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Editing gene: MRPL30 (CAeditome ID:51263)

Gene summary for MRPL30

Gene summary

Gene information	Gene symbol	MRPL30
	Gene ID	51263
	Gene name	mitochondrial ribosomal protein L30
	Synonyms	L28MT\|L30MT\|MRP-L28\|MRP-L30\|MRPL28\|MRPL28M\|RPML28
	Cytomap	2q11.2
	Type of gene	protein-coding
	Description	39S ribosomal protein L30, mitochondrial39S ribosomal protein L28, mitochondrialmitochondrial large ribosomal subunit protein uL30m
	Modification date	20210518
	UniProtAcc	Q8TCC3
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
MRPL30	GO:0005739	39S ribosomal protein L30, mitochondrial	28892042
MRPL30	GO:0005762	39S ribosomal protein L30, mitochondrial	25278503
MRPL30	GO:0005762	39S ribosomal protein L30, mitochondrial	28892042

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RNA A-to-I events for MRPL30

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000185414.18

RNA A-to-I editing events in Cancer.

CAediting_201884(99188840, +), CAediting_201885(99190298, +), CAediting_201886(99190863, +), CAediting_201887(99191187, +), CAediting_201888(99192397, +), CAediting_201889(99192410, +), CAediting_201890(99192411, +), CAediting_201891(99195791, +), CAediting_201892(99195792, +), CAediting_201893(99195810, +), CAediting_201894(99195820, +), CAediting_201895(99195826, +), CAediting_201896(99195827, +), CAediting_201897(99195832, +), CAediting_201898(99195835, +), CAediting_201899(99195843, +), CAediting_201900(99195849, +), CAediting_201901(99195862, +), CAediting_201902(99195867, +), CAediting_201903(99195872, +), CAediting_201904(99195875, +), CAediting_201905(99195881, +), CAediting_201906(99195886, +), CAediting_201907(99195892, +), CAediting_201908(99195896, +), CAediting_201909(99195924, +), CAediting_201910(99195927, +), CAediting_201911(99195935, +), CAediting_201912(99195939, +), CAediting_201913(99195943, +), CAediting_201914(99195951, +), CAediting_201915(99195953, +), CAediting_201916(99195961, +), CAediting_201917(99195962, +), CAediting_201918(99195966, +), CAediting_201919(99195977, +), CAediting_201920(99195983, +), CAediting_201921(99195987, +), CAediting_201922(99195990, +), CAediting_201923(99195996, +), CAediting_201924(99196001, +), CAediting_201925(99196002, +), CAediting_201926(99196009, +), CAediting_201927(99196013, +), CAediting_201928(99196015, +), CAediting_201929(99196022, +), CAediting_201930(99196026, +), CAediting_201931(99196031, +), CAediting_201932(99196033, +), CAediting_201933(99196046, +), CAediting_201934(99196076, +), CAediting_201935(99196081, +), CAediting_201936(99196089, +), CAediting_201937(99196320, +), CAediting_201938(99196324, +), CAediting_201939(99196340, +), CAediting_201940(99196344, +), CAediting_201941(99196345, +), CAediting_201942(99196354, +), CAediting_201943(99196356, +), CAediting_201944(99196362, +), CAediting_201945(99196365, +), CAediting_201946(99196370, +), CAediting_201947(99196375, +), CAediting_201948(99196380, +), CAediting_201949(99196387, +), CAediting_201950(99196394, +), CAediting_201951(99196400, +), CAediting_201952(99196401, +), CAediting_201953(99196405, +), CAediting_201954(99196413, +), CAediting_201955(99196425, +), CAediting_201956(99196427, +), CAediting_201957(99196430, +), CAediting_201958(99196434, +), CAediting_201959(99196454, +), CAediting_201960(99196463, +), CAediting_201961(99196467, +), CAediting_201962(99196468, +), CAediting_201963(99196476, +), CAediting_201964(99196477, +), CAediting_201965(99196486, +), CAediting_201966(99196488, +), CAediting_201967(99196490, +), CAediting_201968(99196492, +), CAediting_201969(99196502, +), CAediting_201970(99196514, +), CAediting_201971(99196515, +), CAediting_201972(99196525, +), CAediting_201973(99196526, +), CAediting_201974(99196527, +), CAediting_201975(99196539, +), CAediting_201976(99196540, +), CAediting_201977(99196544, +), CAediting_201978(99196552, +), CAediting_201979(99196557, +), CAediting_201980(99196565, +), CAediting_201981(99196566, +), CAediting_201982(99196567, +), CAediting_201983(99196568, +), CAediting_201984(99196579, +), CAediting_201985(99196581, +), CAediting_201986(99196588, +), CAediting_201987(99196597, +), CAediting_201988(99196601, +),

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RNA editing positional annotations for MRPL30 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_201884	chr2_99188840_+	ncRNA_intronic
CAediting_201885	chr2_99190298_+	ncRNA_intronic
CAediting_201886	chr2_99190863_+	ncRNA_intronic
CAediting_201887	chr2_99191187_+	ncRNA_intronic
CAediting_201888	chr2_99192397_+	ncRNA_intronic
CAediting_201889	chr2_99192410_+	ncRNA_intronic
CAediting_201890	chr2_99192411_+	ncRNA_intronic
CAediting_201891	chr2_99195791_+	ncRNA_exonic
CAediting_201892	chr2_99195792_+	ncRNA_exonic
CAediting_201893	chr2_99195810_+	ncRNA_exonic
CAediting_201894	chr2_99195820_+	ncRNA_exonic
CAediting_201895	chr2_99195826_+	ncRNA_exonic
CAediting_201896	chr2_99195827_+	ncRNA_exonic
CAediting_201897	chr2_99195832_+	ncRNA_exonic
CAediting_201898	chr2_99195835_+	ncRNA_exonic
CAediting_201899	chr2_99195843_+	ncRNA_exonic
CAediting_201900	chr2_99195849_+	ncRNA_exonic
CAediting_201901	chr2_99195862_+	ncRNA_exonic
CAediting_201902	chr2_99195867_+	ncRNA_exonic
CAediting_201903	chr2_99195872_+	ncRNA_exonic
CAediting_201904	chr2_99195875_+	ncRNA_exonic
CAediting_201905	chr2_99195881_+	ncRNA_exonic
CAediting_201906	chr2_99195886_+	ncRNA_exonic
CAediting_201907	chr2_99195892_+	ncRNA_exonic
CAediting_201908	chr2_99195896_+	ncRNA_exonic
CAediting_201909	chr2_99195924_+	ncRNA_exonic
CAediting_201910	chr2_99195927_+	ncRNA_exonic
CAediting_201911	chr2_99195935_+	ncRNA_exonic
CAediting_201912	chr2_99195939_+	ncRNA_exonic
CAediting_201913	chr2_99195943_+	ncRNA_exonic
CAediting_201914	chr2_99195951_+	ncRNA_exonic
CAediting_201915	chr2_99195953_+	ncRNA_exonic
CAediting_201916	chr2_99195961_+	ncRNA_exonic
CAediting_201917	chr2_99195962_+	ncRNA_exonic
CAediting_201918	chr2_99195966_+	ncRNA_exonic
CAediting_201919	chr2_99195977_+	ncRNA_exonic
CAediting_201920	chr2_99195983_+	ncRNA_exonic
CAediting_201921	chr2_99195987_+	ncRNA_exonic
CAediting_201922	chr2_99195990_+	ncRNA_exonic
CAediting_201923	chr2_99195996_+	ncRNA_exonic
CAediting_201924	chr2_99196001_+	ncRNA_exonic
CAediting_201925	chr2_99196002_+	ncRNA_exonic
CAediting_201926	chr2_99196009_+	ncRNA_exonic
CAediting_201927	chr2_99196013_+	ncRNA_exonic
CAediting_201928	chr2_99196015_+	ncRNA_exonic
CAediting_201929	chr2_99196022_+	ncRNA_exonic
CAediting_201930	chr2_99196026_+	ncRNA_intronic
CAediting_201931	chr2_99196031_+	ncRNA_intronic
CAediting_201932	chr2_99196033_+	ncRNA_intronic
CAediting_201933	chr2_99196046_+	ncRNA_intronic
CAediting_201934	chr2_99196076_+	ncRNA_intronic
CAediting_201935	chr2_99196081_+	ncRNA_intronic
CAediting_201936	chr2_99196089_+	ncRNA_intronic
CAediting_201937	chr2_99196320_+	ncRNA_intronic
CAediting_201938	chr2_99196324_+	ncRNA_intronic
CAediting_201939	chr2_99196340_+	ncRNA_intronic
CAediting_201940	chr2_99196344_+	ncRNA_intronic
CAediting_201941	chr2_99196345_+	ncRNA_intronic
CAediting_201942	chr2_99196354_+	ncRNA_intronic
CAediting_201943	chr2_99196356_+	ncRNA_splicing
CAediting_201944	chr2_99196362_+	ncRNA_exonic
CAediting_201945	chr2_99196365_+	ncRNA_exonic
CAediting_201946	chr2_99196370_+	ncRNA_exonic
CAediting_201947	chr2_99196375_+	ncRNA_exonic
CAediting_201948	chr2_99196380_+	ncRNA_exonic
CAediting_201949	chr2_99196387_+	ncRNA_exonic
CAediting_201950	chr2_99196394_+	ncRNA_exonic
CAediting_201951	chr2_99196400_+	ncRNA_exonic
CAediting_201952	chr2_99196401_+	ncRNA_exonic
CAediting_201953	chr2_99196405_+	ncRNA_exonic
CAediting_201954	chr2_99196413_+	ncRNA_exonic
CAediting_201955	chr2_99196425_+	ncRNA_exonic
CAediting_201956	chr2_99196427_+	ncRNA_exonic
CAediting_201957	chr2_99196430_+	ncRNA_exonic
CAediting_201958	chr2_99196434_+	ncRNA_exonic
CAediting_201959	chr2_99196454_+	ncRNA_exonic
CAediting_201960	chr2_99196463_+	ncRNA_exonic
CAediting_201961	chr2_99196467_+	ncRNA_exonic
CAediting_201962	chr2_99196468_+	ncRNA_exonic
CAediting_201963	chr2_99196476_+	ncRNA_exonic
CAediting_201964	chr2_99196477_+	ncRNA_exonic
CAediting_201965	chr2_99196486_+	ncRNA_exonic
CAediting_201966	chr2_99196488_+	ncRNA_exonic
CAediting_201967	chr2_99196490_+	ncRNA_exonic
CAediting_201968	chr2_99196492_+	ncRNA_exonic
CAediting_201969	chr2_99196502_+	ncRNA_exonic
CAediting_201970	chr2_99196514_+	ncRNA_exonic
CAediting_201971	chr2_99196515_+	ncRNA_exonic
CAediting_201972	chr2_99196525_+	ncRNA_exonic
CAediting_201973	chr2_99196526_+	ncRNA_exonic
CAediting_201974	chr2_99196527_+	ncRNA_exonic
CAediting_201975	chr2_99196539_+	ncRNA_exonic
CAediting_201976	chr2_99196540_+	ncRNA_exonic
CAediting_201977	chr2_99196544_+	ncRNA_exonic
CAediting_201978	chr2_99196552_+	ncRNA_exonic
CAediting_201979	chr2_99196557_+	ncRNA_exonic;splicing
CAediting_201980	chr2_99196565_+	ncRNA_exonic
CAediting_201981	chr2_99196566_+	ncRNA_exonic
CAediting_201982	chr2_99196567_+	ncRNA_exonic
CAediting_201983	chr2_99196568_+	ncRNA_exonic
CAediting_201984	chr2_99196579_+	ncRNA_exonic
CAediting_201985	chr2_99196581_+	ncRNA_exonic
CAediting_201986	chr2_99196588_+	ncRNA_exonic
CAediting_201987	chr2_99196597_+	ncRNA_exonic
CAediting_201988	chr2_99196601_+	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_201884	chr2_99188840_+	SINE	Alu	AluSq
CAediting_201885	chr2_99190298_+	SINE	Alu	AluJr
CAediting_201886	chr2_99190863_+	LINE	L1	L1PA10
CAediting_201887	chr2_99191187_+	SINE	Alu	AluSc5
CAediting_201888	chr2_99192397_+	LINE	L1	L1PA8
CAediting_201889	chr2_99192410_+	LINE	L1	L1PA8
CAediting_201890	chr2_99192411_+	LINE	L1	L1PA8
CAediting_201893	chr2_99195810_+	SINE	Alu	AluSx
CAediting_201894	chr2_99195820_+	SINE	Alu	AluSx
CAediting_201895	chr2_99195826_+	SINE	Alu	AluSx
CAediting_201896	chr2_99195827_+	SINE	Alu	AluSx
CAediting_201897	chr2_99195832_+	SINE	Alu	AluSx
CAediting_201898	chr2_99195835_+	SINE	Alu	AluSx
CAediting_201899	chr2_99195843_+	SINE	Alu	AluSx
CAediting_201900	chr2_99195849_+	SINE	Alu	AluSx
CAediting_201901	chr2_99195862_+	SINE	Alu	AluSx
CAediting_201902	chr2_99195867_+	SINE	Alu	AluSx
CAediting_201903	chr2_99195872_+	SINE	Alu	AluSx
CAediting_201904	chr2_99195875_+	SINE	Alu	AluSx
CAediting_201905	chr2_99195881_+	SINE	Alu	AluSx
CAediting_201906	chr2_99195886_+	SINE	Alu	AluSx
CAediting_201907	chr2_99195892_+	SINE	Alu	AluSx
CAediting_201908	chr2_99195896_+	SINE	Alu	AluSx
CAediting_201909	chr2_99195924_+	SINE	Alu	AluSx
CAediting_201910	chr2_99195927_+	SINE	Alu	AluSx
CAediting_201911	chr2_99195935_+	SINE	Alu	AluSx
CAediting_201912	chr2_99195939_+	SINE	Alu	AluSx
CAediting_201913	chr2_99195943_+	SINE	Alu	AluSx
CAediting_201914	chr2_99195951_+	SINE	Alu	AluSx
CAediting_201915	chr2_99195953_+	SINE	Alu	AluSx
CAediting_201916	chr2_99195961_+	SINE	Alu	AluSx
CAediting_201917	chr2_99195962_+	SINE	Alu	AluSx
CAediting_201918	chr2_99195966_+	SINE	Alu	AluSx
CAediting_201919	chr2_99195977_+	SINE	Alu	AluSx
CAediting_201920	chr2_99195983_+	SINE	Alu	AluSx
CAediting_201921	chr2_99195987_+	SINE	Alu	AluSx
CAediting_201922	chr2_99195990_+	SINE	Alu	AluSx
CAediting_201923	chr2_99195996_+	SINE	Alu	AluSx
CAediting_201924	chr2_99196001_+	SINE	Alu	AluSx
CAediting_201925	chr2_99196002_+	SINE	Alu	AluSx
CAediting_201926	chr2_99196009_+	SINE	Alu	AluSx
CAediting_201927	chr2_99196013_+	SINE	Alu	AluSx
CAediting_201928	chr2_99196015_+	SINE	Alu	AluSx
CAediting_201929	chr2_99196022_+	SINE	Alu	AluSx
CAediting_201930	chr2_99196026_+	SINE	Alu	AluSx
CAediting_201931	chr2_99196031_+	SINE	Alu	AluSx
CAediting_201932	chr2_99196033_+	SINE	Alu	AluSx
CAediting_201933	chr2_99196046_+	SINE	Alu	AluSx
CAediting_201934	chr2_99196076_+	SINE	Alu	AluSx
CAediting_201935	chr2_99196081_+	SINE	Alu	AluSx
CAediting_201936	chr2_99196089_+	SINE	Alu	AluSx
CAediting_201937	chr2_99196320_+	SINE	Alu	AluJb
CAediting_201938	chr2_99196324_+	SINE	Alu	AluJb
CAediting_201939	chr2_99196340_+	SINE	Alu	AluJb
CAediting_201940	chr2_99196344_+	SINE	Alu	AluJb
CAediting_201941	chr2_99196345_+	SINE	Alu	AluJb
CAediting_201942	chr2_99196354_+	SINE	Alu	AluJb
CAediting_201943	chr2_99196356_+	SINE	Alu	AluJb
CAediting_201944	chr2_99196362_+	SINE	Alu	AluJb
CAediting_201945	chr2_99196365_+	SINE	Alu	AluJb
CAediting_201946	chr2_99196370_+	SINE	Alu	AluJb
CAediting_201947	chr2_99196375_+	SINE	Alu	AluJb
CAediting_201948	chr2_99196380_+	SINE	Alu	AluJb
CAediting_201949	chr2_99196387_+	SINE	Alu	AluJb
CAediting_201950	chr2_99196394_+	SINE	Alu	AluJb
CAediting_201951	chr2_99196400_+	SINE	Alu	AluJb
CAediting_201952	chr2_99196401_+	SINE	Alu	AluJb
CAediting_201953	chr2_99196405_+	SINE	Alu	AluJb
CAediting_201954	chr2_99196413_+	SINE	Alu	AluJb
CAediting_201955	chr2_99196425_+	SINE	Alu	AluJb
CAediting_201956	chr2_99196427_+	SINE	Alu	AluJb
CAediting_201957	chr2_99196430_+	SINE	Alu	AluJb
CAediting_201958	chr2_99196434_+	SINE	Alu	AluJb
CAediting_201959	chr2_99196454_+	SINE	Alu	AluJb
CAediting_201960	chr2_99196463_+	SINE	Alu	AluJb
CAediting_201961	chr2_99196467_+	SINE	Alu	AluJb
CAediting_201962	chr2_99196468_+	SINE	Alu	AluJb
CAediting_201963	chr2_99196476_+	SINE	Alu	AluJb
CAediting_201964	chr2_99196477_+	SINE	Alu	AluJb
CAediting_201965	chr2_99196486_+	SINE	Alu	AluJb
CAediting_201966	chr2_99196488_+	SINE	Alu	AluJb
CAediting_201967	chr2_99196490_+	SINE	Alu	AluJb
CAediting_201968	chr2_99196492_+	SINE	Alu	AluJb
CAediting_201969	chr2_99196502_+	SINE	Alu	AluJb
CAediting_201970	chr2_99196514_+	SINE	Alu	AluJb
CAediting_201971	chr2_99196515_+	SINE	Alu	AluJb
CAediting_201972	chr2_99196525_+	SINE	Alu	AluJb
CAediting_201973	chr2_99196526_+	SINE	Alu	AluJb
CAediting_201974	chr2_99196527_+	SINE	Alu	AluJb
CAediting_201975	chr2_99196539_+	SINE	Alu	AluJb
CAediting_201976	chr2_99196540_+	SINE	Alu	AluJb
CAediting_201977	chr2_99196544_+	SINE	Alu	AluJb
CAediting_201978	chr2_99196552_+	SINE	Alu	AluJb
CAediting_201979	chr2_99196557_+	SINE	Alu	AluJb
CAediting_201980	chr2_99196565_+	SINE	Alu	AluJb
CAediting_201981	chr2_99196566_+	SINE	Alu	AluJb
CAediting_201982	chr2_99196567_+	SINE	Alu	AluJb
CAediting_201983	chr2_99196568_+	SINE	Alu	AluJb
CAediting_201984	chr2_99196579_+	SINE	Alu	AluJb
CAediting_201985	chr2_99196581_+	SINE	Alu	AluJb
CAediting_201986	chr2_99196588_+	SINE	Alu	AluJb
CAediting_201987	chr2_99196597_+	SINE	Alu	AluJb
CAediting_201988	chr2_99196601_+	SINE	Alu	AluJb

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RNA A-to-I editing events in the alternative splicing sites for MRPL30

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_201929	chr2_99196022_+	99196020:99196028	5SS	1+0i	GCAGTGAGC	3.29	GCGGTGAGC	8.02
IR	CAediting_201930	chr2_99196026_+	99196020:99196028	5SS	0+4i	GCAGTGAGC	3.29	GCAGTGGGC	-2.2
IR	CAediting_201939	chr2_99196340_+	99196337:99196359	3SS	0+17i	GTCACCCAAGCTGGAATACAGTG	-22.16	GTCGCCCAAGCTGGAATACAGTG	-22.39
IR	CAediting_201940	chr2_99196344_+	99196337:99196359	3SS	0+13i	GTCACCCAAGCTGGAATACAGTG	-22.16	GTCACCCGAGCTGGAATACAGTG	-21.5
IR	CAediting_201941	chr2_99196345_+	99196337:99196359	3SS	0+12i	GTCACCCAAGCTGGAATACAGTG	-22.16	GTCACCCAGGCTGGAATACAGTG	-21.33
IR	CAediting_201942	chr2_99196354_+	99196337:99196359	3SS	0+3i	GTCACCCAAGCTGGAATACAGTG	-22.16	GTCACCCAAGCTGGAATGCAGTG	-33.67
IR	CAediting_201943	chr2_99196356_+	99196337:99196359	3SS	0+1i	GTCACCCAAGCTGGAATACAGTG	-22.16	GTCACCCAAGCTGGAATACGGTG	-13.41

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000185414.18.MRPL30.

Correlation between RNA A-to-I editing and PSI for ENSG00000185414.18.MRPL30.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for MRPL30

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for MRPL30

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for MRPL30

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_201893	chr2_99195810_+	ENSG00000185414.18	ENST00000409841	hsa-miR-1292-3p	99195805	99195811	7mer-m8	99195793	99195812	149.00	-24.64
CAediting_201987	chr2_99196597_+	ENSG00000185414.18	ENST00000409841	hsa-miR-128-3p	99196590	99196596	7mer-m8	99196576	99196597	146.00	-15.25
CAediting_201987	chr2_99196597_+	ENSG00000185414.18	ENST00000409841	hsa-miR-128-3p	99196590	99196596	7mer-m8	99196576	99196597	146.00	-15.25
CAediting_201987	chr2_99196597_+	ENSG00000185414.18	ENST00000409841	hsa-miR-1285-3p	99196595	99196601	7mer-m8	99196584	99196602	143.00	-19.31
CAediting_201987	chr2_99196597_+	ENSG00000185414.18	ENST00000409841	hsa-miR-1285-3p	99196595	99196601	7mer-m8	99196584	99196602	143.00	-19.31
CAediting_201987	chr2_99196597_+	ENSG00000185414.18	ENST00000409841	hsa-miR-216a-3p	99196590	99196596	7mer-m8	99196572	99196597	154.00	-20.21
CAediting_201987	chr2_99196597_+	ENSG00000185414.18	ENST00000409841	hsa-miR-3187-5p	99196595	99196601	7mer-m8	99196582	99196602	160.00	-25.67
CAediting_201987	chr2_99196597_+	ENSG00000185414.18	ENST00000409841	hsa-miR-5189-5p	99196595	99196601	7mer-m8	99196577	99196602	161.00	-25.98
CAediting_201987	chr2_99196597_+	ENSG00000185414.18	ENST00000409841	hsa-miR-612	99196595	99196601	7mer-m8	99196575	99196602	151.00	-26.56
CAediting_201987	chr2_99196597_+	ENSG00000185414.18	ENST00000409841	hsa-miR-6860	99196595	99196601	7mer-m8	99196580	99196602	146.00	-22.08
CAediting_201986	chr2_99196588_+	ENSG00000185414.18	ENST00000409841	hsa-miR-4641	99196583	99196589	7mer-m8	99196566	99196590	156.00	-19.22
CAediting_201986	chr2_99196588_+	ENSG00000185414.18	ENST00000409841	hsa-miR-663b	99196586	99196592	7mer-m8	99196576	99196593	150.00	-27.97
CAediting_201986	chr2_99196588_+	ENSG00000185414.18	ENST00000409841	hsa-miR-6872-3p	99196581	99196587	7mer-m8	99196568	99196588	147.00	-25.39
CAediting_201892	chr2_99195792_+	ENSG00000185414.18	ENST00000409841	hsa-miR-135a-5p	99195789	99195795	7mer-m8	99195774	99195796	157.00	-11.10
CAediting_201892	chr2_99195792_+	ENSG00000185414.18	ENST00000409841	hsa-miR-135a-5p	99195789	99195795	7mer-m8	99195774	99195796	157.00	-11.10
CAediting_201892	chr2_99195792_+	ENSG00000185414.18	ENST00000409841	hsa-miR-135b-5p	99195789	99195795	7mer-m8	99195774	99195796	157.00	-11.00

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_201894	chr2_99195820_+	ENSG00000185414.18	ENST00000409841	hsa-miR-6807-5p	99195813	99195819	7mer-m8	99195798	99195820	144	-25.48
CAediting_201987	chr2_99196597_+	ENSG00000185414.18	ENST00000409841	hsa-miR-1225-5p	99196594	99196600	7mer-m8	99196580	99196601	146	-23.47
CAediting_201988	chr2_99196601_+	ENSG00000185414.18	ENST00000409841	hsa-miR-1225-5p	99196594	99196600	7mer-m8	99196580	99196601	146	-23.47
CAediting_201988	chr2_99196601_+	ENSG00000185414.18	ENST00000409841	hsa-miR-4505	99196597	99196604	8mer-1a	99196587	99196604	140	-21.27
CAediting_201988	chr2_99196601_+	ENSG00000185414.18	ENST00000409841	hsa-miR-5589-5p	99196596	99196602	7mer-m8	99196583	99196603	155	-23.73
CAediting_201988	chr2_99196601_+	ENSG00000185414.18	ENST00000409841	hsa-miR-5787	99196597	99196604	8mer-1a	99196586	99196604	142	-23.63
CAediting_201985	chr2_99196581_+	ENSG00000185414.18	ENST00000409841	hsa-miR-6514-3p	99196578	99196584	7mer-m8	99196565	99196585	155	-17.23
CAediting_201987	chr2_99196597_+	ENSG00000185414.18	ENST00000409841	hsa-miR-6776-5p	99196596	99196601	6mer	99196584	99196602	154	-27.84
CAediting_201988	chr2_99196601_+	ENSG00000185414.18	ENST00000409841	hsa-miR-6776-5p	99196596	99196601	6mer	99196584	99196602	154	-27.84
CAediting_201988	chr2_99196601_+	ENSG00000185414.18	ENST00000409841	hsa-miR-6842-3p	99196598	99196605	8mer-1a	99196581	99196605	142	-19.84
CAediting_201986	chr2_99196588_+	ENSG00000185414.18	ENST00000409841	hsa-miR-6847-3p	99196583	99196589	7mer-m8	99196568	99196590	153	-22.19

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000185414.18	ENST00000409841	hsa-miR-200b-3p	99196866	99196872	7mer-m8	99196851	99196873	158	-15.68
CAediting_688081	chr9_63819627_+	ENSG00000185414.18	ENST00000409841	hsa-miR-4477b	99196845	99196852	8mer-1a	99196832	99196852	143	-10.85

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_524911	chr7_5495852_-	ENSG00000185414.18	ENST00000409841	hsa-miR-589-3p	99196793	99196799	7mer-m8	99196775	99196800	153	-13.35

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for MRPL30

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000338148.6	protein_coding
ENST00000409841.1	nonsense_mediated_decay
ENST00000465432.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_201891	ENST00000338148.6	chr2_99195791_+	-898.50	-898.50	-986.40
CAediting_201892	ENST00000338148.6	chr2_99195792_+	-898.80	-898.50	-986.40
CAediting_201893	ENST00000338148.6	chr2_99195810_+	-898.80	-898.50	-986.40
CAediting_201894	ENST00000338148.6	chr2_99195820_+	-900.30	-898.50	-986.40
CAediting_201895	ENST00000338148.6	chr2_99195826_+	-898.60	-898.50	-986.40
CAediting_201896	ENST00000338148.6	chr2_99195827_+	-898.50	-898.50	-986.40
CAediting_201897	ENST00000338148.6	chr2_99195832_+	-897.80	-898.50	-986.40
CAediting_201898	ENST00000338148.6	chr2_99195835_+	-897.80	-898.50	-986.40
CAediting_201899	ENST00000338148.6	chr2_99195843_+	-897.60	-898.50	-986.40
CAediting_201900	ENST00000338148.6	chr2_99195849_+	-898.10	-898.50	-986.40
CAediting_201901	ENST00000338148.6	chr2_99195862_+	-902.60	-898.50	-986.40
CAediting_201902	ENST00000338148.6	chr2_99195867_+	-897.50	-898.50	-986.40
CAediting_201903	ENST00000338148.6	chr2_99195872_+	-897.80	-898.50	-986.40
CAediting_201904	ENST00000338148.6	chr2_99195875_+	-897.60	-898.50	-986.40
CAediting_201905	ENST00000338148.6	chr2_99195881_+	-897.60	-898.50	-986.40
CAediting_201906	ENST00000338148.6	chr2_99195886_+	-897.80	-898.50	-986.40
CAediting_201907	ENST00000338148.6	chr2_99195892_+	-902.20	-898.50	-986.40
CAediting_201908	ENST00000338148.6	chr2_99195896_+	-898.50	-898.50	-986.40
CAediting_201909	ENST00000338148.6	chr2_99195924_+	-898.60	-898.50	-986.40
CAediting_201910	ENST00000338148.6	chr2_99195927_+	-898.70	-898.50	-986.40
CAediting_201911	ENST00000338148.6	chr2_99195935_+	-898.20	-898.50	-986.40
CAediting_201912	ENST00000338148.6	chr2_99195939_+	-902.30	-898.50	-986.40
CAediting_201913	ENST00000338148.6	chr2_99195943_+	-902.90	-898.50	-986.40
CAediting_201914	ENST00000338148.6	chr2_99195951_+	-898.10	-898.50	-986.40
CAediting_201915	ENST00000338148.6	chr2_99195953_+	-898.10	-898.50	-986.40
CAediting_201916	ENST00000338148.6	chr2_99195961_+	-897.80	-898.50	-986.40
CAediting_201917	ENST00000338148.6	chr2_99195962_+	-902.40	-898.50	-986.40
CAediting_201918	ENST00000338148.6	chr2_99195966_+	-897.80	-898.50	-986.40
CAediting_201919	ENST00000338148.6	chr2_99195977_+	-897.60	-898.50	-986.40
CAediting_201920	ENST00000338148.6	chr2_99195983_+	-897.60	-898.50	-986.40
CAediting_201921	ENST00000338148.6	chr2_99195987_+	-903.20	-898.50	-986.40
CAediting_201922	ENST00000338148.6	chr2_99195990_+	-897.60	-898.50	-986.40
CAediting_201923	ENST00000338148.6	chr2_99195996_+	-898.10	-898.50	-986.40
CAediting_201924	ENST00000338148.6	chr2_99196001_+	-897.60	-898.50	-986.40
CAediting_201925	ENST00000338148.6	chr2_99196002_+	-905.20	-898.50	-986.40
CAediting_201926	ENST00000338148.6	chr2_99196009_+	-897.60	-898.50	-986.40
CAediting_201927	ENST00000338148.6	chr2_99196013_+	-898.50	-898.50	-986.40
CAediting_201928	ENST00000338148.6	chr2_99196015_+	-897.60	-898.50	-986.40
CAediting_201929	ENST00000338148.6	chr2_99196022_+	-897.80	-898.50	-986.40
CAediting_201930	ENST00000338148.6	chr2_99196026_+	-897.50	-898.50	-986.40
CAediting_201931	ENST00000338148.6	chr2_99196031_+	-897.50	-898.50	-986.40
CAediting_201932	ENST00000338148.6	chr2_99196033_+	-898.00	-898.50	-986.40
CAediting_201933	ENST00000338148.6	chr2_99196046_+	-898.20	-898.50	-986.40
CAediting_201934	ENST00000338148.6	chr2_99196076_+	-901.90	-898.50	-986.40
CAediting_201935	ENST00000338148.6	chr2_99196081_+	-897.70	-898.50	-986.40
CAediting_201936	ENST00000338148.6	chr2_99196089_+	-899.40	-898.50	-986.40
CAediting_201937	ENST00000338148.6	chr2_99196320_+	-898.90	-898.50	-986.40
CAediting_201938	ENST00000338148.6	chr2_99196324_+	-902.30	-898.50	-986.40
CAediting_201939	ENST00000338148.6	chr2_99196340_+	-898.10	-898.50	-986.40
CAediting_201940	ENST00000338148.6	chr2_99196344_+	-897.80	-898.50	-986.40
CAediting_201941	ENST00000338148.6	chr2_99196345_+	-905.10	-898.50	-986.40
CAediting_201942	ENST00000338148.6	chr2_99196354_+	-898.50	-898.50	-986.40
CAediting_201943	ENST00000338148.6	chr2_99196356_+	-897.80	-898.50	-986.40
CAediting_201944	ENST00000338148.6	chr2_99196362_+	-895.10	-898.50	-986.40
CAediting_201945	ENST00000338148.6	chr2_99196365_+	-898.80	-898.50	-986.40
CAediting_201946	ENST00000338148.6	chr2_99196370_+	-897.80	-898.50	-986.40
CAediting_201947	ENST00000338148.6	chr2_99196375_+	-898.10	-898.50	-986.40
CAediting_201948	ENST00000338148.6	chr2_99196380_+	-897.70	-898.50	-986.40
CAediting_201949	ENST00000338148.6	chr2_99196387_+	-901.00	-898.50	-986.40
CAediting_201950	ENST00000338148.6	chr2_99196394_+	-904.70	-898.50	-986.40
CAediting_201951	ENST00000338148.6	chr2_99196400_+	-898.20	-898.50	-986.40
CAediting_201952	ENST00000338148.6	chr2_99196401_+	-898.20	-898.50	-986.40
CAediting_201953	ENST00000338148.6	chr2_99196405_+	-897.90	-898.50	-986.40
CAediting_201954	ENST00000338148.6	chr2_99196413_+	-902.40	-898.50	-986.40
CAediting_201955	ENST00000338148.6	chr2_99196425_+	-900.40	-898.50	-986.40
CAediting_201956	ENST00000338148.6	chr2_99196427_+	-897.60	-898.50	-986.40
CAediting_201957	ENST00000338148.6	chr2_99196430_+	-898.20	-898.50	-986.40
CAediting_201958	ENST00000338148.6	chr2_99196434_+	-904.30	-898.50	-986.40
CAediting_201959	ENST00000338148.6	chr2_99196454_+	-898.10	-898.50	-986.40
CAediting_201960	ENST00000338148.6	chr2_99196463_+	-902.70	-898.50	-986.40
CAediting_201961	ENST00000338148.6	chr2_99196467_+	-898.60	-898.50	-986.40
CAediting_201962	ENST00000338148.6	chr2_99196468_+	-898.50	-898.50	-986.40
CAediting_201963	ENST00000338148.6	chr2_99196476_+	-898.50	-898.50	-986.40
CAediting_201964	ENST00000338148.6	chr2_99196477_+	-898.50	-898.50	-986.40
CAediting_201965	ENST00000338148.6	chr2_99196486_+	-899.90	-898.50	-986.40
CAediting_201966	ENST00000338148.6	chr2_99196488_+	-898.20	-898.50	-986.40
CAediting_201967	ENST00000338148.6	chr2_99196490_+	-897.60	-898.50	-986.40
CAediting_201968	ENST00000338148.6	chr2_99196492_+	-897.30	-898.50	-986.40
CAediting_201969	ENST00000338148.6	chr2_99196502_+	-899.50	-898.50	-986.40
CAediting_201970	ENST00000338148.6	chr2_99196514_+	-898.30	-898.50	-986.40
CAediting_201971	ENST00000338148.6	chr2_99196515_+	-905.10	-898.50	-986.40
CAediting_201972	ENST00000338148.6	chr2_99196525_+	-904.50	-898.50	-986.40
CAediting_201973	ENST00000338148.6	chr2_99196526_+	-898.80	-898.50	-986.40
CAediting_201974	ENST00000338148.6	chr2_99196527_+	-898.50	-898.50	-986.40
CAediting_201975	ENST00000338148.6	chr2_99196539_+	-897.80	-898.50	-986.40
CAediting_201976	ENST00000338148.6	chr2_99196540_+	-905.10	-898.50	-986.40
CAediting_201977	ENST00000338148.6	chr2_99196544_+	-898.80	-898.50	-986.40
CAediting_201978	ENST00000338148.6	chr2_99196552_+	-903.90	-898.50	-986.40
CAediting_201979	ENST00000338148.6	chr2_99196557_+	-902.10	-898.50	-986.40
CAediting_201980	ENST00000338148.6	chr2_99196565_+	-898.20	-898.50	-986.40
CAediting_201981	ENST00000338148.6	chr2_99196566_+	-898.60	-898.50	-986.40
CAediting_201982	ENST00000338148.6	chr2_99196567_+	-898.20	-898.50	-986.40
CAediting_201983	ENST00000338148.6	chr2_99196568_+	-904.70	-898.50	-986.40
CAediting_201984	ENST00000338148.6	chr2_99196579_+	-898.50	-898.50	-986.40
CAediting_201985	ENST00000338148.6	chr2_99196581_+	-897.80	-898.50	-986.40
CAediting_201986	ENST00000338148.6	chr2_99196588_+	-897.60	-898.50	-986.40
CAediting_201987	ENST00000338148.6	chr2_99196597_+	-905.20	-898.50	-986.40
CAediting_201988	ENST00000338148.6	chr2_99196601_+	-904.70	-898.50	-986.40
CAediting_201891	ENST00000409841.1	chr2_99195791_+	-396.30	-396.30	-413.00
CAediting_201892	ENST00000409841.1	chr2_99195792_+	-396.60	-396.30	-413.00
CAediting_201893	ENST00000409841.1	chr2_99195810_+	-396.60	-396.30	-413.00
CAediting_201894	ENST00000409841.1	chr2_99195820_+	-398.10	-396.30	-413.00
CAediting_201980	ENST00000409841.1	chr2_99196565_+	-395.60	-396.30	-413.00
CAediting_201981	ENST00000409841.1	chr2_99196566_+	-399.00	-396.30	-413.00
CAediting_201982	ENST00000409841.1	chr2_99196567_+	-396.30	-396.30	-413.00
CAediting_201983	ENST00000409841.1	chr2_99196568_+	-396.30	-396.30	-413.00
CAediting_201984	ENST00000409841.1	chr2_99196579_+	-396.50	-396.30	-413.00
CAediting_201985	ENST00000409841.1	chr2_99196581_+	-396.70	-396.30	-413.00
CAediting_201986	ENST00000409841.1	chr2_99196588_+	-395.40	-396.30	-413.00
CAediting_201987	ENST00000409841.1	chr2_99196597_+	-403.00	-396.30	-413.00
CAediting_201988	ENST00000409841.1	chr2_99196601_+	-402.50	-396.30	-413.00
CAediting_201891	ENST00000465432.1	chr2_99195791_+	-608.40	-608.40	-695.20
CAediting_201892	ENST00000465432.1	chr2_99195792_+	-609.10	-608.40	-695.20
CAediting_201893	ENST00000465432.1	chr2_99195810_+	-608.70	-608.40	-695.20
CAediting_201894	ENST00000465432.1	chr2_99195820_+	-610.20	-608.40	-695.20
CAediting_201895	ENST00000465432.1	chr2_99195826_+	-608.50	-608.40	-695.20
CAediting_201896	ENST00000465432.1	chr2_99195827_+	-608.40	-608.40	-695.20
CAediting_201897	ENST00000465432.1	chr2_99195832_+	-607.70	-608.40	-695.20
CAediting_201898	ENST00000465432.1	chr2_99195835_+	-607.70	-608.40	-695.20
CAediting_201899	ENST00000465432.1	chr2_99195843_+	-607.50	-608.40	-695.20
CAediting_201900	ENST00000465432.1	chr2_99195849_+	-608.00	-608.40	-695.20
CAediting_201901	ENST00000465432.1	chr2_99195862_+	-612.50	-608.40	-695.20
CAediting_201902	ENST00000465432.1	chr2_99195867_+	-607.40	-608.40	-695.20
CAediting_201903	ENST00000465432.1	chr2_99195872_+	-607.70	-608.40	-695.20
CAediting_201904	ENST00000465432.1	chr2_99195875_+	-607.50	-608.40	-695.20
CAediting_201905	ENST00000465432.1	chr2_99195881_+	-607.50	-608.40	-695.20
CAediting_201906	ENST00000465432.1	chr2_99195886_+	-607.70	-608.40	-695.20
CAediting_201907	ENST00000465432.1	chr2_99195892_+	-612.10	-608.40	-695.20
CAediting_201908	ENST00000465432.1	chr2_99195896_+	-608.40	-608.40	-695.20
CAediting_201909	ENST00000465432.1	chr2_99195924_+	-608.50	-608.40	-695.20
CAediting_201910	ENST00000465432.1	chr2_99195927_+	-608.60	-608.40	-695.20
CAediting_201911	ENST00000465432.1	chr2_99195935_+	-608.10	-608.40	-695.20
CAediting_201912	ENST00000465432.1	chr2_99195939_+	-612.20	-608.40	-695.20
CAediting_201913	ENST00000465432.1	chr2_99195943_+	-612.80	-608.40	-695.20
CAediting_201914	ENST00000465432.1	chr2_99195951_+	-608.00	-608.40	-695.20
CAediting_201915	ENST00000465432.1	chr2_99195953_+	-608.00	-608.40	-695.20
CAediting_201916	ENST00000465432.1	chr2_99195961_+	-607.70	-608.40	-695.20
CAediting_201917	ENST00000465432.1	chr2_99195962_+	-612.30	-608.40	-695.20
CAediting_201918	ENST00000465432.1	chr2_99195966_+	-607.70	-608.40	-695.20
CAediting_201919	ENST00000465432.1	chr2_99195977_+	-607.50	-608.40	-695.20
CAediting_201920	ENST00000465432.1	chr2_99195983_+	-607.50	-608.40	-695.20
CAediting_201921	ENST00000465432.1	chr2_99195987_+	-613.10	-608.40	-695.20
CAediting_201922	ENST00000465432.1	chr2_99195990_+	-607.50	-608.40	-695.20
CAediting_201923	ENST00000465432.1	chr2_99195996_+	-608.00	-608.40	-695.20
CAediting_201924	ENST00000465432.1	chr2_99196001_+	-607.50	-608.40	-695.20
CAediting_201925	ENST00000465432.1	chr2_99196002_+	-615.10	-608.40	-695.20
CAediting_201926	ENST00000465432.1	chr2_99196009_+	-607.50	-608.40	-695.20
CAediting_201927	ENST00000465432.1	chr2_99196013_+	-608.40	-608.40	-695.20
CAediting_201928	ENST00000465432.1	chr2_99196015_+	-607.50	-608.40	-695.20
CAediting_201929	ENST00000465432.1	chr2_99196022_+	-609.80	-608.40	-695.20
CAediting_201944	ENST00000465432.1	chr2_99196362_+	-609.70	-608.40	-695.20
CAediting_201945	ENST00000465432.1	chr2_99196365_+	-608.40	-608.40	-695.20
CAediting_201946	ENST00000465432.1	chr2_99196370_+	-607.10	-608.40	-695.20
CAediting_201947	ENST00000465432.1	chr2_99196375_+	-608.00	-608.40	-695.20
CAediting_201948	ENST00000465432.1	chr2_99196380_+	-607.60	-608.40	-695.20
CAediting_201949	ENST00000465432.1	chr2_99196387_+	-610.90	-608.40	-695.20
CAediting_201950	ENST00000465432.1	chr2_99196394_+	-614.60	-608.40	-695.20
CAediting_201951	ENST00000465432.1	chr2_99196400_+	-608.10	-608.40	-695.20
CAediting_201952	ENST00000465432.1	chr2_99196401_+	-608.10	-608.40	-695.20
CAediting_201953	ENST00000465432.1	chr2_99196405_+	-607.80	-608.40	-695.20
CAediting_201954	ENST00000465432.1	chr2_99196413_+	-612.30	-608.40	-695.20
CAediting_201955	ENST00000465432.1	chr2_99196425_+	-610.30	-608.40	-695.20
CAediting_201956	ENST00000465432.1	chr2_99196427_+	-607.50	-608.40	-695.20
CAediting_201957	ENST00000465432.1	chr2_99196430_+	-608.10	-608.40	-695.20
CAediting_201958	ENST00000465432.1	chr2_99196434_+	-614.20	-608.40	-695.20
CAediting_201959	ENST00000465432.1	chr2_99196454_+	-608.00	-608.40	-695.20
CAediting_201960	ENST00000465432.1	chr2_99196463_+	-612.60	-608.40	-695.20
CAediting_201961	ENST00000465432.1	chr2_99196467_+	-608.50	-608.40	-695.20
CAediting_201962	ENST00000465432.1	chr2_99196468_+	-608.40	-608.40	-695.20
CAediting_201963	ENST00000465432.1	chr2_99196476_+	-608.40	-608.40	-695.20
CAediting_201964	ENST00000465432.1	chr2_99196477_+	-608.40	-608.40	-695.20
CAediting_201965	ENST00000465432.1	chr2_99196486_+	-609.80	-608.40	-695.20
CAediting_201966	ENST00000465432.1	chr2_99196488_+	-608.10	-608.40	-695.20
CAediting_201967	ENST00000465432.1	chr2_99196490_+	-607.50	-608.40	-695.20
CAediting_201968	ENST00000465432.1	chr2_99196492_+	-607.20	-608.40	-695.20
CAediting_201969	ENST00000465432.1	chr2_99196502_+	-609.40	-608.40	-695.20
CAediting_201970	ENST00000465432.1	chr2_99196514_+	-608.20	-608.40	-695.20
CAediting_201971	ENST00000465432.1	chr2_99196515_+	-615.00	-608.40	-695.20
CAediting_201972	ENST00000465432.1	chr2_99196525_+	-614.40	-608.40	-695.20
CAediting_201973	ENST00000465432.1	chr2_99196526_+	-608.70	-608.40	-695.20
CAediting_201974	ENST00000465432.1	chr2_99196527_+	-608.40	-608.40	-695.20
CAediting_201975	ENST00000465432.1	chr2_99196539_+	-607.70	-608.40	-695.20
CAediting_201976	ENST00000465432.1	chr2_99196540_+	-615.00	-608.40	-695.20
CAediting_201977	ENST00000465432.1	chr2_99196544_+	-608.70	-608.40	-695.20
CAediting_201978	ENST00000465432.1	chr2_99196552_+	-613.80	-608.40	-695.20
CAediting_201979	ENST00000465432.1	chr2_99196557_+	-612.00	-608.40	-695.20
CAediting_201980	ENST00000465432.1	chr2_99196565_+	-608.10	-608.40	-695.20
CAediting_201981	ENST00000465432.1	chr2_99196566_+	-608.50	-608.40	-695.20
CAediting_201982	ENST00000465432.1	chr2_99196567_+	-608.10	-608.40	-695.20
CAediting_201983	ENST00000465432.1	chr2_99196568_+	-614.60	-608.40	-695.20
CAediting_201984	ENST00000465432.1	chr2_99196579_+	-608.40	-608.40	-695.20
CAediting_201985	ENST00000465432.1	chr2_99196581_+	-607.70	-608.40	-695.20
CAediting_201986	ENST00000465432.1	chr2_99196588_+	-607.50	-608.40	-695.20
CAediting_201987	ENST00000465432.1	chr2_99196597_+	-615.10	-608.40	-695.20
CAediting_201988	ENST00000465432.1	chr2_99196601_+	-614.60	-608.40	-695.20

Top

Relation with ADAR for MRPL30

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_201893	chr2_99195810_+	4.85322002500767e-06	0.34835736901083	0.00641990359863507	0.212024328071699	.	.
LIHC	CAediting_201893	chr2_99195810_+	0.000989105251070702	0.330961599053818	.	.	.	.
LUAD	CAediting_201893	chr2_99195810_+	7.37312827802821e-11	0.672291954598539	.	.	.	.
LUSC	CAediting_201893	chr2_99195810_+	0.0116796562929566	0.34079094502734	.	.	.	.
STAD	CAediting_201893	chr2_99195810_+	0.000259745710908413	0.494767893756138	.	.	.	.
KIRC	CAediting_201893	chr2_99195810_+	0.00398410618193606	0.328714758901812	.	.	.	.
BLCA	CAediting_201895	chr2_99195826_+	0.0195140420008089	0.211234626320331	.	.	.	.
LGG	CAediting_201895	chr2_99195826_+	4.56170829846014e-09	0.575272386323564	.	.	.	.
BRCA	CAediting_201895	chr2_99195826_+	4.11978388995102e-48	0.532304320136583	.	.	.	.
LIHC	CAediting_201895	chr2_99195826_+	0.000601967771226233	0.237056237778731	.	.	.	.
CESC	CAediting_201895	chr2_99195826_+	8.11843554505977e-05	0.354694547649051	.	.	.	.
LUAD	CAediting_201895	chr2_99195826_+	8.44377194994321e-11	0.418858935327056	.	.	.	.
COAD	CAediting_201895	chr2_99195826_+	0.00107439406870229	0.284720217602099	.	.	.	.
LUSC	CAediting_201895	chr2_99195826_+	1.70275689251821e-08	0.384776612924626	.	.	.	.
GBM	CAediting_201895	chr2_99195826_+	0.00796823364629962	0.326382520043396	.	.	.	.
PRAD	CAediting_201895	chr2_99195826_+	0.00432062341646903	0.393124302272877	.	.	.	.
HNSC	CAediting_201895	chr2_99195826_+	2.4471977555063e-05	0.296492432692911	.	.	.	.
STAD	CAediting_201895	chr2_99195826_+	2.42087165202842e-14	0.448068654294111	.	.	.	.
KIRC	CAediting_201895	chr2_99195826_+	0.000887496035468351	0.184080649165547	.	.	.	.
UCEC	CAediting_201895	chr2_99195826_+	4.08188159380498e-05	0.329456006720892	.	.	.	.
ESCA	CAediting_201895	chr2_99195826_+	8.04944424909358e-06	0.381747219867869	.	.	.	.
OV	CAediting_201895	chr2_99195826_+	4.84553738409991e-09	0.320738011566801	.	.	.	.
PAAD	CAediting_201895	chr2_99195826_+	0.00695162307864494	0.353710350908511	.	.	.	.
SKCM	CAediting_201895	chr2_99195826_+	0.00270117836457357	0.264062447389749	.	.	.	.
SARC	CAediting_201895	chr2_99195826_+	5.19999817790423e-06	0.498977398352319	.	.	.	.
TGCT	CAediting_201895	chr2_99195826_+	4.28555221359557e-09	0.632434385782015	.	.	.	.
BRCA	CAediting_201896	chr2_99195827_+	8.77715462005313e-17	0.439518388872954	.	.	.	.
LIHC	CAediting_201896	chr2_99195827_+	0.000101364866465796	0.362115821419316	.	.	.	.
LUAD	CAediting_201896	chr2_99195827_+	0.00590017801674923	0.288068466303475	.	.	.	.
LUSC	CAediting_201896	chr2_99195827_+	0.0191703372896772	0.263051965385807	.	.	.	.
STAD	CAediting_201896	chr2_99195827_+	0.000163238824057253	0.285221610118364	.	.	.	.
UCEC	CAediting_201896	chr2_99195827_+	0.006404360486411	0.322894284581963	.	.	.	.
ESCA	CAediting_201896	chr2_99195827_+	0.000192813895491165	0.407588197601354	.	.	.	.
OV	CAediting_201896	chr2_99195827_+	0.0187147138259062	0.164101154653474	.	.	.	.
BRCA	CAediting_201911	chr2_99195935_+	5.36054443018045e-18	0.382876338850942	.	.	.	.
LIHC	CAediting_201911	chr2_99195935_+	9.40181868009075e-05	0.305664831492234	.	.	.	.
CESC	CAediting_201911	chr2_99195935_+	0.000809456321797573	0.399544372011077	.	.	.	.
LUAD	CAediting_201911	chr2_99195935_+	1.62679428834986e-08	0.411949816048799	.	.	.	.
LUSC	CAediting_201911	chr2_99195935_+	7.21613737693652e-06	0.433942503266913	.	.	.	.
STAD	CAediting_201911	chr2_99195935_+	0.0494112826380075	0.194142657911806	.	.	.	.
UCEC	CAediting_201911	chr2_99195935_+	0.0304176626043044	0.212396325629918	.	.	.	.
OV	CAediting_201911	chr2_99195935_+	1.34059013386677e-06	0.381542302734536	.	.	.	.
SKCM	CAediting_201911	chr2_99195935_+	4.602758915775e-06	0.501392540593828	.	.	.	.
SARC	CAediting_201911	chr2_99195935_+	0.0132592460940994	0.332053607958361	.	.	.	.
TGCT	CAediting_201911	chr2_99195935_+	1.74484460977253e-06	0.580927543679928	.	.	.	.
OV	CAediting_201914	chr2_99195951_+	.	.	.	.	0.0437007547447272	0.106817327178723
BLCA	CAediting_201918	chr2_99195966_+	0.00199774566109141	0.313213031240999	.	.	.	.
LGG	CAediting_201918	chr2_99195966_+	7.51135047435388e-05	0.253257312172872	.	.	.	.
BRCA	CAediting_201918	chr2_99195966_+	3.50312195459411e-25	0.402976666519878	.	.	.	.
LIHC	CAediting_201918	chr2_99195966_+	0.00215657695801116	0.232399176920867	.	.	.	.
LUAD	CAediting_201918	chr2_99195966_+	0.000256712168123522	0.254528504123776	.	.	.	.
LUSC	CAediting_201918	chr2_99195966_+	0.000113710824222918	0.287608670892164	.	.	.	.
GBM	CAediting_201918	chr2_99195966_+	2.95050347069357e-06	0.443990790851749	.	.	.	.
HNSC	CAediting_201918	chr2_99195966_+	0.00140181468280728	0.245962534256213	.	.	.	.
STAD	CAediting_201918	chr2_99195966_+	4.23885137015865e-08	0.332422109490551	.	.	.	.
UCEC	CAediting_201918	chr2_99195966_+	0.00111505086538987	0.243734337251554	0.0230610729214783	0.17124315954941	.	.
ESCA	CAediting_201918	chr2_99195966_+	1.20433019819898e-07	0.44886439921539	.	.	.	.
OV	CAediting_201918	chr2_99195966_+	1.6970289924674e-09	0.348376382277068	.	.	.	.
PAAD	CAediting_201918	chr2_99195966_+	0.0464139784585138	0.27482900858167	.	.	.	.
SKCM	CAediting_201918	chr2_99195966_+	4.09424608271837e-08	0.484519416611587	.	.	.	.
LGG	CAediting_201921	chr2_99195987_+	.	.	0.00405631708644336	0.248554070431079	.	.
BRCA	CAediting_201921	chr2_99195987_+	4.60608410779806e-13	0.316382796971809	.	.	.	.
CESC	CAediting_201921	chr2_99195987_+	0.0276614003487501	0.263274209624073	.	.	.	.
LUAD	CAediting_201921	chr2_99195987_+	6.35201809954124e-05	0.314565978945343	.	.	.	.
GBM	CAediting_201921	chr2_99195987_+	0.0333665014271624	0.202145697855142	0.00877846740980646	0.247649038859589	.	.
PRAD	CAediting_201921	chr2_99195987_+	.	.	0.0343509257637034	0.182956601006571	.	.
STAD	CAediting_201921	chr2_99195987_+	9.15765451907595e-05	0.233270192476998	2.47180697192612e-06	0.279145937658696	.	.
UCEC	CAediting_201921	chr2_99195987_+	.	.	1.82788063244675e-05	0.323123239225987	.	.
ESCA	CAediting_201921	chr2_99195987_+	0.000129659073626061	0.315700756311571	.	.	.	.
OV	CAediting_201921	chr2_99195987_+	6.88533528260263e-07	0.279281526554281	.	.	.	.
SKCM	CAediting_201921	chr2_99195987_+	.	.	4.59141045562707e-05	0.34694448806203	.	.
SARC	CAediting_201921	chr2_99195987_+	0.0203769365425807	0.242837771962473	1.49922205699214e-06	0.479719074693577	.	.
BLCA	CAediting_201924	chr2_99196001_+	0.0111145805547085	0.282515285796119	.	.	.	.
LGG	CAediting_201924	chr2_99196001_+	7.95760198725536e-05	0.344139365876925	.	.	.	.
BRCA	CAediting_201924	chr2_99196001_+	5.73374893034691e-13	0.278871530247095	.	.	.	.
CESC	CAediting_201924	chr2_99196001_+	0.0239472729409287	0.257181752090421	.	.	.	.
LUAD	CAediting_201924	chr2_99196001_+	0.000376344452578294	0.283886835101535	.	.	.	.
HNSC	CAediting_201924	chr2_99196001_+	0.00206094790864219	0.241126265204182	.	.	.	.
STAD	CAediting_201924	chr2_99196001_+	3.21137057230697e-05	0.242399092183646	.	.	.	.
ESCA	CAediting_201924	chr2_99196001_+	0.00191316904224578	0.253922340998756	.	.	.	.
OV	CAediting_201924	chr2_99196001_+	0.00237374323738531	0.172009539458867	.	.	.	.
BLCA	CAediting_201925	chr2_99196002_+	0.00320831013588731	0.248280579421992	.	.	.	.
LGG	CAediting_201925	chr2_99196002_+	5.9057182713037e-05	0.243247846166641	0.000310446354207336	0.219050796727826	.	.
BRCA	CAediting_201925	chr2_99196002_+	7.54426480506949e-23	0.379831902251809	.	.	.	.
LIHC	CAediting_201925	chr2_99196002_+	.	.	.	.	0.00791440421794585	0.238427124487686
CESC	CAediting_201925	chr2_99196002_+	0.00416599996905414	0.250675507751713	.	.	.	.
LUAD	CAediting_201925	chr2_99196002_+	5.13135218657657e-06	0.298654088836109	.	.	.	.
LUSC	CAediting_201925	chr2_99196002_+	5.01512059836123e-05	0.260756587425453	0.0021247870089748	0.199036062449284	.	.
GBM	CAediting_201925	chr2_99196002_+	9.87829487667241e-06	0.359087406252753	0.00022488033155092	0.30282903330551	.	.
PRAD	CAediting_201925	chr2_99196002_+	.	.	0.0400519854497461	0.144960675790472	.	.
HNSC	CAediting_201925	chr2_99196002_+	0.0134516704108881	0.171964901165051	.	.	.	.
STAD	CAediting_201925	chr2_99196002_+	3.44201324170612e-05	0.242741704928017	0.000932503469876797	0.1950462785728	.	.
UCEC	CAediting_201925	chr2_99196002_+	0.0225149834729421	0.152065718778149	0.024567596138128	0.149862954904796	.	.
ESCA	CAediting_201925	chr2_99196002_+	2.04001973253721e-05	0.348123907542178	0.00371521282478954	0.241150917701498	.	.
OV	CAediting_201925	chr2_99196002_+	0.000108900877916829	0.217335239429119	.	.	.	.
SKCM	CAediting_201925	chr2_99196002_+	0.000401269721123413	0.246094832947238	0.00622097100982909	0.191425675766134	.	.
SARC	CAediting_201925	chr2_99196002_+	0.0414415070670486	0.205354235025383	.	.	.	.
TGCT	CAediting_201925	chr2_99196002_+	0.000470450660531123	0.430996368410658	.	.	.	.
BRCA	CAediting_201930	chr2_99196026_+	0.00662365672306194	0.240720293235753	.	.	.	.
LIHC	CAediting_201930	chr2_99196026_+	0.0325137665652332	0.219580130281882	.	.	.	.
BRCA	CAediting_201931	chr2_99196031_+	0.0189800605177006	0.279803766298649	.	.	.	.
LIHC	CAediting_201931	chr2_99196031_+	0.0224866654767404	0.224715107845709	.	.	.	.
BRCA	CAediting_201933	chr2_99196046_+	.	.	0.000191576705876262	0.449906944101085	.	.
LIHC	CAediting_201933	chr2_99196046_+	0.00116509448433503	0.286072088446308	.	.	.	.
BLCA	CAediting_201938	chr2_99196324_+	0.0254133538171928	0.239587467364801	.	.	.	.
LGG	CAediting_201938	chr2_99196324_+	3.73229417347976e-08	0.574768105807495	.	.	.	.
BRCA	CAediting_201938	chr2_99196324_+	1.12323063952434e-24	0.478990414118347	.	.	.	.
LIHC	CAediting_201938	chr2_99196324_+	1.94152458379907e-05	0.274161203585319	.	.	.	.
LUAD	CAediting_201938	chr2_99196324_+	1.07809387962173e-09	0.463778123244991	.	.	.	.
LUSC	CAediting_201938	chr2_99196324_+	5.59710752961375e-07	0.498885918374746	.	.	.	.
HNSC	CAediting_201938	chr2_99196324_+	0.00362882652322653	0.27388660799339	.	.	.	.
STAD	CAediting_201938	chr2_99196324_+	0.010621499947005	0.291504799332711	.	.	.	.
THCA	CAediting_201938	chr2_99196324_+	0.00135819577145399	0.336287495690684	.	.	.	.
KIRC	CAediting_201938	chr2_99196324_+	0.000633188305642837	0.2150849458734	.	.	.	.
OV	CAediting_201938	chr2_99196324_+	7.28399892758885e-05	0.317079361254058	.	.	.	.
SKCM	CAediting_201938	chr2_99196324_+	0.000318506263334902	0.445709724386763	.	.	.	.
TGCT	CAediting_201938	chr2_99196324_+	2.95202120335161e-08	0.652015170861679	.	.	.	.
LGG	CAediting_201941	chr2_99196345_+	0.0229677245019368	0.264127217535544	0.00327938600187088	0.337456377075361	.	.
BRCA	CAediting_201941	chr2_99196345_+	4.12179270872373e-05	0.222389527697854	.	.	.	.
COAD	CAediting_201941	chr2_99196345_+	3.25902415036904e-05	0.317440416169551	.	.	.	.
GBM	CAediting_201941	chr2_99196345_+	4.75978960934776e-09	0.441026283491929	.	.	.	.
STAD	CAediting_201941	chr2_99196345_+	8.8248879283989e-17	0.43409090285162	0.0136835344385204	0.134793396808904	.	.
UCEC	CAediting_201941	chr2_99196345_+	1.0147517048659e-05	0.251776655271659	.	.	.	.
ESCA	CAediting_201941	chr2_99196345_+	3.74222072496259e-06	0.35743200128552	0.0344848306918189	0.167812475357365	.	.
OV	CAediting_201941	chr2_99196345_+	4.53089568916493e-13	0.365453901189389	.	.	.	.
SKCM	CAediting_201941	chr2_99196345_+	.	.	0.025869768537515	0.282925554648199	.	.
LGG	CAediting_201942	chr2_99196354_+	0.00167621330119295	0.264161691302505	.	.	.	.
BRCA	CAediting_201942	chr2_99196354_+	5.44571980985215e-43	0.481435595063	.	.	.	.
LUAD	CAediting_201942	chr2_99196354_+	0.00210753661353483	0.198773837362441	.	.	.	.
LUSC	CAediting_201942	chr2_99196354_+	3.06044001478664e-09	0.358482469368996	.	.	.	.
GBM	CAediting_201942	chr2_99196354_+	0.00158496889895138	0.260035289983995	.	.	.	.
PRAD	CAediting_201942	chr2_99196354_+	2.61427512909232e-05	0.346169728951435	.	.	.	.
HNSC	CAediting_201942	chr2_99196354_+	0.00152398431186458	0.199870247376956	.	.	.	.
STAD	CAediting_201942	chr2_99196354_+	4.6369502822478e-14	0.394349964175366	.	.	.	.
UCEC	CAediting_201942	chr2_99196354_+	0.000406429043632709	0.192385250195482	.	.	.	.
ESCA	CAediting_201942	chr2_99196354_+	7.42884058820102e-07	0.380667313901944	.	.	.	.
OV	CAediting_201942	chr2_99196354_+	1.39548807816088e-11	0.346319425438666	.	.	.	.
PCPG	CAediting_201942	chr2_99196354_+	0.000444316994919598	0.358810921934701	.	.	.	.
SKCM	CAediting_201942	chr2_99196354_+	0.0176772506135884	0.179673331509034	.	.	.	.
TGCT	CAediting_201942	chr2_99196354_+	0.000120627891373544	0.409567300420353	.	.	.	.
BRCA	CAediting_201947	chr2_99196375_+	.	.	.	.	0.015117119857759	0.227070952104665
STAD	CAediting_201947	chr2_99196375_+	0.00735541575928418	0.273354258785116	.	.	.	.
BRCA	CAediting_201948	chr2_99196380_+	0.0193428367459614	0.0709645116848721	.	.	.	.
CESC	CAediting_201948	chr2_99196380_+	0.0211848574695344	0.134602567379095	.	.	.	.
PRAD	CAediting_201948	chr2_99196380_+	.	.	.	.	0.0279912649207633	0.0995823797575288
STAD	CAediting_201948	chr2_99196380_+	0.00786126189125848	0.139115980396458	.	.	.	.
KIRC	CAediting_201948	chr2_99196380_+	0.00392706452581056	0.127996565466576	.	.	0.0380424398738439	0.0922496355981098
OV	CAediting_201948	chr2_99196380_+	0.0094859024379667	0.133798847188397	.	.	.	.
UCS	CAediting_201948	chr2_99196380_+	0.00275042077060273	0.396192658595764	.	.	.	.
TGCT	CAediting_201948	chr2_99196380_+	0.012270127485001	0.208212146877579	.	.	.	.
BLCA	CAediting_201950	chr2_99196394_+	1.10468016668922e-19	0.463041426033547	.	.	0.000336350532372652	0.192214578762174
LGG	CAediting_201950	chr2_99196394_+	1.42873028925142e-06	0.213850295193482	5.09260569699776e-06	0.202563142849594	.	.
BRCA	CAediting_201950	chr2_99196394_+	7.45644587390433e-79	0.532816284135401	.	.	.	.
LIHC	CAediting_201950	chr2_99196394_+	3.14546682524419e-06	0.278795583943672	.	.	.	.
CESC	CAediting_201950	chr2_99196394_+	2.4727431054864e-14	0.440417517486723	.	.	.	.
LUAD	CAediting_201950	chr2_99196394_+	2.53914189762448e-16	0.367567816560403	.	.	.	.
COAD	CAediting_201950	chr2_99196394_+	1.37672773912376e-09	0.293131274218243	.	.	.	.
LUSC	CAediting_201950	chr2_99196394_+	1.76964829526353e-23	0.432474023931704	.	.	0.0258578522290234	0.101289467311551
GBM	CAediting_201950	chr2_99196394_+	0.00497116241347392	0.217698353150588	.	.	.	.
PRAD	CAediting_201950	chr2_99196394_+	0.00145357078801645	0.149655781905393	0.00892973865692544	0.12313276490704	.	.
HNSC	CAediting_201950	chr2_99196394_+	2.13084312547458e-14	0.351271355664094	0.00470266983313388	0.133623563271618	.	.
STAD	CAediting_201950	chr2_99196394_+	3.32075324285599e-13	0.373652212167485	.	.	.	.
THCA	CAediting_201950	chr2_99196394_+	1.27717341546421e-06	0.223324905892362	.	.	.	.
KIRC	CAediting_201950	chr2_99196394_+	1.13504532143586e-14	0.341669454791881	.	.	.	.
UCEC	CAediting_201950	chr2_99196394_+	2.18331781376025e-13	0.34062385915615	0.000207608961615343	0.176164004774686	.	.
KIRP	CAediting_201950	chr2_99196394_+	0.036637249962256	0.137589448960545	0.0004622373827152	0.228579521010219	.	.
ACC	CAediting_201950	chr2_99196394_+	1.67879666172455e-06	0.573405128046546	0.00279610014055647	0.379360269940162	.	.
ESCA	CAediting_201950	chr2_99196394_+	0.000355217780965254	0.277214651819084	0.0399602601293093	0.161579141293324	.	.
OV	CAediting_201950	chr2_99196394_+	2.1203516075621e-08	0.285344114056201	.	.	.	.
PAAD	CAediting_201950	chr2_99196394_+	0.00800803614289095	0.212960687382577	.	.	.	.
PCPG	CAediting_201950	chr2_99196394_+	0.000593231969351375	0.278149567155393	0.000414973898917012	0.285577577303193	.	.
SKCM	CAediting_201950	chr2_99196394_+	1.18483774341031e-21	0.441950835470517	0.0001097773061626	0.186956156503097	.	.
UVM	CAediting_201950	chr2_99196394_+	0.023924740830748	0.271699046176241	0.0491326940499876	0.237786665435838	.	.
MESO	CAediting_201950	chr2_99196394_+	.	.	0.000387040677698774	0.407081421438177	.	.
READ	CAediting_201950	chr2_99196394_+	0.029549042328978	0.180786796654716	.	.	.	.
SARC	CAediting_201950	chr2_99196394_+	9.50066759339182e-10	0.404457872983732	0.00627133456185972	0.187164954198576	.	.
TGCT	CAediting_201950	chr2_99196394_+	4.75526484637695e-24	0.726164468538261	.	.	.	.
THYM	CAediting_201950	chr2_99196394_+	0.0262593317644623	0.22801482527322	0.00201838944447867	0.312919195906919	0.020439616656727	0.237569228140766
BRCA	CAediting_201951	chr2_99196400_+	0.00641253402175226	0.366519560176023	.	.	.	.
BLCA	CAediting_201952	chr2_99196401_+	0.00422439380072262	0.292510236373531	.	.	.	.
LGG	CAediting_201952	chr2_99196401_+	0.0180736235372997	0.236027559895032	.	.	.	.
BRCA	CAediting_201952	chr2_99196401_+	1.74608767259872e-16	0.353153125327634	.	.	.	.
LIHC	CAediting_201952	chr2_99196401_+	0.000362031631450957	0.295190411009598	.	.	0.0329609566144465	0.179093754592114
CESC	CAediting_201952	chr2_99196401_+	0.0335275170335511	0.207666618713969	.	.	.	.
LUAD	CAediting_201952	chr2_99196401_+	8.42013701471777e-15	0.555103026038075	.	.	.	.
LUSC	CAediting_201952	chr2_99196401_+	0.00145231563776362	0.245929056733778	.	.	.	.
GBM	CAediting_201952	chr2_99196401_+	.	.	.	.	0.0115364054356971	0.251685695224119
HNSC	CAediting_201952	chr2_99196401_+	0.00345525653849904	0.245532838665087	.	.	.	.
STAD	CAediting_201952	chr2_99196401_+	5.7429417337595e-06	0.276580703973387	.	.	.	.
UCEC	CAediting_201952	chr2_99196401_+	0.0162125815769815	0.169822962121526	.	.	.	.
ESCA	CAediting_201952	chr2_99196401_+	0.000307569303097788	0.315148596884876	.	.	.	.
OV	CAediting_201952	chr2_99196401_+	0.0179310974378484	0.142916540953704	.	.	.	.
PCPG	CAediting_201952	chr2_99196401_+	.	.	0.0381361056117463	0.285649341926998	.	.
SARC	CAediting_201952	chr2_99196401_+	0.000255374325448387	0.42969620290578	.	.	.	.
TGCT	CAediting_201952	chr2_99196401_+	7.67553415598554e-07	0.544421143841972	.	.	.	.
BRCA	CAediting_201954	chr2_99196413_+	0.000127993127377011	0.327267860931684	.	.	.	.
GBM	CAediting_201954	chr2_99196413_+	0.00604137150045387	0.332092618363772	.	.	.	.
STAD	CAediting_201954	chr2_99196413_+	0.000467774304625903	0.275124175248664	0.0174097972837714	0.188971270992058	.	.
UCEC	CAediting_201954	chr2_99196413_+	.	.	3.94702208976801e-06	0.447005930662026	0.000103747576562469	0.382027019256223
ESCA	CAediting_201954	chr2_99196413_+	0.0244515846397804	0.245400804348447	.	.	.	.
OV	CAediting_201954	chr2_99196413_+	1.31471351544146e-05	0.28418151250918	.	.	.	.
BRCA	CAediting_201957	chr2_99196430_+	0.000178168220122701	0.339792748503995	.	.	.	.
STAD	CAediting_201957	chr2_99196430_+	.	.	0.0423080235539748	0.279978424051856	.	.
OV	CAediting_201957	chr2_99196430_+	0.0432665929271727	0.192219987957379	.	.	.	.
BLCA	CAediting_201958	chr2_99196434_+	8.98015376968121e-11	0.324601904718435	.	.	.	.
LGG	CAediting_201958	chr2_99196434_+	.	.	.	.	3.45819494199447e-05	0.180878480345062
BRCA	CAediting_201958	chr2_99196434_+	5.04226760547832e-29	0.333026799707467	.	.	.	.
LIHC	CAediting_201958	chr2_99196434_+	0.0315946804606687	0.130858593260375	.	.	.	.
CESC	CAediting_201958	chr2_99196434_+	2.10036171907478e-09	0.342518859271766	.	.	0.00102014638445524	0.191929120365164
LUAD	CAediting_201958	chr2_99196434_+	2.6529041105827e-06	0.212881052024445	.	.	.	.
COAD	CAediting_201958	chr2_99196434_+	5.18735322470901e-06	0.218001434746737	.	.	.	.
LUSC	CAediting_201958	chr2_99196434_+	1.6599243594383e-11	0.297706245937524	.	.	.	.
GBM	CAediting_201958	chr2_99196434_+	0.00234941641189711	0.23388679827777	.	.	.	.
PRAD	CAediting_201958	chr2_99196434_+	5.70921485000262e-06	0.205402835544908	.	.	.	.
HNSC	CAediting_201958	chr2_99196434_+	4.24500574273108e-10	0.278090212060088	.	.	.	.
STAD	CAediting_201958	chr2_99196434_+	0.000849490770654485	0.174360378813145	.	.	0.010581779036778	0.134022917686579
THCA	CAediting_201958	chr2_99196434_+	3.80919288413943e-05	0.187792463111078	.	.	.	.
KIRC	CAediting_201958	chr2_99196434_+	0.000620720476763791	0.154077381064627	.	.	.	.
UCEC	CAediting_201958	chr2_99196434_+	3.61415847900569e-13	0.324956343476209	.	.	.	.
KIRP	CAediting_201958	chr2_99196434_+	0.0179232424185496	0.146438131617236	.	.	.	.
ACC	CAediting_201958	chr2_99196434_+	0.0450406462887899	0.238650712603831	.	.	.	.
ESCA	CAediting_201958	chr2_99196434_+	0.000115583822911568	0.29828648982569	0.017996190235865	0.185685161336058	.	.
LAML	CAediting_201958	chr2_99196434_+	0.034125360546958	0.180503876424903	.	.	.	.
OV	CAediting_201958	chr2_99196434_+	2.4657895065133e-10	0.318094086583881	.	.	.	.
PCPG	CAediting_201958	chr2_99196434_+	0.0253019754104622	0.18323148129785	.	.	.	.
SKCM	CAediting_201958	chr2_99196434_+	4.44056512742132e-18	0.39430761101239	.	.	.	.
UCS	CAediting_201958	chr2_99196434_+	1.97860115188913e-07	0.639129787264491	.	.	.	.
UVM	CAediting_201958	chr2_99196434_+	.	.	.	.	0.0311157306427424	0.249151174460328
MESO	CAediting_201958	chr2_99196434_+	0.0098741366439317	0.286899377582819	.	.	.	.
READ	CAediting_201958	chr2_99196434_+	0.0496566197691324	0.15594560941237	.	.	.	.
SARC	CAediting_201958	chr2_99196434_+	4.70901872395698e-07	0.326255748884218	.	.	.	.
TGCT	CAediting_201958	chr2_99196434_+	7.63744978709255e-08	0.435346957986357	.	.	.	.
THYM	CAediting_201958	chr2_99196434_+	8.51013653550671e-06	0.423045250630034	0.0274850091723741	0.217271417024745	.	.
LGG	CAediting_201966	chr2_99196488_+	0.0254023120530216	0.28847048705203	.	.	.	.
BRCA	CAediting_201966	chr2_99196488_+	1.72034300127491e-12	0.386597124224676	.	.	.	.
LIHC	CAediting_201966	chr2_99196488_+	1.07112070777229e-05	0.368870036354761	.	.	.	.
LUAD	CAediting_201966	chr2_99196488_+	5.71175798897191e-05	0.406836594555569	.	.	.	.
LUSC	CAediting_201966	chr2_99196488_+	0.00125129456185971	0.439518754065643	.	.	.	.
THCA	CAediting_201966	chr2_99196488_+	0.0357068583810251	0.276395826620032	.	.	.	.
OV	CAediting_201966	chr2_99196488_+	0.00265954633716688	0.28254521900455	.	.	.	.
BLCA	CAediting_201971	chr2_99196515_+	3.20707197551749e-13	0.416554145498819	.	.	.	.
LGG	CAediting_201971	chr2_99196515_+	2.37043263754397e-11	0.310433092931607	1.85481046264519e-05	0.201900826462955	.	.
BRCA	CAediting_201971	chr2_99196515_+	1.79183192302622e-108	0.613076552174413	.	.	.	.
LIHC	CAediting_201971	chr2_99196515_+	2.2921857540709e-10	0.34743081876211	.	.	.	.
CESC	CAediting_201971	chr2_99196515_+	5.58780677874621e-11	0.394104582573492	.	.	.	.
LUAD	CAediting_201971	chr2_99196515_+	4.23119262059578e-23	0.440794402519299	.	.	.	.
COAD	CAediting_201971	chr2_99196515_+	2.55992955171313e-07	0.264029982680913	.	.	.	.
LUSC	CAediting_201971	chr2_99196515_+	2.43415627582717e-20	0.411833845517691	.	.	0.0109429461630485	0.118286146027977
GBM	CAediting_201971	chr2_99196515_+	3.21901757834787e-10	0.468544168182834	.	.	.	.
PRAD	CAediting_201971	chr2_99196515_+	2.08381405443162e-10	0.321361186731734	.	.	.	.
HNSC	CAediting_201971	chr2_99196515_+	1.77340240753786e-09	0.283387896780423	.	.	.	.
STAD	CAediting_201971	chr2_99196515_+	2.2001688705456e-15	0.402625897482723	.	.	.	.
THCA	CAediting_201971	chr2_99196515_+	2.03159715888048e-08	0.266979074598735	.	.	.	.
KIRC	CAediting_201971	chr2_99196515_+	3.80447164018669e-09	0.260650685930766	.	.	.	.
UCEC	CAediting_201971	chr2_99196515_+	1.95187962169019e-14	0.348825889717439	0.0211996809620737	0.108132099016603	.	.
KIRP	CAediting_201971	chr2_99196515_+	0.0158089190988656	0.182725624210657	.	.	.	.
ACC	CAediting_201971	chr2_99196515_+	0.00042425589343506	0.458977523772196	.	.	.	.
ESCA	CAediting_201971	chr2_99196515_+	1.30938689118985e-08	0.428251331784801	.	.	.	.
OV	CAediting_201971	chr2_99196515_+	1.64500386024238e-13	0.36903714883587	.	.	.	.
PAAD	CAediting_201971	chr2_99196515_+	7.29020236261889e-05	0.302893606947923	.	.	.	.
PCPG	CAediting_201971	chr2_99196515_+	1.723405716642e-05	0.337757652211129	0.00194864687019626	0.246966255034016	.	.
SKCM	CAediting_201971	chr2_99196515_+	7.74405868084039e-17	0.427910079041918	.	.	.	.
UVM	CAediting_201971	chr2_99196515_+	0.0167208809608915	0.307840951398368	.	.	.	.
MESO	CAediting_201971	chr2_99196515_+	0.007457310765597	0.308664442256189	.	.	.	.
SARC	CAediting_201971	chr2_99196515_+	2.21456910320528e-11	0.444384322865217	0.015151112686686	0.169027942861577	.	.
TGCT	CAediting_201971	chr2_99196515_+	6.86870996436635e-18	0.664357295558661	.	.	.	.
THYM	CAediting_201971	chr2_99196515_+	3.47061419185082e-08	0.526994772150791	.	.	.	.
BLCA	CAediting_201972	chr2_99196525_+	4.14919183692769e-09	0.345088436192877	0.00103750528009251	0.196759849350387	.	.
LGG	CAediting_201972	chr2_99196525_+	0.000310718630777937	0.17036994181383	1.73808883867668e-18	0.399973840176374	0.0150339288179723	0.115336555190496
BRCA	CAediting_201972	chr2_99196525_+	1.18607474003987e-62	0.494232852930271	.	.	.	.
LIHC	CAediting_201972	chr2_99196525_+	3.47341159551024e-05	0.238959321397348	.	.	.	.
CESC	CAediting_201972	chr2_99196525_+	1.1935715469425e-11	0.428629712432411	.	.	.	.
LUAD	CAediting_201972	chr2_99196525_+	5.03713465159189e-23	0.440970125163256	.	.	.	.
COAD	CAediting_201972	chr2_99196525_+	0.000814861747850544	0.191019518976371	.	.	.	.
LUSC	CAediting_201972	chr2_99196525_+	4.10712080496638e-17	0.39782115682657	.	.	0.033910751537463	0.10440508892563
GBM	CAediting_201972	chr2_99196525_+	3.06066580732885e-12	0.524061538852309	.	.	.	.
PRAD	CAediting_201972	chr2_99196525_+	0.000353572418996941	0.176451750849976	1.12719488188674e-05	0.216019868358931	.	.
HNSC	CAediting_201972	chr2_99196525_+	8.90561918943085e-13	0.358386834388728	0.00623465764864457	0.141196105572724	.	.
STAD	CAediting_201972	chr2_99196525_+	1.23783160519169e-12	0.369499517105927	6.28385506060035e-05	0.213431215347978	.	.
THCA	CAediting_201972	chr2_99196525_+	5.61902907044732e-11	0.313373075306972	.	.	.	.
KIRC	CAediting_201972	chr2_99196525_+	3.21861611434759e-07	0.229992647438858	.	.	.	.
UCEC	CAediting_201972	chr2_99196525_+	1.8332232864058e-10	0.312106759522189	.	.	.	.
ESCA	CAediting_201972	chr2_99196525_+	2.23056604089264e-06	0.366156207530344	0.0155728601329744	0.192156437319552	.	.
OV	CAediting_201972	chr2_99196525_+	2.49581840188155e-14	0.382869178818349	.	.	.	.
PCPG	CAediting_201972	chr2_99196525_+	0.00563779570618645	0.214613751522887	0.00139437756560438	0.246809589966386	.	.
SKCM	CAediting_201972	chr2_99196525_+	1.87458100860795e-09	0.313688833915544	0.000597037483243666	0.182349497934016	.	.
UVM	CAediting_201972	chr2_99196525_+	.	.	0.000694810227221475	0.455317539857973	.	.
MESO	CAediting_201972	chr2_99196525_+	.	.	0.00667805061687321	0.312694600716265	.	.
SARC	CAediting_201972	chr2_99196525_+	2.18351255100475e-08	0.378565800412458	1.05377502761589e-05	0.302333551713463	.	.
TGCT	CAediting_201972	chr2_99196525_+	6.23088052807185e-18	0.67082104796347	.	.	.	.
THYM	CAediting_201972	chr2_99196525_+	1.57976633137086e-05	0.447254896030074	0.0363291751412138	0.226094877618336	.	.
BLCA	CAediting_201976	chr2_99196540_+	0.0476879347924608	0.149484026582188	.	.	.	.
LGG	CAediting_201976	chr2_99196540_+	0.00349650054588257	0.317043707616479	.	.	.	.
BRCA	CAediting_201976	chr2_99196540_+	5.33919255564865e-10	0.22763349456017	.	.	.	.
LUAD	CAediting_201976	chr2_99196540_+	1.51843267815271e-06	0.280825252078936	.	.	.	.
LUSC	CAediting_201976	chr2_99196540_+	6.31687802255912e-05	0.22774522280783	.	.	.	.
GBM	CAediting_201976	chr2_99196540_+	3.30492768199323e-09	0.511240699616491	.	.	.	.
PRAD	CAediting_201976	chr2_99196540_+	0.00769088644356458	0.208077360777496	.	.	.	.
HNSC	CAediting_201976	chr2_99196540_+	0.0136512370811332	0.153085284806807	.	.	.	.
STAD	CAediting_201976	chr2_99196540_+	7.38717400797634e-13	0.379643118155873	.	.	.	.
UCEC	CAediting_201976	chr2_99196540_+	0.000279518692626013	0.196439214872174	.	.	.	.
ESCA	CAediting_201976	chr2_99196540_+	1.95697643935151e-05	0.331598269380308	.	.	.	.
OV	CAediting_201976	chr2_99196540_+	9.92053267201568e-10	0.312040352246413	.	.	.	.
SKCM	CAediting_201976	chr2_99196540_+	0.0365832998985479	0.169164878876895	.	.	.	.
COAD	CAediting_201978	chr2_99196552_+	0.00115530597055882	0.359067455851456	.	.	.	.
STAD	CAediting_201978	chr2_99196552_+	5.83517972351999e-08	0.326184007414335	.	.	.	.
UCEC	CAediting_201978	chr2_99196552_+	0.0374072819513178	0.174855630075914	.	.	.	.
ESCA	CAediting_201978	chr2_99196552_+	0.000851608114265915	0.28905946593809	.	.	.	.
OV	CAediting_201978	chr2_99196552_+	4.42861253248161e-06	0.253777493091861	.	.	.	.
BRCA	CAediting_201979	chr2_99196557_+	2.93237065004511e-05	0.194769712957602	.	.	.	.
CESC	CAediting_201979	chr2_99196557_+	0.0455972097911423	0.20672469405721	.	.	.	.
GBM	CAediting_201979	chr2_99196557_+	6.12740234136929e-07	0.420967372487543	.	.	.	.
HNSC	CAediting_201979	chr2_99196557_+	0.0366889441171031	0.181364134538724	0.030518203671196	0.187683168426101	.	.
STAD	CAediting_201979	chr2_99196557_+	7.03132132307386e-12	0.374299790898698	.	.	.	.
THCA	CAediting_201979	chr2_99196557_+	0.00208577675272295	0.26459817922574	.	.	.	.
UCEC	CAediting_201979	chr2_99196557_+	7.52178376005343e-07	0.287116028702869	0.000581228359105736	0.201856733723476	.	.
ESCA	CAediting_201979	chr2_99196557_+	8.80956947824299e-06	0.345385024759716	.	.	.	.
OV	CAediting_201979	chr2_99196557_+	7.26798684748662e-11	0.3306914673151	.	.	.	.
SKCM	CAediting_201979	chr2_99196557_+	0.0374718318294159	0.220931735129512	.	.	.	.
STAD	CAediting_201983	chr2_99196568_+	0.0243463115398371	0.253219202340405	.	.	.	.
OV	CAediting_201983	chr2_99196568_+	0.0261284026346405	0.174763494741813	.	.	.	.

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Relation with cancer stages for MRPL30

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ACC	pathologic_stage	CAediting_201948	chr2_99196380_+	0.014231042186743	-0.298246130116445
BRCA	pathologic_stage	CAediting_201924	chr2_99196001_+	0.0376839776349595	-0.0826914445279777
BRCA	pathologic_stage	CAediting_201938	chr2_99196324_+	0.000685087655168379	0.168869942931562
BRCA	pathologic_stage	CAediting_201971	chr2_99196515_+	0.0170281879509885	0.0747354690177206
BRCA	pathologic_stage	CAediting_201972	chr2_99196525_+	0.0238653135316051	0.0722052215039557
COAD	pathologic_stage	CAediting_201918	chr2_99195966_+	0.0226284164078067	-0.217235220040788
COAD	pathologic_stage	CAediting_201979	chr2_99196557_+	0.0491726639218531	0.157269388559947
ESCA	clinical_stage	CAediting_201972	chr2_99196525_+	0.0278841469701478	-0.302150371542244
ESCA	pathologic_stage	CAediting_201958	chr2_99196434_+	0.0465440916104782	0.166744015946297
HNSC	clinical_stage	CAediting_201958	chr2_99196434_+	0.00408504666481338	0.131804844926445
HNSC	pathologic_stage	CAediting_201958	chr2_99196434_+	0.0483128818852919	0.0959572345399232
KIRC	pathologic_stage	CAediting_201924	chr2_99196001_+	0.0112941477410764	0.140375634166575
KIRC	pathologic_stage	CAediting_201938	chr2_99196324_+	0.0246318393729058	0.142971252085072
KIRC	pathologic_stage	CAediting_201941	chr2_99196345_+	0.0388724569080278	0.152837730052974
KIRC	pathologic_stage	CAediting_201942	chr2_99196354_+	0.00911079170184771	0.149347025618911
KIRC	pathologic_stage	CAediting_201950	chr2_99196394_+	0.0348313619113863	0.0962489489757382
KIRC	pathologic_stage	CAediting_201952	chr2_99196401_+	0.0112924492252011	0.163973703697997
KIRC	pathologic_stage	CAediting_201958	chr2_99196434_+	0.0285607005570815	0.0991238923840888
KIRC	pathologic_stage	CAediting_201971	chr2_99196515_+	0.00667214049942401	0.121907038727786
KIRC	pathologic_stage	CAediting_201976	chr2_99196540_+	0.00361617949869286	0.147203770942557
KIRC	pathologic_stage	CAediting_201979	chr2_99196557_+	0.0140475696647724	0.155480153068534
KIRP	clinical_stage	CAediting_201971	chr2_99196515_+	0.0128044776292374	0.231482512699192
KIRP	pathologic_stage	CAediting_201958	chr2_99196434_+	0.034254070448279	0.137591095432183
KIRP	pathologic_stage	CAediting_201971	chr2_99196515_+	0.00167653854443795	0.249594797565076
LIHC	pathologic_stage	CAediting_201958	chr2_99196434_+	0.0418638138497534	-0.128805499340912
LUSC	pathologic_stage	CAediting_201924	chr2_99196001_+	0.0287734918160769	-0.150923549484308
LUSC	pathologic_stage	CAediting_201942	chr2_99196354_+	0.0410316118363953	-0.127552697825646
LUSC	pathologic_stage	CAediting_201979	chr2_99196557_+	0.0284139831402576	0.170138653860802
MESO	pathologic_stage	CAediting_201948	chr2_99196380_+	0.0217493507025129	0.253152590562018
READ	pathologic_stage	CAediting_201941	chr2_99196345_+	0.0226009045799544	-0.296480608859314
TGCT	pathologic_stage	CAediting_201950	chr2_99196394_+	0.0403951812159673	-0.243895294272457
TGCT	pathologic_stage	CAediting_201958	chr2_99196434_+	0.0472394131065464	-0.236322774094126
THCA	pathologic_stage	CAediting_201925	chr2_99196002_+	0.022729222710008	0.155316745374831
THCA	pathologic_stage	CAediting_201950	chr2_99196394_+	0.0271915894752689	0.103554422952164
THCA	pathologic_stage	CAediting_201958	chr2_99196434_+	0.0073032793747849	0.12372894223012
THCA	pathologic_stage	CAediting_201971	chr2_99196515_+	8.23386277744131e-05	0.19003705709906
THCA	pathologic_stage	CAediting_201972	chr2_99196525_+	0.020576581396885	0.113782905406078
UCEC	clinical_stage	CAediting_201911	chr2_99195935_+	0.0239099591055851	0.221391208476812
UVM	clinical_stage	CAediting_201971	chr2_99196515_+	0.0320352132540138	0.277168161681537

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Relation with survival for MRPL30

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_201918	chr2_99195966_+	0.0162000633116041	0.0362157	5.89475e-05
LIHC	CAediting_201914	chr2_99195951_+	0.025995428519783	0.0335524	0.0108929
LIHC	CAediting_201941	chr2_99196345_+	0.0248393248463371	0.0134522	0.00180203
CESC	CAediting_201921	chr2_99195987_+	0.00953053125294756	0.027212	2517030000
CESC	CAediting_201924	chr2_99196001_+	0.0104215824742544	0.0104453	1.76395e-11
GBM	CAediting_201976	chr2_99196540_+	0.0320534508355198	0.0166472	0.0198845
HNSC	CAediting_201952	chr2_99196401_+	0.0051431331665327	0.00355337	2779.18
ESCA	CAediting_201925	chr2_99196002_+	0.0126015011115927	0.0491644	40.0965
ESCA	CAediting_201976	chr2_99196540_+	0.0261045680810149	0.0109354	13.7942

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RelatedDrugs for MRPL30

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for MRPL30

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene