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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

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Related drugs with this gene

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Related diseases with this gene

Editing gene: PHF21A (CAeditome ID:51317)

Gene summary for PHF21A

check button Gene summary
Gene informationGene symbol

PHF21A

Gene ID

51317

Gene namePHD finger protein 21A
SynonymsBHC80|BM-006|IDDBCS|NEDMS
Cytomap

11p11.2

Type of geneprotein-coding
DescriptionPHD finger protein 21ABHC80aBRAF35-HDAC complex protein BHC80BRAF35/HDAC2 complex (80 kDa)
Modification date20210529
UniProtAcc

Q96BD5

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
PHF21A

GO:0000118

PHD finger protein 21A

15325272

PHF21A

GO:1990391

PHD finger protein 21A

24217620


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RNA A-to-I events for PHF21A

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000135365.14

check button RNA A-to-I editing events in Cancer.
CAediting_807310(45940328, -), CAediting_807311(45941300, -), CAediting_807312(45943220, -), CAediting_807313(45943225, -), CAediting_807314(45944839, -), CAediting_807315(45963981, -), CAediting_807316(45964001, -), CAediting_807317(45972552, -), CAediting_807318(45972581, -), CAediting_807319(45974516, -), CAediting_807320(45974592, -), CAediting_807321(45974605, -), CAediting_807322(45974618, -), CAediting_807323(45974631, -), CAediting_807324(45974654, -), CAediting_807325(45974673, -), CAediting_807326(45974717, -), CAediting_807327(45974719, -), CAediting_807328(45975069, -), CAediting_807329(45975079, -), CAediting_807330(45975134, -), CAediting_807331(45975170, -), CAediting_807332(45975206, -), CAediting_807333(45975219, -), CAediting_807334(45975238, -), CAediting_807335(45975267, -), CAediting_807336(45975268, -), CAediting_807337(45975308, -), CAediting_807338(45976583, -), CAediting_807339(45976585, -), CAediting_807340(45976616, -), CAediting_807341(45976624, -), CAediting_807342(45976639, -), CAediting_807343(45976662, -), CAediting_807344(45976670, -), CAediting_807345(45976672, -), CAediting_807346(45976673, -), CAediting_807347(45976676, -), CAediting_807348(45976698, -), CAediting_807349(45976707, -), CAediting_807350(45976714, -), CAediting_807351(45976730, -), CAediting_807352(45976742, -), CAediting_807353(45976747, -), CAediting_807354(45976782, -), CAediting_807355(45976788, -), CAediting_807356(45976828, -), CAediting_807357(45976832, -), CAediting_807358(45977169, -), CAediting_807359(45977170, -), CAediting_807360(45977173, -), CAediting_807361(45977233, -), CAediting_807362(45977234, -), CAediting_807363(45977239, -), CAediting_807364(45977248, -), CAediting_807365(45977252, -), CAediting_807366(45977258, -), CAediting_807367(45977269, -), CAediting_807368(45977274, -), CAediting_807369(45977275, -), CAediting_807370(45977281, -), CAediting_807371(45977283, -), CAediting_807372(45977287, -), CAediting_807373(45977288, -), CAediting_807374(45977301, -), CAediting_807375(45977304, -), CAediting_807376(45977305, -), CAediting_807377(45977306, -), CAediting_807378(45977307, -), CAediting_807379(45977310, -), CAediting_807380(45977316, -), CAediting_807381(45977319, -), CAediting_807382(45977325, -), CAediting_807383(45977331, -), CAediting_807384(45977332, -), CAediting_807385(45977333, -), CAediting_807386(45977404, -), CAediting_807387(45977409, -), CAediting_807388(45977410, -), CAediting_807389(45977418, -), CAediting_807390(45977426, -), CAediting_807391(45977432, -), CAediting_807392(45978051, -), CAediting_807393(45978058, -), CAediting_807394(45978108, -), CAediting_807395(45978115, -), CAediting_807396(45978120, -), CAediting_807397(45978134, -), CAediting_807398(45978137, -), CAediting_807399(45978143, -), CAediting_807400(45978152, -), CAediting_807401(45978165, -), CAediting_807402(45978178, -), CAediting_807403(45978188, -), CAediting_807404(45978200, -), CAediting_807405(45978214, -), CAediting_807406(45978217, -), CAediting_807407(45978287, -), CAediting_807408(45979047, -), CAediting_807409(45979052, -), CAediting_807410(45979077, -), CAediting_807411(45979113, -), CAediting_807412(45979114, -), CAediting_807413(45979119, -), CAediting_807414(45979149, -), CAediting_807415(45979154, -), CAediting_807416(45979155, -), CAediting_807417(45979168, -), CAediting_807418(45979177, -), CAediting_807419(45979181, -), CAediting_807420(45979195, -), CAediting_807421(45979212, -), CAediting_807422(45979222, -), CAediting_807423(45979246, -), CAediting_807424(45979283, -), CAediting_807425(45979286, -), CAediting_807426(45979292, -), CAediting_807427(45979305, -), CAediting_807428(45981262, -), CAediting_807429(45982032, -), CAediting_807430(45982038, -), CAediting_807431(45982039, -), CAediting_807432(45982089, -), CAediting_807433(45982095, -), CAediting_807434(45982108, -), CAediting_807435(45982124, -), CAediting_807436(45982173, -), CAediting_807437(45982224, -), CAediting_807438(45982229, -), CAediting_807439(45988791, -), CAediting_807440(45988855, -), CAediting_807441(45990335, -), CAediting_807442(45990347, -), CAediting_807443(45990356, -), CAediting_807444(45990361, -), CAediting_807445(45990391, -), CAediting_807446(45990397, -), CAediting_807447(45990423, -), CAediting_807448(45990433, -), CAediting_807449(45990435, -), CAediting_807450(45990436, -), CAediting_807451(45990438, -), CAediting_807452(45990442, -), CAediting_807453(45990463, -), CAediting_807454(45990468, -), CAediting_807455(45990487, -), CAediting_807456(45990532, -), CAediting_807457(45990533, -), CAediting_807458(45990539, -), CAediting_807459(45990549, -), CAediting_807460(45990555, -), CAediting_807461(45996175, -), CAediting_807462(45998615, -), CAediting_807463(46000838, -), CAediting_807464(46007386, -), CAediting_807465(46007410, -), CAediting_807466(46007416, -), CAediting_807467(46007435, -), CAediting_807468(46007451, -), CAediting_807469(46007452, -), CAediting_807470(46009037, -), CAediting_807471(46009071, -), CAediting_807472(46009072, -), CAediting_807473(46009096, -), CAediting_807474(46009099, -), CAediting_807475(46009107, -), CAediting_807476(46009112, -), CAediting_807477(46021162, -), CAediting_807478(46021607, -), CAediting_807479(46021613, -), CAediting_807480(46021653, -), CAediting_807481(46021706, -), CAediting_807482(46021751, -), CAediting_807483(46021782, -), CAediting_807484(46021783, -), CAediting_807485(46021849, -), CAediting_807486(46022235, -), CAediting_807487(46022285, -), CAediting_807488(46022342, -), CAediting_807489(46022373, -), CAediting_807490(46022403, -), CAediting_807491(46022504, -), CAediting_807492(46022910, -), CAediting_807493(46022918, -), CAediting_807494(46022988, -), CAediting_807495(46022997, -), CAediting_807496(46028650, -), CAediting_807497(46028698, -), CAediting_807498(46028702, -), CAediting_807499(46028711, -), CAediting_807500(46028747, -), CAediting_807501(46028749, -), CAediting_807502(46028750, -), CAediting_807503(46028751, -), CAediting_807504(46028752, -), CAediting_807505(46028753, -), CAediting_807506(46028756, -), CAediting_807507(46028762, -), CAediting_807508(46028767, -), CAediting_807509(46028781, -), CAediting_807510(46028790, -), CAediting_807511(46028791, -), CAediting_807512(46028839, -), CAediting_807513(46028844, -), CAediting_807514(46028845, -), CAediting_807515(46029437, -), CAediting_807516(46029564, -), CAediting_807517(46029566, -), CAediting_807518(46029588, -), CAediting_807519(46036966, -), CAediting_807520(46038129, -), CAediting_807521(46038203, -), CAediting_807522(46038251, -), CAediting_807523(46038276, -), CAediting_807524(46038401, -), CAediting_807525(46059546, -), CAediting_807526(46059572, -), CAediting_807527(46059607, -), CAediting_807528(46059809, -), CAediting_807529(46059947, -), CAediting_807530(46066637, -), CAediting_807531(46073139, -), CAediting_807532(46073265, -), CAediting_807533(46074667, -), CAediting_807534(46074679, -), CAediting_807535(46074698, -), CAediting_807536(46092788, -), CAediting_807537(46092855, -), CAediting_807538(46092882, -), CAediting_807539(46092890, -), CAediting_807540(46092904, -), CAediting_807541(46101734, -), CAediting_807542(46101950, -), CAediting_807543(46101982, -), CAediting_807544(46101986, -), CAediting_807545(46109840, -), CAediting_807546(46109858, -), CAediting_807547(46109868, -), CAediting_807548(46109905, -), CAediting_807549(46111474, -), CAediting_807550(46121068, -),

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RNA editing positional annotations for PHF21A using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_807310chr11_45940328_-ncRNA_intronic
CAediting_807311chr11_45941300_-ncRNA_intronic
CAediting_807312chr11_45943220_-ncRNA_intronic
CAediting_807313chr11_45943225_-ncRNA_intronic
CAediting_807314chr11_45944839_-ncRNA_intronic
CAediting_807315chr11_45963981_-ncRNA_intronic
CAediting_807316chr11_45964001_-ncRNA_intronic
CAediting_807317chr11_45972552_-ncRNA_intronic
CAediting_807318chr11_45972581_-ncRNA_intronic
CAediting_807319chr11_45974516_-ncRNA_intronic
CAediting_807320chr11_45974592_-ncRNA_intronic
CAediting_807321chr11_45974605_-ncRNA_intronic
CAediting_807322chr11_45974618_-ncRNA_intronic
CAediting_807323chr11_45974631_-ncRNA_intronic
CAediting_807324chr11_45974654_-ncRNA_intronic
CAediting_807325chr11_45974673_-ncRNA_intronic
CAediting_807326chr11_45974717_-ncRNA_intronic
CAediting_807327chr11_45974719_-ncRNA_intronic
CAediting_807328chr11_45975069_-ncRNA_intronic
CAediting_807329chr11_45975079_-ncRNA_intronic
CAediting_807330chr11_45975134_-ncRNA_intronic
CAediting_807331chr11_45975170_-ncRNA_intronic
CAediting_807332chr11_45975206_-ncRNA_intronic
CAediting_807333chr11_45975219_-ncRNA_intronic
CAediting_807334chr11_45975238_-ncRNA_intronic
CAediting_807335chr11_45975267_-ncRNA_intronic
CAediting_807336chr11_45975268_-ncRNA_intronic
CAediting_807337chr11_45975308_-ncRNA_intronic
CAediting_807338chr11_45976583_-ncRNA_intronic
CAediting_807339chr11_45976585_-ncRNA_intronic
CAediting_807340chr11_45976616_-ncRNA_intronic
CAediting_807341chr11_45976624_-ncRNA_intronic
CAediting_807342chr11_45976639_-ncRNA_intronic
CAediting_807343chr11_45976662_-ncRNA_intronic
CAediting_807344chr11_45976670_-ncRNA_intronic
CAediting_807345chr11_45976672_-ncRNA_intronic
CAediting_807346chr11_45976673_-ncRNA_intronic
CAediting_807347chr11_45976676_-ncRNA_intronic
CAediting_807348chr11_45976698_-ncRNA_intronic
CAediting_807349chr11_45976707_-ncRNA_intronic
CAediting_807350chr11_45976714_-ncRNA_intronic
CAediting_807351chr11_45976730_-ncRNA_intronic
CAediting_807352chr11_45976742_-ncRNA_intronic
CAediting_807353chr11_45976747_-ncRNA_intronic
CAediting_807354chr11_45976782_-ncRNA_intronic
CAediting_807355chr11_45976788_-ncRNA_intronic
CAediting_807356chr11_45976828_-ncRNA_intronic
CAediting_807357chr11_45976832_-ncRNA_intronic
CAediting_807358chr11_45977169_-ncRNA_intronic
CAediting_807359chr11_45977170_-ncRNA_intronic
CAediting_807360chr11_45977173_-ncRNA_intronic
CAediting_807361chr11_45977233_-ncRNA_intronic
CAediting_807362chr11_45977234_-ncRNA_intronic
CAediting_807363chr11_45977239_-ncRNA_intronic
CAediting_807364chr11_45977248_-ncRNA_intronic
CAediting_807365chr11_45977252_-ncRNA_intronic
CAediting_807366chr11_45977258_-ncRNA_intronic
CAediting_807367chr11_45977269_-ncRNA_intronic
CAediting_807368chr11_45977274_-ncRNA_intronic
CAediting_807369chr11_45977275_-ncRNA_intronic
CAediting_807370chr11_45977281_-ncRNA_intronic
CAediting_807371chr11_45977283_-ncRNA_intronic
CAediting_807372chr11_45977287_-ncRNA_intronic
CAediting_807373chr11_45977288_-ncRNA_intronic
CAediting_807374chr11_45977301_-ncRNA_intronic
CAediting_807375chr11_45977304_-ncRNA_intronic
CAediting_807376chr11_45977305_-ncRNA_intronic
CAediting_807377chr11_45977306_-ncRNA_intronic
CAediting_807378chr11_45977307_-ncRNA_intronic
CAediting_807379chr11_45977310_-ncRNA_intronic
CAediting_807380chr11_45977316_-ncRNA_intronic
CAediting_807381chr11_45977319_-ncRNA_intronic
CAediting_807382chr11_45977325_-ncRNA_intronic
CAediting_807383chr11_45977331_-ncRNA_intronic
CAediting_807384chr11_45977332_-ncRNA_intronic
CAediting_807385chr11_45977333_-ncRNA_intronic
CAediting_807386chr11_45977404_-ncRNA_intronic
CAediting_807387chr11_45977409_-ncRNA_intronic
CAediting_807388chr11_45977410_-ncRNA_intronic
CAediting_807389chr11_45977418_-ncRNA_intronic
CAediting_807390chr11_45977426_-ncRNA_intronic
CAediting_807391chr11_45977432_-ncRNA_intronic
CAediting_807392chr11_45978051_-ncRNA_intronic
CAediting_807393chr11_45978058_-ncRNA_intronic
CAediting_807394chr11_45978108_-ncRNA_intronic
CAediting_807395chr11_45978115_-ncRNA_intronic
CAediting_807396chr11_45978120_-ncRNA_intronic
CAediting_807397chr11_45978134_-ncRNA_intronic
CAediting_807398chr11_45978137_-ncRNA_intronic
CAediting_807399chr11_45978143_-ncRNA_intronic
CAediting_807400chr11_45978152_-ncRNA_intronic
CAediting_807401chr11_45978165_-ncRNA_intronic
CAediting_807402chr11_45978178_-ncRNA_intronic
CAediting_807403chr11_45978188_-ncRNA_intronic
CAediting_807404chr11_45978200_-ncRNA_intronic
CAediting_807405chr11_45978214_-ncRNA_intronic
CAediting_807406chr11_45978217_-ncRNA_intronic
CAediting_807407chr11_45978287_-ncRNA_intronic
CAediting_807408chr11_45979047_-ncRNA_intronic
CAediting_807409chr11_45979052_-ncRNA_intronic
CAediting_807410chr11_45979077_-ncRNA_intronic
CAediting_807411chr11_45979113_-ncRNA_intronic
CAediting_807412chr11_45979114_-ncRNA_intronic
CAediting_807413chr11_45979119_-ncRNA_intronic
CAediting_807414chr11_45979149_-ncRNA_intronic
CAediting_807415chr11_45979154_-ncRNA_intronic
CAediting_807416chr11_45979155_-ncRNA_intronic
CAediting_807417chr11_45979168_-ncRNA_intronic
CAediting_807418chr11_45979177_-ncRNA_intronic
CAediting_807419chr11_45979181_-ncRNA_intronic
CAediting_807420chr11_45979195_-ncRNA_intronic
CAediting_807421chr11_45979212_-ncRNA_intronic
CAediting_807422chr11_45979222_-ncRNA_intronic
CAediting_807423chr11_45979246_-ncRNA_intronic
CAediting_807424chr11_45979283_-ncRNA_intronic
CAediting_807425chr11_45979286_-ncRNA_intronic
CAediting_807426chr11_45979292_-ncRNA_intronic
CAediting_807427chr11_45979305_-ncRNA_intronic
CAediting_807428chr11_45981262_-ncRNA_intronic
CAediting_807429chr11_45982032_-ncRNA_intronic
CAediting_807430chr11_45982038_-ncRNA_intronic
CAediting_807431chr11_45982039_-ncRNA_intronic
CAediting_807432chr11_45982089_-ncRNA_intronic
CAediting_807433chr11_45982095_-ncRNA_intronic
CAediting_807434chr11_45982108_-ncRNA_intronic
CAediting_807435chr11_45982124_-ncRNA_intronic
CAediting_807436chr11_45982173_-ncRNA_intronic
CAediting_807437chr11_45982224_-ncRNA_intronic
CAediting_807438chr11_45982229_-ncRNA_intronic
CAediting_807439chr11_45988791_-ncRNA_intronic
CAediting_807440chr11_45988855_-ncRNA_intronic
CAediting_807441chr11_45990335_-ncRNA_intronic
CAediting_807442chr11_45990347_-ncRNA_intronic
CAediting_807443chr11_45990356_-ncRNA_intronic
CAediting_807444chr11_45990361_-ncRNA_intronic
CAediting_807445chr11_45990391_-ncRNA_intronic
CAediting_807446chr11_45990397_-ncRNA_intronic
CAediting_807447chr11_45990423_-ncRNA_intronic
CAediting_807448chr11_45990433_-ncRNA_intronic
CAediting_807449chr11_45990435_-ncRNA_intronic
CAediting_807450chr11_45990436_-ncRNA_intronic
CAediting_807451chr11_45990438_-ncRNA_intronic
CAediting_807452chr11_45990442_-ncRNA_intronic
CAediting_807453chr11_45990463_-ncRNA_intronic
CAediting_807454chr11_45990468_-ncRNA_intronic
CAediting_807455chr11_45990487_-ncRNA_intronic
CAediting_807456chr11_45990532_-ncRNA_intronic
CAediting_807457chr11_45990533_-ncRNA_intronic
CAediting_807458chr11_45990539_-ncRNA_intronic
CAediting_807459chr11_45990549_-ncRNA_intronic
CAediting_807460chr11_45990555_-ncRNA_intronic
CAediting_807461chr11_45996175_-ncRNA_intronic
CAediting_807462chr11_45998615_-ncRNA_intronic
CAediting_807463chr11_46000838_-ncRNA_intronic
CAediting_807464chr11_46007386_-ncRNA_intronic
CAediting_807465chr11_46007410_-ncRNA_intronic
CAediting_807466chr11_46007416_-ncRNA_intronic
CAediting_807467chr11_46007435_-ncRNA_intronic
CAediting_807468chr11_46007451_-ncRNA_intronic
CAediting_807469chr11_46007452_-ncRNA_intronic
CAediting_807470chr11_46009037_-ncRNA_intronic
CAediting_807471chr11_46009071_-ncRNA_intronic
CAediting_807472chr11_46009072_-ncRNA_intronic
CAediting_807473chr11_46009096_-ncRNA_intronic
CAediting_807474chr11_46009099_-ncRNA_intronic
CAediting_807475chr11_46009107_-ncRNA_intronic
CAediting_807476chr11_46009112_-ncRNA_intronic
CAediting_807477chr11_46021162_-ncRNA_intronic
CAediting_807478chr11_46021607_-ncRNA_intronic
CAediting_807479chr11_46021613_-ncRNA_intronic
CAediting_807480chr11_46021653_-ncRNA_intronic
CAediting_807481chr11_46021706_-ncRNA_intronic
CAediting_807482chr11_46021751_-ncRNA_intronic
CAediting_807483chr11_46021782_-ncRNA_intronic
CAediting_807484chr11_46021783_-ncRNA_intronic
CAediting_807485chr11_46021849_-ncRNA_intronic
CAediting_807486chr11_46022235_-ncRNA_intronic
CAediting_807487chr11_46022285_-ncRNA_intronic
CAediting_807488chr11_46022342_-ncRNA_intronic
CAediting_807489chr11_46022373_-ncRNA_intronic
CAediting_807490chr11_46022403_-ncRNA_intronic
CAediting_807491chr11_46022504_-ncRNA_intronic
CAediting_807492chr11_46022910_-ncRNA_intronic
CAediting_807493chr11_46022918_-ncRNA_intronic
CAediting_807494chr11_46022988_-ncRNA_intronic
CAediting_807495chr11_46022997_-ncRNA_intronic
CAediting_807496chr11_46028650_-intronic
CAediting_807497chr11_46028698_-intronic
CAediting_807498chr11_46028702_-intronic
CAediting_807499chr11_46028711_-intronic
CAediting_807500chr11_46028747_-intronic
CAediting_807501chr11_46028749_-intronic
CAediting_807502chr11_46028750_-intronic
CAediting_807503chr11_46028751_-intronic
CAediting_807504chr11_46028752_-intronic
CAediting_807505chr11_46028753_-intronic
CAediting_807506chr11_46028756_-intronic
CAediting_807507chr11_46028762_-intronic
CAediting_807508chr11_46028767_-intronic
CAediting_807509chr11_46028781_-intronic
CAediting_807510chr11_46028790_-intronic
CAediting_807511chr11_46028791_-intronic
CAediting_807512chr11_46028839_-intronic
CAediting_807513chr11_46028844_-intronic
CAediting_807514chr11_46028845_-intronic
CAediting_807515chr11_46029437_-intronic
CAediting_807516chr11_46029564_-intronic
CAediting_807517chr11_46029566_-intronic
CAediting_807518chr11_46029588_-intronic
CAediting_807519chr11_46036966_-intronic
CAediting_807520chr11_46038129_-intronic
CAediting_807521chr11_46038203_-intronic
CAediting_807522chr11_46038251_-intronic
CAediting_807523chr11_46038276_-intronic
CAediting_807524chr11_46038401_-intronic
CAediting_807525chr11_46059546_-intronic
CAediting_807526chr11_46059572_-intronic
CAediting_807527chr11_46059607_-intronic
CAediting_807528chr11_46059809_-intronic
CAediting_807529chr11_46059947_-intronic
CAediting_807530chr11_46066637_-intronic
CAediting_807531chr11_46073139_-intronic
CAediting_807532chr11_46073265_-intronic
CAediting_807533chr11_46074667_-intronic
CAediting_807534chr11_46074679_-intronic
CAediting_807535chr11_46074698_-intronic
CAediting_807536chr11_46092788_-ncRNA_intronic
CAediting_807537chr11_46092855_-ncRNA_intronic
CAediting_807538chr11_46092882_-ncRNA_intronic
CAediting_807539chr11_46092890_-ncRNA_intronic
CAediting_807540chr11_46092904_-ncRNA_intronic
CAediting_807541chr11_46101734_-ncRNA_intronic
CAediting_807542chr11_46101950_-ncRNA_intronic
CAediting_807543chr11_46101982_-ncRNA_intronic
CAediting_807544chr11_46101986_-ncRNA_intronic
CAediting_807545chr11_46109840_-ncRNA_intronic
CAediting_807546chr11_46109858_-ncRNA_intronic
CAediting_807547chr11_46109868_-ncRNA_intronic
CAediting_807548chr11_46109905_-ncRNA_intronic
CAediting_807549chr11_46111474_-ncRNA_intronic
CAediting_807550chr11_46121068_-UTR5

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_807310chr11_45940328_-SINEAluAluSx1
CAediting_807311chr11_45941300_-SINEAluAluJb
CAediting_807312chr11_45943220_-SINEAluAluJb
CAediting_807313chr11_45943225_-SINEAluAluJb
CAediting_807314chr11_45944839_-SINEAluAluSx
CAediting_807315chr11_45963981_-SINEAluAluSp
CAediting_807316chr11_45964001_-SINEAluAluSp
CAediting_807317chr11_45972552_-SINEAluAluSq2
CAediting_807318chr11_45972581_-SINEAluAluSq2
CAediting_807319chr11_45974516_-SINEAluAluJr
CAediting_807320chr11_45974592_-SINEAluAluJr
CAediting_807321chr11_45974605_-SINEAluAluJr
CAediting_807322chr11_45974618_-SINEAluAluJr
CAediting_807323chr11_45974631_-SINEAluAluJr
CAediting_807324chr11_45974654_-SINEAluAluJr
CAediting_807325chr11_45974673_-SINEAluAluJr
CAediting_807326chr11_45974717_-SINEAluAluJr
CAediting_807327chr11_45974719_-SINEAluAluJr
CAediting_807328chr11_45975069_-SINEAluAluJb
CAediting_807329chr11_45975079_-SINEAluAluJb
CAediting_807330chr11_45975134_-SINEAluAluJb
CAediting_807331chr11_45975170_-SINEAluAluJb
CAediting_807332chr11_45975206_-SINEAluAluJb
CAediting_807333chr11_45975219_-SINEAluAluJb
CAediting_807334chr11_45975238_-SINEAluAluJb
CAediting_807335chr11_45975267_-SINEAluAluJb
CAediting_807336chr11_45975268_-SINEAluAluJb
CAediting_807337chr11_45975308_-SINEAluAluJb
CAediting_807338chr11_45976583_-SINEAluAluJb
CAediting_807339chr11_45976585_-SINEAluAluJb
CAediting_807340chr11_45976616_-SINEAluAluJb
CAediting_807341chr11_45976624_-SINEAluAluJb
CAediting_807342chr11_45976639_-SINEAluAluJb
CAediting_807343chr11_45976662_-SINEAluAluJb
CAediting_807344chr11_45976670_-SINEAluAluJb
CAediting_807345chr11_45976672_-SINEAluAluJb
CAediting_807346chr11_45976673_-SINEAluAluJb
CAediting_807347chr11_45976676_-SINEAluAluJb
CAediting_807348chr11_45976698_-SINEAluAluJb
CAediting_807349chr11_45976707_-SINEAluAluJb
CAediting_807350chr11_45976714_-SINEAluAluJb
CAediting_807351chr11_45976730_-SINEAluAluJb
CAediting_807352chr11_45976742_-SINEAluAluJb
CAediting_807353chr11_45976747_-SINEAluAluJb
CAediting_807354chr11_45976782_-SINEAluAluJb
CAediting_807355chr11_45976788_-SINEAluAluJb
CAediting_807356chr11_45976828_-SINEAluAluJb
CAediting_807357chr11_45976832_-SINEAluAluJb
CAediting_807358chr11_45977169_-SINEAluAluSz6
CAediting_807359chr11_45977170_-SINEAluAluSz6
CAediting_807360chr11_45977173_-SINEAluAluSz6
CAediting_807361chr11_45977233_-SINEAluAluSz6
CAediting_807362chr11_45977234_-SINEAluAluSz6
CAediting_807363chr11_45977239_-SINEAluAluSz6
CAediting_807364chr11_45977248_-SINEAluAluSz6
CAediting_807365chr11_45977252_-SINEAluAluSz6
CAediting_807366chr11_45977258_-SINEAluAluSz6
CAediting_807367chr11_45977269_-SINEAluAluSz6
CAediting_807368chr11_45977274_-SINEAluAluSz6
CAediting_807369chr11_45977275_-SINEAluAluSz6
CAediting_807370chr11_45977281_-SINEAluAluSz6
CAediting_807371chr11_45977283_-SINEAluAluSz6
CAediting_807372chr11_45977287_-SINEAluAluSz6
CAediting_807373chr11_45977288_-SINEAluAluSz6
CAediting_807374chr11_45977301_-SINEAluAluSz6
CAediting_807375chr11_45977304_-SINEAluAluSz6
CAediting_807376chr11_45977305_-SINEAluAluSz6
CAediting_807377chr11_45977306_-SINEAluAluSz6
CAediting_807378chr11_45977307_-SINEAluAluSz6
CAediting_807379chr11_45977310_-SINEAluAluSz6
CAediting_807380chr11_45977316_-SINEAluAluSz6
CAediting_807381chr11_45977319_-SINEAluAluSz6
CAediting_807382chr11_45977325_-SINEAluAluSz6
CAediting_807383chr11_45977331_-SINEAluAluSz6
CAediting_807384chr11_45977332_-SINEAluAluSz6
CAediting_807385chr11_45977333_-SINEAluAluSz6
CAediting_807386chr11_45977404_-SINEAluAluSz6
CAediting_807387chr11_45977409_-SINEAluAluSz6
CAediting_807388chr11_45977410_-SINEAluAluSz6
CAediting_807389chr11_45977418_-SINEAluAluSz6
CAediting_807390chr11_45977426_-SINEAluAluSz6
CAediting_807391chr11_45977432_-SINEAluAluSz6
CAediting_807392chr11_45978051_-SINEAluAluSx4
CAediting_807393chr11_45978058_-SINEAluAluSx4
CAediting_807394chr11_45978108_-SINEAluAluSx4
CAediting_807395chr11_45978115_-SINEAluAluSx4
CAediting_807396chr11_45978120_-SINEAluAluSx4
CAediting_807397chr11_45978134_-SINEAluAluSx4
CAediting_807398chr11_45978137_-SINEAluAluSx4
CAediting_807399chr11_45978143_-SINEAluAluSx4
CAediting_807400chr11_45978152_-SINEAluAluSx4
CAediting_807401chr11_45978165_-SINEAluAluSx4
CAediting_807402chr11_45978178_-SINEAluAluSx4
CAediting_807403chr11_45978188_-SINEAluAluSx4
CAediting_807404chr11_45978200_-SINEAluAluSx4
CAediting_807405chr11_45978214_-SINEAluAluSx4
CAediting_807406chr11_45978217_-SINEAluAluSx4
CAediting_807407chr11_45978287_-SINEAluAluSx4
CAediting_807408chr11_45979047_-SINEAluAluSx1
CAediting_807409chr11_45979052_-SINEAluAluSx1
CAediting_807410chr11_45979077_-SINEAluAluSx1
CAediting_807411chr11_45979113_-SINEAluAluSx1
CAediting_807412chr11_45979114_-SINEAluAluSx1
CAediting_807413chr11_45979119_-SINEAluAluSx1
CAediting_807414chr11_45979149_-SINEAluAluSx1
CAediting_807415chr11_45979154_-SINEAluAluSx1
CAediting_807416chr11_45979155_-SINEAluAluSx1
CAediting_807417chr11_45979168_-SINEAluAluSx1
CAediting_807418chr11_45979177_-SINEAluAluSx1
CAediting_807419chr11_45979181_-SINEAluAluSx1
CAediting_807420chr11_45979195_-SINEAluAluSx1
CAediting_807421chr11_45979212_-SINEAluAluSx1
CAediting_807422chr11_45979222_-SINEAluAluSx1
CAediting_807423chr11_45979246_-SINEAluAluSx1
CAediting_807424chr11_45979283_-SINEAluAluSx1
CAediting_807425chr11_45979286_-SINEAluAluSx1
CAediting_807426chr11_45979292_-SINEAluAluSx1
CAediting_807427chr11_45979305_-SINEAluAluSx1
CAediting_807428chr11_45981262_-SINEAluAluSz
CAediting_807429chr11_45982032_-SINEAluAluJb
CAediting_807430chr11_45982038_-SINEAluAluJb
CAediting_807431chr11_45982039_-SINEAluAluJb
CAediting_807432chr11_45982089_-SINEAluAluJb
CAediting_807433chr11_45982095_-SINEAluAluJb
CAediting_807434chr11_45982108_-SINEAluAluJb
CAediting_807435chr11_45982124_-SINEAluAluJb
CAediting_807436chr11_45982173_-SINEAluAluJb
CAediting_807437chr11_45982224_-SINEAluAluJb
CAediting_807438chr11_45982229_-SINEAluAluJb
CAediting_807439chr11_45988791_-SINEAluAluSz6
CAediting_807440chr11_45988855_-SINEAluAluSz6
CAediting_807441chr11_45990335_-SINEAluAluJb
CAediting_807442chr11_45990347_-SINEAluAluJb
CAediting_807443chr11_45990356_-SINEAluAluJb
CAediting_807444chr11_45990361_-SINEAluAluJb
CAediting_807445chr11_45990391_-SINEAluAluJb
CAediting_807446chr11_45990397_-SINEAluAluJb
CAediting_807447chr11_45990423_-SINEAluAluJb
CAediting_807448chr11_45990433_-SINEAluAluJb
CAediting_807449chr11_45990435_-SINEAluAluJb
CAediting_807450chr11_45990436_-SINEAluAluJb
CAediting_807451chr11_45990438_-SINEAluAluJb
CAediting_807452chr11_45990442_-SINEAluAluJb
CAediting_807453chr11_45990463_-SINEAluAluJb
CAediting_807454chr11_45990468_-SINEAluAluJb
CAediting_807455chr11_45990487_-SINEAluAluJb
CAediting_807456chr11_45990532_-SINEAluAluJb
CAediting_807457chr11_45990533_-SINEAluAluJb
CAediting_807458chr11_45990539_-SINEAluAluJb
CAediting_807459chr11_45990549_-SINEAluAluJb
CAediting_807460chr11_45990555_-SINEAluAluJb
CAediting_807461chr11_45996175_-SINEAluAluJr4
CAediting_807462chr11_45998615_-SINEAluAluSp
CAediting_807463chr11_46000838_-SINEAluAluSq2
CAediting_807464chr11_46007386_-SINEAluAluSq2
CAediting_807465chr11_46007410_-SINEAluAluSq2
CAediting_807466chr11_46007416_-SINEAluAluSq2
CAediting_807467chr11_46007435_-SINEAluAluSq2
CAediting_807468chr11_46007451_-SINEAluAluSq2
CAediting_807469chr11_46007452_-SINEAluAluSq2
CAediting_807470chr11_46009037_-SINEAluAluSx
CAediting_807471chr11_46009071_-SINEAluAluSx
CAediting_807472chr11_46009072_-SINEAluAluSx
CAediting_807473chr11_46009096_-SINEAluAluSx
CAediting_807474chr11_46009099_-SINEAluAluSx
CAediting_807475chr11_46009107_-SINEAluAluSx
CAediting_807476chr11_46009112_-SINEAluAluSx
CAediting_807477chr11_46021162_-SINEAluAluJr
CAediting_807478chr11_46021607_-SINEAluAluJr
CAediting_807479chr11_46021613_-SINEAluAluJr
CAediting_807480chr11_46021653_-SINEAluAluJr
CAediting_807481chr11_46021706_-SINEAluAluJr
CAediting_807482chr11_46021751_-SINEAluAluJr
CAediting_807483chr11_46021782_-SINEAluAluJr
CAediting_807484chr11_46021783_-SINEAluAluJr
CAediting_807485chr11_46021849_-SINEAluAluJr
CAediting_807486chr11_46022235_-SINEAluAluJr
CAediting_807487chr11_46022285_-SINEAluAluJr
CAediting_807488chr11_46022342_-SINEAluAluJr
CAediting_807489chr11_46022373_-SINEAluAluJr
CAediting_807490chr11_46022403_-SINEAluAluJr
CAediting_807491chr11_46022504_-SINEAluAluJo
CAediting_807492chr11_46022910_-SINEAluAluSx
CAediting_807493chr11_46022918_-SINEAluAluSx
CAediting_807494chr11_46022988_-SINEAluAluSx
CAediting_807495chr11_46022997_-SINEAluAluSx
CAediting_807496chr11_46028650_-SINEAluAluSx1
CAediting_807497chr11_46028698_-SINEAluAluSx1
CAediting_807498chr11_46028702_-SINEAluAluSx1
CAediting_807499chr11_46028711_-SINEAluAluSx1
CAediting_807500chr11_46028747_-SINEAluAluSx1
CAediting_807501chr11_46028749_-SINEAluAluSx1
CAediting_807502chr11_46028750_-SINEAluAluSx1
CAediting_807503chr11_46028751_-SINEAluAluSx1
CAediting_807504chr11_46028752_-SINEAluAluSx1
CAediting_807505chr11_46028753_-SINEAluAluSx1
CAediting_807506chr11_46028756_-SINEAluAluSx1
CAediting_807507chr11_46028762_-SINEAluAluSx1
CAediting_807508chr11_46028767_-SINEAluAluSx1
CAediting_807509chr11_46028781_-SINEAluAluSx1
CAediting_807510chr11_46028790_-SINEAluAluSx1
CAediting_807511chr11_46028791_-SINEAluAluSx1
CAediting_807512chr11_46028839_-SINEAluAluSx1
CAediting_807513chr11_46028844_-SINEAluAluSx1
CAediting_807514chr11_46028845_-SINEAluAluSx1
CAediting_807515chr11_46029437_-SINEAluAluSz
CAediting_807516chr11_46029564_-SINEAluAluSz
CAediting_807517chr11_46029566_-SINEAluAluSz
CAediting_807518chr11_46029588_-SINEAluAluSz
CAediting_807519chr11_46036966_-SINEAluAluJr
CAediting_807520chr11_46038129_-SINEAluAluSz
CAediting_807521chr11_46038203_-SINEAluAluSz
CAediting_807522chr11_46038251_-SINEAluAluSz
CAediting_807523chr11_46038276_-SINEAluAluSz
CAediting_807524chr11_46038401_-SINEAluAluSz
CAediting_807525chr11_46059546_-SINEAluAluJr4
CAediting_807526chr11_46059572_-SINEAluAluJr4
CAediting_807527chr11_46059607_-SINEAluAluJr4
CAediting_807528chr11_46059809_-SINEAluAluSx1
CAediting_807529chr11_46059947_-SINEAluAluSx1
CAediting_807530chr11_46066637_-SINEAluAluJr
CAediting_807531chr11_46073139_-SINEAluAluY
CAediting_807532chr11_46073265_-SINEAluAluY
CAediting_807533chr11_46074667_-SINEAluAluSx
CAediting_807534chr11_46074679_-SINEAluAluSx
CAediting_807535chr11_46074698_-SINEAluAluSx
CAediting_807536chr11_46092788_-SINEAluAluJb
CAediting_807537chr11_46092855_-SINEAluAluJb
CAediting_807538chr11_46092882_-SINEAluAluJb
CAediting_807539chr11_46092890_-SINEAluAluJb
CAediting_807540chr11_46092904_-SINEAluAluJb
CAediting_807541chr11_46101734_-SINEAluAluJb
CAediting_807542chr11_46101950_-SINEAluAluSc5
CAediting_807543chr11_46101982_-SINEAluAluSc5
CAediting_807544chr11_46101986_-SINEAluAluSc5
CAediting_807545chr11_46109840_-SINEAluAluSz
CAediting_807546chr11_46109858_-SINEAluAluSz
CAediting_807547chr11_46109868_-SINEAluAluSz
CAediting_807548chr11_46109905_-SINEAluAluSz
CAediting_807549chr11_46111474_-SINEAluAluSz
CAediting_807550chr11_46121068_-Simple_repeatSimple_repeat(GCT)n

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RNA A-to-I editing events in the alternative splicing sites for PHF21A

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000135365.14.PHF21A.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000135365.14.PHF21A.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PHF21A

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PHF21A

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for PHF21A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1306324chr19_13836464_-ENSG00000135365.14ENST00000532883hsa-miR-27a-3p45971298459713047mer-m84597129745971317158-15.89
CAediting_1229414chr17_67471546_+ENSG00000135365.14ENST00000323180hsa-miR-548aa45932678459326836mer4593267745932701148-16.89
CAediting_1160181chr17_7017644_-ENSG00000135365.14ENST00000323180hsa-miR-195-3p45932638459326447mer-m84593263745932658144-9.84
CAediting_77128chr1_85133844_+ENSG00000135365.14ENST00000323180hsa-miR-4423-3p45933445459334517mer-m84593344445933464140-12.68
CAediting_442554chr5_154685830_+ENSG00000135365.14ENST00000323180hsa-miR-130345933196459332027mer-m84593319545933216150-19.02
CAediting_77128chr1_85133844_+ENSG00000135365.14ENST00000530587hsa-miR-4423-3p45933445459334517mer-m84593344445933464140-12.68
CAediting_442554chr5_154685830_+ENSG00000135365.14ENST00000530587hsa-miR-130345934115459341228mer-1a4593411545934139149-19.45
CAediting_442554chr5_154685830_+ENSG00000135365.14ENST00000530587hsa-miR-130345934077459340837mer-m84593407645934096149-19.98
CAediting_442554chr5_154685830_+ENSG00000135365.14ENST00000525676hsa-miR-130345934077459340837mer-m84593407645934096149-19.98

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_468389chr6_31355314_-ENSG00000135365.14ENST00000323180hsa-miR-6891-5p45933253459332586mer4593324845933266145-25.68

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PHF21A

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for PHF21A

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for PHF21A

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for PHF21A

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for PHF21A

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PHF21A

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
PHF21AC1832588Chromosome 11p11.2 Deletion Syndrome2GENOMICS_ENGLAND;ORPHANET
PHF21AC0036421Systemic Scleroderma1GENOMICS_ENGLAND
PHF21AC1849193PEELING SKIN SYNDROME1GENOMICS_ENGLAND
PHF21AC3714756Intellectual Disability1GENOMICS_ENGLAND
PHF21AC4721610Carcinoma, Ovarian Epithelial1CTD_human