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Editing gene: CAB39 (CAeditome ID:51719)

Gene summary for CAB39

Gene summary

Gene information	Gene symbol	CAB39
	Gene ID	51719
	Gene name	calcium binding protein 39
	Synonyms	CGI-66\|MO25
	Cytomap	2q37.1
	Type of gene	protein-coding
	Description	calcium-binding protein 39MO25alpha
	Modification date	20210518
	UniProtAcc	Q9Y376
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CAB39	GO:0030295	Calcium-binding protein 39	19892943
CAB39	GO:0043539	Calcium-binding protein 39	19892943
CAB39	GO:0043539	Calcium-binding protein 39	24393035
CAB39	GO:0043539	Calcium-binding protein 39	24393035
CAB39	GO:0007165	Calcium-binding protein 39	24393035
CAB39	GO:0010800	Calcium-binding protein 39	24393035
CAB39	GO:0018105	Calcium-binding protein 39	24393035
CAB39	GO:0035556	Calcium-binding protein 39	24393035
CAB39	GO:0071902	Calcium-binding protein 39	19892943
CAB39	GO:0071902	Calcium-binding protein 39	24393035

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RNA A-to-I events for CAB39

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000135932.9

RNA A-to-I editing events in Cancer.

CAediting_247616(230715726, +), CAediting_247617(230715802, +), CAediting_247618(230715803, +), CAediting_247619(230715830, +), CAediting_247620(230715842, +), CAediting_247621(230715850, +), CAediting_247622(230715866, +), CAediting_247623(230715867, +), CAediting_247624(230715883, +), CAediting_247625(230715889, +), CAediting_247626(230715909, +), CAediting_247627(230716611, +), CAediting_247628(230716820, +), CAediting_247629(230716831, +), CAediting_247630(230716839, +), CAediting_247631(230716843, +), CAediting_247632(230716850, +), CAediting_247633(230716853, +), CAediting_247634(230716896, +), CAediting_247635(230720365, +), CAediting_247636(230720461, +), CAediting_247637(230720575, +), CAediting_247638(230720619, +), CAediting_247639(230720681, +), CAediting_247640(230720682, +), CAediting_247641(230720694, +), CAediting_247642(230721229, +), CAediting_247643(230721230, +), CAediting_247644(230721300, +), CAediting_247645(230721351, +), CAediting_247646(230721380, +), CAediting_247647(230722431, +), CAediting_247648(230723989, +), CAediting_247649(230724071, +), CAediting_247650(230724100, +), CAediting_247651(230724118, +), CAediting_247652(230724126, +), CAediting_247653(230724127, +), CAediting_247654(230724136, +), CAediting_247655(230724560, +), CAediting_247656(230724570, +), CAediting_247657(230724587, +), CAediting_247658(230724631, +), CAediting_247659(230726263, +), CAediting_247660(230727434, +), CAediting_247661(230727438, +), CAediting_247662(230727564, +), CAediting_247663(230727591, +), CAediting_247664(230727697, +), CAediting_247665(230727961, +), CAediting_247666(230728038, +), CAediting_247667(230728063, +), CAediting_247668(230728159, +), CAediting_247669(230728220, +), CAediting_247670(230728403, +), CAediting_247671(230728404, +), CAediting_247672(230728414, +), CAediting_247673(230728421, +), CAediting_247674(230728427, +), CAediting_247675(230728435, +), CAediting_247676(230728439, +), CAediting_247677(230728449, +), CAediting_247678(230728475, +), CAediting_247679(230728554, +), CAediting_247680(230728710, +), CAediting_247681(230728713, +), CAediting_247682(230728739, +), CAediting_247683(230728743, +), CAediting_247684(230728751, +), CAediting_247685(230728835, +), CAediting_247686(230728848, +), CAediting_247687(230728851, +), CAediting_247688(230728876, +), CAediting_247689(230729595, +), CAediting_247690(230729598, +), CAediting_247691(230729632, +), CAediting_247692(230729633, +), CAediting_247693(230730133, +), CAediting_247694(230730136, +), CAediting_247695(230730149, +), CAediting_247696(230730158, +), CAediting_247697(230730171, +), CAediting_247698(230730177, +), CAediting_247699(230730184, +), CAediting_247700(230730189, +), CAediting_247701(230730203, +), CAediting_247702(230730210, +), CAediting_247703(230730221, +), CAediting_247704(230730238, +), CAediting_247705(230730256, +), CAediting_247706(230730258, +), CAediting_247707(230730627, +), CAediting_247708(230731561, +), CAediting_247709(230731572, +), CAediting_247710(230731577, +), CAediting_247711(230731606, +), CAediting_247712(230731636, +), CAediting_247713(230731642, +), CAediting_247714(230731713, +), CAediting_247715(230731747, +), CAediting_247716(230731757, +), CAediting_247717(230731758, +), CAediting_247718(230735296, +), CAediting_247719(230744436, +), CAediting_247720(230745807, +), CAediting_247721(230745810, +), CAediting_247722(230745837, +), CAediting_247723(230747084, +), CAediting_247724(230747098, +), CAediting_247725(230747144, +), CAediting_247726(230747145, +), CAediting_247727(230747160, +), CAediting_247728(230748550, +), CAediting_247729(230748551, +), CAediting_247730(230748572, +), CAediting_247731(230748591, +), CAediting_247732(230748619, +), CAediting_247733(230748630, +), CAediting_247734(230748635, +), CAediting_247735(230748644, +), CAediting_247736(230748646, +), CAediting_247737(230748648, +), CAediting_247738(230748655, +), CAediting_247739(230748656, +), CAediting_247740(230748659, +), CAediting_247741(230748666, +), CAediting_247742(230748675, +), CAediting_247743(230748685, +), CAediting_247744(230748727, +), CAediting_247745(230748739, +), CAediting_247746(230753477, +), CAediting_247747(230753493, +), CAediting_247748(230753499, +), CAediting_247749(230753530, +), CAediting_247750(230753543, +), CAediting_247751(230753551, +), CAediting_247752(230753554, +), CAediting_247753(230753567, +), CAediting_247754(230753594, +), CAediting_247755(230753600, +), CAediting_247756(230753604, +), CAediting_247757(230753616, +), CAediting_247758(230753626, +), CAediting_247759(230753632, +), CAediting_247760(230753649, +), CAediting_247761(230753669, +), CAediting_247762(230753688, +), CAediting_247763(230753689, +), CAediting_247764(230753694, +), CAediting_247765(230753701, +), CAediting_247766(230754562, +), CAediting_247767(230754580, +), CAediting_247768(230754588, +), CAediting_247769(230754593, +), CAediting_247770(230754612, +), CAediting_247771(230754648, +), CAediting_247772(230754660, +), CAediting_247773(230754664, +), CAediting_247774(230754708, +), CAediting_247775(230754728, +), CAediting_247776(230754739, +), CAediting_247777(230754782, +), CAediting_247778(230754799, +), CAediting_247779(230757203, +), CAediting_247780(230757237, +), CAediting_247781(230757268, +), CAediting_247782(230757305, +), CAediting_247783(230757371, +), CAediting_247784(230760432, +), CAediting_247785(230760486, +), CAediting_247786(230761972, +), CAediting_247787(230761977, +), CAediting_247788(230761988, +), CAediting_247789(230761994, +), CAediting_247790(230762034, +), CAediting_247791(230762037, +), CAediting_247792(230762047, +), CAediting_247793(230762049, +), CAediting_247794(230762057, +), CAediting_247795(230762060, +), CAediting_247796(230762063, +), CAediting_247797(230762073, +), CAediting_247798(230762160, +), CAediting_247799(230762169, +), CAediting_247800(230762182, +), CAediting_247801(230763445, +), CAediting_247802(230763449, +), CAediting_247803(230763461, +), CAediting_247804(230763502, +), CAediting_247805(230763505, +), CAediting_247806(230763513, +), CAediting_247807(230763858, +), CAediting_247808(230763860, +), CAediting_247809(230763889, +), CAediting_247810(230763902, +), CAediting_247811(230763936, +), CAediting_247812(230763940, +), CAediting_247813(230763945, +), CAediting_247814(230763946, +), CAediting_247815(230763969, +), CAediting_247816(230763975, +), CAediting_247817(230763991, +), CAediting_247818(230763995, +), CAediting_247819(230764001, +), CAediting_247820(230764015, +), CAediting_247821(230764071, +), CAediting_247822(230764074, +), CAediting_247823(230765007, +), CAediting_247824(230765128, +), CAediting_247825(230765136, +), CAediting_247826(230766567, +), CAediting_247827(230766622, +), CAediting_247828(230766654, +), CAediting_247829(230766671, +), CAediting_247830(230769707, +), CAediting_247831(230769724, +), CAediting_247832(230769729, +), CAediting_247833(230769755, +), CAediting_247834(230769756, +), CAediting_247835(230769764, +), CAediting_247836(230769783, +), CAediting_247837(230769792, +), CAediting_247838(230769800, +), CAediting_247839(230769801, +), CAediting_247840(230769802, +), CAediting_247841(230769803, +), CAediting_247842(230769878, +), CAediting_247843(230769909, +), CAediting_247844(230769939, +), CAediting_247845(230769941, +), CAediting_247846(230772565, +), CAediting_247847(230772610, +), CAediting_247848(230772667, +), CAediting_247849(230772692, +), CAediting_247850(230772746, +), CAediting_247851(230772747, +), CAediting_247852(230780827, +), CAediting_247853(230780872, +), CAediting_247854(230780900, +), CAediting_247855(230780955, +), CAediting_247856(230780961, +), CAediting_247857(230781002, +), CAediting_247858(230781034, +), CAediting_247859(230781990, +), CAediting_247860(230782134, +), CAediting_247861(230783660, +), CAediting_247862(230783699, +), CAediting_247863(230785734, +), CAediting_247864(230785764, +), CAediting_247865(230785800, +), CAediting_247866(230785812, +), CAediting_247867(230785817, +), CAediting_247868(230786004, +), CAediting_247869(230786017, +), CAediting_247870(230786113, +), CAediting_247871(230786202, +), CAediting_247872(230786233, +), CAediting_247873(230786257, +), CAediting_247874(230786273, +), CAediting_247875(230789961, +), CAediting_247876(230790073, +), CAediting_247877(230790167, +), CAediting_247878(230799899, +), CAediting_247879(230799946, +), CAediting_247880(230799971, +),

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RNA editing positional annotations for CAB39 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_247616	chr2_230715726_+	intronic
CAediting_247617	chr2_230715802_+	intronic
CAediting_247618	chr2_230715803_+	intronic
CAediting_247619	chr2_230715830_+	intronic
CAediting_247620	chr2_230715842_+	intronic
CAediting_247621	chr2_230715850_+	intronic
CAediting_247622	chr2_230715866_+	intronic
CAediting_247623	chr2_230715867_+	intronic
CAediting_247624	chr2_230715883_+	intronic
CAediting_247625	chr2_230715889_+	intronic
CAediting_247626	chr2_230715909_+	intronic
CAediting_247627	chr2_230716611_+	intronic
CAediting_247628	chr2_230716820_+	intronic
CAediting_247629	chr2_230716831_+	intronic
CAediting_247630	chr2_230716839_+	intronic
CAediting_247631	chr2_230716843_+	intronic
CAediting_247632	chr2_230716850_+	intronic
CAediting_247633	chr2_230716853_+	intronic
CAediting_247634	chr2_230716896_+	intronic
CAediting_247635	chr2_230720365_+	intronic
CAediting_247636	chr2_230720461_+	intronic
CAediting_247637	chr2_230720575_+	intronic
CAediting_247638	chr2_230720619_+	intronic
CAediting_247639	chr2_230720681_+	intronic
CAediting_247640	chr2_230720682_+	intronic
CAediting_247641	chr2_230720694_+	intronic
CAediting_247642	chr2_230721229_+	intronic
CAediting_247643	chr2_230721230_+	intronic
CAediting_247644	chr2_230721300_+	intronic
CAediting_247645	chr2_230721351_+	intronic
CAediting_247646	chr2_230721380_+	intronic
CAediting_247647	chr2_230722431_+	intronic
CAediting_247648	chr2_230723989_+	intronic
CAediting_247649	chr2_230724071_+	intronic
CAediting_247650	chr2_230724100_+	intronic
CAediting_247651	chr2_230724118_+	intronic
CAediting_247652	chr2_230724126_+	intronic
CAediting_247653	chr2_230724127_+	intronic
CAediting_247654	chr2_230724136_+	intronic
CAediting_247655	chr2_230724560_+	intronic
CAediting_247656	chr2_230724570_+	intronic
CAediting_247657	chr2_230724587_+	intronic
CAediting_247658	chr2_230724631_+	intronic
CAediting_247659	chr2_230726263_+	intronic
CAediting_247660	chr2_230727434_+	intronic
CAediting_247661	chr2_230727438_+	intronic
CAediting_247662	chr2_230727564_+	intronic
CAediting_247663	chr2_230727591_+	intronic
CAediting_247664	chr2_230727697_+	intronic
CAediting_247665	chr2_230727961_+	intronic
CAediting_247666	chr2_230728038_+	intronic
CAediting_247667	chr2_230728063_+	intronic
CAediting_247668	chr2_230728159_+	intronic
CAediting_247669	chr2_230728220_+	intronic
CAediting_247670	chr2_230728403_+	intronic
CAediting_247671	chr2_230728404_+	intronic
CAediting_247672	chr2_230728414_+	intronic
CAediting_247673	chr2_230728421_+	intronic
CAediting_247674	chr2_230728427_+	intronic
CAediting_247675	chr2_230728435_+	intronic
CAediting_247676	chr2_230728439_+	intronic
CAediting_247677	chr2_230728449_+	intronic
CAediting_247678	chr2_230728475_+	intronic
CAediting_247679	chr2_230728554_+	intronic
CAediting_247680	chr2_230728710_+	intronic
CAediting_247681	chr2_230728713_+	intronic
CAediting_247682	chr2_230728739_+	intronic
CAediting_247683	chr2_230728743_+	intronic
CAediting_247684	chr2_230728751_+	intronic
CAediting_247685	chr2_230728835_+	intronic
CAediting_247686	chr2_230728848_+	intronic
CAediting_247687	chr2_230728851_+	intronic
CAediting_247688	chr2_230728876_+	intronic
CAediting_247689	chr2_230729595_+	intronic
CAediting_247690	chr2_230729598_+	intronic
CAediting_247691	chr2_230729632_+	intronic
CAediting_247692	chr2_230729633_+	intronic
CAediting_247693	chr2_230730133_+	intronic
CAediting_247694	chr2_230730136_+	intronic
CAediting_247695	chr2_230730149_+	intronic
CAediting_247696	chr2_230730158_+	intronic
CAediting_247697	chr2_230730171_+	intronic
CAediting_247698	chr2_230730177_+	intronic
CAediting_247699	chr2_230730184_+	intronic
CAediting_247700	chr2_230730189_+	intronic
CAediting_247701	chr2_230730203_+	intronic
CAediting_247702	chr2_230730210_+	intronic
CAediting_247703	chr2_230730221_+	intronic
CAediting_247704	chr2_230730238_+	intronic
CAediting_247705	chr2_230730256_+	intronic
CAediting_247706	chr2_230730258_+	intronic
CAediting_247707	chr2_230730627_+	intronic
CAediting_247708	chr2_230731561_+	intronic
CAediting_247709	chr2_230731572_+	intronic
CAediting_247710	chr2_230731577_+	intronic
CAediting_247711	chr2_230731606_+	intronic
CAediting_247712	chr2_230731636_+	intronic
CAediting_247713	chr2_230731642_+	intronic
CAediting_247714	chr2_230731713_+	intronic
CAediting_247715	chr2_230731747_+	intronic
CAediting_247716	chr2_230731757_+	intronic
CAediting_247717	chr2_230731758_+	intronic
CAediting_247718	chr2_230735296_+	intronic
CAediting_247719	chr2_230744436_+	intronic
CAediting_247720	chr2_230745807_+	intronic
CAediting_247721	chr2_230745810_+	intronic
CAediting_247722	chr2_230745837_+	intronic
CAediting_247723	chr2_230747084_+	intronic
CAediting_247724	chr2_230747098_+	intronic
CAediting_247725	chr2_230747144_+	intronic
CAediting_247726	chr2_230747145_+	intronic
CAediting_247727	chr2_230747160_+	intronic
CAediting_247728	chr2_230748550_+	intronic
CAediting_247729	chr2_230748551_+	intronic
CAediting_247730	chr2_230748572_+	intronic
CAediting_247731	chr2_230748591_+	intronic
CAediting_247732	chr2_230748619_+	intronic
CAediting_247733	chr2_230748630_+	intronic
CAediting_247734	chr2_230748635_+	intronic
CAediting_247735	chr2_230748644_+	intronic
CAediting_247736	chr2_230748646_+	intronic
CAediting_247737	chr2_230748648_+	intronic
CAediting_247738	chr2_230748655_+	intronic
CAediting_247739	chr2_230748656_+	intronic
CAediting_247740	chr2_230748659_+	intronic
CAediting_247741	chr2_230748666_+	intronic
CAediting_247742	chr2_230748675_+	intronic
CAediting_247743	chr2_230748685_+	intronic
CAediting_247744	chr2_230748727_+	intronic
CAediting_247745	chr2_230748739_+	intronic
CAediting_247746	chr2_230753477_+	intronic
CAediting_247747	chr2_230753493_+	intronic
CAediting_247748	chr2_230753499_+	intronic
CAediting_247749	chr2_230753530_+	intronic
CAediting_247750	chr2_230753543_+	intronic
CAediting_247751	chr2_230753551_+	intronic
CAediting_247752	chr2_230753554_+	intronic
CAediting_247753	chr2_230753567_+	intronic
CAediting_247754	chr2_230753594_+	intronic
CAediting_247755	chr2_230753600_+	intronic
CAediting_247756	chr2_230753604_+	intronic
CAediting_247757	chr2_230753616_+	intronic
CAediting_247758	chr2_230753626_+	intronic
CAediting_247759	chr2_230753632_+	intronic
CAediting_247760	chr2_230753649_+	intronic
CAediting_247761	chr2_230753669_+	intronic
CAediting_247762	chr2_230753688_+	intronic
CAediting_247763	chr2_230753689_+	intronic
CAediting_247764	chr2_230753694_+	intronic
CAediting_247765	chr2_230753701_+	intronic
CAediting_247766	chr2_230754562_+	intronic
CAediting_247767	chr2_230754580_+	intronic
CAediting_247768	chr2_230754588_+	intronic
CAediting_247769	chr2_230754593_+	intronic
CAediting_247770	chr2_230754612_+	intronic
CAediting_247771	chr2_230754648_+	intronic
CAediting_247772	chr2_230754660_+	intronic
CAediting_247773	chr2_230754664_+	intronic
CAediting_247774	chr2_230754708_+	intronic
CAediting_247775	chr2_230754728_+	intronic
CAediting_247776	chr2_230754739_+	intronic
CAediting_247777	chr2_230754782_+	intronic
CAediting_247778	chr2_230754799_+	intronic
CAediting_247779	chr2_230757203_+	intronic
CAediting_247780	chr2_230757237_+	intronic
CAediting_247781	chr2_230757268_+	intronic
CAediting_247782	chr2_230757305_+	intronic
CAediting_247783	chr2_230757371_+	intronic
CAediting_247784	chr2_230760432_+	intronic
CAediting_247785	chr2_230760486_+	intronic
CAediting_247786	chr2_230761972_+	intronic
CAediting_247787	chr2_230761977_+	intronic
CAediting_247788	chr2_230761988_+	intronic
CAediting_247789	chr2_230761994_+	intronic
CAediting_247790	chr2_230762034_+	intronic
CAediting_247791	chr2_230762037_+	intronic
CAediting_247792	chr2_230762047_+	intronic
CAediting_247793	chr2_230762049_+	intronic
CAediting_247794	chr2_230762057_+	intronic
CAediting_247795	chr2_230762060_+	intronic
CAediting_247796	chr2_230762063_+	intronic
CAediting_247797	chr2_230762073_+	intronic
CAediting_247798	chr2_230762160_+	intronic
CAediting_247799	chr2_230762169_+	intronic
CAediting_247800	chr2_230762182_+	intronic
CAediting_247801	chr2_230763445_+	intronic
CAediting_247802	chr2_230763449_+	intronic
CAediting_247803	chr2_230763461_+	intronic
CAediting_247804	chr2_230763502_+	intronic
CAediting_247805	chr2_230763505_+	intronic
CAediting_247806	chr2_230763513_+	intronic
CAediting_247807	chr2_230763858_+	intronic
CAediting_247808	chr2_230763860_+	intronic
CAediting_247809	chr2_230763889_+	intronic
CAediting_247810	chr2_230763902_+	intronic
CAediting_247811	chr2_230763936_+	intronic
CAediting_247812	chr2_230763940_+	intronic
CAediting_247813	chr2_230763945_+	intronic
CAediting_247814	chr2_230763946_+	intronic
CAediting_247815	chr2_230763969_+	intronic
CAediting_247816	chr2_230763975_+	intronic
CAediting_247817	chr2_230763991_+	intronic
CAediting_247818	chr2_230763995_+	intronic
CAediting_247819	chr2_230764001_+	intronic
CAediting_247820	chr2_230764015_+	intronic
CAediting_247821	chr2_230764071_+	intronic
CAediting_247822	chr2_230764074_+	intronic
CAediting_247823	chr2_230765007_+	intronic
CAediting_247824	chr2_230765128_+	intronic
CAediting_247825	chr2_230765136_+	intronic
CAediting_247826	chr2_230766567_+	intronic
CAediting_247827	chr2_230766622_+	intronic
CAediting_247828	chr2_230766654_+	intronic
CAediting_247829	chr2_230766671_+	intronic
CAediting_247830	chr2_230769707_+	intronic
CAediting_247831	chr2_230769724_+	intronic
CAediting_247832	chr2_230769729_+	intronic
CAediting_247833	chr2_230769755_+	intronic
CAediting_247834	chr2_230769756_+	intronic
CAediting_247835	chr2_230769764_+	intronic
CAediting_247836	chr2_230769783_+	intronic
CAediting_247837	chr2_230769792_+	intronic
CAediting_247838	chr2_230769800_+	intronic
CAediting_247839	chr2_230769801_+	intronic
CAediting_247840	chr2_230769802_+	intronic
CAediting_247841	chr2_230769803_+	intronic
CAediting_247842	chr2_230769878_+	intronic
CAediting_247843	chr2_230769909_+	intronic
CAediting_247844	chr2_230769939_+	intronic
CAediting_247845	chr2_230769941_+	intronic
CAediting_247846	chr2_230772565_+	intronic
CAediting_247847	chr2_230772610_+	intronic
CAediting_247848	chr2_230772667_+	intronic
CAediting_247849	chr2_230772692_+	intronic
CAediting_247850	chr2_230772746_+	intronic
CAediting_247851	chr2_230772747_+	intronic
CAediting_247852	chr2_230780827_+	ncRNA_intronic
CAediting_247853	chr2_230780872_+	ncRNA_intronic
CAediting_247854	chr2_230780900_+	ncRNA_intronic
CAediting_247855	chr2_230780955_+	ncRNA_intronic
CAediting_247856	chr2_230780961_+	ncRNA_intronic
CAediting_247857	chr2_230781002_+	ncRNA_intronic
CAediting_247858	chr2_230781034_+	ncRNA_intronic
CAediting_247859	chr2_230781990_+	ncRNA_intronic
CAediting_247860	chr2_230782134_+	ncRNA_intronic
CAediting_247861	chr2_230783660_+	ncRNA_intronic
CAediting_247862	chr2_230783699_+	ncRNA_intronic
CAediting_247863	chr2_230785734_+	ncRNA_intronic
CAediting_247864	chr2_230785764_+	ncRNA_intronic
CAediting_247865	chr2_230785800_+	ncRNA_intronic
CAediting_247866	chr2_230785812_+	ncRNA_intronic
CAediting_247867	chr2_230785817_+	ncRNA_intronic
CAediting_247868	chr2_230786004_+	ncRNA_intronic
CAediting_247869	chr2_230786017_+	ncRNA_intronic
CAediting_247870	chr2_230786113_+	ncRNA_intronic
CAediting_247871	chr2_230786202_+	ncRNA_intronic
CAediting_247872	chr2_230786233_+	ncRNA_intronic
CAediting_247873	chr2_230786257_+	ncRNA_intronic
CAediting_247874	chr2_230786273_+	ncRNA_intronic
CAediting_247875	chr2_230789961_+	ncRNA_intronic
CAediting_247876	chr2_230790073_+	ncRNA_intronic
CAediting_247877	chr2_230790167_+	ncRNA_intronic
CAediting_247878	chr2_230799899_+	intronic
CAediting_247879	chr2_230799946_+	intronic
CAediting_247880	chr2_230799971_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_247616	chr2_230715726_+	SINE	Alu	AluJb
CAediting_247617	chr2_230715802_+	SINE	Alu	AluJb
CAediting_247618	chr2_230715803_+	SINE	Alu	AluJb
CAediting_247619	chr2_230715830_+	SINE	Alu	AluJb
CAediting_247620	chr2_230715842_+	SINE	Alu	AluJb
CAediting_247621	chr2_230715850_+	SINE	Alu	AluJb
CAediting_247622	chr2_230715866_+	SINE	Alu	AluJb
CAediting_247623	chr2_230715867_+	SINE	Alu	AluJb
CAediting_247624	chr2_230715883_+	SINE	Alu	AluJb
CAediting_247625	chr2_230715889_+	SINE	Alu	AluJb
CAediting_247626	chr2_230715909_+	SINE	Alu	AluJb
CAediting_247627	chr2_230716611_+	SINE	Alu	AluJo
CAediting_247628	chr2_230716820_+	SINE	Alu	AluJo
CAediting_247629	chr2_230716831_+	SINE	Alu	AluJo
CAediting_247630	chr2_230716839_+	SINE	Alu	AluJo
CAediting_247631	chr2_230716843_+	SINE	Alu	AluJo
CAediting_247632	chr2_230716850_+	SINE	Alu	AluJo
CAediting_247633	chr2_230716853_+	SINE	Alu	AluJo
CAediting_247634	chr2_230716896_+	SINE	Alu	AluJo
CAediting_247636	chr2_230720461_+	SINE	Alu	AluSg
CAediting_247637	chr2_230720575_+	SINE	Alu	AluSg
CAediting_247638	chr2_230720619_+	SINE	Alu	AluSg
CAediting_247639	chr2_230720681_+	SINE	Alu	AluSg
CAediting_247640	chr2_230720682_+	SINE	Alu	AluSg
CAediting_247641	chr2_230720694_+	SINE	Alu	AluSg
CAediting_247642	chr2_230721229_+	SINE	Alu	AluSx1
CAediting_247643	chr2_230721230_+	SINE	Alu	AluSx1
CAediting_247644	chr2_230721300_+	SINE	Alu	AluSx1
CAediting_247645	chr2_230721351_+	SINE	Alu	AluSx1
CAediting_247646	chr2_230721380_+	SINE	Alu	AluSx1
CAediting_247647	chr2_230722431_+	SINE	Alu	AluJo
CAediting_247648	chr2_230723989_+	SINE	Alu	AluSz
CAediting_247649	chr2_230724071_+	SINE	Alu	AluSz
CAediting_247650	chr2_230724100_+	SINE	Alu	AluSz
CAediting_247651	chr2_230724118_+	SINE	Alu	AluSz
CAediting_247652	chr2_230724126_+	SINE	Alu	AluSz
CAediting_247653	chr2_230724127_+	SINE	Alu	AluSz
CAediting_247654	chr2_230724136_+	SINE	Alu	AluSz
CAediting_247655	chr2_230724560_+	SINE	Alu	AluSp
CAediting_247656	chr2_230724570_+	SINE	Alu	AluSp
CAediting_247657	chr2_230724587_+	SINE	Alu	AluSp
CAediting_247658	chr2_230724631_+	SINE	Alu	AluSp
CAediting_247659	chr2_230726263_+	SINE	Alu	AluSz6
CAediting_247660	chr2_230727434_+	SINE	Alu	AluJb
CAediting_247661	chr2_230727438_+	SINE	Alu	AluJb
CAediting_247662	chr2_230727564_+	SINE	Alu	AluJb
CAediting_247663	chr2_230727591_+	SINE	Alu	AluJb
CAediting_247664	chr2_230727697_+	SINE	Alu	AluJb
CAediting_247665	chr2_230727961_+	SINE	Alu	AluSx
CAediting_247666	chr2_230728038_+	SINE	Alu	AluSx
CAediting_247667	chr2_230728063_+	SINE	Alu	AluSx
CAediting_247668	chr2_230728159_+	SINE	Alu	AluSx
CAediting_247669	chr2_230728220_+	SINE	Alu	AluSx
CAediting_247670	chr2_230728403_+	SINE	Alu	AluSz
CAediting_247671	chr2_230728404_+	SINE	Alu	AluSz
CAediting_247672	chr2_230728414_+	SINE	Alu	AluSz
CAediting_247673	chr2_230728421_+	SINE	Alu	AluSz
CAediting_247674	chr2_230728427_+	SINE	Alu	AluSz
CAediting_247675	chr2_230728435_+	SINE	Alu	AluSz
CAediting_247676	chr2_230728439_+	SINE	Alu	AluSz
CAediting_247677	chr2_230728449_+	SINE	Alu	AluSz
CAediting_247678	chr2_230728475_+	SINE	Alu	AluSz
CAediting_247679	chr2_230728554_+	SINE	Alu	AluSz
CAediting_247680	chr2_230728710_+	SINE	Alu	AluJr4
CAediting_247681	chr2_230728713_+	SINE	Alu	AluJr4
CAediting_247682	chr2_230728739_+	SINE	Alu	AluJr4
CAediting_247683	chr2_230728743_+	SINE	Alu	AluJr4
CAediting_247684	chr2_230728751_+	SINE	Alu	AluJr4
CAediting_247685	chr2_230728835_+	SINE	Alu	AluJr4
CAediting_247686	chr2_230728848_+	SINE	Alu	AluJr4
CAediting_247687	chr2_230728851_+	SINE	Alu	AluJr4
CAediting_247688	chr2_230728876_+	SINE	Alu	AluJr4
CAediting_247689	chr2_230729595_+	SINE	Alu	AluSq
CAediting_247690	chr2_230729598_+	SINE	Alu	AluSq
CAediting_247691	chr2_230729632_+	SINE	Alu	AluSq
CAediting_247692	chr2_230729633_+	SINE	Alu	AluSq
CAediting_247693	chr2_230730133_+	SINE	Alu	AluJb
CAediting_247694	chr2_230730136_+	SINE	Alu	AluJb
CAediting_247695	chr2_230730149_+	SINE	Alu	AluJb
CAediting_247696	chr2_230730158_+	SINE	Alu	AluJb
CAediting_247697	chr2_230730171_+	SINE	Alu	AluJb
CAediting_247698	chr2_230730177_+	SINE	Alu	AluJb
CAediting_247699	chr2_230730184_+	SINE	Alu	AluJb
CAediting_247700	chr2_230730189_+	SINE	Alu	AluJb
CAediting_247701	chr2_230730203_+	SINE	Alu	AluJb
CAediting_247702	chr2_230730210_+	SINE	Alu	AluJb
CAediting_247703	chr2_230730221_+	SINE	Alu	AluJb
CAediting_247704	chr2_230730238_+	SINE	Alu	AluJb
CAediting_247705	chr2_230730256_+	SINE	Alu	AluJb
CAediting_247706	chr2_230730258_+	SINE	Alu	AluJb
CAediting_247707	chr2_230730627_+	SINE	Alu	AluSq
CAediting_247708	chr2_230731561_+	SINE	Alu	AluJr4
CAediting_247709	chr2_230731572_+	SINE	Alu	AluJr4
CAediting_247710	chr2_230731577_+	SINE	Alu	AluJr4
CAediting_247711	chr2_230731606_+	SINE	Alu	AluJr4
CAediting_247712	chr2_230731636_+	SINE	Alu	AluJr4
CAediting_247713	chr2_230731642_+	SINE	Alu	AluJr4
CAediting_247714	chr2_230731713_+	SINE	Alu	AluJr4
CAediting_247715	chr2_230731747_+	SINE	Alu	AluJr4
CAediting_247716	chr2_230731757_+	SINE	Alu	AluJr4
CAediting_247717	chr2_230731758_+	SINE	Alu	AluJr4
CAediting_247718	chr2_230735296_+	SINE	Alu	AluSz
CAediting_247719	chr2_230744436_+	SINE	Alu	AluSg
CAediting_247720	chr2_230745807_+	SINE	Alu	AluSq
CAediting_247721	chr2_230745810_+	SINE	Alu	AluSq
CAediting_247722	chr2_230745837_+	SINE	Alu	AluSq
CAediting_247723	chr2_230747084_+	SINE	Alu	AluSx
CAediting_247724	chr2_230747098_+	SINE	Alu	AluSx
CAediting_247725	chr2_230747144_+	SINE	Alu	AluSx
CAediting_247726	chr2_230747145_+	SINE	Alu	AluSx
CAediting_247727	chr2_230747160_+	SINE	Alu	AluSx
CAediting_247728	chr2_230748550_+	SINE	Alu	AluSz6
CAediting_247729	chr2_230748551_+	SINE	Alu	AluSz6
CAediting_247730	chr2_230748572_+	SINE	Alu	AluSz6
CAediting_247731	chr2_230748591_+	SINE	Alu	AluSz6
CAediting_247732	chr2_230748619_+	SINE	Alu	AluSz6
CAediting_247733	chr2_230748630_+	SINE	Alu	AluSz6
CAediting_247734	chr2_230748635_+	SINE	Alu	AluSz6
CAediting_247735	chr2_230748644_+	SINE	Alu	AluSz6
CAediting_247736	chr2_230748646_+	SINE	Alu	AluSz6
CAediting_247737	chr2_230748648_+	SINE	Alu	AluSz6
CAediting_247738	chr2_230748655_+	SINE	Alu	AluSz6
CAediting_247739	chr2_230748656_+	SINE	Alu	AluSz6
CAediting_247740	chr2_230748659_+	SINE	Alu	AluSz6
CAediting_247741	chr2_230748666_+	SINE	Alu	AluSz6
CAediting_247742	chr2_230748675_+	SINE	Alu	AluSz6
CAediting_247743	chr2_230748685_+	SINE	Alu	AluSz6
CAediting_247744	chr2_230748727_+	SINE	Alu	AluSz6
CAediting_247745	chr2_230748739_+	SINE	Alu	AluSz6
CAediting_247746	chr2_230753477_+	SINE	Alu	AluSg
CAediting_247747	chr2_230753493_+	SINE	Alu	AluSg
CAediting_247748	chr2_230753499_+	SINE	Alu	AluSg
CAediting_247749	chr2_230753530_+	SINE	Alu	AluSg
CAediting_247750	chr2_230753543_+	SINE	Alu	AluSg
CAediting_247751	chr2_230753551_+	SINE	Alu	AluSg
CAediting_247752	chr2_230753554_+	SINE	Alu	AluSg
CAediting_247753	chr2_230753567_+	SINE	Alu	AluSg
CAediting_247754	chr2_230753594_+	SINE	Alu	AluSg
CAediting_247755	chr2_230753600_+	SINE	Alu	AluSg
CAediting_247756	chr2_230753604_+	SINE	Alu	AluSg
CAediting_247757	chr2_230753616_+	SINE	Alu	AluSg
CAediting_247758	chr2_230753626_+	SINE	Alu	AluSg
CAediting_247759	chr2_230753632_+	SINE	Alu	AluSg
CAediting_247760	chr2_230753649_+	SINE	Alu	AluSg
CAediting_247761	chr2_230753669_+	SINE	Alu	AluSg
CAediting_247762	chr2_230753688_+	SINE	Alu	AluSg
CAediting_247763	chr2_230753689_+	SINE	Alu	AluSg
CAediting_247764	chr2_230753694_+	SINE	Alu	AluSg
CAediting_247765	chr2_230753701_+	SINE	Alu	AluSg
CAediting_247766	chr2_230754562_+	SINE	Alu	AluSx
CAediting_247767	chr2_230754580_+	SINE	Alu	AluSx
CAediting_247768	chr2_230754588_+	SINE	Alu	AluSx
CAediting_247769	chr2_230754593_+	SINE	Alu	AluSx
CAediting_247770	chr2_230754612_+	SINE	Alu	AluSx
CAediting_247771	chr2_230754648_+	SINE	Alu	AluSx
CAediting_247772	chr2_230754660_+	SINE	Alu	AluSx
CAediting_247773	chr2_230754664_+	SINE	Alu	AluSx
CAediting_247774	chr2_230754708_+	SINE	Alu	AluSx
CAediting_247775	chr2_230754728_+	SINE	Alu	AluSx
CAediting_247776	chr2_230754739_+	SINE	Alu	AluSx
CAediting_247777	chr2_230754782_+	SINE	Alu	AluSx
CAediting_247778	chr2_230754799_+	SINE	Alu	AluSx
CAediting_247779	chr2_230757203_+	SINE	Alu	AluJr
CAediting_247780	chr2_230757237_+	SINE	Alu	AluJr
CAediting_247781	chr2_230757268_+	SINE	Alu	AluJr
CAediting_247782	chr2_230757305_+	SINE	Alu	AluJr
CAediting_247783	chr2_230757371_+	SINE	Alu	AluJr
CAediting_247784	chr2_230760432_+	SINE	Alu	AluJr
CAediting_247785	chr2_230760486_+	SINE	Alu	AluJr
CAediting_247786	chr2_230761972_+	SINE	Alu	AluSx
CAediting_247787	chr2_230761977_+	SINE	Alu	AluSx
CAediting_247788	chr2_230761988_+	SINE	Alu	AluSx
CAediting_247789	chr2_230761994_+	SINE	Alu	AluSx
CAediting_247790	chr2_230762034_+	SINE	Alu	AluSx
CAediting_247791	chr2_230762037_+	SINE	Alu	AluSx
CAediting_247792	chr2_230762047_+	SINE	Alu	AluSx
CAediting_247793	chr2_230762049_+	SINE	Alu	AluSx
CAediting_247794	chr2_230762057_+	SINE	Alu	AluSx
CAediting_247795	chr2_230762060_+	SINE	Alu	AluSx
CAediting_247796	chr2_230762063_+	SINE	Alu	AluSx
CAediting_247797	chr2_230762073_+	SINE	Alu	AluSx
CAediting_247798	chr2_230762160_+	SINE	Alu	AluSx
CAediting_247799	chr2_230762169_+	SINE	Alu	AluSx
CAediting_247800	chr2_230762182_+	SINE	Alu	AluSx
CAediting_247801	chr2_230763445_+	SINE	Alu	AluSz6
CAediting_247802	chr2_230763449_+	SINE	Alu	AluSz6
CAediting_247803	chr2_230763461_+	SINE	Alu	AluSz6
CAediting_247804	chr2_230763502_+	SINE	Alu	AluSz6
CAediting_247805	chr2_230763505_+	SINE	Alu	AluSz6
CAediting_247806	chr2_230763513_+	SINE	Alu	AluSz6
CAediting_247807	chr2_230763858_+	SINE	Alu	AluSz
CAediting_247808	chr2_230763860_+	SINE	Alu	AluSz
CAediting_247809	chr2_230763889_+	SINE	Alu	AluSz
CAediting_247810	chr2_230763902_+	SINE	Alu	AluSz
CAediting_247811	chr2_230763936_+	SINE	Alu	AluSz
CAediting_247812	chr2_230763940_+	SINE	Alu	AluSz
CAediting_247813	chr2_230763945_+	SINE	Alu	AluSz
CAediting_247814	chr2_230763946_+	SINE	Alu	AluSz
CAediting_247815	chr2_230763969_+	SINE	Alu	AluSz
CAediting_247816	chr2_230763975_+	SINE	Alu	AluSz
CAediting_247817	chr2_230763991_+	SINE	Alu	AluSz
CAediting_247818	chr2_230763995_+	SINE	Alu	AluSz
CAediting_247819	chr2_230764001_+	SINE	Alu	AluSz
CAediting_247820	chr2_230764015_+	SINE	Alu	AluSz
CAediting_247821	chr2_230764071_+	SINE	Alu	AluSz
CAediting_247822	chr2_230764074_+	SINE	Alu	AluSz
CAediting_247823	chr2_230765007_+	SINE	Alu	AluSc
CAediting_247824	chr2_230765128_+	SINE	Alu	AluSc
CAediting_247825	chr2_230765136_+	SINE	Alu	AluSc
CAediting_247826	chr2_230766567_+	SINE	Alu	AluJb
CAediting_247827	chr2_230766622_+	SINE	Alu	AluJb
CAediting_247828	chr2_230766654_+	SINE	Alu	AluJb
CAediting_247829	chr2_230766671_+	SINE	Alu	AluJb
CAediting_247830	chr2_230769707_+	SINE	Alu	AluSx1
CAediting_247831	chr2_230769724_+	SINE	Alu	AluSx1
CAediting_247832	chr2_230769729_+	SINE	Alu	AluSx1
CAediting_247833	chr2_230769755_+	SINE	Alu	AluSx1
CAediting_247834	chr2_230769756_+	SINE	Alu	AluSx1
CAediting_247835	chr2_230769764_+	SINE	Alu	AluSx1
CAediting_247836	chr2_230769783_+	SINE	Alu	AluSx1
CAediting_247837	chr2_230769792_+	SINE	Alu	AluSx1
CAediting_247838	chr2_230769800_+	SINE	Alu	AluSx1
CAediting_247839	chr2_230769801_+	SINE	Alu	AluSx1
CAediting_247840	chr2_230769802_+	SINE	Alu	AluSx1
CAediting_247841	chr2_230769803_+	SINE	Alu	AluSx1
CAediting_247842	chr2_230769878_+	SINE	Alu	AluSx1
CAediting_247843	chr2_230769909_+	SINE	Alu	AluSx1
CAediting_247844	chr2_230769939_+	SINE	Alu	AluSx1
CAediting_247845	chr2_230769941_+	SINE	Alu	AluSx1
CAediting_247846	chr2_230772565_+	SINE	Alu	AluY
CAediting_247847	chr2_230772610_+	SINE	Alu	AluY
CAediting_247848	chr2_230772667_+	SINE	Alu	AluY
CAediting_247849	chr2_230772692_+	SINE	Alu	AluY
CAediting_247850	chr2_230772746_+	SINE	Alu	AluY
CAediting_247851	chr2_230772747_+	SINE	Alu	AluY
CAediting_247852	chr2_230780827_+	SINE	Alu	AluJb
CAediting_247853	chr2_230780872_+	SINE	Alu	AluJb
CAediting_247854	chr2_230780900_+	SINE	Alu	AluJb
CAediting_247855	chr2_230780955_+	SINE	Alu	AluJb
CAediting_247856	chr2_230780961_+	SINE	Alu	AluJb
CAediting_247857	chr2_230781002_+	SINE	Alu	AluJb
CAediting_247858	chr2_230781034_+	SINE	Alu	AluJb
CAediting_247859	chr2_230781990_+	SINE	Alu	AluSx
CAediting_247860	chr2_230782134_+	SINE	Alu	AluSx
CAediting_247861	chr2_230783660_+	SINE	Alu	AluJb
CAediting_247862	chr2_230783699_+	SINE	Alu	AluJb
CAediting_247863	chr2_230785734_+	SINE	Alu	AluJb
CAediting_247864	chr2_230785764_+	SINE	Alu	AluJb
CAediting_247865	chr2_230785800_+	SINE	Alu	AluJb
CAediting_247866	chr2_230785812_+	SINE	Alu	AluJb
CAediting_247867	chr2_230785817_+	SINE	Alu	AluJb
CAediting_247868	chr2_230786004_+	SINE	Alu	AluY
CAediting_247869	chr2_230786017_+	SINE	Alu	AluY
CAediting_247870	chr2_230786113_+	SINE	Alu	AluY
CAediting_247871	chr2_230786202_+	SINE	Alu	AluJb
CAediting_247872	chr2_230786233_+	SINE	Alu	AluJb
CAediting_247873	chr2_230786257_+	SINE	Alu	AluJb
CAediting_247874	chr2_230786273_+	SINE	Alu	AluJb
CAediting_247875	chr2_230789961_+	SINE	Alu	AluJb
CAediting_247876	chr2_230790073_+	SINE	Alu	AluJb
CAediting_247877	chr2_230790167_+	SINE	Alu	AluJb
CAediting_247878	chr2_230799899_+	SINE	Alu	AluSp
CAediting_247879	chr2_230799946_+	SINE	Alu	AluSp
CAediting_247880	chr2_230799971_+	SINE	Alu	AluSp

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RNA A-to-I editing events in the alternative splicing sites for CAB39

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000135932.9.CAB39.

Correlation between RNA A-to-I editing and PSI for ENSG00000135932.9.CAB39.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CAB39

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CAB39

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CAB39

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000135932.9	ENST00000258418	hsa-miR-200b-3p	230818736	230818742	7mer-m8	230818722	230818743	140	-11.31
CAediting_393	chr1_1167164_+	ENSG00000135932.9	ENST00000258418	hsa-miR-200b-3p	230819654	230819661	8mer-1a	230819642	230819661	152	-13.33
CAediting_393	chr1_1167164_+	ENSG00000135932.9	ENST00000409788	hsa-miR-200b-3p	230818736	230818742	7mer-m8	230818722	230818743	140	-11.31
CAediting_393	chr1_1167164_+	ENSG00000135932.9	ENST00000614925	hsa-miR-200b-3p	230818736	230818742	7mer-m8	230818722	230818743	140	-11.31
CAediting_1229415	chr17_67471547_+	ENSG00000135932.9	ENST00000258418	hsa-miR-548aa	230820533	230820539	7mer-m8	230820517	230820540	149	-14.18

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000135932.9	ENST00000258418	hsa-miR-200b-3p	230820039	230820045	7mer-m8	230820025	230820046	140	-8.53
CAediting_1306324	chr19_13836464_-	ENSG00000135932.9	ENST00000258418	hsa-miR-27a-3p	230820080	230820086	7mer-m8	230820067	230820087	155	-15.79
CAediting_1306323	chr19_13836462_-	ENSG00000135932.9	ENST00000258418	hsa-miR-27a-3p	230820080	230820086	7mer-m8	230820067	230820087	155	-15.79
CAediting_688080	chr9_63819626_+	ENSG00000135932.9	ENST00000258418	hsa-miR-4477b	230820019	230820025	7mer-m8	230820006	230820026	146	-9.95
CAediting_396018	chr5_1062918_-	ENSG00000135932.9	ENST00000258418	hsa-miR-4635	230819457	230819463	7mer-m8	230819445	230819464	146	-15.02
CAediting_1229413	chr17_67471544_+	ENSG00000135932.9	ENST00000258418	hsa-miR-548aa	230820874	230820880	7mer-m8	230820857	230820881	150	-12.35
CAediting_1229415	chr17_67471547_+	ENSG00000135932.9	ENST00000258418	hsa-miR-548aa	230820874	230820880	7mer-m8	230820857	230820881	150	-12.35

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CAB39

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for CAB39

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for CAB39

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for CAB39

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for CAB39

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CAB39

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene