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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: PIGH (CAeditome ID:5283) |
Gene summary for PIGH |
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Gene information | Gene symbol | PIGH | Gene ID | 5283 |
Gene name | phosphatidylinositol glycan anchor biosynthesis class H | |
Synonyms | GPI-H | |
Cytomap | 14q24.1 | |
Type of gene | protein-coding | |
Description | phosphatidylinositol N-acetylglucosaminyltransferase subunit Hphosphatidylinositol-glycan biosynthesis, class H protein | |
Modification date | 20210518 | |
UniProtAcc | Q14442 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
PIGH | GO:0006506 | Phosphatidylinositol N-acetylglucosaminyltransferase subunit H | 16162815 |
PIGH | GO:0000506 | Phosphatidylinositol N-acetylglucosaminyltransferase subunit H | 10944123 |
PIGH | GO:0000506 | Phosphatidylinositol N-acetylglucosaminyltransferase subunit H | 16162815 |
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RNA A-to-I events for PIGH |
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CAediting_999171(67590367, -), CAediting_999172(67591580, -), CAediting_999173(67591652, -), CAediting_999174(67591664, -), CAediting_999175(67591691, -), CAediting_999176(67591696, -), CAediting_999177(67591699, -), CAediting_999178(67591734, -), CAediting_999179(67591760, -), CAediting_999180(67591765, -), CAediting_999181(67591770, -), CAediting_999182(67591783, -), CAediting_999183(67591807, -), CAediting_999184(67591808, -), CAediting_999185(67592175, -), CAediting_999186(67592178, -), CAediting_999187(67592200, -), CAediting_999188(67592214, -), CAediting_999189(67592217, -), CAediting_999190(67592223, -), CAediting_999191(67592237, -), CAediting_999192(67592262, -), CAediting_999193(67592269, -), CAediting_999194(67592316, -), CAediting_999195(67592318, -), CAediting_999196(67592328, -), CAediting_999197(67592340, -), CAediting_999198(67592357, -), CAediting_999199(67592358, -), CAediting_999200(67592371, -), CAediting_999201(67592378, -), CAediting_999202(67592390, -), CAediting_999203(67592394, -), CAediting_999204(67592416, -), CAediting_999205(67592424, -), CAediting_999206(67592430, -), CAediting_999207(67592432, -), CAediting_999208(67592787, -), CAediting_999209(67592815, -), CAediting_999210(67592824, -), CAediting_999211(67592853, -), CAediting_999212(67592862, -), CAediting_999213(67592871, -), CAediting_999214(67592882, -), CAediting_999215(67592883, -), CAediting_999216(67592965, -), CAediting_999217(67592966, -), CAediting_999218(67592969, -), CAediting_999219(67592981, -), CAediting_999220(67592988, -), CAediting_999221(67593000, -), CAediting_999222(67593003, -), CAediting_999223(67593005, -), CAediting_999224(67593019, -), CAediting_999225(67593054, -), CAediting_999226(67593060, -), CAediting_999227(67593097, -), CAediting_999228(67593231, -), CAediting_999229(67593233, -), CAediting_999230(67593238, -), CAediting_999231(67593245, -), CAediting_999232(67593246, -), CAediting_999233(67593268, -), CAediting_999234(67593272, -), CAediting_999235(67593273, -), CAediting_999236(67593298, -), CAediting_999237(67593310, -), CAediting_999238(67593324, -), CAediting_999239(67593367, -), CAediting_999240(67593369, -), CAediting_999241(67593379, -), CAediting_999242(67593391, -), CAediting_999243(67593396, -), CAediting_999244(67593408, -), CAediting_999245(67593434, -), CAediting_999246(67593439, -), CAediting_999247(67594464, -), CAediting_999248(67594615, -), CAediting_999249(67596191, -), CAediting_999250(67596194, -), CAediting_999251(67596231, -), CAediting_999252(67596340, -), CAediting_999253(67596350, -), CAediting_999254(67596354, -), CAediting_999255(67596420, -), CAediting_999256(67597418, -), CAediting_999257(67597464, -), |
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RNA editing positional annotations for PIGH using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_999194 | chr14_67592316_- | nonsynonymous SNV | ENST00000559581.4 | c.A478G | p.R160G | D | . | D |
CAediting_999195 | chr14_67592318_- | nonsynonymous SNV | ENST00000559581.4 | c.A476G | p.Y159C | D | . | D |
CAediting_999196 | chr14_67592328_- | nonsynonymous SNV | ENST00000559581.4 | c.A466G | p.T156A | D | . | N |
CAediting_999199 | chr14_67592358_- | nonsynonymous SNV | ENST00000559581.4 | c.A436G | p.K146E | D | . | D |
CAediting_999201 | chr14_67592378_- | nonsynonymous SNV | ENST00000559581.4 | c.A416G | p.Q139R | D | . | D |
CAediting_999205 | chr14_67592424_- | nonsynonymous SNV | ENST00000559415.1 | c.A391G | p.T131A | D | . | N |
CAediting_999205 | chr14_67592424_- | nonsynonymous SNV | ENST00000559581.4 | c.A370G | p.T124A | D | . | N |
CAediting_999207 | chr14_67592432_- | nonsynonymous SNV | ENST00000559415.1 | c.A383G | p.Q128R | D | . | N |
CAediting_999207 | chr14_67592432_- | nonsynonymous SNV | ENST00000559581.4 | c.A362G | p.Q121R | D | . | N |
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CAeditome ID | Position | Variant type |
CAediting_999171 | chr14_67590367_- | ncRNA_intronic |
CAediting_999172 | chr14_67591580_- | ncRNA_intronic |
CAediting_999173 | chr14_67591652_- | ncRNA_intronic |
CAediting_999174 | chr14_67591664_- | ncRNA_intronic |
CAediting_999175 | chr14_67591691_- | ncRNA_intronic |
CAediting_999176 | chr14_67591696_- | ncRNA_intronic |
CAediting_999177 | chr14_67591699_- | ncRNA_intronic |
CAediting_999178 | chr14_67591734_- | ncRNA_intronic |
CAediting_999179 | chr14_67591760_- | ncRNA_intronic |
CAediting_999180 | chr14_67591765_- | ncRNA_intronic |
CAediting_999181 | chr14_67591770_- | ncRNA_intronic |
CAediting_999182 | chr14_67591783_- | ncRNA_intronic |
CAediting_999183 | chr14_67591807_- | ncRNA_intronic |
CAediting_999184 | chr14_67591808_- | ncRNA_intronic |
CAediting_999185 | chr14_67592175_- | ncRNA_intronic |
CAediting_999186 | chr14_67592178_- | ncRNA_intronic |
CAediting_999187 | chr14_67592200_- | ncRNA_intronic |
CAediting_999188 | chr14_67592214_- | ncRNA_intronic |
CAediting_999189 | chr14_67592217_- | ncRNA_intronic |
CAediting_999190 | chr14_67592223_- | ncRNA_intronic |
CAediting_999191 | chr14_67592237_- | ncRNA_intronic |
CAediting_999192 | chr14_67592262_- | exonic |
CAediting_999193 | chr14_67592269_- | exonic |
CAediting_999194 | chr14_67592316_- | exonic |
CAediting_999195 | chr14_67592318_- | exonic |
CAediting_999196 | chr14_67592328_- | exonic |
CAediting_999197 | chr14_67592340_- | exonic |
CAediting_999198 | chr14_67592357_- | exonic |
CAediting_999199 | chr14_67592358_- | exonic |
CAediting_999200 | chr14_67592371_- | exonic |
CAediting_999201 | chr14_67592378_- | exonic |
CAediting_999202 | chr14_67592390_- | exonic |
CAediting_999203 | chr14_67592394_- | exonic |
CAediting_999204 | chr14_67592416_- | exonic |
CAediting_999205 | chr14_67592424_- | exonic |
CAediting_999206 | chr14_67592430_- | exonic |
CAediting_999207 | chr14_67592432_- | exonic |
CAediting_999208 | chr14_67592787_- | intronic |
CAediting_999209 | chr14_67592815_- | intronic |
CAediting_999210 | chr14_67592824_- | intronic |
CAediting_999211 | chr14_67592853_- | intronic |
CAediting_999212 | chr14_67592862_- | intronic |
CAediting_999213 | chr14_67592871_- | intronic |
CAediting_999214 | chr14_67592882_- | intronic |
CAediting_999215 | chr14_67592883_- | intronic |
CAediting_999216 | chr14_67592965_- | intronic |
CAediting_999217 | chr14_67592966_- | intronic |
CAediting_999218 | chr14_67592969_- | intronic |
CAediting_999219 | chr14_67592981_- | intronic |
CAediting_999220 | chr14_67592988_- | intronic |
CAediting_999221 | chr14_67593000_- | intronic |
CAediting_999222 | chr14_67593003_- | intronic |
CAediting_999223 | chr14_67593005_- | intronic |
CAediting_999224 | chr14_67593019_- | intronic |
CAediting_999225 | chr14_67593054_- | intronic |
CAediting_999226 | chr14_67593060_- | intronic |
CAediting_999227 | chr14_67593097_- | intronic |
CAediting_999228 | chr14_67593231_- | intronic |
CAediting_999229 | chr14_67593233_- | intronic |
CAediting_999230 | chr14_67593238_- | intronic |
CAediting_999231 | chr14_67593245_- | intronic |
CAediting_999232 | chr14_67593246_- | intronic |
CAediting_999233 | chr14_67593268_- | ncRNA_exonic |
CAediting_999234 | chr14_67593272_- | ncRNA_exonic |
CAediting_999235 | chr14_67593273_- | ncRNA_exonic |
CAediting_999236 | chr14_67593298_- | ncRNA_exonic |
CAediting_999237 | chr14_67593310_- | ncRNA_exonic |
CAediting_999238 | chr14_67593324_- | ncRNA_exonic |
CAediting_999239 | chr14_67593367_- | ncRNA_exonic |
CAediting_999240 | chr14_67593369_- | ncRNA_exonic |
CAediting_999241 | chr14_67593379_- | ncRNA_exonic |
CAediting_999242 | chr14_67593391_- | ncRNA_exonic |
CAediting_999243 | chr14_67593396_- | ncRNA_exonic |
CAediting_999244 | chr14_67593408_- | ncRNA_exonic |
CAediting_999245 | chr14_67593434_- | ncRNA_exonic |
CAediting_999246 | chr14_67593439_- | ncRNA_exonic |
CAediting_999247 | chr14_67594464_- | ncRNA_intronic |
CAediting_999248 | chr14_67594615_- | ncRNA_intronic |
CAediting_999249 | chr14_67596191_- | ncRNA_intronic |
CAediting_999250 | chr14_67596194_- | ncRNA_intronic |
CAediting_999251 | chr14_67596231_- | ncRNA_intronic |
CAediting_999252 | chr14_67596340_- | ncRNA_intronic |
CAediting_999253 | chr14_67596350_- | ncRNA_intronic |
CAediting_999254 | chr14_67596354_- | ncRNA_intronic |
CAediting_999255 | chr14_67596420_- | ncRNA_intronic |
CAediting_999256 | chr14_67597418_- | ncRNA_intronic |
CAediting_999257 | chr14_67597464_- | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_999171 | chr14_67590367_- | SINE | Alu | AluSx1 |
CAediting_999172 | chr14_67591580_- | SINE | Alu | AluJb |
CAediting_999173 | chr14_67591652_- | SINE | Alu | AluJb |
CAediting_999174 | chr14_67591664_- | SINE | Alu | AluJb |
CAediting_999175 | chr14_67591691_- | SINE | Alu | AluJb |
CAediting_999176 | chr14_67591696_- | SINE | Alu | AluJb |
CAediting_999177 | chr14_67591699_- | SINE | Alu | AluJb |
CAediting_999178 | chr14_67591734_- | SINE | Alu | AluJb |
CAediting_999179 | chr14_67591760_- | SINE | Alu | AluJb |
CAediting_999180 | chr14_67591765_- | SINE | Alu | AluJb |
CAediting_999181 | chr14_67591770_- | SINE | Alu | AluJb |
CAediting_999182 | chr14_67591783_- | SINE | Alu | AluJb |
CAediting_999183 | chr14_67591807_- | SINE | Alu | AluJb |
CAediting_999184 | chr14_67591808_- | SINE | Alu | AluJb |
CAediting_999185 | chr14_67592175_- | SINE | Alu | AluJb |
CAediting_999186 | chr14_67592178_- | SINE | Alu | AluJb |
CAediting_999187 | chr14_67592200_- | SINE | Alu | AluJb |
CAediting_999188 | chr14_67592214_- | SINE | Alu | AluJb |
CAediting_999189 | chr14_67592217_- | SINE | Alu | AluJb |
CAediting_999190 | chr14_67592223_- | SINE | Alu | AluJb |
CAediting_999191 | chr14_67592237_- | SINE | Alu | AluJb |
CAediting_999192 | chr14_67592262_- | SINE | Alu | AluJb |
CAediting_999193 | chr14_67592269_- | SINE | Alu | AluJb |
CAediting_999194 | chr14_67592316_- | SINE | Alu | AluJb |
CAediting_999195 | chr14_67592318_- | SINE | Alu | AluJb |
CAediting_999196 | chr14_67592328_- | SINE | Alu | AluJb |
CAediting_999197 | chr14_67592340_- | SINE | Alu | AluJb |
CAediting_999198 | chr14_67592357_- | SINE | Alu | AluJb |
CAediting_999199 | chr14_67592358_- | SINE | Alu | AluJb |
CAediting_999200 | chr14_67592371_- | SINE | Alu | AluJb |
CAediting_999201 | chr14_67592378_- | SINE | Alu | AluJb |
CAediting_999202 | chr14_67592390_- | SINE | Alu | AluJb |
CAediting_999203 | chr14_67592394_- | SINE | Alu | AluJb |
CAediting_999204 | chr14_67592416_- | SINE | Alu | AluJb |
CAediting_999205 | chr14_67592424_- | SINE | Alu | AluJb |
CAediting_999206 | chr14_67592430_- | SINE | Alu | AluJb |
CAediting_999207 | chr14_67592432_- | SINE | Alu | AluJb |
CAediting_999208 | chr14_67592787_- | SINE | Alu | AluSx1 |
CAediting_999209 | chr14_67592815_- | SINE | Alu | AluSx1 |
CAediting_999210 | chr14_67592824_- | SINE | Alu | AluSx1 |
CAediting_999211 | chr14_67592853_- | SINE | Alu | AluSx1 |
CAediting_999212 | chr14_67592862_- | SINE | Alu | AluSx1 |
CAediting_999213 | chr14_67592871_- | SINE | Alu | AluSx1 |
CAediting_999214 | chr14_67592882_- | SINE | Alu | AluSx1 |
CAediting_999215 | chr14_67592883_- | SINE | Alu | AluSx1 |
CAediting_999216 | chr14_67592965_- | SINE | Alu | AluSx1 |
CAediting_999217 | chr14_67592966_- | SINE | Alu | AluSx1 |
CAediting_999218 | chr14_67592969_- | SINE | Alu | AluSx1 |
CAediting_999219 | chr14_67592981_- | SINE | Alu | AluSx1 |
CAediting_999220 | chr14_67592988_- | SINE | Alu | AluSx1 |
CAediting_999221 | chr14_67593000_- | SINE | Alu | AluSx1 |
CAediting_999222 | chr14_67593003_- | SINE | Alu | AluSx1 |
CAediting_999223 | chr14_67593005_- | SINE | Alu | AluSx1 |
CAediting_999224 | chr14_67593019_- | SINE | Alu | AluSx1 |
CAediting_999225 | chr14_67593054_- | SINE | Alu | AluSx1 |
CAediting_999226 | chr14_67593060_- | SINE | Alu | AluSx1 |
CAediting_999228 | chr14_67593231_- | SINE | Alu | AluJb |
CAediting_999229 | chr14_67593233_- | SINE | Alu | AluJb |
CAediting_999230 | chr14_67593238_- | SINE | Alu | AluJb |
CAediting_999231 | chr14_67593245_- | SINE | Alu | AluJb |
CAediting_999232 | chr14_67593246_- | SINE | Alu | AluJb |
CAediting_999233 | chr14_67593268_- | SINE | Alu | AluJb |
CAediting_999234 | chr14_67593272_- | SINE | Alu | AluJb |
CAediting_999235 | chr14_67593273_- | SINE | Alu | AluJb |
CAediting_999236 | chr14_67593298_- | SINE | Alu | AluJb |
CAediting_999237 | chr14_67593310_- | SINE | Alu | AluJb |
CAediting_999238 | chr14_67593324_- | SINE | Alu | AluJb |
CAediting_999239 | chr14_67593367_- | SINE | Alu | AluJb |
CAediting_999240 | chr14_67593369_- | SINE | Alu | AluJb |
CAediting_999241 | chr14_67593379_- | SINE | Alu | AluJb |
CAediting_999242 | chr14_67593391_- | SINE | Alu | AluJb |
CAediting_999243 | chr14_67593396_- | SINE | Alu | AluJb |
CAediting_999244 | chr14_67593408_- | SINE | Alu | AluJb |
CAediting_999245 | chr14_67593434_- | SINE | Alu | AluJb |
CAediting_999246 | chr14_67593439_- | SINE | Alu | AluJb |
CAediting_999247 | chr14_67594464_- | SINE | Alu | AluSc |
CAediting_999248 | chr14_67594615_- | SINE | Alu | AluSc |
CAediting_999249 | chr14_67596191_- | SINE | Alu | AluSq2 |
CAediting_999250 | chr14_67596194_- | SINE | Alu | AluSq2 |
CAediting_999251 | chr14_67596231_- | SINE | Alu | AluSq2 |
CAediting_999252 | chr14_67596340_- | SINE | Alu | AluSq2 |
CAediting_999253 | chr14_67596350_- | SINE | Alu | AluSq2 |
CAediting_999254 | chr14_67596354_- | SINE | Alu | AluSq2 |
CAediting_999255 | chr14_67596420_- | SINE | Alu | AluSq2 |
CAediting_999256 | chr14_67597418_- | SINE | Alu | AluJo |
CAediting_999257 | chr14_67597464_- | SINE | Alu | AluJo |
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RNA A-to-I editing events in the alternative splicing sites for PIGH |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
ES | CAediting_999194 | chr14_67592316_- | 67592308:67592316 | 5SS | 3+0i | AGGTGTGCA | -27.62 | GGGTGTGCA | -31.5 |
ES | CAediting_999228 | chr14_67593231_- | 67593223:67593231 | 5SS | 3+0i | AGGTTTGAG | -15.65 | GGGTTTGAG | -19.51 |
IR | CAediting_999228 | chr14_67593231_- | 67593223:67593231 | 5SS | 3+0i | AGGTTTGAG | -15.65 | GGGTTTGAG | -19.51 |
IR | CAediting_999238 | chr14_67593324_- | 67593320:67593342 | 3SS | 0+2i | GTTTTTTCTATGTTTTGCAGAGA | 9.17 | GTTTTTTCTATGTTTTGCGGAGA | 1.21 |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PIGH |
![]() * The grey color means N/A. |
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PRAD.CAediting_999234.ENSG00000100564.PIGH.png ![]() |
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Protein coding region RNA A-to-I editings for PIGH |
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The effects of the RNA editing to the miRNA binding sites for PIGH |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_999185 | chr14_67592175_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-6514-3p | 67592172 | 67592178 | 7mer-m8 | 67592171 | 67592191 | 155.00 | -17.54 |
CAediting_999186 | chr14_67592178_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-4327 | 67592172 | 67592179 | 8mer-1a | 67592172 | 67592190 | 140.00 | -11.95 |
CAediting_999189 | chr14_67592217_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-12113 | 67592217 | 67592223 | 7mer-m8 | 67592216 | 67592240 | 146.00 | -21.75 |
CAediting_999189 | chr14_67592217_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-4539 | 67592217 | 67592223 | 7mer-m8 | 67592216 | 67592235 | 147.00 | -15.09 |
CAediting_999190 | chr14_67592223_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-6840-3p | 67592222 | 67592227 | 6mer | 67592221 | 67592241 | 151.00 | -20.44 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_999190 | chr14_67592223_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-1266-5p | 67592222 | 67592227 | 6mer | 67592221 | 67592241 | 142 | -17.94 |
CAediting_999188 | chr14_67592214_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-219b-3p | 67592210 | 67592216 | 7mer-m8 | 67592209 | 67592227 | 155 | -18.52 |
CAediting_999188 | chr14_67592214_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-302f | 67592211 | 67592217 | 7mer-m8 | 67592210 | 67592226 | 145 | -6.24 |
CAediting_999187 | chr14_67592200_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-4478 | 67592196 | 67592202 | 7mer-m8 | 67592195 | 67592210 | 149 | -25.05 |
CAediting_999187 | chr14_67592200_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-4649-3p | 67592199 | 67592205 | 7mer-m8 | 67592198 | 67592218 | 140 | -14.11 |
CAediting_999190 | chr14_67592223_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-510-5p | 67592221 | 67592227 | 7mer-m8 | 67592220 | 67592241 | 150 | -19.76 |
CAediting_999187 | chr14_67592200_- | ENSG00000100564.7 | ENST00000559581 | hsa-miR-7160-5p | 67592198 | 67592204 | 7mer-m8 | 67592197 | 67592217 | 147 | -20.02 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1306324 | chr19_13836464_- | ENSG00000100564.7 | ENST00000561272 | hsa-miR-27a-3p | 67582077 | 67582084 | 8mer-1a | 67582077 | 67582094 | 145 | -16.11 |
CAediting_393 | chr1_1167164_+ | ENSG00000100564.7 | ENST00000558987 | hsa-miR-200b-3p | 67590054 | 67590060 | 7mer-m8 | 67590053 | 67590076 | 154 | -18.79 |
CAediting_393 | chr1_1167164_+ | ENSG00000100564.7 | ENST00000560722 | hsa-miR-200b-3p | 67590054 | 67590060 | 7mer-m8 | 67590053 | 67590076 | 154 | -18.79 |
CAediting_393 | chr1_1167164_+ | ENSG00000100564.7 | ENST00000558493 | hsa-miR-200b-3p | 67590054 | 67590060 | 7mer-m8 | 67590053 | 67590076 | 154 | -18.79 |
CAediting_393 | chr1_1167164_+ | ENSG00000100564.7 | ENST00000558198 | hsa-miR-200b-3p | 67590054 | 67590060 | 7mer-m8 | 67590053 | 67590076 | 154 | -18.79 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for PIGH |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for PIGH |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for PIGH |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BRCA | pathologic_stage | CAediting_999234 | chr14_67593272_- | 0.00131846881247935 | 0.39591968508133 |
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Relation with survival for PIGH |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for PIGH |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PIGH |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
PIGH | C4747891 | GLYCOSYLPHOSPHATIDYLINOSITOL BIOSYNTHESIS DEFECT 17 | 3 | GENOMICS_ENGLAND;UNIPROT |
PIGH | C0009952 | Febrile Convulsions | 1 | GENOMICS_ENGLAND |
PIGH | C0014544 | Epilepsy | 1 | GENOMICS_ENGLAND |