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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: HSD17B7 (CAeditome ID:51478) |
Gene summary for HSD17B7 |
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Gene information | Gene symbol | HSD17B7 | Gene ID | 51478 |
Gene name | hydroxysteroid 17-beta dehydrogenase 7 | |
Synonyms | PRAP|SDR37C1 | |
Cytomap | 1q23.3 | |
Type of gene | protein-coding | |
Description | 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 717 beta-hydroxysteroid dehydrogenase type VII17-beta-HSD 717-beta-hydroxysteroid dehydrogenase 717beta hydroxysteroid dehydrogenase3-keto-steroid reductasedihydrotestosterone oxidoreduct | |
Modification date | 20210518 | |
UniProtAcc | P56937 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
HSD17B7 | GO:0000253 | 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 | 12829805 |
HSD17B7 | GO:0004303 | 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 | 12732193 |
HSD17B7 | GO:0004303 | 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 | 19772289 |
HSD17B7 | GO:0047024 | 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 | 12732193 |
HSD17B7 | GO:0047024 | 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 | 19772289 |
HSD17B7 | GO:0006695 | 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 | 12829805 |
HSD17B7 | GO:0006703 | 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 | 12732193 |
HSD17B7 | GO:0008209 | 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 | 12732193 |
HSD17B7 | GO:0005789 | 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 | 12829805 |
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RNA A-to-I events for HSD17B7 |
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CAediting_118089(162798781, +), CAediting_118090(162798825, +), CAediting_118091(162798847, +), CAediting_118092(162798923, +), CAediting_118093(162798929, +), CAediting_118094(162801238, +), CAediting_118095(162812419, +), CAediting_118096(162812420, +), CAediting_118097(162812441, +), CAediting_118098(162812446, +), CAediting_118099(162812452, +), CAediting_118100(162812485, +), CAediting_118101(162812493, +), CAediting_118102(162812518, +), CAediting_118103(162812525, +), CAediting_118104(162812529, +), CAediting_118105(162812577, +), |
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RNA editing positional annotations for HSD17B7 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_118089 | chr1_162798781_+ | ncRNA_exonic |
CAediting_118090 | chr1_162798825_+ | ncRNA_exonic |
CAediting_118091 | chr1_162798847_+ | ncRNA_exonic |
CAediting_118092 | chr1_162798923_+ | ncRNA_exonic |
CAediting_118093 | chr1_162798929_+ | ncRNA_exonic |
CAediting_118094 | chr1_162801238_+ | ncRNA_intronic |
CAediting_118095 | chr1_162812419_+ | exonic |
CAediting_118096 | chr1_162812420_+ | exonic |
CAediting_118097 | chr1_162812441_+ | ncRNA_exonic |
CAediting_118098 | chr1_162812446_+ | ncRNA_exonic |
CAediting_118099 | chr1_162812452_+ | ncRNA_exonic |
CAediting_118100 | chr1_162812485_+ | ncRNA_exonic |
CAediting_118101 | chr1_162812493_+ | ncRNA_exonic |
CAediting_118102 | chr1_162812518_+ | ncRNA_exonic |
CAediting_118103 | chr1_162812525_+ | ncRNA_exonic |
CAediting_118104 | chr1_162812529_+ | ncRNA_exonic |
CAediting_118105 | chr1_162812577_+ | ncRNA_exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_118089 | chr1_162798781_+ | SINE | Alu | AluSp |
CAediting_118090 | chr1_162798825_+ | SINE | Alu | AluSp |
CAediting_118091 | chr1_162798847_+ | SINE | Alu | AluSp |
CAediting_118092 | chr1_162798923_+ | SINE | Alu | AluSp |
CAediting_118093 | chr1_162798929_+ | SINE | Alu | AluSp |
CAediting_118094 | chr1_162801238_+ | SINE | Alu | AluSz6 |
CAediting_118095 | chr1_162812419_+ | SINE | Alu | AluJb |
CAediting_118096 | chr1_162812420_+ | SINE | Alu | AluJb |
CAediting_118097 | chr1_162812441_+ | SINE | Alu | AluJb |
CAediting_118098 | chr1_162812446_+ | SINE | Alu | AluJb |
CAediting_118099 | chr1_162812452_+ | SINE | Alu | AluJb |
CAediting_118100 | chr1_162812485_+ | SINE | Alu | AluJb |
CAediting_118101 | chr1_162812493_+ | SINE | Alu | AluJb |
CAediting_118102 | chr1_162812518_+ | SINE | Alu | AluJb |
CAediting_118103 | chr1_162812525_+ | SINE | Alu | AluJb |
CAediting_118104 | chr1_162812529_+ | SINE | Alu | AluJb |
CAediting_118105 | chr1_162812577_+ | SINE | Alu | AluJb |
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RNA A-to-I editing events in the alternative splicing sites for HSD17B7 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for HSD17B7 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for HSD17B7 |
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The effects of the RNA editing to the miRNA binding sites for HSD17B7 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_118096 | chr1_162812420_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-625-3p | 162812414 | 162812420 | 7mer-m8 | 162812400 | 162812421 | 144.00 | -9.93 |
CAediting_118099 | chr1_162812452_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-7973 | 162812449 | 162812455 | 7mer-m8 | 162812437 | 162812456 | 145.00 | -15.58 |
CAediting_118099 | chr1_162812452_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-7973 | 162812449 | 162812455 | 7mer-m8 | 162812437 | 162812456 | 145.00 | -15.58 |
CAediting_118099 | chr1_162812452_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-7973 | 162812449 | 162812455 | 7mer-m8 | 162812437 | 162812456 | 145.00 | -15.58 |
CAediting_118099 | chr1_162812452_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-7973 | 162812449 | 162812455 | 7mer-m8 | 162812437 | 162812456 | 145.00 | -15.58 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-4716-5p | 162812487 | 162812493 | 7mer-m8 | 162812473 | 162812494 | 150.00 | -13.72 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-6511a-3p | 162812491 | 162812497 | 7mer-m8 | 162812476 | 162812498 | 151.00 | -18.12 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-6511a-3p | 162812491 | 162812497 | 7mer-m8 | 162812476 | 162812498 | 151.00 | -18.12 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-6511a-3p | 162812491 | 162812497 | 7mer-m8 | 162812476 | 162812498 | 151.00 | -18.12 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-6511a-3p | 162812491 | 162812497 | 7mer-m8 | 162812476 | 162812498 | 151.00 | -18.12 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-6511b-3p | 162812491 | 162812497 | 7mer-m8 | 162812475 | 162812498 | 148.00 | -16.58 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-6511b-3p | 162812491 | 162812497 | 7mer-m8 | 162812475 | 162812498 | 148.00 | -16.58 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-4716-5p | 162812487 | 162812493 | 7mer-m8 | 162812473 | 162812494 | 150.00 | -13.72 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-6511a-3p | 162812491 | 162812497 | 7mer-m8 | 162812476 | 162812498 | 151.00 | -18.12 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-6511a-3p | 162812491 | 162812497 | 7mer-m8 | 162812476 | 162812498 | 151.00 | -18.12 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-6511a-3p | 162812491 | 162812497 | 7mer-m8 | 162812476 | 162812498 | 151.00 | -18.12 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-6511a-3p | 162812491 | 162812497 | 7mer-m8 | 162812476 | 162812498 | 151.00 | -18.12 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-6511b-3p | 162812491 | 162812497 | 7mer-m8 | 162812475 | 162812498 | 148.00 | -16.58 |
CAediting_118101 | chr1_162812493_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-6511b-3p | 162812491 | 162812497 | 7mer-m8 | 162812475 | 162812498 | 148.00 | -16.58 |
CAediting_118095 | chr1_162812419_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-15b-3p | 162812416 | 162812422 | 7mer-m8 | 162812399 | 162812423 | 150.00 | -12.57 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_118099 | chr1_162812452_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-1245a | 162812450 | 162812456 | 7mer-m8 | 162812437 | 162812457 | 149 | -18.39 |
CAediting_118098 | chr1_162812446_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-5001-3p | 162812441 | 162812448 | 8mer-1a | 162812428 | 162812448 | 148 | -19.7 |
CAediting_118099 | chr1_162812452_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-501-5p | 162812447 | 162812452 | 6mer | 162812432 | 162812453 | 140 | -14.97 |
CAediting_118099 | chr1_162812452_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-6868-3p | 162812445 | 162812451 | 7mer-m8 | 162812430 | 162812452 | 150 | -18.85 |
CAediting_118097 | chr1_162812441_+ | ENSG00000132196.12 | ENST00000254521 | hsa-miR-6878-3p | 162812434 | 162812441 | 8mer-1a | 162812421 | 162812441 | 142 | -14.61 |
CAediting_118099 | chr1_162812452_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-1245a | 162812450 | 162812456 | 7mer-m8 | 162812437 | 162812457 | 149 | -18.39 |
CAediting_118098 | chr1_162812446_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-5001-3p | 162812441 | 162812448 | 8mer-1a | 162812428 | 162812448 | 148 | -19.7 |
CAediting_118099 | chr1_162812452_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-501-5p | 162812447 | 162812452 | 6mer | 162812432 | 162812453 | 140 | -14.97 |
CAediting_118099 | chr1_162812452_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-6868-3p | 162812445 | 162812451 | 7mer-m8 | 162812430 | 162812452 | 150 | -18.85 |
CAediting_118097 | chr1_162812441_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-6878-3p | 162812434 | 162812441 | 8mer-1a | 162812421 | 162812441 | 142 | -14.61 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1351755 | chr19_40282625_- | ENSG00000132196.12 | ENST00000367915 | hsa-miR-641 | 162793007 | 162793013 | 7mer-1a | 162792993 | 162793013 | 149 | -23.53 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000132196.12 | ENST00000470195 | hsa-miR-548aa | 162805458 | 162805464 | 7mer-m8 | 162805441 | 162805465 | 140 | -10.58 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for HSD17B7 |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_118095 | ENST00000254521.6 | chr1_162812419_+ | -362.30 | -358.10 | -368.90 |
CAediting_118096 | ENST00000254521.6 | chr1_162812420_+ | -360.30 | -358.10 | -368.90 |
CAediting_118097 | ENST00000254521.6 | chr1_162812441_+ | -358.10 | -358.10 | -368.90 |
CAediting_118098 | ENST00000254521.6 | chr1_162812446_+ | -357.40 | -358.10 | -368.90 |
CAediting_118099 | ENST00000254521.6 | chr1_162812452_+ | -362.20 | -358.10 | -368.90 |
CAediting_118100 | ENST00000254521.6 | chr1_162812485_+ | -360.20 | -358.10 | -368.90 |
CAediting_118101 | ENST00000254521.6 | chr1_162812493_+ | -361.40 | -358.10 | -368.90 |
CAediting_118102 | ENST00000254521.6 | chr1_162812518_+ | -361.00 | -358.10 | -368.90 |
CAediting_118103 | ENST00000254521.6 | chr1_162812525_+ | -358.10 | -358.10 | -368.90 |
CAediting_118104 | ENST00000254521.6 | chr1_162812529_+ | -358.10 | -358.10 | -368.90 |
CAediting_118089 | ENST00000485405.4 | chr1_162798781_+ | -789.90 | -789.50 | -804.80 |
CAediting_118090 | ENST00000485405.4 | chr1_162798825_+ | -789.50 | -789.50 | -804.80 |
CAediting_118091 | ENST00000485405.4 | chr1_162798847_+ | -791.10 | -789.50 | -804.80 |
CAediting_118092 | ENST00000485405.4 | chr1_162798923_+ | -791.90 | -789.50 | -804.80 |
CAediting_118093 | ENST00000485405.4 | chr1_162798929_+ | -790.10 | -789.50 | -804.80 |
CAediting_118095 | ENST00000485405.4 | chr1_162812419_+ | -793.00 | -789.50 | -804.80 |
CAediting_118096 | ENST00000485405.4 | chr1_162812420_+ | -789.50 | -789.50 | -804.80 |
CAediting_118097 | ENST00000485405.4 | chr1_162812441_+ | -789.90 | -789.50 | -804.80 |
CAediting_118098 | ENST00000485405.4 | chr1_162812446_+ | -788.80 | -789.50 | -804.80 |
CAediting_118099 | ENST00000485405.4 | chr1_162812452_+ | -794.30 | -789.50 | -804.80 |
CAediting_118100 | ENST00000485405.4 | chr1_162812485_+ | -791.40 | -789.50 | -804.80 |
CAediting_118101 | ENST00000485405.4 | chr1_162812493_+ | -792.80 | -789.50 | -804.80 |
CAediting_118102 | ENST00000485405.4 | chr1_162812518_+ | -789.00 | -789.50 | -804.80 |
CAediting_118103 | ENST00000485405.4 | chr1_162812525_+ | -789.90 | -789.50 | -804.80 |
CAediting_118104 | ENST00000485405.4 | chr1_162812529_+ | -789.50 | -789.50 | -804.80 |
CAediting_118105 | ENST00000485405.4 | chr1_162812577_+ | -789.40 | -789.50 | -804.80 |
CAediting_118095 | ENST00000470195.2 | chr1_162812419_+ | -144.40 | -144.30 | -156.60 |
CAediting_118096 | ENST00000470195.2 | chr1_162812420_+ | -144.70 | -144.30 | -156.60 |
CAediting_118097 | ENST00000470195.2 | chr1_162812441_+ | -147.10 | -144.30 | -156.60 |
CAediting_118098 | ENST00000470195.2 | chr1_162812446_+ | -144.70 | -144.30 | -156.60 |
CAediting_118099 | ENST00000470195.2 | chr1_162812452_+ | -149.50 | -144.30 | -156.60 |
CAediting_118100 | ENST00000470195.2 | chr1_162812485_+ | -144.80 | -144.30 | -156.60 |
CAediting_118101 | ENST00000470195.2 | chr1_162812493_+ | -145.60 | -144.30 | -156.60 |
CAediting_118102 | ENST00000470195.2 | chr1_162812518_+ | -145.10 | -144.30 | -156.60 |
CAediting_118103 | ENST00000470195.2 | chr1_162812525_+ | -144.30 | -144.30 | -156.60 |
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Relation with ADAR for HSD17B7 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for HSD17B7 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for HSD17B7 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for HSD17B7 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
HSD17B7 | P56937 | DB00157 | NADH | 3-keto-steroid reductase | SmallMoleculeDrug | approved|nutraceutical |
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RelatedDiseases for HSD17B7 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |