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Editing gene: MAPKAPK5-AS1 (CAeditome ID:51275)

Gene summary for MAPKAPK5-AS1

Gene summary

Gene information	Gene symbol	MAPKAPK5-AS1
	Gene ID	51275
	Gene name	MAPKAPK5 antisense RNA 1
	Synonyms	C12orf47
	Cytomap	12q24.12
	Type of gene	ncRNA
	Description	MAPKAPK5 antisense RNA 1 (non-protein coding)apoptosis-related protein PNAS-1
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for MAPKAPK5-AS1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000234608.6

RNA A-to-I editing events in Cancer.

CAediting_927806(111840379, -), CAediting_927807(111840388, -), CAediting_927808(111840401, -), CAediting_927809(111840402, -), CAediting_927810(111840419, -), CAediting_927811(111840423, -), CAediting_927812(111840427, -), CAediting_927813(111840428, -), CAediting_927814(111840433, -), CAediting_927815(111840440, -), CAediting_927816(111840460, -), CAediting_927817(111840945, -), CAediting_927818(111841011, -), CAediting_927819(111841046, -), CAediting_927820(111841047, -), CAediting_927821(111841055, -),

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RNA editing positional annotations for MAPKAPK5-AS1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_927806	chr12_111840379_-	ncRNA_exonic
CAediting_927807	chr12_111840388_-	ncRNA_exonic
CAediting_927808	chr12_111840401_-	ncRNA_exonic
CAediting_927809	chr12_111840402_-	ncRNA_exonic
CAediting_927810	chr12_111840419_-	ncRNA_exonic
CAediting_927811	chr12_111840423_-	ncRNA_exonic
CAediting_927812	chr12_111840427_-	ncRNA_exonic
CAediting_927813	chr12_111840428_-	ncRNA_exonic
CAediting_927814	chr12_111840433_-	ncRNA_exonic
CAediting_927815	chr12_111840440_-	ncRNA_exonic
CAediting_927816	chr12_111840460_-	ncRNA_exonic
CAediting_927817	chr12_111840945_-	ncRNA_intronic
CAediting_927818	chr12_111841011_-	ncRNA_intronic
CAediting_927819	chr12_111841046_-	ncRNA_intronic
CAediting_927820	chr12_111841047_-	ncRNA_intronic
CAediting_927821	chr12_111841055_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_927806	chr12_111840379_-	SINE	Alu	AluJb
CAediting_927807	chr12_111840388_-	SINE	Alu	AluJb
CAediting_927808	chr12_111840401_-	SINE	Alu	AluJb
CAediting_927809	chr12_111840402_-	SINE	Alu	AluJb
CAediting_927810	chr12_111840419_-	SINE	Alu	AluJb
CAediting_927811	chr12_111840423_-	SINE	Alu	AluJb
CAediting_927812	chr12_111840427_-	SINE	Alu	AluJb
CAediting_927813	chr12_111840428_-	SINE	Alu	AluJb
CAediting_927814	chr12_111840433_-	SINE	Alu	AluJb
CAediting_927815	chr12_111840440_-	SINE	Alu	AluJb
CAediting_927816	chr12_111840460_-	SINE	Alu	AluJb
CAediting_927817	chr12_111840945_-	SINE	Alu	AluSz
CAediting_927818	chr12_111841011_-	SINE	Alu	AluSz
CAediting_927819	chr12_111841046_-	SINE	Alu	AluSz
CAediting_927820	chr12_111841047_-	SINE	Alu	AluSz
CAediting_927821	chr12_111841055_-	SINE	Alu	AluSz

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RNA A-to-I editing events in the alternative splicing sites for MAPKAPK5-AS1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000234608.6.MAPKAPK5-AS1.

Correlation between RNA A-to-I editing and PSI for ENSG00000234608.6.MAPKAPK5-AS1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for MAPKAPK5-AS1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for MAPKAPK5-AS1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for MAPKAPK5-AS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-1915-3p	111840432	111840438	7mer-m8	111840431	111840450	140	-20.41
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4685-5p	111840433	111840438	6mer	111840432	111840457	152	-37.49
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-6764-5p	111840432	111840438	7mer-m8	111840431	111840450	157	-25.74
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-1915-3p	111840432	111840438	7mer-m8	111840431	111840450	140	-20.41
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-4685-5p	111840433	111840438	6mer	111840432	111840457	152	-37.49
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-6764-5p	111840432	111840438	7mer-m8	111840431	111840450	157	-25.74
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-1915-3p	111840432	111840438	7mer-m8	111840431	111840450	140	-20.41
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4685-5p	111840433	111840438	6mer	111840432	111840457	152	-37.49
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-6764-5p	111840432	111840438	7mer-m8	111840431	111840450	157	-25.74
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-1915-3p	111840432	111840438	7mer-m8	111840431	111840450	140	-20.41
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-4685-5p	111840433	111840438	6mer	111840432	111840457	152	-37.49
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-6764-5p	111840432	111840438	7mer-m8	111840431	111840450	157	-25.74
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-1915-3p	111840432	111840438	7mer-m8	111840431	111840450	140	-20.41
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-4685-5p	111840433	111840438	6mer	111840432	111840457	152	-37.49
CAediting_927814	chr12_111840433_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-6764-5p	111840432	111840438	7mer-m8	111840431	111840450	157	-25.74
CAediting_927806	chr12_111840379_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-662	111840378	111840383	6mer	111840377	111840399	148	-28.98
CAediting_927806	chr12_111840379_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-663b	111840374	111840380	7mer-m8	111840373	111840396	149	-31.22
CAediting_927806	chr12_111840379_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-662	111840378	111840383	6mer	111840377	111840399	148	-28.98
CAediting_927806	chr12_111840379_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-663b	111840374	111840380	7mer-m8	111840373	111840396	149	-31.22
CAediting_927806	chr12_111840379_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-662	111840378	111840383	6mer	111840377	111840399	148	-28.98
CAediting_927806	chr12_111840379_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-663b	111840374	111840380	7mer-m8	111840373	111840396	149	-31.22
CAediting_927806	chr12_111840379_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-662	111840378	111840383	6mer	111840377	111840399	148	-28.98
CAediting_927806	chr12_111840379_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-663b	111840374	111840380	7mer-m8	111840373	111840396	149	-31.22
CAediting_927806	chr12_111840379_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-662	111840378	111840383	6mer	111840377	111840399	148	-28.98
CAediting_927806	chr12_111840379_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-663b	111840374	111840380	7mer-m8	111840373	111840396	149	-31.22
CAediting_927809	chr12_111840402_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-6771-5p	111840400	111840407	8mer-1a	111840400	111840421	164	-30.2
CAediting_927809	chr12_111840402_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-6771-5p	111840400	111840407	8mer-1a	111840400	111840421	164	-30.2
CAediting_927809	chr12_111840402_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-6771-5p	111840400	111840407	8mer-1a	111840400	111840421	164	-30.2
CAediting_927809	chr12_111840402_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-6771-5p	111840400	111840407	8mer-1a	111840400	111840421	164	-30.2
CAediting_927809	chr12_111840402_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-6771-5p	111840400	111840407	8mer-1a	111840400	111840421	164	-30.2
CAediting_927811	chr12_111840423_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-1255b-2-3p	111840422	111840428	7mer-m8	111840421	111840442	140	-14.12
CAediting_927811	chr12_111840423_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-1255b-2-3p	111840422	111840428	7mer-m8	111840421	111840442	140	-14.12
CAediting_927811	chr12_111840423_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-1255b-2-3p	111840422	111840428	7mer-m8	111840421	111840442	140	-14.12
CAediting_927811	chr12_111840423_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-1255b-2-3p	111840422	111840428	7mer-m8	111840421	111840442	140	-14.12
CAediting_927811	chr12_111840423_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-1255b-2-3p	111840422	111840428	7mer-m8	111840421	111840442	140	-14.12
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-12113	111840427	111840433	7mer-m8	111840426	111840448	149	-20.51
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-3622a-3p	111840423	111840430	8mer-1a	111840423	111840444	152	-17.6
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-3622b-3p	111840423	111840430	8mer-1a	111840423	111840443	157	-22.67
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4539	111840427	111840433	7mer-m8	111840426	111840445	149	-16.59
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-12113	111840427	111840433	7mer-m8	111840426	111840448	149	-20.51
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-3622a-3p	111840423	111840430	8mer-1a	111840423	111840444	152	-17.6
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-3622b-3p	111840423	111840430	8mer-1a	111840423	111840443	157	-22.67
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-4539	111840427	111840433	7mer-m8	111840426	111840445	149	-16.59
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-12113	111840427	111840433	7mer-m8	111840426	111840448	149	-20.51
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-3622a-3p	111840423	111840430	8mer-1a	111840423	111840444	152	-17.6
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-3622b-3p	111840423	111840430	8mer-1a	111840423	111840443	157	-22.67
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4539	111840427	111840433	7mer-m8	111840426	111840445	149	-16.59
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-12113	111840427	111840433	7mer-m8	111840426	111840448	149	-20.51
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-3622a-3p	111840423	111840430	8mer-1a	111840423	111840444	152	-17.6
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-3622b-3p	111840423	111840430	8mer-1a	111840423	111840443	157	-22.67
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-4539	111840427	111840433	7mer-m8	111840426	111840445	149	-16.59
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-12113	111840427	111840433	7mer-m8	111840426	111840448	149	-20.51
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-3622a-3p	111840423	111840430	8mer-1a	111840423	111840444	152	-17.6
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-3622b-3p	111840423	111840430	8mer-1a	111840423	111840443	157	-22.67
CAediting_927812	chr12_111840427_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-4539	111840427	111840433	7mer-m8	111840426	111840445	149	-16.59
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-185-3p	111840436	111840442	7mer-m8	111840435	111840456	148	-25.81
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-3135b	111840439	111840445	7mer-m8	111840438	111840458	150	-25.37
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-3652	111840438	111840444	7mer-m8	111840437	111840454	146	-18.5
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4430	111840438	111840444	7mer-m8	111840437	111840455	155	-23.57
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4492	111840437	111840443	7mer-m8	111840436	111840451	145	-23.26
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4498	111840437	111840443	7mer-m8	111840436	111840456	157	-27.34
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4688	111840435	111840440	6mer	111840434	111840455	140	-29.04
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-5001-5p	111840437	111840443	7mer-m8	111840436	111840460	159	-30.72
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-5787	111840438	111840443	6mer	111840437	111840456	142	-30.03
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-6085	111840435	111840441	7mer-m8	111840434	111840451	167	-28.46
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-6813-5p	111840435	111840441	7mer-m8	111840434	111840456	156	-32.45
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-762	111840437	111840443	7mer-m8	111840436	111840456	157	-35.92
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-185-3p	111840436	111840442	7mer-m8	111840435	111840456	148	-25.81
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-3135b	111840439	111840445	7mer-m8	111840438	111840458	150	-25.37
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-3652	111840438	111840444	7mer-m8	111840437	111840454	146	-18.5
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-4430	111840438	111840444	7mer-m8	111840437	111840455	155	-23.57
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-4492	111840437	111840443	7mer-m8	111840436	111840451	145	-23.26
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-4498	111840437	111840443	7mer-m8	111840436	111840456	157	-27.34
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-4688	111840435	111840440	6mer	111840434	111840455	140	-29.04
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-5001-5p	111840437	111840443	7mer-m8	111840436	111840460	159	-30.72
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-5787	111840438	111840443	6mer	111840437	111840456	142	-30.03
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-6085	111840435	111840441	7mer-m8	111840434	111840451	167	-28.46
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-6813-5p	111840435	111840441	7mer-m8	111840434	111840456	156	-32.45
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-762	111840437	111840443	7mer-m8	111840436	111840456	157	-35.92
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-185-3p	111840436	111840442	7mer-m8	111840435	111840456	148	-25.81
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-3135b	111840439	111840445	7mer-m8	111840438	111840458	150	-25.37
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-3652	111840438	111840444	7mer-m8	111840437	111840454	146	-18.5
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4430	111840438	111840444	7mer-m8	111840437	111840455	155	-23.57
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4492	111840437	111840443	7mer-m8	111840436	111840451	145	-23.26
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4498	111840437	111840443	7mer-m8	111840436	111840456	157	-27.34
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4688	111840435	111840440	6mer	111840434	111840455	140	-29.04
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-5001-5p	111840437	111840443	7mer-m8	111840436	111840460	159	-30.72
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-5787	111840438	111840443	6mer	111840437	111840456	142	-30.03
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-6085	111840435	111840441	7mer-m8	111840434	111840451	167	-28.46
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-6813-5p	111840435	111840441	7mer-m8	111840434	111840456	156	-32.45
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-762	111840437	111840443	7mer-m8	111840436	111840456	157	-35.92
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-185-3p	111840436	111840442	7mer-m8	111840435	111840456	148	-25.81
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-3135b	111840439	111840445	7mer-m8	111840438	111840458	150	-25.37
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-3652	111840438	111840444	7mer-m8	111840437	111840454	146	-18.5
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-4430	111840438	111840444	7mer-m8	111840437	111840455	155	-23.57
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-4492	111840437	111840443	7mer-m8	111840436	111840451	145	-23.26
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-4498	111840437	111840443	7mer-m8	111840436	111840456	157	-27.34
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-4688	111840435	111840440	6mer	111840434	111840455	140	-29.04
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-5001-5p	111840437	111840443	7mer-m8	111840436	111840460	159	-30.72
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-5787	111840438	111840443	6mer	111840437	111840456	142	-30.03
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-6085	111840435	111840441	7mer-m8	111840434	111840451	167	-28.46
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-6813-5p	111840435	111840441	7mer-m8	111840434	111840456	156	-32.45
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-762	111840437	111840443	7mer-m8	111840436	111840456	157	-35.92
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-185-3p	111840436	111840442	7mer-m8	111840435	111840456	148	-25.81
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-3135b	111840439	111840445	7mer-m8	111840438	111840458	150	-25.37
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-3652	111840438	111840444	7mer-m8	111840437	111840454	146	-18.5
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-4430	111840438	111840444	7mer-m8	111840437	111840455	155	-23.57
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-4492	111840437	111840443	7mer-m8	111840436	111840451	145	-23.26
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-4498	111840437	111840443	7mer-m8	111840436	111840456	157	-27.34
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-4688	111840435	111840440	6mer	111840434	111840455	140	-29.04
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-5001-5p	111840437	111840443	7mer-m8	111840436	111840460	159	-30.72
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-5787	111840438	111840443	6mer	111840437	111840456	142	-30.03
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-6085	111840435	111840441	7mer-m8	111840434	111840451	167	-28.46
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-6813-5p	111840435	111840441	7mer-m8	111840434	111840456	156	-32.45
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-762	111840437	111840443	7mer-m8	111840436	111840456	157	-35.92
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-3192-5p	111840400	111840407	8mer-1a	111840400	111840423	156	-25.31
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-326	111840399	111840405	7mer-m8	111840398	111840417	140	-14.14
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-330-5p	111840399	111840405	7mer-m8	111840398	111840419	140	-20.35
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4314	111840400	111840406	7mer-m8	111840399	111840419	142	-20.87
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-514a-5p	111840397	111840404	8mer-1a	111840397	111840417	154	-19.41
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-3192-5p	111840400	111840407	8mer-1a	111840400	111840423	156	-25.31
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-326	111840399	111840405	7mer-m8	111840398	111840417	140	-14.14
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-330-5p	111840399	111840405	7mer-m8	111840398	111840419	140	-20.35
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-4314	111840400	111840406	7mer-m8	111840399	111840419	142	-20.87
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-514a-5p	111840397	111840404	8mer-1a	111840397	111840417	154	-19.41
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-3192-5p	111840400	111840407	8mer-1a	111840400	111840423	156	-25.31
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-326	111840399	111840405	7mer-m8	111840398	111840417	140	-14.14
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-330-5p	111840399	111840405	7mer-m8	111840398	111840419	140	-20.35
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4314	111840400	111840406	7mer-m8	111840399	111840419	142	-20.87
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-514a-5p	111840397	111840404	8mer-1a	111840397	111840417	154	-19.41
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-3192-5p	111840400	111840407	8mer-1a	111840400	111840423	156	-25.31
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-326	111840399	111840405	7mer-m8	111840398	111840417	140	-14.14
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-330-5p	111840399	111840405	7mer-m8	111840398	111840419	140	-20.35
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-4314	111840400	111840406	7mer-m8	111840399	111840419	142	-20.87
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-514a-5p	111840397	111840404	8mer-1a	111840397	111840417	154	-19.41
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-3192-5p	111840400	111840407	8mer-1a	111840400	111840423	156	-25.31
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-326	111840399	111840405	7mer-m8	111840398	111840417	140	-14.14
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-330-5p	111840399	111840405	7mer-m8	111840398	111840419	140	-20.35
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-4314	111840400	111840406	7mer-m8	111840399	111840419	142	-20.87
CAediting_927808	chr12_111840401_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-514a-5p	111840397	111840404	8mer-1a	111840397	111840417	154	-19.41

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-12131	111840440	111840446	7mer-m8	111840439	111840458	145	-13.46
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-3689d	111840414	111840420	7mer-m8	111840413	111840433	149	-21.26
CAediting_927809	chr12_111840402_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-6779-5p	111840401	111840408	8mer-1a	111840401	111840421	143	-22.43
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-6851-5p	111840414	111840420	7mer-m8	111840413	111840437	152	-26.15
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-7854-3p	111840415	111840421	7mer-m8	111840414	111840433	141	-15.36
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-12131	111840440	111840446	7mer-m8	111840439	111840458	145	-13.46
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-3689d	111840414	111840420	7mer-m8	111840413	111840433	149	-21.26
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-6851-5p	111840414	111840420	7mer-m8	111840413	111840437	152	-26.15
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-12131	111840440	111840446	7mer-m8	111840439	111840458	145	-13.46
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-3689d	111840414	111840420	7mer-m8	111840413	111840433	149	-21.26
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000609983.1	hsa-miR-6851-5p	111840414	111840420	7mer-m8	111840413	111840437	152	-26.15
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-12131	111840440	111840446	7mer-m8	111840439	111840458	145	-13.46
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-3689d	111840414	111840420	7mer-m8	111840413	111840433	149	-21.26
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000590479.4	hsa-miR-6851-5p	111840414	111840420	7mer-m8	111840413	111840437	152	-26.15
CAediting_927815	chr12_111840440_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-12131	111840440	111840446	7mer-m8	111840439	111840458	145	-13.46
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-3689d	111840414	111840420	7mer-m8	111840413	111840433	149	-21.26
CAediting_927809	chr12_111840402_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-6779-5p	111840401	111840408	8mer-1a	111840401	111840421	143	-22.43
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-6851-5p	111840414	111840420	7mer-m8	111840413	111840437	152	-26.15
CAediting_927810	chr12_111840419_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-7854-3p	111840415	111840421	7mer-m8	111840414	111840433	141	-15.36

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4477b	111840044	111840051	8mer-1a	111840044	111840065	145	-12.94
CAediting_688081	chr9_63819627_+	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4477b	111841662	111841668	7mer-m8	111841661	111841682	140	-13.06
CAediting_688081	chr9_63819627_+	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4477b	111842036	111842042	7mer-m8	111842035	111842056	140	-13.3
CAediting_688080	chr9_63819626_+	ENSG00000234608.6	ENST00000443596.1	hsa-miR-4477b	111840044	111840051	8mer-1a	111840044	111840065	145	-12.94
CAediting_688081	chr9_63819627_+	ENSG00000234608.6	ENST00000609228.1	hsa-miR-4477b	111841662	111841668	7mer-m8	111841661	111841682	140	-13.06
CAediting_688081	chr9_63819627_+	ENSG00000234608.6	ENST00000609983.1	hsa-miR-4477b	111841662	111841668	7mer-m8	111841661	111841682	140	-13.06
CAediting_688081	chr9_63819627_+	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4477b	111841662	111841668	7mer-m8	111841661	111841682	140	-13.06
CAediting_688081	chr9_63819627_+	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4477b	111842036	111842042	7mer-m8	111842035	111842056	140	-13.3
CAediting_1054808	chr15_66496985_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4512	111842719	111842724	6mer	111842718	111842741	151	-28.07
CAediting_1054808	chr15_66496985_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4512	111842638	111842643	6mer	111842637	111842658	140	-23.37
CAediting_1054808	chr15_66496985_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4512	111842010	111842016	7mer-m8	111842009	111842032	158	-25.42
CAediting_1229415	chr17_67471547_+	ENSG00000234608.6	ENST00000428207.3	hsa-miR-548aa	111842758	111842764	7mer-m8	111842757	111842782	146	-9.08
CAediting_1160181	chr17_7017644_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-195-3p	111840324	111840330	7mer-m8	111840323	111840344	148	-11.12
CAediting_442554	chr5_154685830_+	ENSG00000234608.6	ENST00000428207.3	hsa-miR-1303	111840440	111840446	7mer-m8	111840439	111840465	145	-22.38
CAediting_414656	chr5_72878640_+	ENSG00000234608.6	ENST00000428207.3	hsa-miR-4804-3p	111841593	111841599	7mer-m8	111841592	111841611	148	-19.8
CAediting_1160181	chr17_7017644_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-195-3p	111840324	111840330	7mer-m8	111840323	111840344	148	-11.12
CAediting_442554	chr5_154685830_+	ENSG00000234608.6	ENST00000443596.1	hsa-miR-1303	111840440	111840446	7mer-m8	111840439	111840465	145	-22.38
CAediting_414656	chr5_72878640_+	ENSG00000234608.6	ENST00000609228.1	hsa-miR-4804-3p	111841593	111841599	7mer-m8	111841592	111841611	148	-19.8
CAediting_442554	chr5_154685830_+	ENSG00000234608.6	ENST00000609983.1	hsa-miR-1303	111840440	111840446	7mer-m8	111840439	111840465	145	-22.38
CAediting_414656	chr5_72878640_+	ENSG00000234608.6	ENST00000609983.1	hsa-miR-4804-3p	111841593	111841599	7mer-m8	111841592	111841611	148	-19.8
CAediting_442554	chr5_154685830_+	ENSG00000234608.6	ENST00000590479.4	hsa-miR-1303	111840440	111840446	7mer-m8	111840439	111840465	145	-22.38
CAediting_1054808	chr15_66496985_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4512	111842719	111842724	6mer	111842718	111842741	151	-28.07
CAediting_1054808	chr15_66496985_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4512	111842638	111842643	6mer	111842637	111842658	140	-23.37
CAediting_1054808	chr15_66496985_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4512	111842010	111842016	7mer-m8	111842009	111842032	158	-25.42
CAediting_1229415	chr17_67471547_+	ENSG00000234608.6	ENST00000456429.4	hsa-miR-548aa	111842758	111842764	7mer-m8	111842757	111842782	146	-9.08
CAediting_442554	chr5_154685830_+	ENSG00000234608.6	ENST00000456429.4	hsa-miR-1303	111840440	111840446	7mer-m8	111840439	111840465	145	-22.38
CAediting_414656	chr5_72878640_+	ENSG00000234608.6	ENST00000456429.4	hsa-miR-4804-3p	111841593	111841599	7mer-m8	111841592	111841611	148	-19.8
CAediting_468389	chr6_31355314_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-6891-5p	111842740	111842745	6mer	111842739	111842757	145	-23.26
CAediting_468389	chr6_31355314_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-6891-5p	111842740	111842745	6mer	111842739	111842757	145	-23.26

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-195-3p	111840116	111840122	7mer-m8	111840115	111840136	149	-14.22
CAediting_393	chr1_1167164_+	ENSG00000234608.6	ENST00000428207.3	hsa-miR-200b-3p	111839805	111839811	7mer-m8	111839804	111839826	154	-12.84
CAediting_1368054	chr19_46709310_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-320e	111842141	111842147	7mer-m8	111842140	111842158	151	-19.74
CAediting_748296	chr10_51299626_+	ENSG00000234608.6	ENST00000428207.3	hsa-miR-605-3p	111842104	111842110	7mer-m8	111842103	111842124	147	-10.14
CAediting_580943	chr7_100356700_+	ENSG00000234608.6	ENST00000428207.3	hsa-miR-6840-3p	111842435	111842441	7mer-m8	111842434	111842455	150	-18.68
CAediting_468389	chr6_31355314_-	ENSG00000234608.6	ENST00000428207.3	hsa-miR-6891-5p	111841718	111841724	7mer-m8	111841717	111841735	154	-21.69
CAediting_1160181	chr17_7017644_-	ENSG00000234608.6	ENST00000443596.1	hsa-miR-195-3p	111840116	111840122	7mer-m8	111840115	111840136	149	-14.22
CAediting_393	chr1_1167164_+	ENSG00000234608.6	ENST00000443596.1	hsa-miR-200b-3p	111839805	111839811	7mer-m8	111839804	111839826	154	-12.84
CAediting_393	chr1_1167164_+	ENSG00000234608.6	ENST00000456429.4	hsa-miR-200b-3p	111839805	111839811	7mer-m8	111839804	111839826	154	-12.84
CAediting_1368054	chr19_46709310_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-320e	111842141	111842147	7mer-m8	111842140	111842158	151	-19.74
CAediting_748296	chr10_51299626_+	ENSG00000234608.6	ENST00000456429.4	hsa-miR-605-3p	111842104	111842110	7mer-m8	111842103	111842124	147	-10.14
CAediting_580943	chr7_100356700_+	ENSG00000234608.6	ENST00000456429.4	hsa-miR-6840-3p	111842435	111842441	7mer-m8	111842434	111842455	150	-18.68
CAediting_468389	chr6_31355314_-	ENSG00000234608.6	ENST00000456429.4	hsa-miR-6891-5p	111841718	111841724	7mer-m8	111841717	111841735	154	-21.69

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for MAPKAPK5-AS1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for MAPKAPK5-AS1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_927807	chr12_111840388_-	0.0123869103971944	0.187111996745366	2.6900478913356e-06	0.343428945627664	.	.

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Relation with cancer stages for MAPKAPK5-AS1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for MAPKAPK5-AS1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for MAPKAPK5-AS1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for MAPKAPK5-AS1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene