Home

Download

Statistics

Examples

Help

Contact

Editing gene: NUP54 (CAeditome ID:53371)

Gene summary for NUP54

Gene summary

Gene information	Gene symbol	NUP54
	Gene ID	53371
	Gene name	nucleoporin 54
	Synonyms	-
	Cytomap	4q21.1
	Type of gene	protein-coding
	Description	nucleoporin p5454 kDa nucleoporinnucleoporin 54kDnucleoporin 54kDa
	Modification date	20210518
	UniProtAcc	Q7Z3B4
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

Top

RNA A-to-I events for NUP54

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000138750.13

RNA A-to-I editing events in Cancer.

CAediting_369898(76118416, -), CAediting_369899(76118505, -), CAediting_369900(76118509, -), CAediting_369901(76118525, -), CAediting_369902(76118541, -), CAediting_369903(76118610, -), CAediting_369904(76118660, -), CAediting_369905(76118668, -), CAediting_369906(76118669, -), CAediting_369907(76118677, -), CAediting_369908(76118748, -), CAediting_369909(76118760, -), CAediting_369910(76118762, -), CAediting_369911(76118840, -), CAediting_369912(76118856, -), CAediting_369913(76118866, -), CAediting_369914(76118881, -), CAediting_369915(76118883, -), CAediting_369916(76118893, -), CAediting_369917(76118896, -), CAediting_369918(76118905, -), CAediting_369919(76118959, -), CAediting_369920(76119004, -), CAediting_369921(76119410, -), CAediting_369922(76119482, -), CAediting_369923(76119499, -), CAediting_369924(76119504, -), CAediting_369925(76119505, -), CAediting_369926(76119527, -), CAediting_369927(76119543, -), CAediting_369928(76119566, -), CAediting_369929(76119581, -), CAediting_369930(76119582, -), CAediting_369931(76119621, -), CAediting_369932(76119622, -), CAediting_369933(76119624, -), CAediting_369934(76119636, -), CAediting_369935(76119637, -), CAediting_369936(76119645, -), CAediting_369937(76119650, -), CAediting_369938(76119651, -), CAediting_369939(76120492, -), CAediting_369940(76120498, -), CAediting_369941(76120540, -), CAediting_369942(76120566, -), CAediting_369943(76120567, -), CAediting_369944(76120577, -), CAediting_369945(76120647, -), CAediting_369946(76120648, -), CAediting_369947(76120661, -), CAediting_369948(76120699, -), CAediting_369949(76121605, -), CAediting_369950(76122520, -), CAediting_369951(76123555, -), CAediting_369952(76123575, -), CAediting_369953(76123580, -), CAediting_369954(76123651, -), CAediting_369955(76123673, -), CAediting_369956(76123702, -), CAediting_369957(76123717, -), CAediting_369958(76123786, -), CAediting_369959(76125441, -), CAediting_369960(76129743, -), CAediting_369961(76129796, -), CAediting_369962(76130033, -), CAediting_369963(76130047, -), CAediting_369964(76130066, -), CAediting_369965(76130077, -), CAediting_369966(76130078, -), CAediting_369967(76130086, -), CAediting_369968(76130102, -), CAediting_369969(76130110, -), CAediting_369970(76130113, -), CAediting_369971(76130118, -), CAediting_369972(76130119, -), CAediting_369973(76130145, -), CAediting_369974(76130148, -), CAediting_369975(76130150, -), CAediting_369976(76130151, -), CAediting_369977(76130156, -), CAediting_369978(76130157, -), CAediting_369979(76130158, -), CAediting_369980(76130159, -), CAediting_369981(76130160, -), CAediting_369982(76130161, -), CAediting_369983(76130164, -), CAediting_369984(76130175, -), CAediting_369985(76130176, -), CAediting_369986(76130177, -), CAediting_369987(76130178, -), CAediting_369988(76130195, -), CAediting_369989(76130196, -), CAediting_369990(76130200, -), CAediting_369991(76130201, -), CAediting_369992(76130209, -), CAediting_369993(76130212, -), CAediting_369994(76130233, -), CAediting_369995(76132947, -), CAediting_369996(76133512, -), CAediting_369997(76133598, -), CAediting_369998(76140407, -), CAediting_369999(76140437, -),

Top

RNA editing positional annotations for NUP54 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_369898	chr4_76118416_-	ncRNA_exonic
CAediting_369899	chr4_76118505_-	ncRNA_intronic
CAediting_369900	chr4_76118509_-	ncRNA_intronic
CAediting_369901	chr4_76118525_-	ncRNA_intronic
CAediting_369902	chr4_76118541_-	ncRNA_intronic
CAediting_369903	chr4_76118610_-	ncRNA_intronic
CAediting_369904	chr4_76118660_-	ncRNA_intronic
CAediting_369905	chr4_76118668_-	ncRNA_intronic
CAediting_369906	chr4_76118669_-	ncRNA_intronic
CAediting_369907	chr4_76118677_-	ncRNA_intronic
CAediting_369908	chr4_76118748_-	ncRNA_intronic
CAediting_369909	chr4_76118760_-	ncRNA_intronic
CAediting_369910	chr4_76118762_-	ncRNA_intronic
CAediting_369911	chr4_76118840_-	ncRNA_intronic
CAediting_369912	chr4_76118856_-	ncRNA_intronic
CAediting_369913	chr4_76118866_-	ncRNA_intronic
CAediting_369914	chr4_76118881_-	ncRNA_intronic
CAediting_369915	chr4_76118883_-	ncRNA_intronic
CAediting_369916	chr4_76118893_-	ncRNA_intronic
CAediting_369917	chr4_76118896_-	ncRNA_intronic
CAediting_369918	chr4_76118905_-	ncRNA_intronic
CAediting_369919	chr4_76118959_-	ncRNA_intronic
CAediting_369920	chr4_76119004_-	ncRNA_intronic
CAediting_369921	chr4_76119410_-	ncRNA_intronic
CAediting_369922	chr4_76119482_-	ncRNA_intronic
CAediting_369923	chr4_76119499_-	ncRNA_intronic
CAediting_369924	chr4_76119504_-	ncRNA_intronic
CAediting_369925	chr4_76119505_-	ncRNA_intronic
CAediting_369926	chr4_76119527_-	ncRNA_intronic
CAediting_369927	chr4_76119543_-	ncRNA_intronic
CAediting_369928	chr4_76119566_-	ncRNA_intronic
CAediting_369929	chr4_76119581_-	ncRNA_intronic
CAediting_369930	chr4_76119582_-	ncRNA_intronic
CAediting_369931	chr4_76119621_-	ncRNA_intronic
CAediting_369932	chr4_76119622_-	ncRNA_intronic
CAediting_369933	chr4_76119624_-	ncRNA_intronic
CAediting_369934	chr4_76119636_-	ncRNA_intronic
CAediting_369935	chr4_76119637_-	ncRNA_intronic
CAediting_369936	chr4_76119645_-	ncRNA_intronic
CAediting_369937	chr4_76119650_-	ncRNA_intronic
CAediting_369938	chr4_76119651_-	ncRNA_intronic
CAediting_369939	chr4_76120492_-	ncRNA_intronic
CAediting_369940	chr4_76120498_-	ncRNA_intronic
CAediting_369941	chr4_76120540_-	ncRNA_intronic
CAediting_369942	chr4_76120566_-	ncRNA_intronic
CAediting_369943	chr4_76120567_-	ncRNA_intronic
CAediting_369944	chr4_76120577_-	ncRNA_intronic
CAediting_369945	chr4_76120647_-	ncRNA_intronic
CAediting_369946	chr4_76120648_-	ncRNA_intronic
CAediting_369947	chr4_76120661_-	ncRNA_intronic
CAediting_369948	chr4_76120699_-	ncRNA_intronic
CAediting_369949	chr4_76121605_-	ncRNA_intronic
CAediting_369950	chr4_76122520_-	ncRNA_intronic
CAediting_369951	chr4_76123555_-	ncRNA_intronic
CAediting_369952	chr4_76123575_-	ncRNA_intronic
CAediting_369953	chr4_76123580_-	ncRNA_intronic
CAediting_369954	chr4_76123651_-	ncRNA_intronic
CAediting_369955	chr4_76123673_-	ncRNA_intronic
CAediting_369956	chr4_76123702_-	ncRNA_intronic
CAediting_369957	chr4_76123717_-	ncRNA_intronic
CAediting_369958	chr4_76123786_-	ncRNA_intronic
CAediting_369959	chr4_76125441_-	ncRNA_intronic
CAediting_369960	chr4_76129743_-	ncRNA_intronic
CAediting_369961	chr4_76129796_-	ncRNA_intronic
CAediting_369962	chr4_76130033_-	ncRNA_intronic
CAediting_369963	chr4_76130047_-	ncRNA_intronic
CAediting_369964	chr4_76130066_-	ncRNA_intronic
CAediting_369965	chr4_76130077_-	ncRNA_intronic
CAediting_369966	chr4_76130078_-	ncRNA_intronic
CAediting_369967	chr4_76130086_-	ncRNA_intronic
CAediting_369968	chr4_76130102_-	ncRNA_intronic
CAediting_369969	chr4_76130110_-	ncRNA_intronic
CAediting_369970	chr4_76130113_-	ncRNA_intronic
CAediting_369971	chr4_76130118_-	ncRNA_intronic
CAediting_369972	chr4_76130119_-	ncRNA_intronic
CAediting_369973	chr4_76130145_-	ncRNA_intronic
CAediting_369974	chr4_76130148_-	ncRNA_intronic
CAediting_369975	chr4_76130150_-	ncRNA_intronic
CAediting_369976	chr4_76130151_-	ncRNA_intronic
CAediting_369977	chr4_76130156_-	ncRNA_intronic
CAediting_369978	chr4_76130157_-	ncRNA_intronic
CAediting_369979	chr4_76130158_-	ncRNA_intronic
CAediting_369980	chr4_76130159_-	ncRNA_intronic
CAediting_369981	chr4_76130160_-	ncRNA_intronic
CAediting_369982	chr4_76130161_-	ncRNA_intronic
CAediting_369983	chr4_76130164_-	ncRNA_intronic
CAediting_369984	chr4_76130175_-	ncRNA_intronic
CAediting_369985	chr4_76130176_-	ncRNA_intronic
CAediting_369986	chr4_76130177_-	ncRNA_intronic
CAediting_369987	chr4_76130178_-	ncRNA_intronic
CAediting_369988	chr4_76130195_-	ncRNA_intronic
CAediting_369989	chr4_76130196_-	ncRNA_intronic
CAediting_369990	chr4_76130200_-	ncRNA_intronic
CAediting_369991	chr4_76130201_-	ncRNA_intronic
CAediting_369992	chr4_76130209_-	ncRNA_intronic
CAediting_369993	chr4_76130212_-	ncRNA_intronic
CAediting_369994	chr4_76130233_-	ncRNA_intronic
CAediting_369995	chr4_76132947_-	ncRNA_intronic
CAediting_369996	chr4_76133512_-	ncRNA_intronic
CAediting_369997	chr4_76133598_-	ncRNA_intronic
CAediting_369998	chr4_76140407_-	ncRNA_intronic
CAediting_369999	chr4_76140437_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_369898	chr4_76118416_-	SINE	Alu	AluJb
CAediting_369899	chr4_76118505_-	SINE	Alu	AluJb
CAediting_369900	chr4_76118509_-	SINE	Alu	AluJb
CAediting_369901	chr4_76118525_-	SINE	Alu	AluJb
CAediting_369902	chr4_76118541_-	SINE	Alu	AluJb
CAediting_369903	chr4_76118610_-	SINE	Alu	AluJb
CAediting_369904	chr4_76118660_-	SINE	Alu	AluJb
CAediting_369905	chr4_76118668_-	SINE	Alu	AluJb
CAediting_369906	chr4_76118669_-	SINE	Alu	AluJb
CAediting_369907	chr4_76118677_-	SINE	Alu	AluJb
CAediting_369908	chr4_76118748_-	SINE	Alu	AluY
CAediting_369909	chr4_76118760_-	SINE	Alu	AluY
CAediting_369910	chr4_76118762_-	SINE	Alu	AluY
CAediting_369911	chr4_76118840_-	SINE	Alu	AluY
CAediting_369912	chr4_76118856_-	SINE	Alu	AluY
CAediting_369913	chr4_76118866_-	SINE	Alu	AluY
CAediting_369914	chr4_76118881_-	SINE	Alu	AluY
CAediting_369915	chr4_76118883_-	SINE	Alu	AluY
CAediting_369916	chr4_76118893_-	SINE	Alu	AluY
CAediting_369917	chr4_76118896_-	SINE	Alu	AluY
CAediting_369918	chr4_76118905_-	SINE	Alu	AluY
CAediting_369919	chr4_76118959_-	SINE	Alu	AluY
CAediting_369920	chr4_76119004_-	SINE	Alu	AluY
CAediting_369921	chr4_76119410_-	SINE	Alu	AluJb
CAediting_369922	chr4_76119482_-	SINE	Alu	AluJb
CAediting_369923	chr4_76119499_-	SINE	Alu	AluJb
CAediting_369924	chr4_76119504_-	SINE	Alu	AluJb
CAediting_369925	chr4_76119505_-	SINE	Alu	AluJb
CAediting_369926	chr4_76119527_-	SINE	Alu	AluJb
CAediting_369927	chr4_76119543_-	SINE	Alu	AluJb
CAediting_369928	chr4_76119566_-	SINE	Alu	AluJb
CAediting_369929	chr4_76119581_-	SINE	Alu	AluJb
CAediting_369930	chr4_76119582_-	SINE	Alu	AluJb
CAediting_369931	chr4_76119621_-	SINE	Alu	AluJb
CAediting_369932	chr4_76119622_-	SINE	Alu	AluJb
CAediting_369933	chr4_76119624_-	SINE	Alu	AluJb
CAediting_369934	chr4_76119636_-	SINE	Alu	AluJb
CAediting_369935	chr4_76119637_-	SINE	Alu	AluJb
CAediting_369936	chr4_76119645_-	SINE	Alu	AluJb
CAediting_369937	chr4_76119650_-	SINE	Alu	AluJb
CAediting_369938	chr4_76119651_-	SINE	Alu	AluJb
CAediting_369939	chr4_76120492_-	SINE	Alu	AluSg7
CAediting_369940	chr4_76120498_-	SINE	Alu	AluSg7
CAediting_369941	chr4_76120540_-	SINE	Alu	AluSg7
CAediting_369942	chr4_76120566_-	SINE	Alu	AluSg7
CAediting_369943	chr4_76120567_-	SINE	Alu	AluSg7
CAediting_369944	chr4_76120577_-	SINE	Alu	AluSg7
CAediting_369945	chr4_76120647_-	SINE	Alu	AluSg7
CAediting_369946	chr4_76120648_-	SINE	Alu	AluSg7
CAediting_369947	chr4_76120661_-	SINE	Alu	AluSg7
CAediting_369948	chr4_76120699_-	SINE	Alu	AluSg7
CAediting_369949	chr4_76121605_-	SINE	Alu	FAM
CAediting_369950	chr4_76122520_-	LINE	L1	L1ME1
CAediting_369951	chr4_76123555_-	SINE	Alu	AluSx
CAediting_369952	chr4_76123575_-	SINE	Alu	AluSx
CAediting_369953	chr4_76123580_-	SINE	Alu	AluSx
CAediting_369954	chr4_76123651_-	SINE	Alu	AluSx
CAediting_369955	chr4_76123673_-	SINE	Alu	AluSx
CAediting_369956	chr4_76123702_-	SINE	Alu	AluSx
CAediting_369957	chr4_76123717_-	SINE	Alu	AluSx
CAediting_369958	chr4_76123786_-	SINE	Alu	AluSx
CAediting_369959	chr4_76125441_-	SINE	Alu	AluJr
CAediting_369960	chr4_76129743_-	SINE	Alu	AluY
CAediting_369961	chr4_76129796_-	SINE	Alu	AluY
CAediting_369962	chr4_76130033_-	SINE	Alu	AluSz6
CAediting_369963	chr4_76130047_-	SINE	Alu	AluSz6
CAediting_369964	chr4_76130066_-	SINE	Alu	AluSz6
CAediting_369965	chr4_76130077_-	SINE	Alu	AluSz6
CAediting_369966	chr4_76130078_-	SINE	Alu	AluSz6
CAediting_369967	chr4_76130086_-	SINE	Alu	AluSz6
CAediting_369968	chr4_76130102_-	SINE	Alu	AluSz6
CAediting_369969	chr4_76130110_-	SINE	Alu	AluSz6
CAediting_369970	chr4_76130113_-	SINE	Alu	AluSz6
CAediting_369971	chr4_76130118_-	SINE	Alu	AluSz6
CAediting_369972	chr4_76130119_-	SINE	Alu	AluSz6
CAediting_369973	chr4_76130145_-	SINE	Alu	AluSz6
CAediting_369974	chr4_76130148_-	SINE	Alu	AluSz6
CAediting_369975	chr4_76130150_-	SINE	Alu	AluSz6
CAediting_369976	chr4_76130151_-	SINE	Alu	AluSz6
CAediting_369977	chr4_76130156_-	SINE	Alu	AluSz6
CAediting_369978	chr4_76130157_-	SINE	Alu	AluSz6
CAediting_369979	chr4_76130158_-	SINE	Alu	AluSz6
CAediting_369980	chr4_76130159_-	SINE	Alu	AluSz6
CAediting_369981	chr4_76130160_-	SINE	Alu	AluSz6
CAediting_369982	chr4_76130161_-	SINE	Alu	AluSz6
CAediting_369983	chr4_76130164_-	SINE	Alu	AluSz6
CAediting_369984	chr4_76130175_-	SINE	Alu	AluSz6
CAediting_369985	chr4_76130176_-	SINE	Alu	AluSz6
CAediting_369986	chr4_76130177_-	SINE	Alu	AluSz6
CAediting_369987	chr4_76130178_-	SINE	Alu	AluSz6
CAediting_369988	chr4_76130195_-	SINE	Alu	AluSz6
CAediting_369989	chr4_76130196_-	SINE	Alu	AluSz6
CAediting_369990	chr4_76130200_-	SINE	Alu	AluSz6
CAediting_369991	chr4_76130201_-	SINE	Alu	AluSz6
CAediting_369992	chr4_76130209_-	SINE	Alu	AluSz6
CAediting_369993	chr4_76130212_-	SINE	Alu	AluSz6
CAediting_369994	chr4_76130233_-	SINE	Alu	AluSz6
CAediting_369995	chr4_76132947_-	SINE	Alu	AluJr
CAediting_369996	chr4_76133512_-	SINE	Alu	AluY
CAediting_369997	chr4_76133598_-	SINE	Alu	AluY
CAediting_369998	chr4_76140407_-	SINE	Alu	AluSx
CAediting_369999	chr4_76140437_-	SINE	Alu	AluSx

Top

RNA A-to-I editing events in the alternative splicing sites for NUP54

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000138750.13.NUP54.

Correlation between RNA A-to-I editing and PSI for ENSG00000138750.13.NUP54.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for NUP54

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for NUP54

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for NUP54

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000138750.13	ENST00000507257	hsa-miR-200b-3p	76115078	76115084	7mer-m8	76115077	76115096	157	-15.4
CAediting_393	chr1_1167164_+	ENSG00000138750.13	ENST00000264883	hsa-miR-200b-3p	76115078	76115084	7mer-m8	76115077	76115096	157	-15.4
CAediting_1160181	chr17_7017644_-	ENSG00000138750.13	ENST00000507257	hsa-miR-195-3p	76134186	76134192	7mer-m8	76134185	76134206	145	-17.88
CAediting_1351755	chr19_40282625_-	ENSG00000138750.13	ENST00000507257	hsa-miR-641	76117749	76117756	8mer-1a	76117749	76117774	146	-15.61
CAediting_1351755	chr19_40282625_-	ENSG00000138750.13	ENST00000502850	hsa-miR-641	76117749	76117756	8mer-1a	76117749	76117774	146	-15.61
CAediting_1160181	chr17_7017644_-	ENSG00000138750.13	ENST00000512151	hsa-miR-195-3p	76134186	76134192	7mer-m8	76134185	76134206	145	-17.88
CAediting_1351755	chr19_40282625_-	ENSG00000138750.13	ENST00000512151	hsa-miR-641	76117749	76117756	8mer-1a	76117749	76117774	146	-15.61

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for NUP54

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000513248.1	retained_intron

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_369898	ENST00000513248.1	chr4_76118416_-	-127.50	-126.80	-127.50

Top

Relation with ADAR for NUP54

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for NUP54

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for NUP54

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for NUP54

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for NUP54

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene