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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: BIN2 (CAeditome ID:51411)

Gene summary for BIN2

check button Gene summary
Gene informationGene symbol

BIN2

Gene ID

51411

Gene namebridging integrator 2
SynonymsBRAP-1
Cytomap

12q13.13

Type of geneprotein-coding
Descriptionbridging integrator 2breast cancer associated protein BRAP1breast cancer-associated protein 1
Modification date20210518
UniProtAcc

Q9UBW5

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
BIN2

GO:0001891

Bridging integrator 2

23285027

BIN2

GO:0005543

Bridging integrator 2

23285027

BIN2

GO:0097320

Bridging integrator 2

23285027

BIN2

GO:0002102

Bridging integrator 2

23285027


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RNA A-to-I events for BIN2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000110934.9

check button RNA A-to-I editing events in Cancer.
CAediting_891277(51281809, -), CAediting_891278(51281833, -), CAediting_891279(51282030, -), CAediting_891280(51285323, -), CAediting_891281(51285333, -), CAediting_891282(51285336, -), CAediting_891283(51285345, -), CAediting_891284(51285362, -), CAediting_891285(51285363, -), CAediting_891286(51285394, -), CAediting_891287(51285440, -), CAediting_891288(51285443, -), CAediting_891289(51285448, -), CAediting_891290(51285455, -), CAediting_891291(51285620, -), CAediting_891292(51285623, -), CAediting_891293(51285624, -), CAediting_891294(51285659, -), CAediting_891295(51285721, -), CAediting_891296(51285762, -), CAediting_891297(51285884, -), CAediting_891298(51285885, -), CAediting_891299(51286902, -), CAediting_891300(51286908, -), CAediting_891301(51287213, -), CAediting_891302(51288887, -), CAediting_891303(51289737, -), CAediting_891304(51289798, -), CAediting_891305(51290401, -), CAediting_891306(51290402, -), CAediting_891307(51291417, -), CAediting_891308(51291517, -), CAediting_891309(51294962, -), CAediting_891310(51294963, -), CAediting_891311(51294968, -), CAediting_891312(51294985, -), CAediting_891313(51294995, -), CAediting_891314(51294998, -), CAediting_891315(51295005, -), CAediting_891316(51295030, -), CAediting_891317(51295035, -), CAediting_891318(51295044, -), CAediting_891319(51295047, -), CAediting_891320(51295057, -), CAediting_891321(51295061, -), CAediting_891322(51295071, -), CAediting_891323(51295088, -), CAediting_891324(51295089, -), CAediting_891325(51295097, -), CAediting_891326(51295100, -), CAediting_891327(51295104, -), CAediting_891328(51295105, -), CAediting_891329(51295107, -), CAediting_891330(51295111, -), CAediting_891331(51295112, -), CAediting_891332(51295114, -), CAediting_891333(51295122, -), CAediting_891334(51295123, -), CAediting_891335(51295127, -), CAediting_891336(51295144, -), CAediting_891337(51295148, -), CAediting_891338(51295149, -), CAediting_891339(51295161, -), CAediting_891340(51295162, -), CAediting_891341(51295163, -), CAediting_891342(51295191, -), CAediting_891343(51295201, -), CAediting_891344(51295209, -), CAediting_891345(51295212, -), CAediting_891346(51295217, -), CAediting_891347(51295218, -), CAediting_891348(51295241, -), CAediting_891349(51298825, -), CAediting_891350(51298945, -), CAediting_891351(51299924, -), CAediting_891352(51299976, -), CAediting_891353(51299977, -), CAediting_891354(51300008, -), CAediting_891355(51300031, -), CAediting_891356(51300075, -), CAediting_891357(51301074, -), CAediting_891358(51301106, -), CAediting_891359(51301594, -), CAediting_891360(51301789, -), CAediting_891361(51304062, -), CAediting_891362(51304123, -), CAediting_891363(51304145, -), CAediting_891364(51304150, -), CAediting_891365(51304169, -), CAediting_891366(51304228, -), CAediting_891367(51305902, -), CAediting_891368(51305910, -), CAediting_891369(51305926, -), CAediting_891370(51305969, -), CAediting_891371(51305975, -), CAediting_891372(51306381, -), CAediting_891373(51306382, -), CAediting_891374(51306383, -), CAediting_891375(51306487, -), CAediting_891376(51309217, -), CAediting_891377(51309237, -), CAediting_891378(51310887, -), CAediting_891379(51310955, -), CAediting_891380(51311284, -), CAediting_891381(51311518, -), CAediting_891382(51311531, -), CAediting_891383(51313070, -), CAediting_891384(51313441, -), CAediting_891385(51313471, -), CAediting_891386(51313544, -), CAediting_891387(51313568, -), CAediting_891388(51313643, -), CAediting_891389(51313651, -), CAediting_891390(51314555, -), CAediting_891391(51314617, -), CAediting_891392(51315059, -), CAediting_891393(51318309, -), CAediting_891394(51318347, -), CAediting_891395(51318399, -), CAediting_891396(51318400, -), CAediting_891397(51319977, -), CAediting_891398(51322507, -),

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RNA editing positional annotations for BIN2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_891277chr12_51281809_-ncRNA_intronic
CAediting_891278chr12_51281833_-ncRNA_intronic
CAediting_891279chr12_51282030_-ncRNA_intronic
CAediting_891280chr12_51285323_-ncRNA_intronic
CAediting_891281chr12_51285333_-ncRNA_intronic
CAediting_891282chr12_51285336_-ncRNA_intronic
CAediting_891283chr12_51285345_-ncRNA_intronic
CAediting_891284chr12_51285362_-ncRNA_intronic
CAediting_891285chr12_51285363_-ncRNA_intronic
CAediting_891286chr12_51285394_-ncRNA_intronic
CAediting_891287chr12_51285440_-ncRNA_intronic
CAediting_891288chr12_51285443_-ncRNA_intronic
CAediting_891289chr12_51285448_-ncRNA_intronic
CAediting_891290chr12_51285455_-ncRNA_intronic
CAediting_891291chr12_51285620_-ncRNA_intronic
CAediting_891292chr12_51285623_-ncRNA_intronic
CAediting_891293chr12_51285624_-ncRNA_intronic
CAediting_891294chr12_51285659_-ncRNA_intronic
CAediting_891295chr12_51285721_-ncRNA_intronic
CAediting_891296chr12_51285762_-ncRNA_intronic
CAediting_891297chr12_51285884_-ncRNA_intronic
CAediting_891298chr12_51285885_-ncRNA_intronic
CAediting_891299chr12_51286902_-ncRNA_intronic
CAediting_891300chr12_51286908_-ncRNA_intronic
CAediting_891301chr12_51287213_-ncRNA_intronic
CAediting_891302chr12_51288887_-ncRNA_intronic
CAediting_891303chr12_51289737_-ncRNA_intronic
CAediting_891304chr12_51289798_-ncRNA_intronic
CAediting_891305chr12_51290401_-ncRNA_intronic
CAediting_891306chr12_51290402_-ncRNA_intronic
CAediting_891307chr12_51291417_-ncRNA_intronic
CAediting_891308chr12_51291517_-ncRNA_intronic
CAediting_891309chr12_51294962_-ncRNA_intronic
CAediting_891310chr12_51294963_-ncRNA_intronic
CAediting_891311chr12_51294968_-ncRNA_intronic
CAediting_891312chr12_51294985_-ncRNA_intronic
CAediting_891313chr12_51294995_-ncRNA_intronic
CAediting_891314chr12_51294998_-ncRNA_intronic
CAediting_891315chr12_51295005_-ncRNA_intronic
CAediting_891316chr12_51295030_-ncRNA_intronic
CAediting_891317chr12_51295035_-ncRNA_intronic
CAediting_891318chr12_51295044_-ncRNA_intronic
CAediting_891319chr12_51295047_-ncRNA_intronic
CAediting_891320chr12_51295057_-ncRNA_intronic
CAediting_891321chr12_51295061_-ncRNA_intronic
CAediting_891322chr12_51295071_-ncRNA_intronic
CAediting_891323chr12_51295088_-ncRNA_intronic
CAediting_891324chr12_51295089_-ncRNA_intronic
CAediting_891325chr12_51295097_-ncRNA_intronic
CAediting_891326chr12_51295100_-ncRNA_intronic
CAediting_891327chr12_51295104_-ncRNA_intronic
CAediting_891328chr12_51295105_-ncRNA_intronic
CAediting_891329chr12_51295107_-ncRNA_intronic
CAediting_891330chr12_51295111_-ncRNA_intronic
CAediting_891331chr12_51295112_-ncRNA_intronic
CAediting_891332chr12_51295114_-ncRNA_intronic
CAediting_891333chr12_51295122_-ncRNA_intronic
CAediting_891334chr12_51295123_-ncRNA_intronic
CAediting_891335chr12_51295127_-ncRNA_intronic
CAediting_891336chr12_51295144_-ncRNA_intronic
CAediting_891337chr12_51295148_-ncRNA_intronic
CAediting_891338chr12_51295149_-ncRNA_intronic
CAediting_891339chr12_51295161_-ncRNA_intronic
CAediting_891340chr12_51295162_-ncRNA_intronic
CAediting_891341chr12_51295163_-ncRNA_intronic
CAediting_891342chr12_51295191_-ncRNA_intronic
CAediting_891343chr12_51295201_-ncRNA_intronic
CAediting_891344chr12_51295209_-ncRNA_intronic
CAediting_891345chr12_51295212_-ncRNA_intronic
CAediting_891346chr12_51295217_-ncRNA_intronic
CAediting_891347chr12_51295218_-ncRNA_intronic
CAediting_891348chr12_51295241_-ncRNA_intronic
CAediting_891349chr12_51298825_-ncRNA_intronic
CAediting_891350chr12_51298945_-ncRNA_intronic
CAediting_891351chr12_51299924_-ncRNA_intronic
CAediting_891352chr12_51299976_-ncRNA_intronic
CAediting_891353chr12_51299977_-ncRNA_intronic
CAediting_891354chr12_51300008_-ncRNA_intronic
CAediting_891355chr12_51300031_-ncRNA_intronic
CAediting_891356chr12_51300075_-ncRNA_intronic
CAediting_891357chr12_51301074_-ncRNA_intronic
CAediting_891358chr12_51301106_-ncRNA_intronic
CAediting_891359chr12_51301594_-ncRNA_intronic
CAediting_891360chr12_51301789_-ncRNA_intronic
CAediting_891361chr12_51304062_-ncRNA_intronic
CAediting_891362chr12_51304123_-ncRNA_intronic
CAediting_891363chr12_51304145_-ncRNA_intronic
CAediting_891364chr12_51304150_-ncRNA_intronic
CAediting_891365chr12_51304169_-ncRNA_intronic
CAediting_891366chr12_51304228_-ncRNA_intronic
CAediting_891367chr12_51305902_-ncRNA_intronic
CAediting_891368chr12_51305910_-ncRNA_intronic
CAediting_891369chr12_51305926_-ncRNA_intronic
CAediting_891370chr12_51305969_-ncRNA_intronic
CAediting_891371chr12_51305975_-ncRNA_intronic
CAediting_891372chr12_51306381_-ncRNA_intronic
CAediting_891373chr12_51306382_-ncRNA_intronic
CAediting_891374chr12_51306383_-ncRNA_intronic
CAediting_891375chr12_51306487_-ncRNA_intronic
CAediting_891376chr12_51309217_-ncRNA_intronic
CAediting_891377chr12_51309237_-ncRNA_intronic
CAediting_891378chr12_51310887_-ncRNA_intronic
CAediting_891379chr12_51310955_-ncRNA_intronic
CAediting_891380chr12_51311284_-ncRNA_intronic
CAediting_891381chr12_51311518_-ncRNA_intronic
CAediting_891382chr12_51311531_-ncRNA_intronic
CAediting_891383chr12_51313070_-ncRNA_intronic
CAediting_891384chr12_51313441_-ncRNA_intronic
CAediting_891385chr12_51313471_-ncRNA_intronic
CAediting_891386chr12_51313544_-ncRNA_intronic
CAediting_891387chr12_51313568_-ncRNA_intronic
CAediting_891388chr12_51313643_-ncRNA_intronic
CAediting_891389chr12_51313651_-ncRNA_intronic
CAediting_891390chr12_51314555_-ncRNA_intronic
CAediting_891391chr12_51314617_-ncRNA_intronic
CAediting_891392chr12_51315059_-ncRNA_intronic
CAediting_891393chr12_51318309_-ncRNA_intronic
CAediting_891394chr12_51318347_-ncRNA_intronic
CAediting_891395chr12_51318399_-ncRNA_intronic
CAediting_891396chr12_51318400_-ncRNA_intronic
CAediting_891397chr12_51319977_-ncRNA_intronic
CAediting_891398chr12_51322507_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_891277chr12_51281809_-SINEAluAluJo
CAediting_891278chr12_51281833_-SINEAluAluJo
CAediting_891279chr12_51282030_-SINEAluAluJo
CAediting_891280chr12_51285323_-SINEAluFAM
CAediting_891281chr12_51285333_-SINEAluFAM
CAediting_891282chr12_51285336_-SINEAluFAM
CAediting_891283chr12_51285345_-SINEAluFAM
CAediting_891284chr12_51285362_-SINEAluFAM
CAediting_891285chr12_51285363_-SINEAluFAM
CAediting_891286chr12_51285394_-SINEAluFAM
CAediting_891287chr12_51285440_-SINEAluFAM
CAediting_891288chr12_51285443_-SINEAluFAM
CAediting_891289chr12_51285448_-SINEAluFAM
CAediting_891290chr12_51285455_-SINEAluFAM
CAediting_891291chr12_51285620_-SINEAluAluSx1
CAediting_891292chr12_51285623_-SINEAluAluSx1
CAediting_891293chr12_51285624_-SINEAluAluSx1
CAediting_891294chr12_51285659_-SINEAluAluSx1
CAediting_891295chr12_51285721_-SINEAluAluSx1
CAediting_891296chr12_51285762_-SINEAluAluSx1
CAediting_891297chr12_51285884_-SINEAluAluSx1
CAediting_891298chr12_51285885_-SINEAluAluSx1
CAediting_891299chr12_51286902_-SINEAluAluJb
CAediting_891300chr12_51286908_-SINEAluAluJb
CAediting_891301chr12_51287213_-SINEAluFAM
CAediting_891302chr12_51288887_-SINEAluAluSc5
CAediting_891303chr12_51289737_-SINEAluAluJb
CAediting_891304chr12_51289798_-SINEAluAluJb
CAediting_891305chr12_51290401_-SINEAluAluSz
CAediting_891306chr12_51290402_-SINEAluAluSz
CAediting_891307chr12_51291417_-SINEAluAluJb
CAediting_891308chr12_51291517_-SINEAluAluJb
CAediting_891309chr12_51294962_-SINEAluAluJo
CAediting_891310chr12_51294963_-SINEAluAluJo
CAediting_891311chr12_51294968_-SINEAluAluJo
CAediting_891312chr12_51294985_-SINEAluAluJo
CAediting_891313chr12_51294995_-SINEAluAluJo
CAediting_891314chr12_51294998_-SINEAluAluJo
CAediting_891315chr12_51295005_-SINEAluAluJo
CAediting_891316chr12_51295030_-SINEAluAluJo
CAediting_891317chr12_51295035_-SINEAluAluJo
CAediting_891318chr12_51295044_-SINEAluAluJo
CAediting_891319chr12_51295047_-SINEAluAluJo
CAediting_891320chr12_51295057_-SINEAluAluJo
CAediting_891321chr12_51295061_-SINEAluAluJo
CAediting_891322chr12_51295071_-SINEAluAluJo
CAediting_891323chr12_51295088_-SINEAluAluJo
CAediting_891324chr12_51295089_-SINEAluAluJo
CAediting_891325chr12_51295097_-SINEAluAluJo
CAediting_891326chr12_51295100_-SINEAluAluJo
CAediting_891327chr12_51295104_-SINEAluAluJo
CAediting_891328chr12_51295105_-SINEAluAluJo
CAediting_891329chr12_51295107_-SINEAluAluJo
CAediting_891330chr12_51295111_-SINEAluAluJo
CAediting_891331chr12_51295112_-SINEAluAluJo
CAediting_891332chr12_51295114_-SINEAluAluJo
CAediting_891333chr12_51295122_-SINEAluAluJo
CAediting_891334chr12_51295123_-SINEAluAluJo
CAediting_891335chr12_51295127_-SINEAluAluJo
CAediting_891336chr12_51295144_-SINEAluAluJo
CAediting_891337chr12_51295148_-SINEAluAluJo
CAediting_891338chr12_51295149_-SINEAluAluJo
CAediting_891339chr12_51295161_-SINEAluAluJo
CAediting_891340chr12_51295162_-SINEAluAluJo
CAediting_891341chr12_51295163_-SINEAluAluJo
CAediting_891342chr12_51295191_-SINEAluAluJo
CAediting_891343chr12_51295201_-SINEAluAluJo
CAediting_891344chr12_51295209_-SINEAluAluJo
CAediting_891345chr12_51295212_-SINEAluAluJo
CAediting_891346chr12_51295217_-SINEAluAluJo
CAediting_891347chr12_51295218_-SINEAluAluJo
CAediting_891349chr12_51298825_-SINEAluAluSz6
CAediting_891350chr12_51298945_-SINEAluAluSz6
CAediting_891351chr12_51299924_-SINEAluAluSz6
CAediting_891352chr12_51299976_-SINEAluAluSz6
CAediting_891353chr12_51299977_-SINEAluAluSz6
CAediting_891354chr12_51300008_-SINEAluAluSz6
CAediting_891355chr12_51300031_-SINEAluAluSz6
CAediting_891356chr12_51300075_-SINEAluAluSz6
CAediting_891357chr12_51301074_-SINEAluAluSx
CAediting_891358chr12_51301106_-SINEAluAluSx
CAediting_891359chr12_51301594_-SINEAluAluJb
CAediting_891360chr12_51301789_-SINEAluAluJb
CAediting_891361chr12_51304062_-SINEAluAluSz
CAediting_891362chr12_51304123_-SINEAluAluSz
CAediting_891363chr12_51304145_-SINEAluAluSz
CAediting_891364chr12_51304150_-SINEAluAluSz
CAediting_891365chr12_51304169_-SINEAluAluSz
CAediting_891366chr12_51304228_-SINEAluAluSz
CAediting_891367chr12_51305902_-SINEAluAluSc8
CAediting_891368chr12_51305910_-SINEAluAluSc8
CAediting_891369chr12_51305926_-SINEAluAluSc8
CAediting_891370chr12_51305969_-SINEAluAluSc8
CAediting_891371chr12_51305975_-SINEAluAluSc8
CAediting_891372chr12_51306381_-SINEAluAluSx1
CAediting_891373chr12_51306382_-SINEAluAluSx1
CAediting_891374chr12_51306383_-SINEAluAluSx1
CAediting_891375chr12_51306487_-SINEAluAluSx1
CAediting_891376chr12_51309217_-SINEAluFLAM_C
CAediting_891377chr12_51309237_-SINEAluFLAM_C
CAediting_891378chr12_51310887_-SINEAluAluJb
CAediting_891379chr12_51310955_-SINEAluAluJb
CAediting_891380chr12_51311284_-SINEAluAluJr
CAediting_891381chr12_51311518_-SINEAluAluJo
CAediting_891382chr12_51311531_-SINEAluAluJo
CAediting_891383chr12_51313070_-SINEAluAluSx
CAediting_891384chr12_51313441_-SINEAluAluSq2
CAediting_891385chr12_51313471_-SINEAluAluSq2
CAediting_891386chr12_51313544_-SINEAluAluSq2
CAediting_891387chr12_51313568_-SINEAluAluSq2
CAediting_891390chr12_51314555_-SINEAluAluSp
CAediting_891391chr12_51314617_-SINEAluAluSp
CAediting_891392chr12_51315059_-SINEAluAluJb
CAediting_891393chr12_51318309_-SINEAluAluSx1
CAediting_891394chr12_51318347_-SINEAluAluSx1
CAediting_891395chr12_51318399_-SINEAluAluSx1
CAediting_891396chr12_51318400_-SINEAluAluSx1
CAediting_891397chr12_51319977_-SINEAluAluSx
CAediting_891398chr12_51322507_-SINEAluAluJb

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RNA A-to-I editing events in the alternative splicing sites for BIN2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000110934.9.BIN2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000110934.9.BIN2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for BIN2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for BIN2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for BIN2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-182751304145513041528mer-1a5130414551304163154.00-21.54
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-1910-3p51304147513041537mer-m85130414651304167153.00-20.56
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-29851304149513041557mer-m85130414851304171142.00-18.23
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-6511a-5p51304147513041537mer-m85130414651304169158.00-21.40
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-6511a-5p51304147513041537mer-m85130414651304169158.00-21.40
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-6511a-5p51304147513041537mer-m85130414651304169158.00-21.40
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-6511a-5p51304147513041537mer-m85130414651304169158.00-21.40
CAediting_891365chr12_51304169_-ENSG00000110934.9ENST00000605423hsa-miR-1247-3p51304167513041737mer-m85130416651304188164.00-31.86
CAediting_891366chr12_51304228_-ENSG00000110934.9ENST00000605423hsa-miR-1273c51304227513042326mer5130422651304247140.00-26.43
CAediting_891366chr12_51304228_-ENSG00000110934.9ENST00000605423hsa-miR-1307-3p51304223513042297mer-m85130422251304244146.00-20.65
CAediting_891362chr12_51304123_-ENSG00000110934.9ENST00000605423hsa-miR-17-3p51304120513041267mer-m85130412051304141143.00-19.51

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-let-7g-5p51304145513041528mer-1a5130414551304166147-17.37
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-let-7i-5p51304145513041528mer-1a5130414551304165153-20.23
CAediting_891362chr12_51304123_-ENSG00000110934.9ENST00000605423hsa-miR-20b-3p51304120513041267mer-m85130412051304141147-15.5
CAediting_891365chr12_51304169_-ENSG00000110934.9ENST00000605423hsa-miR-3689a-3p51304169513041757mer-m85130416851304191150-27.6
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-3927-3p51304147513041537mer-m85130414651304167140-11.88
CAediting_891363chr12_51304145_-ENSG00000110934.9ENST00000605423hsa-miR-392951304141513041477mer-m85130414051304161155-18.57
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-445851304145513041528mer-1a5130414551304163143-16.49
CAediting_891363chr12_51304145_-ENSG00000110934.9ENST00000605423hsa-miR-447851304141513041477mer-m85130414051304157154-24.07
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-450051304145513041528mer-1a5130414551304161151-15.53
CAediting_891362chr12_51304123_-ENSG00000110934.9ENST00000605423hsa-miR-454051304123513041286mer5130412251304144140-19.72
CAediting_891363chr12_51304145_-ENSG00000110934.9ENST00000605423hsa-miR-485-5p51304140513041467mer-m85130413951304160149-14.58
CAediting_891365chr12_51304169_-ENSG00000110934.9ENST00000605423hsa-miR-490-3p51304165513041717mer-m85130416451304186146-19.52
CAediting_891366chr12_51304228_-ENSG00000110934.9ENST00000605423hsa-miR-542-3p51304227513042337mer-m85130422651304246152-13.23
CAediting_891365chr12_51304169_-ENSG00000110934.9ENST00000605423hsa-miR-6779-5p51304169513041757mer-m85130416851304188144-24.05
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-6831-5p51304147513041537mer-m85130414651304169143-15.3
CAediting_891365chr12_51304169_-ENSG00000110934.9ENST00000605423hsa-miR-6852-5p51304167513041726mer5130416651304185140-25.13
CAediting_891363chr12_51304145_-ENSG00000110934.9ENST00000605423hsa-miR-6884-5p51304140513041467mer-m85130413951304162153-23.07
CAediting_891363chr12_51304145_-ENSG00000110934.9ENST00000605423hsa-miR-7160-5p51304143513041497mer-m85130414251304162146-20.06
CAediting_891364chr12_51304150_-ENSG00000110934.9ENST00000605423hsa-miR-98-5p51304145513041528mer-1a5130414551304166153-18.94

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_846604chr11_93733708_-ENSG00000110934.9ENST00000605423hsa-miR-1304-3p51302722513027287mer-m85130272151302740144-16.85

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for BIN2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for BIN2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for BIN2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for BIN2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for BIN2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for BIN2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource