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Editing gene: C1RL (CAeditome ID:51279)

Gene summary for C1RL

Gene summary

Gene information	Gene symbol	C1RL
	Gene ID	51279
	Gene name	complement C1r subcomponent like
	Synonyms	C1RL1\|C1RLP\|C1r-LP\|CLSPa
	Cytomap	12p13.31
	Type of gene	protein-coding
	Description	complement C1r subcomponent-like proteinC1r-like proteinC1r-like serine protease analog proteincomplement C1r-like proteinasecomplement component 1, r subcomponent-like
	Modification date	20210518
	UniProtAcc	Q9NZP8
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for C1RL

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000139178.9

RNA A-to-I editing events in Cancer.

CAediting_865917(7094767, -), CAediting_865918(7094786, -), CAediting_865919(7094787, -), CAediting_865920(7094797, -), CAediting_865921(7094822, -), CAediting_865922(7094824, -), CAediting_865923(7094825, -), CAediting_865924(7094838, -), CAediting_865925(7094842, -), CAediting_865926(7095139, -), CAediting_865927(7095168, -), CAediting_865928(7095181, -), CAediting_865929(7095183, -), CAediting_865930(7095188, -), CAediting_865931(7095212, -), CAediting_865932(7095213, -), CAediting_865933(7095221, -), CAediting_865934(7095227, -), CAediting_865935(7095237, -), CAediting_865936(7095248, -), CAediting_865937(7095254, -), CAediting_865938(7095280, -), CAediting_865939(7095284, -), CAediting_865940(7095298, -), CAediting_865941(7095304, -), CAediting_865942(7095309, -), CAediting_865943(7095311, -), CAediting_865944(7095317, -), CAediting_865945(7095319, -), CAediting_865946(7095320, -), CAediting_865947(7095343, -), CAediting_865948(7095348, -), CAediting_865949(7095351, -), CAediting_865950(7095364, -), CAediting_865951(7095373, -), CAediting_865952(7095387, -), CAediting_865953(7095403, -), CAediting_865954(7096567, -), CAediting_865955(7097302, -), CAediting_865956(7097309, -), CAediting_865957(7097310, -), CAediting_865958(7097317, -), CAediting_865959(7097321, -), CAediting_865960(7097330, -), CAediting_865961(7097340, -), CAediting_865962(7097350, -), CAediting_865963(7097355, -), CAediting_865964(7097359, -), CAediting_865965(7097366, -), CAediting_865966(7097372, -), CAediting_865967(7097375, -), CAediting_865968(7097380, -), CAediting_865969(7097388, -), CAediting_865970(7097391, -), CAediting_865971(7097401, -), CAediting_865972(7097412, -), CAediting_865973(7097417, -), CAediting_865974(7097418, -), CAediting_865975(7097434, -), CAediting_865976(7097444, -), CAediting_865977(7097447, -), CAediting_865978(7097448, -), CAediting_865979(7097449, -), CAediting_865980(7097450, -), CAediting_865981(7097455, -), CAediting_865982(7097457, -), CAediting_865983(7097458, -), CAediting_865984(7097459, -), CAediting_865985(7097460, -), CAediting_865986(7097461, -), CAediting_865987(7097462, -), CAediting_865988(7097465, -), CAediting_865989(7097476, -), CAediting_865990(7097477, -), CAediting_865991(7097478, -), CAediting_865992(7097481, -), CAediting_865993(7097484, -), CAediting_865994(7097496, -), CAediting_865995(7097501, -), CAediting_865996(7097507, -), CAediting_865997(7097510, -), CAediting_865998(7097515, -), CAediting_865999(7097521, -), CAediting_866000(7097532, -), CAediting_866001(7097534, -), CAediting_866002(7097538, -), CAediting_866003(7097546, -), CAediting_866004(7097549, -), CAediting_866005(7097554, -), CAediting_866006(7097555, -), CAediting_866007(7097563, -), CAediting_866008(7097577, -), CAediting_866009(7097593, -), CAediting_866010(7097595, -), CAediting_866011(7097596, -), CAediting_866012(7097967, -), CAediting_866013(7097983, -), CAediting_866014(7098009, -), CAediting_866015(7098011, -), CAediting_866016(7098014, -), CAediting_866017(7098023, -), CAediting_866018(7098025, -), CAediting_866019(7098046, -), CAediting_866020(7098054, -), CAediting_866021(7098078, -), CAediting_866022(7098086, -), CAediting_866023(7098100, -), CAediting_866024(7098103, -), CAediting_866025(7098110, -), CAediting_866026(7098122, -), CAediting_866027(7098123, -), CAediting_866028(7098133, -), CAediting_866029(7098136, -), CAediting_866030(7098147, -), CAediting_866031(7098149, -), CAediting_866032(7098159, -), CAediting_866033(7098171, -), CAediting_866034(7098184, -), CAediting_866035(7098188, -), CAediting_866036(7098189, -), CAediting_866037(7098208, -), CAediting_866038(7098209, -), CAediting_866039(7098214, -), CAediting_866040(7098224, -), CAediting_866041(7098233, -), CAediting_866042(7098238, -), CAediting_866043(7098245, -), CAediting_866044(7098263, -), CAediting_866045(7098267, -), CAediting_866046(7098269, -), CAediting_866047(7098653, -), CAediting_866048(7098671, -), CAediting_866049(7098917, -), CAediting_866050(7098926, -), CAediting_866051(7098937, -), CAediting_866052(7098939, -), CAediting_866053(7098951, -), CAediting_866054(7098952, -), CAediting_866055(7098961, -), CAediting_866056(7098979, -), CAediting_866057(7098984, -), CAediting_866058(7098991, -), CAediting_866059(7099004, -), CAediting_866060(7099024, -), CAediting_866061(7099030, -), CAediting_866062(7099033, -), CAediting_866063(7099101, -), CAediting_866064(7099103, -), CAediting_866065(7099113, -), CAediting_866066(7099125, -), CAediting_866067(7099138, -), CAediting_866068(7099142, -), CAediting_866069(7099163, -), CAediting_866070(7099168, -), CAediting_866071(7099178, -), CAediting_866072(7099179, -), CAediting_866073(7099181, -), CAediting_866074(7099186, -), CAediting_866075(7099187, -), CAediting_866076(7099192, -), CAediting_866077(7099197, -), CAediting_866078(7099199, -), CAediting_866079(7099222, -), CAediting_866080(7100528, -), CAediting_866081(7100543, -), CAediting_866082(7100550, -), CAediting_866083(7100559, -), CAediting_866084(7100577, -), CAediting_866085(7100582, -), CAediting_866086(7100589, -), CAediting_866087(7100590, -), CAediting_866088(7100591, -), CAediting_866089(7100602, -), CAediting_866090(7100622, -), CAediting_866091(7100625, -), CAediting_866092(7100649, -), CAediting_866093(7100654, -), CAediting_866094(7100663, -), CAediting_866095(7100675, -), CAediting_866096(7100687, -), CAediting_866097(7100704, -), CAediting_866098(7100779, -), CAediting_866099(7100781, -), CAediting_866100(7100783, -), CAediting_866101(7100785, -), CAediting_866102(7101364, -), CAediting_866103(7101368, -), CAediting_866104(7101385, -), CAediting_866105(7101389, -), CAediting_866106(7101393, -), CAediting_866107(7101407, -), CAediting_866108(7101413, -), CAediting_866109(7101433, -), CAediting_866110(7101469, -), CAediting_866111(7101471, -), CAediting_866112(7101486, -), CAediting_866113(7101488, -), CAediting_866114(7101494, -), CAediting_866115(7101497, -), CAediting_866116(7101502, -), CAediting_866117(7101512, -), CAediting_866118(7101520, -), CAediting_866119(7101526, -), CAediting_866120(7101527, -), CAediting_866121(7101543, -), CAediting_866122(7101559, -), CAediting_866123(7105284, -), CAediting_866124(7105342, -), CAediting_866125(7105343, -), CAediting_866126(7105366, -), CAediting_866127(7105367, -), CAediting_866128(7105379, -), CAediting_866129(7105381, -), CAediting_866130(7105407, -), CAediting_866131(7105543, -), CAediting_866132(7107204, -), CAediting_866133(7107266, -), CAediting_866134(7107271, -), CAediting_866135(7107279, -), CAediting_866136(7107283, -), CAediting_866137(7107284, -), CAediting_866138(7107333, -), CAediting_866139(7107393, -), CAediting_866140(7107397, -), CAediting_866141(7107415, -), CAediting_866142(7107443, -), CAediting_866143(7107456, -),

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RNA editing positional annotations for C1RL using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_865954	chr12_7096567_-	nonsynonymous SNV	ENST00000266542.7	c.A1288G	p.S430G	D	P	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_865917	chr12_7094767_-	ncRNA_exonic
CAediting_865918	chr12_7094786_-	ncRNA_exonic
CAediting_865919	chr12_7094787_-	ncRNA_exonic
CAediting_865920	chr12_7094797_-	ncRNA_exonic
CAediting_865921	chr12_7094822_-	ncRNA_exonic
CAediting_865922	chr12_7094824_-	ncRNA_exonic
CAediting_865923	chr12_7094825_-	ncRNA_exonic
CAediting_865924	chr12_7094838_-	ncRNA_exonic
CAediting_865925	chr12_7094842_-	ncRNA_exonic
CAediting_865926	chr12_7095139_-	ncRNA_exonic
CAediting_865927	chr12_7095168_-	ncRNA_exonic
CAediting_865928	chr12_7095181_-	ncRNA_exonic
CAediting_865929	chr12_7095183_-	ncRNA_exonic
CAediting_865930	chr12_7095188_-	ncRNA_exonic
CAediting_865931	chr12_7095212_-	ncRNA_exonic
CAediting_865932	chr12_7095213_-	ncRNA_exonic
CAediting_865933	chr12_7095221_-	ncRNA_exonic
CAediting_865934	chr12_7095227_-	ncRNA_splicing
CAediting_865935	chr12_7095237_-	ncRNA_intronic
CAediting_865936	chr12_7095248_-	ncRNA_intronic
CAediting_865937	chr12_7095254_-	ncRNA_intronic
CAediting_865938	chr12_7095280_-	ncRNA_intronic
CAediting_865939	chr12_7095284_-	ncRNA_intronic
CAediting_865940	chr12_7095298_-	ncRNA_intronic
CAediting_865941	chr12_7095304_-	ncRNA_intronic
CAediting_865942	chr12_7095309_-	ncRNA_intronic
CAediting_865943	chr12_7095311_-	ncRNA_intronic
CAediting_865944	chr12_7095317_-	ncRNA_intronic
CAediting_865945	chr12_7095319_-	ncRNA_intronic
CAediting_865946	chr12_7095320_-	ncRNA_intronic
CAediting_865947	chr12_7095343_-	ncRNA_intronic
CAediting_865948	chr12_7095348_-	ncRNA_intronic
CAediting_865949	chr12_7095351_-	ncRNA_intronic
CAediting_865950	chr12_7095364_-	ncRNA_intronic
CAediting_865951	chr12_7095373_-	ncRNA_intronic
CAediting_865952	chr12_7095387_-	ncRNA_intronic
CAediting_865953	chr12_7095403_-	ncRNA_intronic
CAediting_865954	chr12_7096567_-	exonic
CAediting_865955	chr12_7097302_-	intronic
CAediting_865956	chr12_7097309_-	intronic
CAediting_865957	chr12_7097310_-	intronic
CAediting_865958	chr12_7097317_-	intronic
CAediting_865959	chr12_7097321_-	intronic
CAediting_865960	chr12_7097330_-	intronic
CAediting_865961	chr12_7097340_-	intronic
CAediting_865962	chr12_7097350_-	intronic
CAediting_865963	chr12_7097355_-	intronic
CAediting_865964	chr12_7097359_-	intronic
CAediting_865965	chr12_7097366_-	intronic
CAediting_865966	chr12_7097372_-	intronic
CAediting_865967	chr12_7097375_-	intronic
CAediting_865968	chr12_7097380_-	intronic
CAediting_865969	chr12_7097388_-	intronic
CAediting_865970	chr12_7097391_-	intronic
CAediting_865971	chr12_7097401_-	intronic
CAediting_865972	chr12_7097412_-	intronic
CAediting_865973	chr12_7097417_-	intronic
CAediting_865974	chr12_7097418_-	intronic
CAediting_865975	chr12_7097434_-	intronic
CAediting_865976	chr12_7097444_-	intronic
CAediting_865977	chr12_7097447_-	intronic
CAediting_865978	chr12_7097448_-	intronic
CAediting_865979	chr12_7097449_-	intronic
CAediting_865980	chr12_7097450_-	intronic
CAediting_865981	chr12_7097455_-	intronic
CAediting_865982	chr12_7097457_-	intronic
CAediting_865983	chr12_7097458_-	intronic
CAediting_865984	chr12_7097459_-	intronic
CAediting_865985	chr12_7097460_-	intronic
CAediting_865986	chr12_7097461_-	intronic
CAediting_865987	chr12_7097462_-	intronic
CAediting_865988	chr12_7097465_-	intronic
CAediting_865989	chr12_7097476_-	intronic
CAediting_865990	chr12_7097477_-	intronic
CAediting_865991	chr12_7097478_-	intronic
CAediting_865992	chr12_7097481_-	intronic
CAediting_865993	chr12_7097484_-	intronic
CAediting_865994	chr12_7097496_-	intronic
CAediting_865995	chr12_7097501_-	intronic
CAediting_865996	chr12_7097507_-	intronic
CAediting_865997	chr12_7097510_-	intronic
CAediting_865998	chr12_7097515_-	intronic
CAediting_865999	chr12_7097521_-	intronic
CAediting_866000	chr12_7097532_-	intronic
CAediting_866001	chr12_7097534_-	intronic
CAediting_866002	chr12_7097538_-	intronic
CAediting_866003	chr12_7097546_-	intronic
CAediting_866004	chr12_7097549_-	intronic
CAediting_866005	chr12_7097554_-	intronic
CAediting_866006	chr12_7097555_-	intronic
CAediting_866007	chr12_7097563_-	intronic
CAediting_866008	chr12_7097577_-	intronic
CAediting_866009	chr12_7097593_-	intronic
CAediting_866010	chr12_7097595_-	intronic
CAediting_866011	chr12_7097596_-	intronic
CAediting_866012	chr12_7097967_-	intronic
CAediting_866013	chr12_7097983_-	intronic
CAediting_866014	chr12_7098009_-	intronic
CAediting_866015	chr12_7098011_-	intronic
CAediting_866016	chr12_7098014_-	intronic
CAediting_866017	chr12_7098023_-	intronic
CAediting_866018	chr12_7098025_-	intronic
CAediting_866019	chr12_7098046_-	intronic
CAediting_866020	chr12_7098054_-	intronic
CAediting_866021	chr12_7098078_-	intronic
CAediting_866022	chr12_7098086_-	intronic
CAediting_866023	chr12_7098100_-	intronic
CAediting_866024	chr12_7098103_-	intronic
CAediting_866025	chr12_7098110_-	intronic
CAediting_866026	chr12_7098122_-	intronic
CAediting_866027	chr12_7098123_-	intronic
CAediting_866028	chr12_7098133_-	intronic
CAediting_866029	chr12_7098136_-	intronic
CAediting_866030	chr12_7098147_-	intronic
CAediting_866031	chr12_7098149_-	intronic
CAediting_866032	chr12_7098159_-	intronic
CAediting_866033	chr12_7098171_-	intronic
CAediting_866034	chr12_7098184_-	intronic
CAediting_866035	chr12_7098188_-	intronic
CAediting_866036	chr12_7098189_-	intronic
CAediting_866037	chr12_7098208_-	intronic
CAediting_866038	chr12_7098209_-	intronic
CAediting_866039	chr12_7098214_-	intronic
CAediting_866040	chr12_7098224_-	intronic
CAediting_866041	chr12_7098233_-	intronic
CAediting_866042	chr12_7098238_-	intronic
CAediting_866043	chr12_7098245_-	intronic
CAediting_866044	chr12_7098263_-	intronic
CAediting_866045	chr12_7098267_-	intronic
CAediting_866046	chr12_7098269_-	intronic
CAediting_866047	chr12_7098653_-	intronic
CAediting_866048	chr12_7098671_-	intronic
CAediting_866049	chr12_7098917_-	intronic
CAediting_866050	chr12_7098926_-	intronic
CAediting_866051	chr12_7098937_-	intronic
CAediting_866052	chr12_7098939_-	intronic
CAediting_866053	chr12_7098951_-	intronic
CAediting_866054	chr12_7098952_-	intronic
CAediting_866055	chr12_7098961_-	intronic
CAediting_866056	chr12_7098979_-	intronic
CAediting_866057	chr12_7098984_-	intronic
CAediting_866058	chr12_7098991_-	intronic
CAediting_866059	chr12_7099004_-	intronic
CAediting_866060	chr12_7099024_-	intronic
CAediting_866061	chr12_7099030_-	intronic
CAediting_866062	chr12_7099033_-	intronic
CAediting_866063	chr12_7099101_-	intronic
CAediting_866064	chr12_7099103_-	intronic
CAediting_866065	chr12_7099113_-	intronic
CAediting_866066	chr12_7099125_-	intronic
CAediting_866067	chr12_7099138_-	intronic
CAediting_866068	chr12_7099142_-	intronic
CAediting_866069	chr12_7099163_-	intronic
CAediting_866070	chr12_7099168_-	intronic
CAediting_866071	chr12_7099178_-	intronic
CAediting_866072	chr12_7099179_-	intronic
CAediting_866073	chr12_7099181_-	intronic
CAediting_866074	chr12_7099186_-	intronic
CAediting_866075	chr12_7099187_-	intronic
CAediting_866076	chr12_7099192_-	intronic
CAediting_866077	chr12_7099197_-	intronic
CAediting_866078	chr12_7099199_-	intronic
CAediting_866079	chr12_7099222_-	intronic
CAediting_866080	chr12_7100528_-	intronic
CAediting_866081	chr12_7100543_-	intronic
CAediting_866082	chr12_7100550_-	intronic
CAediting_866083	chr12_7100559_-	intronic
CAediting_866084	chr12_7100577_-	intronic
CAediting_866085	chr12_7100582_-	intronic
CAediting_866086	chr12_7100589_-	intronic
CAediting_866087	chr12_7100590_-	intronic
CAediting_866088	chr12_7100591_-	intronic
CAediting_866089	chr12_7100602_-	intronic
CAediting_866090	chr12_7100622_-	intronic
CAediting_866091	chr12_7100625_-	intronic
CAediting_866092	chr12_7100649_-	intronic
CAediting_866093	chr12_7100654_-	intronic
CAediting_866094	chr12_7100663_-	intronic
CAediting_866095	chr12_7100675_-	intronic
CAediting_866096	chr12_7100687_-	intronic
CAediting_866097	chr12_7100704_-	intronic
CAediting_866098	chr12_7100779_-	intronic
CAediting_866099	chr12_7100781_-	intronic
CAediting_866100	chr12_7100783_-	intronic
CAediting_866101	chr12_7100785_-	intronic
CAediting_866102	chr12_7101364_-	intronic
CAediting_866103	chr12_7101368_-	intronic
CAediting_866104	chr12_7101385_-	intronic
CAediting_866105	chr12_7101389_-	intronic
CAediting_866106	chr12_7101393_-	intronic
CAediting_866107	chr12_7101407_-	intronic
CAediting_866108	chr12_7101413_-	intronic
CAediting_866109	chr12_7101433_-	intronic
CAediting_866110	chr12_7101469_-	intronic
CAediting_866111	chr12_7101471_-	intronic
CAediting_866112	chr12_7101486_-	intronic
CAediting_866113	chr12_7101488_-	intronic
CAediting_866114	chr12_7101494_-	intronic
CAediting_866115	chr12_7101497_-	intronic
CAediting_866116	chr12_7101502_-	intronic
CAediting_866117	chr12_7101512_-	intronic
CAediting_866118	chr12_7101520_-	intronic
CAediting_866119	chr12_7101526_-	intronic
CAediting_866120	chr12_7101527_-	intronic
CAediting_866121	chr12_7101543_-	intronic
CAediting_866122	chr12_7101559_-	intronic
CAediting_866123	chr12_7105284_-	ncRNA_intronic
CAediting_866124	chr12_7105342_-	ncRNA_intronic
CAediting_866125	chr12_7105343_-	ncRNA_intronic
CAediting_866126	chr12_7105366_-	ncRNA_intronic
CAediting_866127	chr12_7105367_-	ncRNA_intronic
CAediting_866128	chr12_7105379_-	ncRNA_intronic
CAediting_866129	chr12_7105381_-	ncRNA_intronic
CAediting_866130	chr12_7105407_-	ncRNA_intronic
CAediting_866131	chr12_7105543_-	ncRNA_intronic
CAediting_866132	chr12_7107204_-	ncRNA_intronic
CAediting_866133	chr12_7107266_-	ncRNA_intronic
CAediting_866134	chr12_7107271_-	ncRNA_intronic
CAediting_866135	chr12_7107279_-	ncRNA_intronic
CAediting_866136	chr12_7107283_-	ncRNA_intronic
CAediting_866137	chr12_7107284_-	ncRNA_intronic
CAediting_866138	chr12_7107333_-	ncRNA_intronic
CAediting_866139	chr12_7107393_-	ncRNA_intronic
CAediting_866140	chr12_7107397_-	ncRNA_intronic
CAediting_866141	chr12_7107415_-	ncRNA_intronic
CAediting_866142	chr12_7107443_-	ncRNA_intronic
CAediting_866143	chr12_7107456_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_865917	chr12_7094767_-	SINE	Alu	FLAM_A
CAediting_865918	chr12_7094786_-	SINE	Alu	FLAM_A
CAediting_865919	chr12_7094787_-	SINE	Alu	FLAM_A
CAediting_865920	chr12_7094797_-	SINE	Alu	FLAM_A
CAediting_865921	chr12_7094822_-	SINE	Alu	FLAM_A
CAediting_865922	chr12_7094824_-	SINE	Alu	FLAM_A
CAediting_865923	chr12_7094825_-	SINE	Alu	FLAM_A
CAediting_865924	chr12_7094838_-	SINE	Alu	FLAM_A
CAediting_865925	chr12_7094842_-	SINE	Alu	FLAM_A
CAediting_865926	chr12_7095139_-	SINE	Alu	AluSc
CAediting_865927	chr12_7095168_-	SINE	Alu	AluSc
CAediting_865928	chr12_7095181_-	SINE	Alu	AluSc
CAediting_865929	chr12_7095183_-	SINE	Alu	AluSc
CAediting_865930	chr12_7095188_-	SINE	Alu	AluSc
CAediting_865931	chr12_7095212_-	SINE	Alu	AluSc
CAediting_865932	chr12_7095213_-	SINE	Alu	AluSc
CAediting_865933	chr12_7095221_-	SINE	Alu	AluSc
CAediting_865934	chr12_7095227_-	SINE	Alu	AluSc
CAediting_865935	chr12_7095237_-	SINE	Alu	AluSc
CAediting_865936	chr12_7095248_-	SINE	Alu	AluSc
CAediting_865937	chr12_7095254_-	SINE	Alu	AluSc
CAediting_865938	chr12_7095280_-	SINE	Alu	AluSc
CAediting_865939	chr12_7095284_-	SINE	Alu	AluSc
CAediting_865940	chr12_7095298_-	SINE	Alu	AluSc
CAediting_865941	chr12_7095304_-	SINE	Alu	AluSc
CAediting_865942	chr12_7095309_-	SINE	Alu	AluSc
CAediting_865943	chr12_7095311_-	SINE	Alu	AluSc
CAediting_865944	chr12_7095317_-	SINE	Alu	AluSc
CAediting_865945	chr12_7095319_-	SINE	Alu	AluSc
CAediting_865946	chr12_7095320_-	SINE	Alu	AluSc
CAediting_865947	chr12_7095343_-	SINE	Alu	AluSc
CAediting_865948	chr12_7095348_-	SINE	Alu	AluSc
CAediting_865949	chr12_7095351_-	SINE	Alu	AluSc
CAediting_865950	chr12_7095364_-	SINE	Alu	AluSc
CAediting_865951	chr12_7095373_-	SINE	Alu	AluSc
CAediting_865952	chr12_7095387_-	SINE	Alu	AluSc
CAediting_865953	chr12_7095403_-	SINE	Alu	AluSc
CAediting_865955	chr12_7097302_-	SINE	Alu	AluSq
CAediting_865956	chr12_7097309_-	SINE	Alu	AluSq
CAediting_865957	chr12_7097310_-	SINE	Alu	AluSq
CAediting_865958	chr12_7097317_-	SINE	Alu	AluSq
CAediting_865959	chr12_7097321_-	SINE	Alu	AluSq
CAediting_865960	chr12_7097330_-	SINE	Alu	AluSq
CAediting_865961	chr12_7097340_-	SINE	Alu	AluSq
CAediting_865962	chr12_7097350_-	SINE	Alu	AluSq
CAediting_865963	chr12_7097355_-	SINE	Alu	AluSq
CAediting_865964	chr12_7097359_-	SINE	Alu	AluSq
CAediting_865965	chr12_7097366_-	SINE	Alu	AluSq
CAediting_865966	chr12_7097372_-	SINE	Alu	AluSq
CAediting_865967	chr12_7097375_-	SINE	Alu	AluSq
CAediting_865968	chr12_7097380_-	SINE	Alu	AluSq
CAediting_865969	chr12_7097388_-	SINE	Alu	AluSq
CAediting_865970	chr12_7097391_-	SINE	Alu	AluSq
CAediting_865971	chr12_7097401_-	SINE	Alu	AluSq
CAediting_865972	chr12_7097412_-	SINE	Alu	AluSq
CAediting_865973	chr12_7097417_-	SINE	Alu	AluSq
CAediting_865974	chr12_7097418_-	SINE	Alu	AluSq
CAediting_865975	chr12_7097434_-	SINE	Alu	AluSq
CAediting_865976	chr12_7097444_-	SINE	Alu	AluSq
CAediting_865977	chr12_7097447_-	SINE	Alu	AluSq
CAediting_865978	chr12_7097448_-	SINE	Alu	AluSq
CAediting_865979	chr12_7097449_-	SINE	Alu	AluSq
CAediting_865980	chr12_7097450_-	SINE	Alu	AluSq
CAediting_865981	chr12_7097455_-	SINE	Alu	AluSq
CAediting_865982	chr12_7097457_-	SINE	Alu	AluSq
CAediting_865983	chr12_7097458_-	SINE	Alu	AluSq
CAediting_865984	chr12_7097459_-	SINE	Alu	AluSq
CAediting_865985	chr12_7097460_-	SINE	Alu	AluSq
CAediting_865986	chr12_7097461_-	SINE	Alu	AluSq
CAediting_865987	chr12_7097462_-	SINE	Alu	AluSq
CAediting_865988	chr12_7097465_-	SINE	Alu	AluSq
CAediting_865989	chr12_7097476_-	SINE	Alu	AluSq
CAediting_865990	chr12_7097477_-	SINE	Alu	AluSq
CAediting_865991	chr12_7097478_-	SINE	Alu	AluSq
CAediting_865992	chr12_7097481_-	SINE	Alu	AluSq
CAediting_865993	chr12_7097484_-	SINE	Alu	AluSq
CAediting_865994	chr12_7097496_-	SINE	Alu	AluSq
CAediting_865995	chr12_7097501_-	SINE	Alu	AluSq
CAediting_865996	chr12_7097507_-	SINE	Alu	AluSq
CAediting_865997	chr12_7097510_-	SINE	Alu	AluSq
CAediting_865998	chr12_7097515_-	SINE	Alu	AluSq
CAediting_865999	chr12_7097521_-	SINE	Alu	AluSq
CAediting_866000	chr12_7097532_-	SINE	Alu	AluSq
CAediting_866001	chr12_7097534_-	SINE	Alu	AluSq
CAediting_866002	chr12_7097538_-	SINE	Alu	AluSq
CAediting_866003	chr12_7097546_-	SINE	Alu	AluSq
CAediting_866004	chr12_7097549_-	SINE	Alu	AluSq
CAediting_866005	chr12_7097554_-	SINE	Alu	AluSq
CAediting_866006	chr12_7097555_-	SINE	Alu	AluSq
CAediting_866007	chr12_7097563_-	SINE	Alu	AluSq
CAediting_866008	chr12_7097577_-	SINE	Alu	AluSq
CAediting_866014	chr12_7098009_-	SINE	Alu	AluY
CAediting_866015	chr12_7098011_-	SINE	Alu	AluY
CAediting_866016	chr12_7098014_-	SINE	Alu	AluY
CAediting_866017	chr12_7098023_-	SINE	Alu	AluY
CAediting_866018	chr12_7098025_-	SINE	Alu	AluY
CAediting_866019	chr12_7098046_-	SINE	Alu	AluY
CAediting_866020	chr12_7098054_-	SINE	Alu	AluY
CAediting_866021	chr12_7098078_-	SINE	Alu	AluY
CAediting_866022	chr12_7098086_-	SINE	Alu	AluY
CAediting_866023	chr12_7098100_-	SINE	Alu	AluY
CAediting_866024	chr12_7098103_-	SINE	Alu	AluY
CAediting_866025	chr12_7098110_-	SINE	Alu	AluY
CAediting_866026	chr12_7098122_-	SINE	Alu	AluY
CAediting_866027	chr12_7098123_-	SINE	Alu	AluY
CAediting_866028	chr12_7098133_-	SINE	Alu	AluY
CAediting_866029	chr12_7098136_-	SINE	Alu	AluY
CAediting_866030	chr12_7098147_-	SINE	Alu	AluY
CAediting_866031	chr12_7098149_-	SINE	Alu	AluY
CAediting_866032	chr12_7098159_-	SINE	Alu	AluY
CAediting_866033	chr12_7098171_-	SINE	Alu	AluY
CAediting_866034	chr12_7098184_-	SINE	Alu	AluY
CAediting_866035	chr12_7098188_-	SINE	Alu	AluY
CAediting_866036	chr12_7098189_-	SINE	Alu	AluY
CAediting_866037	chr12_7098208_-	SINE	Alu	AluY
CAediting_866038	chr12_7098209_-	SINE	Alu	AluY
CAediting_866039	chr12_7098214_-	SINE	Alu	AluY
CAediting_866040	chr12_7098224_-	SINE	Alu	AluY
CAediting_866041	chr12_7098233_-	SINE	Alu	AluY
CAediting_866042	chr12_7098238_-	SINE	Alu	AluY
CAediting_866043	chr12_7098245_-	SINE	Alu	AluY
CAediting_866044	chr12_7098263_-	SINE	Alu	AluY
CAediting_866045	chr12_7098267_-	SINE	Alu	AluY
CAediting_866046	chr12_7098269_-	SINE	Alu	AluY
CAediting_866047	chr12_7098653_-	LINE	L1	L1MB7
CAediting_866048	chr12_7098671_-	LINE	L1	L1MB7
CAediting_866049	chr12_7098917_-	SINE	Alu	AluSq2
CAediting_866050	chr12_7098926_-	SINE	Alu	AluSq2
CAediting_866051	chr12_7098937_-	SINE	Alu	AluSq2
CAediting_866052	chr12_7098939_-	SINE	Alu	AluSq2
CAediting_866053	chr12_7098951_-	SINE	Alu	AluSq2
CAediting_866054	chr12_7098952_-	SINE	Alu	AluSq2
CAediting_866055	chr12_7098961_-	SINE	Alu	AluSq2
CAediting_866056	chr12_7098979_-	SINE	Alu	AluSq2
CAediting_866057	chr12_7098984_-	SINE	Alu	AluSq2
CAediting_866058	chr12_7098991_-	SINE	Alu	AluSq2
CAediting_866059	chr12_7099004_-	SINE	Alu	AluSq2
CAediting_866060	chr12_7099024_-	SINE	Alu	AluSq2
CAediting_866061	chr12_7099030_-	SINE	Alu	AluSq2
CAediting_866062	chr12_7099033_-	SINE	Alu	AluSq2
CAediting_866063	chr12_7099101_-	SINE	Alu	AluSq2
CAediting_866064	chr12_7099103_-	SINE	Alu	AluSq2
CAediting_866065	chr12_7099113_-	SINE	Alu	AluSq2
CAediting_866066	chr12_7099125_-	SINE	Alu	AluSq2
CAediting_866067	chr12_7099138_-	SINE	Alu	AluSq2
CAediting_866068	chr12_7099142_-	SINE	Alu	AluSq2
CAediting_866069	chr12_7099163_-	SINE	Alu	AluSq2
CAediting_866070	chr12_7099168_-	SINE	Alu	AluSq2
CAediting_866071	chr12_7099178_-	SINE	Alu	AluSq2
CAediting_866072	chr12_7099179_-	SINE	Alu	AluSq2
CAediting_866073	chr12_7099181_-	SINE	Alu	AluSq2
CAediting_866074	chr12_7099186_-	SINE	Alu	AluSq2
CAediting_866075	chr12_7099187_-	SINE	Alu	AluSq2
CAediting_866076	chr12_7099192_-	SINE	Alu	AluSq2
CAediting_866077	chr12_7099197_-	SINE	Alu	AluSq2
CAediting_866078	chr12_7099199_-	SINE	Alu	AluSq2
CAediting_866079	chr12_7099222_-	SINE	Alu	AluSq2
CAediting_866080	chr12_7100528_-	SINE	Alu	AluSx
CAediting_866081	chr12_7100543_-	SINE	Alu	AluSx
CAediting_866082	chr12_7100550_-	SINE	Alu	AluSx
CAediting_866083	chr12_7100559_-	SINE	Alu	AluSx
CAediting_866084	chr12_7100577_-	SINE	Alu	AluSx
CAediting_866085	chr12_7100582_-	SINE	Alu	AluSx
CAediting_866086	chr12_7100589_-	SINE	Alu	AluSx
CAediting_866087	chr12_7100590_-	SINE	Alu	AluSx
CAediting_866088	chr12_7100591_-	SINE	Alu	AluSx
CAediting_866089	chr12_7100602_-	SINE	Alu	AluSx
CAediting_866090	chr12_7100622_-	SINE	Alu	AluSx
CAediting_866091	chr12_7100625_-	SINE	Alu	AluSx
CAediting_866092	chr12_7100649_-	SINE	Alu	AluSx
CAediting_866093	chr12_7100654_-	SINE	Alu	AluSx
CAediting_866094	chr12_7100663_-	SINE	Alu	AluSx
CAediting_866095	chr12_7100675_-	SINE	Alu	AluSx
CAediting_866096	chr12_7100687_-	SINE	Alu	AluSx
CAediting_866097	chr12_7100704_-	SINE	Alu	AluSx
CAediting_866098	chr12_7100779_-	SINE	Alu	AluSx
CAediting_866099	chr12_7100781_-	SINE	Alu	AluSx
CAediting_866100	chr12_7100783_-	SINE	Alu	AluSx
CAediting_866101	chr12_7100785_-	SINE	Alu	AluSx
CAediting_866102	chr12_7101364_-	SINE	Alu	AluJr
CAediting_866103	chr12_7101368_-	SINE	Alu	AluJr
CAediting_866104	chr12_7101385_-	SINE	Alu	AluJr
CAediting_866105	chr12_7101389_-	SINE	Alu	AluJr
CAediting_866106	chr12_7101393_-	SINE	Alu	AluJr
CAediting_866107	chr12_7101407_-	SINE	Alu	AluJr
CAediting_866108	chr12_7101413_-	SINE	Alu	AluJr
CAediting_866109	chr12_7101433_-	SINE	Alu	AluJr
CAediting_866110	chr12_7101469_-	SINE	Alu	AluJr
CAediting_866111	chr12_7101471_-	SINE	Alu	AluJr
CAediting_866112	chr12_7101486_-	SINE	Alu	AluJr
CAediting_866113	chr12_7101488_-	SINE	Alu	AluJr
CAediting_866114	chr12_7101494_-	SINE	Alu	AluJr
CAediting_866115	chr12_7101497_-	SINE	Alu	AluJr
CAediting_866116	chr12_7101502_-	SINE	Alu	AluJr
CAediting_866117	chr12_7101512_-	SINE	Alu	AluJr
CAediting_866118	chr12_7101520_-	SINE	Alu	AluJr
CAediting_866119	chr12_7101526_-	SINE	Alu	AluJr
CAediting_866120	chr12_7101527_-	SINE	Alu	AluJr
CAediting_866121	chr12_7101543_-	SINE	Alu	AluJr
CAediting_866122	chr12_7101559_-	SINE	Alu	AluJr
CAediting_866123	chr12_7105284_-	SINE	Alu	AluSx
CAediting_866124	chr12_7105342_-	SINE	Alu	AluSx
CAediting_866125	chr12_7105343_-	SINE	Alu	AluSx
CAediting_866126	chr12_7105366_-	SINE	Alu	AluSx
CAediting_866127	chr12_7105367_-	SINE	Alu	AluSx
CAediting_866128	chr12_7105379_-	SINE	Alu	AluSx
CAediting_866129	chr12_7105381_-	SINE	Alu	AluSx
CAediting_866130	chr12_7105407_-	SINE	Alu	AluSx
CAediting_866131	chr12_7105543_-	SINE	Alu	AluSx
CAediting_866132	chr12_7107204_-	SINE	Alu	AluJr
CAediting_866133	chr12_7107266_-	SINE	Alu	AluJr
CAediting_866134	chr12_7107271_-	SINE	Alu	AluJr
CAediting_866135	chr12_7107279_-	SINE	Alu	AluJr
CAediting_866136	chr12_7107283_-	SINE	Alu	AluJr
CAediting_866137	chr12_7107284_-	SINE	Alu	AluJr
CAediting_866138	chr12_7107333_-	SINE	Alu	AluJr
CAediting_866139	chr12_7107393_-	SINE	Alu	AluJr
CAediting_866140	chr12_7107397_-	SINE	Alu	AluJr
CAediting_866141	chr12_7107415_-	SINE	Alu	AluJr
CAediting_866142	chr12_7107443_-	SINE	Alu	AluJr
CAediting_866143	chr12_7107456_-	SINE	Alu	AluJr

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RNA A-to-I editing events in the alternative splicing sites for C1RL

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000139178.9.C1RL.

Correlation between RNA A-to-I editing and PSI for ENSG00000139178.9.C1RL.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for C1RL

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

BRCA.CAediting_865953.ENSG00000139178.C1RL.png
Soverview

KIRC.CAediting_865975.ENSG00000139178.C1RL.png
Soverview

STAD.CAediting_865999.ENSG00000139178.C1RL.png
Soverview

STAD.CAediting_866006.ENSG00000139178.C1RL.png
Soverview

STAD.CAediting_866008.ENSG00000139178.C1RL.png
Soverview

Top

Protein coding region RNA A-to-I editings for C1RL

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for C1RL

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_865919	chr12_7094787_-	ENSG00000139178.9	ENST00000266542	hsa-miR-3934-3p	7094783	7094790	8mer-1a	7094783	7094804	158.00	-24.38
CAediting_865931	chr12_7095212_-	ENSG00000139178.9	ENST00000266542	hsa-miR-3155a	7095208	7095214	7mer-m8	7095207	7095225	145.00	-24.35
CAediting_865931	chr12_7095212_-	ENSG00000139178.9	ENST00000266542	hsa-miR-3155b	7095208	7095214	7mer-m8	7095207	7095222	145.00	-23.45
CAediting_865931	chr12_7095212_-	ENSG00000139178.9	ENST00000266542	hsa-miR-484	7095208	7095214	7mer-m8	7095207	7095233	150.00	-24.63
CAediting_865932	chr12_7095213_-	ENSG00000139178.9	ENST00000266542	hsa-miR-9900	7095208	7095214	7mer-m8	7095207	7095226	155.00	-17.10
CAediting_865942	chr12_7095309_-	ENSG00000139178.9	ENST00000266542	hsa-miR-412-3p	7095309	7095315	7mer-m8	7095308	7095330	151.00	-16.53
CAediting_865942	chr12_7095309_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6754-3p	7095309	7095315	7mer-m8	7095308	7095328	144.00	-15.76
CAediting_865944	chr12_7095317_-	ENSG00000139178.9	ENST00000266542	hsa-miR-1306-3p	7095317	7095323	7mer-m8	7095316	7095333	156.00	-24.62
CAediting_865945	chr12_7095319_-	ENSG00000139178.9	ENST00000266542	hsa-miR-3190-5p	7095319	7095325	7mer-m8	7095318	7095337	145.00	-16.08
CAediting_865951	chr12_7095373_-	ENSG00000139178.9	ENST00000266542	hsa-miR-150-5p	7095369	7095375	7mer-m8	7095368	7095389	140.00	-12.51
CAediting_865951	chr12_7095373_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4761-5p	7095373	7095379	7mer-m8	7095372	7095392	145.00	-12.51
CAediting_865951	chr12_7095373_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6814-5p	7095370	7095377	8mer-1a	7095370	7095393	149.00	-20.15
CAediting_865953	chr12_7095403_-	ENSG00000139178.9	ENST00000266542	hsa-miR-1292-3p	7095403	7095409	7mer-m8	7095402	7095420	152.00	-28.96
CAediting_865918	chr12_7094786_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4423-5p	7094780	7094787	8mer-1a	7094780	7094801	140.00	-11.89
CAediting_865918	chr12_7094786_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4774-3p	7094782	7094788	7mer-m8	7094781	7094801	144.00	-9.94
CAediting_865918	chr12_7094786_-	ENSG00000139178.9	ENST00000266542	hsa-miR-645	7094786	7094792	7mer-m8	7094785	7094802	158.00	-22.28
CAediting_865920	chr12_7094797_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4535	7094792	7094798	7mer-m8	7094791	7094808	143.00	-16.27
CAediting_865920	chr12_7094797_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6861-3p	7094792	7094799	8mer-1a	7094792	7094809	154.00	-23.97
CAediting_865923	chr12_7094825_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6814-3p	7094822	7094829	8mer-1a	7094822	7094843	159.00	-22.55
CAediting_865923	chr12_7094825_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6872-5p	7094822	7094829	8mer-1a	7094822	7094841	155.00	-21.62
CAediting_865926	chr12_7095139_-	ENSG00000139178.9	ENST00000266542	hsa-miR-3191-3p	7095134	7095140	7mer-m8	7095133	7095157	155.00	-20.99
CAediting_865929	chr12_7095183_-	ENSG00000139178.9	ENST00000266542	hsa-miR-7975	7095181	7095186	6mer	7095180	7095198	142.00	-21.10
CAediting_865930	chr12_7095188_-	ENSG00000139178.9	ENST00000266542	hsa-miR-324-3p	7095188	7095194	7mer-m8	7095187	7095209	145.00	-23.67
CAediting_865935	chr12_7095237_-	ENSG00000139178.9	ENST00000266542	hsa-miR-3943	7095233	7095239	7mer-m8	7095232	7095252	150.00	-22.28
CAediting_865937	chr12_7095254_-	ENSG00000139178.9	ENST00000266542	hsa-miR-140-3p	7095252	7095258	7mer-m8	7095251	7095274	154.00	-26.32
CAediting_865939	chr12_7095284_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6844	7095283	7095289	7mer-m8	7095282	7095303	155.00	-7.49
CAediting_865940	chr12_7095298_-	ENSG00000139178.9	ENST00000266542	hsa-miR-374b-3p	7095293	7095300	8mer-1a	7095293	7095315	151.00	-12.20
CAediting_865940	chr12_7095298_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4756-3p	7095298	7095304	7mer-m8	7095297	7095316	151.00	-16.82
CAediting_865941	chr12_7095304_-	ENSG00000139178.9	ENST00000266542	hsa-miR-483-5p	7095301	7095307	7mer-m8	7095300	7095321	140.00	-14.01
CAediting_865952	chr12_7095387_-	ENSG00000139178.9	ENST00000266542	hsa-miR-513a-5p	7095386	7095392	7mer-m8	7095385	7095402	144.00	-16.68
CAediting_865952	chr12_7095387_-	ENSG00000139178.9	ENST00000266542	hsa-miR-513a-5p	7095386	7095392	7mer-m8	7095385	7095402	144.00	-16.68
CAediting_865952	chr12_7095387_-	ENSG00000139178.9	ENST00000266542	hsa-miR-638	7095381	7095387	7mer-1a	7095381	7095405	157.00	-32.92
CAediting_865943	chr12_7095311_-	ENSG00000139178.9	ENST00000266542	hsa-miR-23a-5p	7095306	7095312	7mer-m8	7095305	7095331	146.00	-29.06
CAediting_865943	chr12_7095311_-	ENSG00000139178.9	ENST00000266542	hsa-miR-23b-5p	7095306	7095312	7mer-m8	7095305	7095325	156.00	-19.96

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_865952	chr12_7095387_-	ENSG00000139178.9	ENST00000266542	hsa-miR-10399-5p	7095385	7095391	7mer-m8	7095384	7095405	144	-10.39
CAediting_865924	chr12_7094838_-	ENSG00000139178.9	ENST00000266542	hsa-miR-1200	7094835	7094841	7mer-m8	7094834	7094855	140	-17.64
CAediting_865924	chr12_7094838_-	ENSG00000139178.9	ENST00000266542	hsa-miR-1238-5p	7094838	7094844	7mer-m8	7094837	7094863	144	-18.93
CAediting_865925	chr12_7094842_-	ENSG00000139178.9	ENST00000266542	hsa-miR-1238-5p	7094838	7094844	7mer-m8	7094837	7094863	144	-18.93
CAediting_865937	chr12_7095254_-	ENSG00000139178.9	ENST00000266542	hsa-miR-139-5p	7095253	7095258	6mer	7095252	7095273	151	-33.94
CAediting_865953	chr12_7095403_-	ENSG00000139178.9	ENST00000266542	hsa-miR-191-3p	7095402	7095407	6mer	7095401	7095425	143	-30.01
CAediting_865942	chr12_7095309_-	ENSG00000139178.9	ENST00000266542	hsa-miR-193b-5p	7095304	7095311	8mer-1a	7095304	7095325	142	-15.74
CAediting_865934	chr12_7095227_-	ENSG00000139178.9	ENST00000266542	hsa-miR-1976	7095222	7095229	8mer-1a	7095222	7095242	149	-24.39
CAediting_865941	chr12_7095304_-	ENSG00000139178.9	ENST00000266542	hsa-miR-3170	7095304	7095310	7mer-m8	7095303	7095324	140	-13.8
CAediting_865942	chr12_7095309_-	ENSG00000139178.9	ENST00000266542	hsa-miR-3170	7095304	7095310	7mer-m8	7095303	7095324	140	-13.8
CAediting_865917	chr12_7094767_-	ENSG00000139178.9	ENST00000266542	hsa-miR-3170	7094767	7094773	7mer-m8	7094766	7094787	140	-12.37
CAediting_865953	chr12_7095403_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4252	7095398	7095404	7mer-m8	7095397	7095415	150	-23.62
CAediting_865946	chr12_7095320_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4435	7095319	7095326	8mer-1a	7095319	7095340	140	-15.03
CAediting_865946	chr12_7095320_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4435	7095319	7095326	8mer-1a	7095319	7095340	140	-15.03
CAediting_865944	chr12_7095317_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4716-5p	7095314	7095320	7mer-m8	7095313	7095334	140	-12.32
CAediting_865945	chr12_7095319_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4716-5p	7095314	7095320	7mer-m8	7095313	7095334	140	-12.32
CAediting_865938	chr12_7095280_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4735-5p	7095279	7095285	7mer-m8	7095278	7095299	140	-5.48
CAediting_865939	chr12_7095284_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4735-5p	7095279	7095285	7mer-m8	7095278	7095299	140	-5.48
CAediting_865924	chr12_7094838_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4758-5p	7094838	7094844	7mer-m8	7094837	7094859	149	-19.91
CAediting_865925	chr12_7094842_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4758-5p	7094838	7094844	7mer-m8	7094837	7094859	149	-19.91
CAediting_865944	chr12_7095317_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4781-3p	7095316	7095322	7mer-m8	7095315	7095336	140	-13.41
CAediting_865945	chr12_7095319_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4781-3p	7095316	7095322	7mer-m8	7095315	7095336	140	-13.41
CAediting_865946	chr12_7095320_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4781-3p	7095316	7095322	7mer-m8	7095315	7095336	140	-13.41
CAediting_865920	chr12_7094797_-	ENSG00000139178.9	ENST00000266542	hsa-miR-5009-5p	7094792	7094798	7mer-m8	7094791	7094811	150	-23.1
CAediting_865946	chr12_7095320_-	ENSG00000139178.9	ENST00000266542	hsa-miR-588	7095319	7095325	7mer-1a	7095319	7095339	143	-23.97
CAediting_865949	chr12_7095351_-	ENSG00000139178.9	ENST00000266542	hsa-miR-640	7095351	7095357	7mer-m8	7095350	7095370	151	-20.04
CAediting_865952	chr12_7095387_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6504-3p	7095385	7095391	7mer-m8	7095384	7095405	152	-15.11
CAediting_865917	chr12_7094767_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6717-5p	7094761	7094768	8mer-1a	7094761	7094782	147	-20.22
CAediting_865934	chr12_7095227_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6747-3p	7095224	7095231	8mer-1a	7095224	7095246	149	-23.68
CAediting_865935	chr12_7095237_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6778-3p	7095234	7095240	7mer-m8	7095233	7095252	141	-15.45
CAediting_865948	chr12_7095348_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6790-3p	7095343	7095350	8mer-1a	7095343	7095363	155	-25.17
CAediting_865940	chr12_7095298_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6832-5p	7095297	7095303	7mer-m8	7095296	7095318	142	-15.43
CAediting_865925	chr12_7094842_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6842-3p	7094842	7094848	7mer-m8	7094841	7094862	140	-15.15
CAediting_865941	chr12_7095304_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6855-5p	7095304	7095310	7mer-m8	7095303	7095327	145	-17.8
CAediting_865942	chr12_7095309_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6855-5p	7095304	7095310	7mer-m8	7095303	7095327	145	-17.8
CAediting_865917	chr12_7094767_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6855-5p	7094767	7094773	7mer-m8	7094766	7094790	145	-16.27
CAediting_865941	chr12_7095304_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6890-5p	7095303	7095309	7mer-m8	7095302	7095322	142	-13.42
CAediting_865917	chr12_7094767_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6890-5p	7094766	7094772	7mer-m8	7094765	7094785	142	-12.02
CAediting_865937	chr12_7095254_-	ENSG00000139178.9	ENST00000266542	hsa-miR-7151-3p	7095254	7095260	7mer-m8	7095253	7095273	140	-18.55
CAediting_865952	chr12_7095387_-	ENSG00000139178.9	ENST00000266542	hsa-miR-7151-3p	7095386	7095393	8mer-1a	7095386	7095410	145	-20.4
CAediting_865937	chr12_7095254_-	ENSG00000139178.9	ENST00000266542	hsa-miR-8052	7095248	7095254	7mer-1a	7095248	7095268	141	-23.68
CAediting_865933	chr12_7095221_-	ENSG00000139178.9	ENST00000266542	hsa-miR-8062	7095216	7095222	7mer-m8	7095215	7095235	141	-10.43
CAediting_865954	chr12_7096567_-	ENSG00000139178.9	ENST00000544702	hsa-miR-550b-2-5p	7096567	7096573	7mer-m8	7096566	7096587	142	-13.46
CAediting_865954	chr12_7096567_-	ENSG00000139178.9	ENST00000544702	hsa-miR-550b-2-5p	7096567	7096573	7mer-m8	7096566	7096587	142	-13.46
CAediting_865954	chr12_7096567_-	ENSG00000139178.9	ENST00000544702	hsa-miR-6889-3p	7096566	7096572	7mer-m8	7096565	7096584	150	-13.85
CAediting_865954	chr12_7096567_-	ENSG00000139178.9	ENST00000544702	hsa-miR-892a	7096565	7096570	6mer	7096564	7096581	142	-24.31

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000139178.9	ENST00000544702	hsa-miR-624-3p	7096899	7096905	7mer-m8	7096898	7096918	140	-16.02
CAediting_524911	chr7_5495852_-	ENSG00000139178.9	ENST00000539803	hsa-miR-589-3p	7093689	7093694	6mer	7093688	7093711	150	-28.35
CAediting_442554	chr5_154685830_+	ENSG00000139178.9	ENST00000539803	hsa-miR-1303	7090115	7090121	7mer-m8	7090114	7090133	145	-14.56
CAediting_1054808	chr15_66496985_-	ENSG00000139178.9	ENST00000266542	hsa-miR-4512	7096129	7096135	7mer-m8	7096128	7096148	154	-23.24
CAediting_580943	chr7_100356700_+	ENSG00000139178.9	ENST00000266542	hsa-miR-6840-3p	7096125	7096131	7mer-1a	7096125	7096146	140	-29.42
CAediting_604450	chr7_133034877_-	ENSG00000139178.9	ENST00000266542	hsa-miR-3654	7094790	7094796	7mer-m8	7094789	7094807	140	-19.21
CAediting_86358	chr1_109598906_+	ENSG00000139178.9	ENST00000544702	hsa-miR-197-5p	7096902	7096907	6mer	7096892	7096914	141	-24.06
CAediting_117844	chr1_162342605_+	ENSG00000139178.9	ENST00000537833	hsa-miR-556-3p	7098357	7098363	7mer-m8	7098356	7098378	142	-7.73
CAediting_117844	chr1_162342605_+	ENSG00000139178.9	ENST00000534969	hsa-miR-556-3p	7098357	7098363	7mer-m8	7098356	7098378	142	-7.73
CAediting_468389	chr6_31355314_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6891-5p	7096167	7096172	6mer	7096163	7096181	146	-21.35
CAediting_468389	chr6_31355314_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6891-5p	7096163	7096170	8mer-1a	7096163	7096181	146	-21.35
CAediting_468389	chr6_31355314_-	ENSG00000139178.9	ENST00000266542	hsa-miR-6891-5p	7095670	7095676	7mer-m8	7095669	7095688	151	-27.71

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_442554	chr5_154685830_+	ENSG00000139178.9	ENST00000266542	hsa-miR-1303	7094971	7094978	8mer-1a	7094971	7094992	142	-12.72

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for C1RL

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for C1RL

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
GBM	CAediting_865945	chr12_7095319_-	.	.	.	.	0.0421731653662132	0.280154386427283
BRCA	CAediting_865961	chr12_7097340_-	0.00200513096806811	0.184531776920963	.	.	.	.
KIRC	CAediting_865961	chr12_7097340_-	0.00289854605841035	0.210088050391546	.	.	.	.
STAD	CAediting_865964	chr12_7097359_-	0.00770749822964319	0.188382533438123	.	.	.	.
KIRP	CAediting_865964	chr12_7097359_-	0.035536322856038	0.201605520223765	.	.	.	.
BRCA	CAediting_865967	chr12_7097375_-	0.0133705092022427	0.127477225119511	.	.	.	.
LIHC	CAediting_865967	chr12_7097375_-	0.0184552194005419	0.187286850739468	.	.	.	.
CESC	CAediting_865967	chr12_7097375_-	0.00725184699270728	0.332574277946264	.	.	.	.
LUAD	CAediting_865967	chr12_7097375_-	3.93903860381798e-05	0.238131252677908	.	.	.	.
UCEC	CAediting_865967	chr12_7097375_-	0.00701683318765365	0.211063939231841	.	.	.	.
KIRP	CAediting_865967	chr12_7097375_-	0.00284384649721049	0.219997807818777	.	.	.	.
ESCA	CAediting_865967	chr12_7097375_-	.	.	0.0198568461082209	0.198094120590204	.	.
BLCA	CAediting_865974	chr12_7097418_-	0.0326384004457894	0.252119001008319	.	.	.	.
LIHC	CAediting_865974	chr12_7097418_-	.	.	.	.	0.0427808414183904	0.218997455482415
LUSC	CAediting_865974	chr12_7097418_-	0.0304666479703986	0.250088908286072	.	.	.	.
UCEC	CAediting_865974	chr12_7097418_-	0.038976454295858	0.227075695927999	.	.	.	.
STAD	CAediting_865976	chr12_7097444_-	.	.	0.00787768037921557	0.283129558234659	.	.
BRCA	CAediting_865989	chr12_7097476_-	0.0239951713273978	0.267722830467468	.	.	.	.
STAD	CAediting_865999	chr12_7097521_-	0.0269034870015419	0.245912657843927	.	.	0.0126987864018217	0.275794470169492
BRCA	CAediting_866005	chr12_7097554_-	0.0223502542810863	0.265290712864411	.	.	.	.
KIRC	CAediting_866005	chr12_7097554_-	0.0109947495325497	0.343478840326585	0.0482588951896428	0.270076374996874	.	.
BRCA	CAediting_866006	chr12_7097555_-	1.08670374959142e-06	0.427927167756849	.	.	.	.
LIHC	CAediting_866006	chr12_7097555_-	0.0395953808262321	0.257956009277264	.	.	.	.
LUSC	CAediting_866006	chr12_7097555_-	0.00602284384000053	0.334661485173017	.	.	.	.
STAD	CAediting_866006	chr12_7097555_-	0.0242224800084189	0.221983018706947	.	.	.	.
KIRC	CAediting_866006	chr12_7097555_-	0.0337921473391372	0.229177587826396	0.0212669798179348	0.248095469960476	.	.
KIRP	CAediting_866006	chr12_7097555_-	6.24640668762485e-05	0.472245523939425	.	.	.	.
ESCA	CAediting_866006	chr12_7097555_-	0.0302271964421918	0.253850780670556	.	.	.	.
STAD	CAediting_866007	chr12_7097563_-	0.000230238127779791	0.451496706468802	.	.	.	.
BLCA	CAediting_866008	chr12_7097577_-	5.16124377209515e-06	0.446353556271653	.	.	.	.
BRCA	CAediting_866008	chr12_7097577_-	2.31863935687967e-16	0.428670491268972	.	.	.	.
LIHC	CAediting_866008	chr12_7097577_-	5.75835721783457e-06	0.364225780674303	.	.	.	.
LUAD	CAediting_866008	chr12_7097577_-	1.36709856285413e-06	0.295938284944114	.	.	.	.
LUSC	CAediting_866008	chr12_7097577_-	1.56116597645597e-06	0.342842378778892	.	.	.	.
PRAD	CAediting_866008	chr12_7097577_-	0.0313508050009992	0.261330380728493	.	.	.	.
HNSC	CAediting_866008	chr12_7097577_-	0.0302979451747121	0.2799233625354	.	.	.	.
STAD	CAediting_866008	chr12_7097577_-	0.00432574157353538	0.234062367346717	.	.	.	.
THCA	CAediting_866008	chr12_7097577_-	0.000830334745056219	0.453543543005666	.	.	.	.
KIRC	CAediting_866008	chr12_7097577_-	1.35822285744659e-05	0.289323957970826	.	.	.	.
UCEC	CAediting_866008	chr12_7097577_-	0.00480575673198675	0.285515713538167	.	.	.	.
KIRP	CAediting_866008	chr12_7097577_-	2.9862018030149e-07	0.374759778638222	.	.	.	.
OV	CAediting_866008	chr12_7097577_-	0.00835849824757778	0.185097685031202	.	.	.	.
PAAD	CAediting_866008	chr12_7097577_-	0.0349698674647382	0.2264072391936	.	.	.	.
BRCA	CAediting_866015	chr12_7098011_-	3.15802504460937e-06	0.365440538640809	.	.	.	.
LIHC	CAediting_866015	chr12_7098011_-	0.031178834049814	0.242663741660961	.	.	.	.
LUAD	CAediting_866015	chr12_7098011_-	5.62802408870041e-05	0.462187373330188	.	.	.	.
KIRC	CAediting_866015	chr12_7098011_-	0.00106924339765814	0.307843984865407	.	.	.	.
UCEC	CAediting_866015	chr12_7098011_-	6.33250274628778e-05	0.43698147391848	.	.	.	.
KIRP	CAediting_866015	chr12_7098011_-	4.35396973390423e-05	0.448218221813662	.	.	.	.
BRCA	CAediting_866037	chr12_7098208_-	.	.	8.7606982098588e-06	0.428332278484285	.	.
KIRC	CAediting_866037	chr12_7098208_-	.	.	0.000664328317432403	0.328438973745381	.	.
KIRP	CAediting_866037	chr12_7098208_-	.	.	1.31279147723472e-07	0.55534238966838	.	.

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Relation with cancer stages for C1RL

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_865974	chr12_7097418_-	0.0442846621323768	-0.332604357511294
ESCA	pathologic_stage	CAediting_865999	chr12_7097521_-	0.0207766323789999	-0.340019643034566
HNSC	clinical_stage	CAediting_865961	chr12_7097340_-	0.00188421530322594	-0.378387312310453
KIRC	pathologic_stage	CAediting_865976	chr12_7097444_-	0.00562816658901821	-0.337202155947858
KIRC	pathologic_stage	CAediting_866037	chr12_7098208_-	0.0112748527913566	-0.24878590141202
KIRP	clinical_stage	CAediting_866006	chr12_7097555_-	0.00739181235354944	0.427722232372029
KIRP	pathologic_stage	CAediting_866006	chr12_7097555_-	0.0162663317841608	0.309075760693821
LIHC	pathologic_stage	CAediting_866008	chr12_7097577_-	0.0308901971740641	-0.186572086705435
LUSC	pathologic_stage	CAediting_865967	chr12_7097375_-	0.00606568460336104	0.175937277709428
OV	clinical_stage	CAediting_865961	chr12_7097340_-	0.00130593690295817	0.229200911438761
STAD	pathologic_stage	CAediting_865975	chr12_7097434_-	0.0428800065972855	0.164476669369258

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Relation with survival for C1RL

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BRCA	CAediting_865976	chr12_7097444_-	0.0136169171622447	0.0334837	858903
LIHC	CAediting_865961	chr12_7097340_-	0.00155231267282563	0.000378981	0.000155815
COAD	CAediting_865967	chr12_7097375_-	0.0162298368555278	0.00449362	0.00800734
GBM	CAediting_865945	chr12_7095319_-	0.00100313252288819	0.0430552	9.24823e-05
GBM	CAediting_865951	chr12_7095373_-	0.0244700190693534	0.000439463	7625.23
UCEC	CAediting_865945	chr12_7095319_-	0.0426753362700354	0.0367119	184234
KIRP	CAediting_865976	chr12_7097444_-	0.0295687184386207	0.0395599	122.355

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RelatedDrugs for C1RL

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for C1RL

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene