr15_74029552_+	SINE	Alu	AluSq
CAediting_1060127	chr15_74029556_+	SINE	Alu	AluSq
CAediting_1060128	chr15_74029573_+	SINE	Alu	AluSq
CAediting_1060129	chr15_74029579_+	SINE	Alu	AluSq
CAediting_1060130	chr15_74029637_+	SINE	Alu	AluSq
CAediting_1060131	chr15_74029641_+	SINE	Alu	AluSq
CAediting_1060132	chr15_74030529_+	SINE	Alu	AluSx
CAediting_1060133	chr15_74030542_+	SINE	Alu	AluSx
CAediting_1060134	chr15_74030550_+	SINE	Alu	AluSx
CAediting_1060135	chr15_74030570_+	SINE	Alu	AluSx
CAediting_1060136	chr15_74030603_+	SINE	Alu	AluSx
CAediting_1060137	chr15_74030660_+	SINE	Alu	AluSx
CAediting_1060138	chr15_74030661_+	SINE	Alu	AluSx
CAediting_1060139	chr15_74031330_+	SINE	Alu	AluSz6
CAediting_1060140	chr15_74031334_+	SINE	Alu	AluSz6
CAediting_1060141	chr15_74031338_+	SINE	Alu	AluSz6
CAediting_1060142	chr15_74031339_+	SINE	Alu	AluSz6
CAediting_1060143	chr15_74031373_+	SINE	Alu	AluSz6
CAediting_1060144	chr15_74031374_+	SINE	Alu	AluSz6
CAediting_1060145	chr15_74031399_+	SINE	Alu	AluSz6
CAediting_1060146	chr15_74031403_+	SINE	Alu	AluSz6
CAediting_1060147	chr15_74031413_+	SINE	Alu	AluSz6
CAediting_1060148	chr15_74032277_+	SINE	Alu	AluJo
CAediting_1060149	chr15_74032293_+	SINE	Alu	AluJo
CAediting_1060150	chr15_74032300_+	SINE	Alu	AluJo
CAediting_1060151	chr15_74032301_+	SINE	Alu	AluJo

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RNA A-to-I editing events in the alternative splicing sites for PML

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_1060016	chr15_74026190_+	74026171:74026193	3SS	0+1i	GTTTGTTTGTTTGTTTTTTAGAT	-5.82	GTTTGTTTGTTTGTTTTTTGGAT	2.93

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000140464.18.PML.

Correlation between RNA A-to-I editing and PSI for ENSG00000140464.18.PML.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PML

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

SKCM.CAediting_1060078.ENSG00000140464.PML.png
Soverview

SKCM.CAediting_1060100.ENSG00000140464.PML.png
Soverview

STAD.CAediting_1060095.ENSG00000140464.PML.png
Soverview

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Protein coding region RNA A-to-I editings for PML

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PML

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000140464.18	ENST00000565898	hsa-miR-605-3p	74045750	74045757	8mer-1a	74045736	74045757	148	-13.98
CAediting_393	chr1_1167164_+	ENSG00000140464.18	ENST00000565898	hsa-miR-200b-3p	74045083	74045089	7mer-m8	74045071	74045090	143	-11.11
CAediting_846604	chr11_93733708_-	ENSG00000140464.18	ENST00000569477	hsa-miR-1304-3p	74035377	74035383	7mer-m8	74035362	74035384	159	-21.03
CAediting_748296	chr10_51299626_+	ENSG00000140464.18	ENST00000436891	hsa-miR-605-3p	74035710	74035716	7mer-m8	74035697	74035717	145	-14.48
CAediting_846604	chr11_93733708_-	ENSG00000140464.18	ENST00000436891	hsa-miR-1304-3p	74035377	74035383	7mer-m8	74035362	74035384	159	-21.03
CAediting_980496	chr14_31014685_-	ENSG00000140464.18	ENST00000436891	hsa-miR-624-3p	74035887	74035893	7mer-m8	74035874	74035894	153	-19.47
CAediting_748296	chr10_51299626_+	ENSG00000140464.18	ENST00000435786	hsa-miR-605-3p	74035710	74035716	7mer-m8	74035697	74035717	145	-14.48
CAediting_846604	chr11_93733708_-	ENSG00000140464.18	ENST00000435786	hsa-miR-1304-3p	74035377	74035383	7mer-m8	74035362	74035384	159	-21.03
CAediting_980496	chr14_31014685_-	ENSG00000140464.18	ENST00000435786	hsa-miR-624-3p	74035887	74035893	7mer-m8	74035874	74035894	153	-19.47
CAediting_748296	chr10_51299626_+	ENSG00000140464.18	ENST00000563500	hsa-miR-605-3p	74035710	74035716	7mer-m8	74035697	74035717	145	-14.48
CAediting_846604	chr11_93733708_-	ENSG00000140464.18	ENST00000563500	hsa-miR-1304-3p	74035377	74035383	7mer-m8	74035362	74035384	159	-21.03
CAediting_980496	chr14_31014685_-	ENSG00000140464.18	ENST00000563500	hsa-miR-624-3p	74035887	74035893	7mer-m8	74035874	74035894	153	-19.47
CAediting_748296	chr10_51299626_+	ENSG00000140464.18	ENST00000567606	hsa-miR-605-3p	74035710	74035716	7mer-m8	74035697	74035717	145	-14.48
CAediting_846604	chr11_93733708_-	ENSG00000140464.18	ENST00000567606	hsa-miR-1304-3p	74035377	74035383	7mer-m8	74035362	74035384	159	-21.03
CAediting_980496	chr14_31014685_-	ENSG00000140464.18	ENST00000567606	hsa-miR-624-3p	74035887	74035893	7mer-m8	74035874	74035894	153	-19.47
CAediting_748296	chr10_51299626_+	ENSG00000140464.18	ENST00000562086	hsa-miR-605-3p	74035710	74035716	7mer-m8	74035697	74035717	145	-14.48
CAediting_846604	chr11_93733708_-	ENSG00000140464.18	ENST00000562086	hsa-miR-1304-3p	74035377	74035383	7mer-m8	74035362	74035384	159	-21.03
CAediting_980496	chr14_31014685_-	ENSG00000140464.18	ENST00000562086	hsa-miR-624-3p	74035887	74035893	7mer-m8	74035874	74035894	153	-19.47
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000565898	hsa-miR-4512	74046480	74046485	6mer	74046465	74046486	142	-18.35
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000565898	hsa-miR-4512	74045068	74045075	8mer-1a	74045054	74045075	144	-21.99
CAediting_1229414	chr17_67471546_+	ENSG00000140464.18	ENST00000565898	hsa-miR-548aa	74045315	74045321	7mer-m8	74045298	74045322	149	-14.94
CAediting_77128	chr1_85133844_+	ENSG00000140464.18	ENST00000565898	hsa-miR-4423-3p	74045777	74045783	7mer-m8	74045764	74045784	140	-13.68
CAediting_442554	chr5_154685830_+	ENSG00000140464.18	ENST00000565898	hsa-miR-1303	74047024	74047031	8mer-1a	74047010	74047031	143	-16.03
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000569965	hsa-miR-4512	74043041	74043048	8mer-1a	74043022	74043048	148	-22.88
CAediting_396018	chr5_1062918_-	ENSG00000140464.18	ENST00000569965	hsa-miR-4635	74043119	74043126	8mer-1a	74043106	74043126	161	-23.57
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000436891	hsa-miR-4512	74035903	74035909	7mer-m8	74035889	74035910	151	-20.76
CAediting_442554	chr5_154685830_+	ENSG00000140464.18	ENST00000436891	hsa-miR-1303	74035867	74035873	7mer-m8	74035854	74035874	148	-15.41
CAediting_414656	chr5_72878640_+	ENSG00000140464.18	ENST00000436891	hsa-miR-4804-3p	74035934	74035941	8mer-1a	74035921	74035941	143	-18.23
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000435786	hsa-miR-4512	74035903	74035909	7mer-m8	74035889	74035910	151	-20.76
CAediting_442554	chr5_154685830_+	ENSG00000140464.18	ENST00000435786	hsa-miR-1303	74035867	74035873	7mer-m8	74035854	74035874	148	-15.41
CAediting_442554	chr5_154685830_+	ENSG00000140464.18	ENST00000435786	hsa-miR-1303	74034679	74034686	8mer-1a	74034667	74034686	150	-20.73
CAediting_414656	chr5_72878640_+	ENSG00000140464.18	ENST00000435786	hsa-miR-4804-3p	74035934	74035941	8mer-1a	74035921	74035941	143	-18.23
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000359928	hsa-miR-4512	74043041	74043048	8mer-1a	74043022	74043048	148	-22.88
CAediting_396018	chr5_1062918_-	ENSG00000140464.18	ENST00000359928	hsa-miR-4635	74043119	74043126	8mer-1a	74043106	74043126	161	-23.57
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000563500	hsa-miR-4512	74035903	74035909	7mer-m8	74035889	74035910	151	-20.76
CAediting_1368054	chr19_46709310_-	ENSG00000140464.18	ENST00000563500	hsa-miR-320e	74034115	74034122	8mer-1a	74034105	74034122	152	-17.95
CAediting_442554	chr5_154685830_+	ENSG00000140464.18	ENST00000563500	hsa-miR-1303	74034679	74034686	8mer-1a	74034667	74034686	150	-20.73
CAediting_442554	chr5_154685830_+	ENSG00000140464.18	ENST00000563500	hsa-miR-1303	74035867	74035873	7mer-m8	74035854	74035874	148	-15.41
CAediting_414656	chr5_72878640_+	ENSG00000140464.18	ENST00000563500	hsa-miR-4804-3p	74035934	74035941	8mer-1a	74035921	74035941	143	-18.23
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000567606	hsa-miR-4512	74035903	74035909	7mer-m8	74035889	74035910	151	-20.76
CAediting_442554	chr5_154685830_+	ENSG00000140464.18	ENST00000567606	hsa-miR-1303	74035867	74035873	7mer-m8	74035854	74035874	148	-15.41
CAediting_414656	chr5_72878640_+	ENSG00000140464.18	ENST00000567606	hsa-miR-4804-3p	74035934	74035941	8mer-1a	74035921	74035941	143	-18.23
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000562086	hsa-miR-4512	74035903	74035909	7mer-m8	74035889	74035910	151	-20.76
CAediting_442554	chr5_154685830_+	ENSG00000140464.18	ENST00000562086	hsa-miR-1303	74035867	74035873	7mer-m8	74035854	74035874	148	-15.41
CAediting_442554	chr5_154685830_+	ENSG00000140464.18	ENST00000562086	hsa-miR-1303	74034679	74034686	8mer-1a	74034667	74034686	150	-20.73
CAediting_414656	chr5_72878640_+	ENSG00000140464.18	ENST00000562086	hsa-miR-4804-3p	74035934	74035941	8mer-1a	74035921	74035941	143	-18.23
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000268059	hsa-miR-6891-5p	74036009	74036015	7mer-m8	74035998	74036016	157	-26.8
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000354026	hsa-miR-6891-5p	74036009	74036015	7mer-m8	74035998	74036016	157	-26.8
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000436891	hsa-miR-6891-5p	74035722	74035727	6mer	74035711	74035728	143	-28.12
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000436891	hsa-miR-6891-5p	74036009	74036015	7mer-m8	74035998	74036016	157	-26.8
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000435786	hsa-miR-6891-5p	74035722	74035727	6mer	74035711	74035728	143	-28.12
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000435786	hsa-miR-6891-5p	74036009	74036015	7mer-m8	74035998	74036016	157	-26.8
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000563500	hsa-miR-6891-5p	74035722	74035727	6mer	74035711	74035728	143	-28.12
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000563500	hsa-miR-6891-5p	74036009	74036015	7mer-m8	74035998	74036016	157	-26.8
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000567606	hsa-miR-6891-5p	74035722	74035727	6mer	74035711	74035728	143	-28.12
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000567606	hsa-miR-6891-5p	74036009	74036015	7mer-m8	74035998	74036016	157	-26.8
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000562086	hsa-miR-6891-5p	74035722	74035727	6mer	74035711	74035728	143	-28.12
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000562086	hsa-miR-6891-5p	74036009	74036015	7mer-m8	74035998	74036016	157	-26.8

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000268059	hsa-miR-4512	74036032	74036038	7mer-m8	74036016	74036039	143	-18.99
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000354026	hsa-miR-4512	74036032	74036038	7mer-m8	74036016	74036039	143	-18.99
CAediting_1368054	chr19_46709310_-	ENSG00000140464.18	ENST00000565898	hsa-miR-320e	74045022	74045027	6mer	74045011	74045028	140	-10.9
CAediting_1524209	chrX_134546392_-	ENSG00000140464.18	ENST00000565898	hsa-miR-503-5p	74045964	74045970	7mer-m8	74045949	74045971	145	-18.72
CAediting_524911	chr7_5495852_-	ENSG00000140464.18	ENST00000565898	hsa-miR-589-3p	74046717	74046723	7mer-m8	74046701	74046724	144	-13.74
CAediting_1399425	chr20_1392958_-	ENSG00000140464.18	ENST00000565898	hsa-miR-6869-5p	74046354	74046360	7mer-m8	74046340	74046361	150	-17.28
CAediting_468389	chr6_31355314_-	ENSG00000140464.18	ENST00000565898	hsa-miR-6891-5p	74045242	74045248	7mer-m8	74045230	74045249	154	-24.7
CAediting_604450	chr7_133034877_-	ENSG00000140464.18	ENST00000569965	hsa-miR-3654	74043020	74043026	7mer-m8	74043009	74043027	150	-19.48
CAediting_604450	chr7_133034877_-	ENSG00000140464.18	ENST00000436891	hsa-miR-3654	74035258	74035264	7mer-m8	74035248	74035265	155	-25.63
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000436891	hsa-miR-4512	74036032	74036038	7mer-m8	74036016	74036039	143	-18.99
CAediting_846604	chr11_93733708_-	ENSG00000140464.18	ENST00000435786	hsa-miR-1304-3p	74034847	74034853	7mer-m8	74034833	74034854	146	-14.37
CAediting_604450	chr7_133034877_-	ENSG00000140464.18	ENST00000435786	hsa-miR-3654	74035258	74035264	7mer-m8	74035248	74035265	155	-25.63
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000435786	hsa-miR-4512	74036032	74036038	7mer-m8	74036016	74036039	143	-18.99
CAediting_1351755	chr19_40282625_-	ENSG00000140464.18	ENST00000435786	hsa-miR-641	74035747	74035753	7mer-m8	74035726	74035754	146	-13.19
CAediting_604450	chr7_133034877_-	ENSG00000140464.18	ENST00000359928	hsa-miR-3654	74043020	74043026	7mer-m8	74043009	74043027	150	-19.48
CAediting_846604	chr11_93733708_-	ENSG00000140464.18	ENST00000563500	hsa-miR-1304-3p	74034642	74034648	7mer-m8	74034628	74034649	143	-19.03
CAediting_846604	chr11_93733708_-	ENSG00000140464.18	ENST00000563500	hsa-miR-1304-3p	74034847	74034853	7mer-m8	74034833	74034854	146	-14.37
CAediting_1368054	chr19_46709310_-	ENSG00000140464.18	ENST00000563500	hsa-miR-320e	74035318	74035324	7mer-m8	74035308	74035325	146	-14.12
CAediting_1368054	chr19_46709310_-	ENSG00000140464.18	ENST00000563500	hsa-miR-320e	74035737	74035743	7mer-m8	74035727	74035744	145	-14.89
CAediting_604450	chr7_133034877_-	ENSG00000140464.18	ENST00000563500	hsa-miR-3654	74035258	74035264	7mer-m8	74035248	74035265	155	-25.63
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000563500	hsa-miR-4512	74036032	74036038	7mer-m8	74036016	74036039	143	-18.99
CAediting_1351755	chr19_40282625_-	ENSG00000140464.18	ENST00000563500	hsa-miR-641	74035747	74035753	7mer-m8	74035726	74035754	146	-13.19
CAediting_604450	chr7_133034877_-	ENSG00000140464.18	ENST00000567606	hsa-miR-3654	74035258	74035264	7mer-m8	74035248	74035265	155	-25.63
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000567606	hsa-miR-4512	74036032	74036038	7mer-m8	74036016	74036039	143	-18.99
CAediting_604450	chr7_133034877_-	ENSG00000140464.18	ENST00000566068	hsa-miR-3654	74035258	74035264	7mer-m8	74035248	74035265	155	-25.63
CAediting_846604	chr11_93733708_-	ENSG00000140464.18	ENST00000562086	hsa-miR-1304-3p	74034642	74034648	7mer-m8	74034628	74034649	143	-19.03
CAediting_846604	chr11_93733708_-	ENSG00000140464.18	ENST00000562086	hsa-miR-1304-3p	74034847	74034853	7mer-m8	74034833	74034854	146	-14.37
CAediting_604450	chr7_133034877_-	ENSG00000140464.18	ENST00000562086	hsa-miR-3654	74035258	74035264	7mer-m8	74035248	74035265	155	-25.63
CAediting_1054808	chr15_66496985_-	ENSG00000140464.18	ENST00000562086	hsa-miR-4512	74036032	74036038	7mer-m8	74036016	74036039	143	-18.99
CAediting_1351755	chr19_40282625_-	ENSG00000140464.18	ENST00000562086	hsa-miR-641	74035747	74035753	7mer-m8	74035726	74035754	146	-13.19

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PML

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for PML

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LUSC	CAediting_1060057	chr15_74026832_+	0.00612102997183109	0.361964419201662	.	.	.	.
ESCA	CAediting_1060057	chr15_74026832_+	.	.	.	.	0.0378295202927691	0.256234903254163
BRCA	CAediting_1060078	chr15_74027327_+	0.0361612471554721	0.207738239818648	.	.	.	.
LUSC	CAediting_1060078	chr15_74027327_+	0.012836334474397	0.26888266272669	.	.	.	.
HNSC	CAediting_1060078	chr15_74027327_+	0.00107417404234735	0.289139195895611	.	.	.	.
SKCM	CAediting_1060078	chr15_74027327_+	0.000320320197724938	0.404389817249728	.	.	.	.
HNSC	CAediting_1060087	chr15_74027393_+	0.00396178532286804	0.36369835409058	.	.	.	.
ESCA	CAediting_1060100	chr15_74027453_+	0.0381440961251952	0.217736206284283	.	.	.	.
SKCM	CAediting_1060100	chr15_74027453_+	0.0086307377967576	0.357282884011496	0.0496013045654185	0.271082506146075	.	.
BRCA	CAediting_1060109	chr15_74027510_+	.	.	.	.	0.00498421960186157	0.321008741397177

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Relation with cancer stages for PML

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	pathologic_stage	CAediting_1060104	chr15_74027472_+	0.0186442339035677	0.257757292103576
HNSC	clinical_stage	CAediting_1060109	chr15_74027510_+	0.0177923744686634	0.264391665115587
HNSC	pathologic_stage	CAediting_1060095	chr15_74027423_+	0.0422566511751467	0.240042971995436
HNSC	pathologic_stage	CAediting_1060104	chr15_74027472_+	0.0475806992471855	-0.188481832058707
HNSC	pathologic_stage	CAediting_1060109	chr15_74027510_+	0.00280173873982596	0.359596020501011
KIRC	pathologic_stage	CAediting_1060078	chr15_74027327_+	0.0356086915273057	-0.297928297000721
SKCM	pathologic_stage	CAediting_1060078	chr15_74027327_+	0.00474239490016529	-0.354155806715428

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Relation with survival for PML

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for PML

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
PML	P29590	DB01169	Arsenic trioxide	Protein PML	SmallMoleculeDrug	approved\|investigational

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RelatedDiseases for PML

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
PML	C0023487	Acute Promyelocytic Leukemia	21	CTD_human;ORPHANET
PML	C0014518	Toxic Epidermal Necrolysis	1	CTD_human
PML	C0017636	Glioblastoma	1	CTD_human
PML	C0019207	Hepatoma, Morris	1	CTD_human
PML	C0019208	Hepatoma, Novikoff	1	CTD_human
PML	C0023904	Liver Neoplasms, Experimental	1	CTD_human
PML	C0027627	Neoplasm Metastasis	1	CTD_human
PML	C0029401	Osteitis Deformans	1	CTD_human
PML	C0033578	Prostatic Neoplasms	1	CTD_human
PML	C0036341	Schizophrenia	1	CTD_human
PML	C0038325	Stevens-Johnson Syndrome	1	CTD_human
PML	C0085183	Neoplasms, Second Primary	1	CTD_human
PML	C0086404	Experimental Hepatoma	1	CTD_human
PML	C0086696	Neoplasms, Therapy-Associated	1	CTD_human
PML	C0334588	Giant Cell Glioblastoma	1	CTD_human
PML	C0376358	Malignant neoplasm of prostate	1	CTD_human
PML	C0877578	Treatment related secondary malignancy	1	CTD_human
PML	C1274933	Drug-Induced Stevens Johnson Syndrome	1	CTD_human
PML	C1621958	Glioblastoma Multiforme	1	CTD_human
PML	C3658301	Mycoplasma-Induced Stevens-Johnson Syndrome	1	CTD_human
PML	C3658302	Stevens-Johnson Syndrome Toxic Epidermal Necrolysis Spectrum	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene