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Editing gene: ATP6V1C1 (CAeditome ID:528)

Gene summary for ATP6V1C1

Gene summary

Gene information	Gene symbol	ATP6V1C1
	Gene ID	528
	Gene name	ATPase H+ transporting V1 subunit C1
	Synonyms	ATP6C\|ATP6D\|VATC\|Vma5
	Cytomap	8q22.3
	Type of gene	protein-coding
	Description	V-type proton ATPase subunit C 1ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1H(+)-transporting two-sector ATPase, subunit CH+ -ATPase C subunitH+-transporting ATPase chain C, vacuolarV-ATPase C subunitV-ATPase subunit C 1subunit C of vacu
	Modification date	20210518
	UniProtAcc	P21283
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ATP6V1C1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000155097.10

RNA A-to-I editing events in Cancer.

CAediting_655838(103045781, +), CAediting_655839(103045820, +), CAediting_655840(103045826, +), CAediting_655841(103045837, +), CAediting_655842(103045843, +), CAediting_655843(103045847, +), CAediting_655844(103045861, +), CAediting_655845(103045862, +), CAediting_655846(103045891, +), CAediting_655847(103045952, +), CAediting_655848(103046232, +), CAediting_655849(103046255, +), CAediting_655850(103046319, +), CAediting_655851(103046324, +), CAediting_655852(103046336, +), CAediting_655853(103046340, +), CAediting_655854(103046346, +), CAediting_655855(103046459, +), CAediting_655856(103046464, +), CAediting_655857(103046474, +), CAediting_655858(103046475, +), CAediting_655859(103047286, +), CAediting_655860(103047287, +), CAediting_655861(103047301, +), CAediting_655862(103047308, +), CAediting_655863(103047309, +), CAediting_655864(103047313, +), CAediting_655865(103047314, +), CAediting_655866(103047341, +), CAediting_655867(103060158, +), CAediting_655868(103065805, +), CAediting_655869(103065987, +), CAediting_655870(103066041, +), CAediting_655871(103066042, +), CAediting_655872(103066893, +), CAediting_655873(103066897, +), CAediting_655874(103067237, +), CAediting_655875(103067252, +), CAediting_655876(103067276, +), CAediting_655877(103067278, +), CAediting_655878(103067279, +), CAediting_655879(103067284, +), CAediting_655880(103067288, +), CAediting_655881(103067295, +), CAediting_655882(103067301, +), CAediting_655883(103067305, +), CAediting_655884(103067319, +), CAediting_655885(103067320, +), CAediting_655886(103067342, +), CAediting_655887(103067346, +), CAediting_655888(103067347, +), CAediting_655889(103067357, +), CAediting_655890(103067656, +), CAediting_655891(103067704, +), CAediting_655892(103067718, +), CAediting_655893(103067730, +), CAediting_655894(103067853, +), CAediting_655895(103068029, +), CAediting_655896(103068032, +), CAediting_655897(103068036, +), CAediting_655898(103068092, +), CAediting_655899(103068097, +), CAediting_655900(103068105, +), CAediting_655901(103068175, +), CAediting_655902(103068221, +), CAediting_655903(103071635, +), CAediting_655904(103071655, +), CAediting_655905(103071730, +), CAediting_655906(103071743, +), CAediting_655907(103071756, +), CAediting_655908(103071758, +), CAediting_655909(103071800, +), CAediting_655910(103071814, +), CAediting_655911(103071851, +), CAediting_655912(103071852, +), CAediting_655913(103071897, +),

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RNA editing positional annotations for ATP6V1C1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_655838	chr8_103045781_+	intronic
CAediting_655839	chr8_103045820_+	intronic
CAediting_655840	chr8_103045826_+	intronic
CAediting_655841	chr8_103045837_+	intronic
CAediting_655842	chr8_103045843_+	intronic
CAediting_655843	chr8_103045847_+	intronic
CAediting_655844	chr8_103045861_+	intronic
CAediting_655845	chr8_103045862_+	intronic
CAediting_655846	chr8_103045891_+	intronic
CAediting_655847	chr8_103045952_+	intronic
CAediting_655848	chr8_103046232_+	intronic
CAediting_655849	chr8_103046255_+	intronic
CAediting_655850	chr8_103046319_+	intronic
CAediting_655851	chr8_103046324_+	intronic
CAediting_655852	chr8_103046336_+	intronic
CAediting_655853	chr8_103046340_+	intronic
CAediting_655854	chr8_103046346_+	intronic
CAediting_655855	chr8_103046459_+	intronic
CAediting_655856	chr8_103046464_+	intronic
CAediting_655857	chr8_103046474_+	intronic
CAediting_655858	chr8_103046475_+	intronic
CAediting_655859	chr8_103047286_+	intronic
CAediting_655860	chr8_103047287_+	intronic
CAediting_655861	chr8_103047301_+	intronic
CAediting_655862	chr8_103047308_+	intronic
CAediting_655863	chr8_103047309_+	intronic
CAediting_655864	chr8_103047313_+	intronic
CAediting_655865	chr8_103047314_+	intronic
CAediting_655866	chr8_103047341_+	intronic
CAediting_655867	chr8_103060158_+	ncRNA_intronic
CAediting_655868	chr8_103065805_+	ncRNA_intronic
CAediting_655869	chr8_103065987_+	ncRNA_intronic
CAediting_655870	chr8_103066041_+	ncRNA_intronic
CAediting_655871	chr8_103066042_+	ncRNA_intronic
CAediting_655872	chr8_103066893_+	ncRNA_intronic
CAediting_655873	chr8_103066897_+	ncRNA_intronic
CAediting_655874	chr8_103067237_+	ncRNA_intronic
CAediting_655875	chr8_103067252_+	ncRNA_intronic
CAediting_655876	chr8_103067276_+	ncRNA_intronic
CAediting_655877	chr8_103067278_+	ncRNA_intronic
CAediting_655878	chr8_103067279_+	ncRNA_intronic
CAediting_655879	chr8_103067284_+	ncRNA_intronic
CAediting_655880	chr8_103067288_+	ncRNA_intronic
CAediting_655881	chr8_103067295_+	ncRNA_intronic
CAediting_655882	chr8_103067301_+	ncRNA_intronic
CAediting_655883	chr8_103067305_+	ncRNA_intronic
CAediting_655884	chr8_103067319_+	ncRNA_intronic
CAediting_655885	chr8_103067320_+	ncRNA_intronic
CAediting_655886	chr8_103067342_+	ncRNA_intronic
CAediting_655887	chr8_103067346_+	ncRNA_intronic
CAediting_655888	chr8_103067347_+	ncRNA_intronic
CAediting_655889	chr8_103067357_+	ncRNA_intronic
CAediting_655890	chr8_103067656_+	ncRNA_intronic
CAediting_655891	chr8_103067704_+	ncRNA_intronic
CAediting_655892	chr8_103067718_+	ncRNA_intronic
CAediting_655893	chr8_103067730_+	ncRNA_intronic
CAediting_655894	chr8_103067853_+	ncRNA_intronic
CAediting_655895	chr8_103068029_+	ncRNA_intronic
CAediting_655896	chr8_103068032_+	ncRNA_intronic
CAediting_655897	chr8_103068036_+	ncRNA_intronic
CAediting_655898	chr8_103068092_+	ncRNA_intronic
CAediting_655899	chr8_103068097_+	ncRNA_intronic
CAediting_655900	chr8_103068105_+	ncRNA_intronic
CAediting_655901	chr8_103068175_+	ncRNA_intronic
CAediting_655902	chr8_103068221_+	ncRNA_intronic
CAediting_655903	chr8_103071635_+	UTR3
CAediting_655904	chr8_103071655_+	UTR3
CAediting_655905	chr8_103071730_+	UTR3
CAediting_655906	chr8_103071743_+	UTR3
CAediting_655907	chr8_103071756_+	UTR3
CAediting_655908	chr8_103071758_+	UTR3
CAediting_655909	chr8_103071800_+	UTR3
CAediting_655910	chr8_103071814_+	UTR3
CAediting_655911	chr8_103071851_+	UTR3
CAediting_655912	chr8_103071852_+	UTR3
CAediting_655913	chr8_103071897_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_655838	chr8_103045781_+	SINE	Alu	AluY
CAediting_655839	chr8_103045820_+	SINE	Alu	AluY
CAediting_655840	chr8_103045826_+	SINE	Alu	AluY
CAediting_655841	chr8_103045837_+	SINE	Alu	AluY
CAediting_655842	chr8_103045843_+	SINE	Alu	AluY
CAediting_655843	chr8_103045847_+	SINE	Alu	AluY
CAediting_655844	chr8_103045861_+	SINE	Alu	AluY
CAediting_655845	chr8_103045862_+	SINE	Alu	AluY
CAediting_655846	chr8_103045891_+	SINE	Alu	AluY
CAediting_655847	chr8_103045952_+	SINE	Alu	AluY
CAediting_655848	chr8_103046232_+	SINE	Alu	AluJr
CAediting_655849	chr8_103046255_+	SINE	Alu	AluJr
CAediting_655850	chr8_103046319_+	SINE	Alu	AluJr
CAediting_655851	chr8_103046324_+	SINE	Alu	AluJr
CAediting_655852	chr8_103046336_+	SINE	Alu	AluJr
CAediting_655853	chr8_103046340_+	SINE	Alu	AluJr
CAediting_655854	chr8_103046346_+	SINE	Alu	AluJr
CAediting_655855	chr8_103046459_+	SINE	Alu	AluJr
CAediting_655856	chr8_103046464_+	SINE	Alu	AluJr
CAediting_655857	chr8_103046474_+	SINE	Alu	AluJr
CAediting_655858	chr8_103046475_+	SINE	Alu	AluJr
CAediting_655859	chr8_103047286_+	SINE	Alu	AluJo
CAediting_655860	chr8_103047287_+	SINE	Alu	AluJo
CAediting_655861	chr8_103047301_+	SINE	Alu	AluJo
CAediting_655862	chr8_103047308_+	SINE	Alu	AluJo
CAediting_655863	chr8_103047309_+	SINE	Alu	AluJo
CAediting_655864	chr8_103047313_+	SINE	Alu	AluJo
CAediting_655865	chr8_103047314_+	SINE	Alu	AluJo
CAediting_655866	chr8_103047341_+	SINE	Alu	AluJo
CAediting_655867	chr8_103060158_+	SINE	Alu	AluSz
CAediting_655868	chr8_103065805_+	SINE	Alu	AluSc
CAediting_655869	chr8_103065987_+	SINE	Alu	AluSc
CAediting_655870	chr8_103066041_+	SINE	Alu	AluSc
CAediting_655871	chr8_103066042_+	SINE	Alu	AluSc
CAediting_655872	chr8_103066893_+	SINE	Alu	FLAM_A
CAediting_655873	chr8_103066897_+	SINE	Alu	FLAM_A
CAediting_655874	chr8_103067237_+	SINE	Alu	AluSx1
CAediting_655875	chr8_103067252_+	SINE	Alu	AluSx1
CAediting_655876	chr8_103067276_+	SINE	Alu	AluSx1
CAediting_655877	chr8_103067278_+	SINE	Alu	AluSx1
CAediting_655878	chr8_103067279_+	SINE	Alu	AluSx1
CAediting_655879	chr8_103067284_+	SINE	Alu	AluSx1
CAediting_655880	chr8_103067288_+	SINE	Alu	AluSx1
CAediting_655881	chr8_103067295_+	SINE	Alu	AluSx1
CAediting_655882	chr8_103067301_+	SINE	Alu	AluSx1
CAediting_655883	chr8_103067305_+	SINE	Alu	AluSx1
CAediting_655884	chr8_103067319_+	SINE	Alu	AluSx1
CAediting_655885	chr8_103067320_+	SINE	Alu	AluSx1
CAediting_655886	chr8_103067342_+	SINE	Alu	AluSx1
CAediting_655887	chr8_103067346_+	SINE	Alu	AluSx1
CAediting_655888	chr8_103067347_+	SINE	Alu	AluSx1
CAediting_655889	chr8_103067357_+	SINE	Alu	AluSx1
CAediting_655890	chr8_103067656_+	SINE	Alu	AluSq
CAediting_655891	chr8_103067704_+	SINE	Alu	AluSq
CAediting_655892	chr8_103067718_+	SINE	Alu	AluSq
CAediting_655893	chr8_103067730_+	SINE	Alu	AluSq
CAediting_655894	chr8_103067853_+	SINE	Alu	AluSq
CAediting_655895	chr8_103068029_+	SINE	Alu	AluJr
CAediting_655896	chr8_103068032_+	SINE	Alu	AluJr
CAediting_655897	chr8_103068036_+	SINE	Alu	AluJr
CAediting_655898	chr8_103068092_+	SINE	Alu	AluJr
CAediting_655899	chr8_103068097_+	SINE	Alu	AluJr
CAediting_655900	chr8_103068105_+	SINE	Alu	AluJr
CAediting_655901	chr8_103068175_+	SINE	Alu	AluJr
CAediting_655902	chr8_103068221_+	SINE	Alu	AluJr
CAediting_655903	chr8_103071635_+	SINE	Alu	AluJo
CAediting_655904	chr8_103071655_+	SINE	Alu	AluJo
CAediting_655905	chr8_103071730_+	SINE	Alu	AluJo
CAediting_655906	chr8_103071743_+	SINE	Alu	AluJo
CAediting_655907	chr8_103071756_+	SINE	Alu	AluJo
CAediting_655908	chr8_103071758_+	SINE	Alu	AluJo
CAediting_655909	chr8_103071800_+	SINE	Alu	AluJo
CAediting_655910	chr8_103071814_+	SINE	Alu	AluJo
CAediting_655911	chr8_103071851_+	SINE	Alu	AluJo
CAediting_655912	chr8_103071852_+	SINE	Alu	AluJo
CAediting_655913	chr8_103071897_+	SINE	Alu	AluJo

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RNA A-to-I editing events in the alternative splicing sites for ATP6V1C1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000155097.10.ATP6V1C1.

Correlation between RNA A-to-I editing and PSI for ENSG00000155097.10.ATP6V1C1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATP6V1C1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ATP6V1C1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ATP6V1C1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_655904	chr8_103071655_+	ENSG00000155097.10	ENST00000395862	hsa-miR-3940-3p	103071652	103071659	8mer-1a	103071638	103071659	155.00	-17.96
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6765-5p	103071728	103071734	7mer-m8	103071714	103071735	155.00	-28.33
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6787-5p	103071726	103071731	6mer	103071711	103071732	142.00	-22.17
CAediting_655906	chr8_103071743_+	ENSG00000155097.10	ENST00000395862	hsa-miR-637	103071736	103071742	7mer-m8	103071720	103071743	150.00	-24.63
CAediting_655906	chr8_103071743_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6852-5p	103071737	103071743	7mer-m8	103071725	103071744	158.00	-27.48
CAediting_655906	chr8_103071743_+	ENSG00000155097.10	ENST00000395862	hsa-miR-7851-3p	103071738	103071745	8mer-1a	103071725	103071745	170.00	-33.63
CAediting_655907	chr8_103071756_+	ENSG00000155097.10	ENST00000395862	hsa-miR-10394-5p	103071752	103071758	7mer-m8	103071736	103071759	156.00	-24.33
CAediting_655907	chr8_103071756_+	ENSG00000155097.10	ENST00000395862	hsa-miR-1205	103071752	103071758	7mer-m8	103071738	103071759	153.00	-19.89
CAediting_655907	chr8_103071756_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6511b-5p	103071751	103071757	7mer-m8	103071730	103071758	159.00	-33.85
CAediting_655907	chr8_103071756_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6511b-5p	103071751	103071757	7mer-m8	103071730	103071758	159.00	-33.85
CAediting_655907	chr8_103071756_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6811-5p	103071751	103071757	7mer-m8	103071737	103071758	156.00	-21.43
CAediting_655908	chr8_103071758_+	ENSG00000155097.10	ENST00000395862	hsa-miR-100-5p	103071754	103071760	7mer-m8	103071738	103071761	163.00	-26.75
CAediting_655908	chr8_103071758_+	ENSG00000155097.10	ENST00000395862	hsa-miR-99a-5p	103071754	103071760	7mer-m8	103071738	103071761	162.00	-25.63
CAediting_655908	chr8_103071758_+	ENSG00000155097.10	ENST00000395862	hsa-miR-99b-5p	103071754	103071760	7mer-m8	103071738	103071761	159.00	-27.81
CAediting_655909	chr8_103071800_+	ENSG00000155097.10	ENST00000395862	hsa-miR-191-3p	103071796	103071803	8mer-1a	103071782	103071803	159.00	-15.97
CAediting_655912	chr8_103071852_+	ENSG00000155097.10	ENST00000395862	hsa-miR-125a-5p	103071847	103071853	7mer-m8	103071831	103071854	140.00	-18.24
CAediting_655912	chr8_103071852_+	ENSG00000155097.10	ENST00000395862	hsa-miR-125b-5p	103071847	103071853	7mer-m8	103071833	103071854	142.00	-16.90
CAediting_655912	chr8_103071852_+	ENSG00000155097.10	ENST00000395862	hsa-miR-125b-5p	103071847	103071853	7mer-m8	103071833	103071854	142.00	-16.90
CAediting_655912	chr8_103071852_+	ENSG00000155097.10	ENST00000395862	hsa-miR-4319	103071847	103071853	7mer-m8	103071838	103071854	149.00	-19.74
CAediting_655903	chr8_103071635_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6790-3p	103071633	103071639	7mer-m8	103071620	103071640	142.00	-14.42

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_655906	chr8_103071743_+	ENSG00000155097.10	ENST00000395862	hsa-miR-12126	103071738	103071745	8mer-1a	103071722	103071745	147	-14.89
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-1233-5p	103071724	103071730	7mer-m8	103071706	103071731	147	-26.42
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-1233-5p	103071724	103071730	7mer-m8	103071706	103071731	147	-26.42
CAediting_655904	chr8_103071655_+	ENSG00000155097.10	ENST00000395862	hsa-miR-1262	103071648	103071654	7mer-m8	103071634	103071655	142	-16.43
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-1273h-5p	103071723	103071729	7mer-m8	103071712	103071730	141	-18.43
CAediting_655912	chr8_103071852_+	ENSG00000155097.10	ENST00000395862	hsa-miR-188-5p	103071850	103071856	7mer-m8	103071837	103071857	151	-19.52
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-30b-3p	103071723	103071729	7mer-m8	103071711	103071730	146	-15.96
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-3689a-3p	103071723	103071729	7mer-m8	103071709	103071730	146	-16.26
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-3689b-3p	103071723	103071729	7mer-m8	103071709	103071730	146	-17.57
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-3689c	103071723	103071729	7mer-m8	103071709	103071730	146	-17.57
CAediting_655913	chr8_103071897_+	ENSG00000155097.10	ENST00000395862	hsa-miR-4633-5p	103071892	103071899	8mer-1a	103071882	103071899	155	-16.27
CAediting_655904	chr8_103071655_+	ENSG00000155097.10	ENST00000395862	hsa-miR-4701-3p	103071648	103071654	7mer-m8	103071635	103071655	149	-19.08
CAediting_655911	chr8_103071851_+	ENSG00000155097.10	ENST00000395862	hsa-miR-4780	103071848	103071855	8mer-1a	103071834	103071855	150	-17.6
CAediting_655912	chr8_103071852_+	ENSG00000155097.10	ENST00000395862	hsa-miR-4780	103071848	103071855	8mer-1a	103071834	103071855	150	-17.6
CAediting_655909	chr8_103071800_+	ENSG00000155097.10	ENST00000395862	hsa-miR-5008-3p	103071796	103071803	8mer-1a	103071783	103071803	140	-9.87
CAediting_655911	chr8_103071851_+	ENSG00000155097.10	ENST00000395862	hsa-miR-623	103071849	103071855	7mer-m8	103071830	103071856	147	-27.14
CAediting_655912	chr8_103071852_+	ENSG00000155097.10	ENST00000395862	hsa-miR-623	103071849	103071855	7mer-m8	103071830	103071856	147	-27.14
CAediting_655913	chr8_103071897_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6514-3p	103071890	103071896	7mer-m8	103071877	103071897	147	-17.44
CAediting_655904	chr8_103071655_+	ENSG00000155097.10	ENST00000395862	hsa-miR-661	103071651	103071657	7mer-m8	103071635	103071658	150	-21.3
CAediting_655904	chr8_103071655_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6736-5p	103071648	103071654	7mer-m8	103071633	103071655	148	-22.5
CAediting_655909	chr8_103071800_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6737-3p	103071796	103071803	8mer-1a	103071782	103071803	140	-12.63
CAediting_655904	chr8_103071655_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6742-3p	103071650	103071656	7mer-m8	103071638	103071657	140	-13.94
CAediting_655904	chr8_103071655_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6776-5p	103071649	103071655	7mer-m8	103071637	103071656	152	-22.73
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6778-5p	103071724	103071730	7mer-m8	103071710	103071731	150	-23.18
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6779-5p	103071723	103071729	7mer-m8	103071707	103071730	149	-24.64
CAediting_655905	chr8_103071730_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6780a-5p	103071723	103071729	7mer-m8	103071708	103071730	141	-20.59
CAediting_655908	chr8_103071758_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6804-3p	103071756	103071762	7mer-m8	103071741	103071763	147	-21.69
CAediting_655910	chr8_103071814_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6864-3p	103071808	103071813	6mer	103071793	103071814	140	-19.36
CAediting_655912	chr8_103071852_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6866-3p	103071850	103071856	7mer-m8	103071836	103071857	149	-15.69
CAediting_655910	chr8_103071814_+	ENSG00000155097.10	ENST00000395862	hsa-miR-921	103071810	103071816	7mer-m8	103071793	103071817	141	-10.3

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000155097.10	ENST00000395862	hsa-miR-4512	103070802	103070809	8mer-1a	103070788	103070809	147	-17.22
CAediting_1229413	chr17_67471544_+	ENSG00000155097.10	ENST00000395862	hsa-miR-548aa	103072822	103072828	7mer-m8	103072805	103072829	140	-15.21
CAediting_1229414	chr17_67471546_+	ENSG00000155097.10	ENST00000395862	hsa-miR-548aa	103072599	103072605	7mer-m8	103072584	103072606	147	-11.81
CAediting_1368054	chr19_46709310_-	ENSG00000155097.10	ENST00000395862	hsa-miR-320e	103070807	103070813	7mer-m8	103070797	103070814	145	-19.36
CAediting_77128	chr1_85133844_+	ENSG00000155097.10	ENST00000395862	hsa-miR-4423-3p	103070894	103070900	7mer-m8	103070880	103070901	143	-12.61
CAediting_524911	chr7_5495852_-	ENSG00000155097.10	ENST00000395862	hsa-miR-589-3p	103070790	103070797	8mer-1a	103070773	103070797	163	-24.72
CAediting_524911	chr7_5495852_-	ENSG00000155097.10	ENST00000395862	hsa-miR-589-3p	103071641	103071647	7mer-m8	103071626	103071648	152	-17.79
CAediting_468389	chr6_31355314_-	ENSG00000155097.10	ENST00000395862	hsa-miR-6891-5p	103070866	103070872	7mer-m8	103070855	103070873	148	-22.21

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000155097.10	ENST00000395862	hsa-miR-195-3p	103072582	103072588	7mer-m8	103072568	103072589	147	-10.3
CAediting_1368054	chr19_46709310_-	ENSG00000155097.10	ENST00000395862	hsa-miR-320e	103072166	103072172	7mer-m8	103072156	103072173	146	-14.69
CAediting_1054808	chr15_66496985_-	ENSG00000155097.10	ENST00000395862	hsa-miR-4512	103069990	103069996	7mer-m8	103069976	103069997	140	-12.73
CAediting_228905	chr2_188297554_+	ENSG00000155097.10	ENST00000395862	hsa-miR-561-3p	103072244	103072251	8mer-1a	103072232	103072251	151	-5.73
CAediting_228905	chr2_188297554_+	ENSG00000155097.10	ENST00000395862	hsa-miR-561-3p	103072533	103072539	7mer-m8	103072519	103072540	141	-10.04
CAediting_580943	chr7_100356700_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6840-3p	103070835	103070841	7mer-m8	103070821	103070842	147	-27.55
CAediting_580943	chr7_100356700_+	ENSG00000155097.10	ENST00000395862	hsa-miR-6840-3p	103071706	103071712	7mer-m8	103071692	103071713	152	-28.97

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ATP6V1C1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000395862.6	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_655903	ENST00000395862.6	chr8_103071635_+	-1500.30	-1500.60	-1517.30
CAediting_655904	ENST00000395862.6	chr8_103071655_+	-1500.40	-1500.60	-1517.30
CAediting_655905	ENST00000395862.6	chr8_103071730_+	-1502.20	-1500.60	-1517.30
CAediting_655906	ENST00000395862.6	chr8_103071743_+	-1504.20	-1500.60	-1517.30
CAediting_655907	ENST00000395862.6	chr8_103071756_+	-1504.30	-1500.60	-1517.30
CAediting_655908	ENST00000395862.6	chr8_103071758_+	-1501.80	-1500.60	-1517.30
CAediting_655909	ENST00000395862.6	chr8_103071800_+	-1500.20	-1500.60	-1517.30
CAediting_655910	ENST00000395862.6	chr8_103071814_+	-1500.80	-1500.60	-1517.30
CAediting_655911	ENST00000395862.6	chr8_103071851_+	-1502.30	-1500.60	-1517.30
CAediting_655912	ENST00000395862.6	chr8_103071852_+	-1505.00	-1500.60	-1517.30
CAediting_655913	ENST00000395862.6	chr8_103071897_+	-1501.40	-1500.60	-1517.30

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Relation with ADAR for ATP6V1C1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for ATP6V1C1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ATP6V1C1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ATP6V1C1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
ATP6V1C1	P21283	DB09552	Thonzonium	V-type proton ATPase subunit C 1	SmallMoleculeDrug	approved
ATP6V1C1	P21283	DB01133	Tiludronic acid	V-type proton ATPase subunit C 1	SmallMoleculeDrug	approved\|investigational\|vet_approved

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RelatedDiseases for ATP6V1C1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene