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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: DCTN4 (CAeditome ID:51164)

Gene summary for DCTN4

check button Gene summary
Gene informationGene symbol

DCTN4

Gene ID

51164

Gene namedynactin subunit 4
SynonymsDYN4|P62
Cytomap

5q33.1

Type of geneprotein-coding
Descriptiondynactin subunit 4dynactin 4 (p62)dynactin p62 subunitdynactin subunit p62
Modification date20210518
UniProtAcc

Q9UJW0

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
DCTN4

GO:0005813

Dynactin subunit 4

21399614


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RNA A-to-I events for DCTN4

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000132912.11

check button RNA A-to-I editing events in Cancer.
CAediting_441441(150712294, -), CAediting_441442(150713496, -), CAediting_441443(150713498, -), CAediting_441444(150713515, -), CAediting_441445(150713540, -), CAediting_441446(150713546, -), CAediting_441447(150713581, -), CAediting_441448(150713582, -), CAediting_441449(150713612, -), CAediting_441450(150713614, -), CAediting_441451(150713617, -), CAediting_441452(150713626, -), CAediting_441453(150713676, -), CAediting_441454(150713891, -), CAediting_441455(150713900, -), CAediting_441456(150713925, -), CAediting_441457(150713951, -), CAediting_441458(150713989, -), CAediting_441459(150713995, -), CAediting_441460(150714031, -), CAediting_441461(150714034, -), CAediting_441462(150714035, -), CAediting_441463(150714040, -), CAediting_441464(150714114, -), CAediting_441465(150714528, -), CAediting_441466(150714531, -), CAediting_441467(150714543, -), CAediting_441468(150714586, -), CAediting_441469(150715933, -), CAediting_441470(150715990, -), CAediting_441471(150715994, -), CAediting_441472(150716002, -), CAediting_441473(150716049, -), CAediting_441474(150716065, -), CAediting_441475(150716123, -), CAediting_441476(150716124, -), CAediting_441477(150716149, -), CAediting_441478(150716170, -), CAediting_441479(150716185, -), CAediting_441480(150716668, -), CAediting_441481(150716675, -), CAediting_441482(150716715, -), CAediting_441483(150716843, -), CAediting_441484(150716909, -), CAediting_441485(150723606, -), CAediting_441486(150725995, -), CAediting_441487(150726014, -), CAediting_441488(150726519, -), CAediting_441489(150727098, -), CAediting_441490(150727130, -), CAediting_441491(150727131, -), CAediting_441492(150727135, -), CAediting_441493(150727136, -), CAediting_441494(150727138, -), CAediting_441495(150728908, -), CAediting_441496(150728935, -), CAediting_441497(150728938, -), CAediting_441498(150728940, -), CAediting_441499(150728943, -), CAediting_441500(150728966, -), CAediting_441501(150728970, -), CAediting_441502(150728975, -), CAediting_441503(150728989, -), CAediting_441504(150728993, -), CAediting_441505(150729002, -), CAediting_441506(150729016, -), CAediting_441507(150729039, -), CAediting_441508(150729094, -), CAediting_441509(150729103, -), CAediting_441510(150729113, -), CAediting_441511(150729137, -), CAediting_441512(150729141, -), CAediting_441513(150729145, -), CAediting_441514(150729146, -), CAediting_441515(150729161, -), CAediting_441516(150729167, -), CAediting_441517(150729168, -), CAediting_441518(150729719, -), CAediting_441519(150729760, -), CAediting_441520(150733961, -), CAediting_441521(150733965, -), CAediting_441522(150734011, -), CAediting_441523(150734018, -), CAediting_441524(150734027, -), CAediting_441525(150734062, -), CAediting_441526(150734068, -), CAediting_441527(150734070, -), CAediting_441528(150734080, -), CAediting_441529(150741089, -), CAediting_441530(150741097, -), CAediting_441531(150741103, -), CAediting_441532(150741113, -), CAediting_441533(150741163, -), CAediting_441534(150741510, -), CAediting_441535(150741523, -), CAediting_441536(150741541, -), CAediting_441537(150741573, -), CAediting_441538(150741578, -), CAediting_441539(150741649, -), CAediting_441540(150741650, -), CAediting_441541(150741714, -), CAediting_441542(150754708, -), CAediting_441543(150754868, -), CAediting_441544(150756072, -), CAediting_441545(150756107, -), CAediting_441546(150756109, -), CAediting_441547(150756127, -), CAediting_441548(150756138, -), CAediting_441549(150756180, -), CAediting_441550(150756206, -), CAediting_441551(150756210, -), CAediting_441552(150756211, -), CAediting_441553(150756212, -), CAediting_441554(150756213, -), CAediting_441555(150756216, -), CAediting_441556(150756218, -), CAediting_441557(150756269, -), CAediting_441558(150756311, -), CAediting_441559(150756312, -), CAediting_441560(150756320, -), CAediting_441561(150756334, -),

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RNA editing positional annotations for DCTN4 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_441441chr5_150712294_-intronic
CAediting_441442chr5_150713496_-intronic
CAediting_441443chr5_150713498_-intronic
CAediting_441444chr5_150713515_-intronic
CAediting_441445chr5_150713540_-intronic
CAediting_441446chr5_150713546_-intronic
CAediting_441447chr5_150713581_-intronic
CAediting_441448chr5_150713582_-intronic
CAediting_441449chr5_150713612_-intronic
CAediting_441450chr5_150713614_-intronic
CAediting_441451chr5_150713617_-intronic
CAediting_441452chr5_150713626_-intronic
CAediting_441453chr5_150713676_-intronic
CAediting_441454chr5_150713891_-intronic
CAediting_441455chr5_150713900_-intronic
CAediting_441456chr5_150713925_-intronic
CAediting_441457chr5_150713951_-intronic
CAediting_441458chr5_150713989_-intronic
CAediting_441459chr5_150713995_-intronic
CAediting_441460chr5_150714031_-intronic
CAediting_441461chr5_150714034_-intronic
CAediting_441462chr5_150714035_-intronic
CAediting_441463chr5_150714040_-intronic
CAediting_441464chr5_150714114_-intronic
CAediting_441465chr5_150714528_-intronic
CAediting_441466chr5_150714531_-intronic
CAediting_441467chr5_150714543_-intronic
CAediting_441468chr5_150714586_-intronic
CAediting_441469chr5_150715933_-intronic
CAediting_441470chr5_150715990_-intronic
CAediting_441471chr5_150715994_-intronic
CAediting_441472chr5_150716002_-intronic
CAediting_441473chr5_150716049_-intronic
CAediting_441474chr5_150716065_-intronic
CAediting_441475chr5_150716123_-intronic
CAediting_441476chr5_150716124_-intronic
CAediting_441477chr5_150716149_-intronic
CAediting_441478chr5_150716170_-intronic
CAediting_441479chr5_150716185_-intronic
CAediting_441480chr5_150716668_-intronic
CAediting_441481chr5_150716675_-intronic
CAediting_441482chr5_150716715_-intronic
CAediting_441483chr5_150716843_-intronic
CAediting_441484chr5_150716909_-intronic
CAediting_441485chr5_150723606_-ncRNA_intronic
CAediting_441486chr5_150725995_-ncRNA_intronic
CAediting_441487chr5_150726014_-ncRNA_intronic
CAediting_441488chr5_150726519_-ncRNA_intronic
CAediting_441489chr5_150727098_-ncRNA_intronic
CAediting_441490chr5_150727130_-ncRNA_intronic
CAediting_441491chr5_150727131_-ncRNA_intronic
CAediting_441492chr5_150727135_-ncRNA_intronic
CAediting_441493chr5_150727136_-ncRNA_intronic
CAediting_441494chr5_150727138_-ncRNA_intronic
CAediting_441495chr5_150728908_-ncRNA_intronic
CAediting_441496chr5_150728935_-ncRNA_intronic
CAediting_441497chr5_150728938_-ncRNA_intronic
CAediting_441498chr5_150728940_-ncRNA_intronic
CAediting_441499chr5_150728943_-ncRNA_intronic
CAediting_441500chr5_150728966_-ncRNA_intronic
CAediting_441501chr5_150728970_-ncRNA_intronic
CAediting_441502chr5_150728975_-ncRNA_intronic
CAediting_441503chr5_150728989_-ncRNA_intronic
CAediting_441504chr5_150728993_-ncRNA_intronic
CAediting_441505chr5_150729002_-ncRNA_intronic
CAediting_441506chr5_150729016_-ncRNA_intronic
CAediting_441507chr5_150729039_-ncRNA_intronic
CAediting_441508chr5_150729094_-ncRNA_intronic
CAediting_441509chr5_150729103_-ncRNA_intronic
CAediting_441510chr5_150729113_-ncRNA_intronic
CAediting_441511chr5_150729137_-ncRNA_intronic
CAediting_441512chr5_150729141_-ncRNA_intronic
CAediting_441513chr5_150729145_-ncRNA_intronic
CAediting_441514chr5_150729146_-ncRNA_intronic
CAediting_441515chr5_150729161_-ncRNA_intronic
CAediting_441516chr5_150729167_-ncRNA_intronic
CAediting_441517chr5_150729168_-ncRNA_intronic
CAediting_441518chr5_150729719_-ncRNA_intronic
CAediting_441519chr5_150729760_-ncRNA_intronic
CAediting_441520chr5_150733961_-ncRNA_intronic
CAediting_441521chr5_150733965_-ncRNA_intronic
CAediting_441522chr5_150734011_-ncRNA_intronic
CAediting_441523chr5_150734018_-ncRNA_intronic
CAediting_441524chr5_150734027_-ncRNA_intronic
CAediting_441525chr5_150734062_-ncRNA_intronic
CAediting_441526chr5_150734068_-ncRNA_intronic
CAediting_441527chr5_150734070_-ncRNA_intronic
CAediting_441528chr5_150734080_-ncRNA_intronic
CAediting_441529chr5_150741089_-ncRNA_intronic
CAediting_441530chr5_150741097_-ncRNA_intronic
CAediting_441531chr5_150741103_-ncRNA_intronic
CAediting_441532chr5_150741113_-ncRNA_intronic
CAediting_441533chr5_150741163_-ncRNA_intronic
CAediting_441534chr5_150741510_-ncRNA_intronic
CAediting_441535chr5_150741523_-ncRNA_intronic
CAediting_441536chr5_150741541_-ncRNA_intronic
CAediting_441537chr5_150741573_-ncRNA_intronic
CAediting_441538chr5_150741578_-ncRNA_intronic
CAediting_441539chr5_150741649_-ncRNA_intronic
CAediting_441540chr5_150741650_-ncRNA_intronic
CAediting_441541chr5_150741714_-ncRNA_intronic
CAediting_441542chr5_150754708_-ncRNA_intronic
CAediting_441543chr5_150754868_-ncRNA_intronic
CAediting_441544chr5_150756072_-ncRNA_intronic
CAediting_441545chr5_150756107_-ncRNA_intronic
CAediting_441546chr5_150756109_-ncRNA_intronic
CAediting_441547chr5_150756127_-ncRNA_intronic
CAediting_441548chr5_150756138_-ncRNA_intronic
CAediting_441549chr5_150756180_-ncRNA_intronic
CAediting_441550chr5_150756206_-ncRNA_intronic
CAediting_441551chr5_150756210_-ncRNA_intronic
CAediting_441552chr5_150756211_-ncRNA_intronic
CAediting_441553chr5_150756212_-ncRNA_intronic
CAediting_441554chr5_150756213_-ncRNA_intronic
CAediting_441555chr5_150756216_-ncRNA_intronic
CAediting_441556chr5_150756218_-ncRNA_intronic
CAediting_441557chr5_150756269_-ncRNA_intronic
CAediting_441558chr5_150756311_-ncRNA_intronic
CAediting_441559chr5_150756312_-ncRNA_intronic
CAediting_441560chr5_150756320_-ncRNA_intronic
CAediting_441561chr5_150756334_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_441441chr5_150712294_-SINEAluAluSx
CAediting_441442chr5_150713496_-SINEAluAluSz
CAediting_441443chr5_150713498_-SINEAluAluSz
CAediting_441444chr5_150713515_-SINEAluAluSz
CAediting_441445chr5_150713540_-SINEAluAluSz
CAediting_441446chr5_150713546_-SINEAluAluSz
CAediting_441447chr5_150713581_-SINEAluAluSz
CAediting_441448chr5_150713582_-SINEAluAluSz
CAediting_441449chr5_150713612_-SINEAluAluSz
CAediting_441450chr5_150713614_-SINEAluAluSz
CAediting_441451chr5_150713617_-SINEAluAluSz
CAediting_441452chr5_150713626_-SINEAluAluSz
CAediting_441453chr5_150713676_-SINEAluAluSz
CAediting_441454chr5_150713891_-SINEAluAluSz
CAediting_441455chr5_150713900_-SINEAluAluSz
CAediting_441456chr5_150713925_-SINEAluAluSz
CAediting_441457chr5_150713951_-SINEAluAluSz
CAediting_441458chr5_150713989_-SINEAluAluSz
CAediting_441459chr5_150713995_-SINEAluAluSz
CAediting_441460chr5_150714031_-SINEAluAluSz
CAediting_441461chr5_150714034_-SINEAluAluSz
CAediting_441462chr5_150714035_-SINEAluAluSz
CAediting_441463chr5_150714040_-SINEAluAluSz
CAediting_441464chr5_150714114_-SINEAluAluSz
CAediting_441465chr5_150714528_-SINEAluAluJr
CAediting_441466chr5_150714531_-SINEAluAluJr
CAediting_441467chr5_150714543_-SINEAluAluJr
CAediting_441468chr5_150714586_-SINEAluAluJr
CAediting_441469chr5_150715933_-SINEAluAluSx3
CAediting_441470chr5_150715990_-SINEAluAluSx3
CAediting_441471chr5_150715994_-SINEAluAluSx3
CAediting_441472chr5_150716002_-SINEAluAluSx3
CAediting_441473chr5_150716049_-SINEAluAluSx3
CAediting_441474chr5_150716065_-SINEAluAluSx3
CAediting_441475chr5_150716123_-SINEAluAluSx3
CAediting_441476chr5_150716124_-SINEAluAluSx3
CAediting_441477chr5_150716149_-SINEAluAluSx3
CAediting_441478chr5_150716170_-SINEAluAluSx3
CAediting_441479chr5_150716185_-SINEAluAluSx3
CAediting_441480chr5_150716668_-SINEAluAluSc
CAediting_441481chr5_150716675_-SINEAluAluSc
CAediting_441482chr5_150716715_-SINEAluAluSc
CAediting_441483chr5_150716843_-SINEAluAluSc
CAediting_441484chr5_150716909_-SINEAluAluSc
CAediting_441485chr5_150723606_-SINEAluAluJo
CAediting_441486chr5_150725995_-SINEAluAluSq2
CAediting_441487chr5_150726014_-SINEAluAluSq2
CAediting_441495chr5_150728908_-SINEAluAluJb
CAediting_441496chr5_150728935_-SINEAluAluJb
CAediting_441497chr5_150728938_-SINEAluAluJb
CAediting_441498chr5_150728940_-SINEAluAluJb
CAediting_441499chr5_150728943_-SINEAluAluJb
CAediting_441500chr5_150728966_-SINEAluAluJb
CAediting_441501chr5_150728970_-SINEAluAluJb
CAediting_441502chr5_150728975_-SINEAluAluJb
CAediting_441503chr5_150728989_-SINEAluAluJb
CAediting_441504chr5_150728993_-SINEAluAluJb
CAediting_441505chr5_150729002_-SINEAluAluJb
CAediting_441506chr5_150729016_-SINEAluAluJb
CAediting_441507chr5_150729039_-SINEAluAluJb
CAediting_441508chr5_150729094_-SINEAluAluJb
CAediting_441509chr5_150729103_-SINEAluAluJb
CAediting_441510chr5_150729113_-SINEAluAluJb
CAediting_441511chr5_150729137_-SINEAluAluJb
CAediting_441512chr5_150729141_-SINEAluAluJb
CAediting_441513chr5_150729145_-SINEAluAluJb
CAediting_441514chr5_150729146_-SINEAluAluJb
CAediting_441515chr5_150729161_-SINEAluAluJb
CAediting_441516chr5_150729167_-SINEAluAluJb
CAediting_441517chr5_150729168_-SINEAluAluJb
CAediting_441518chr5_150729719_-SINEAluFAM
CAediting_441519chr5_150729760_-SINEAluFAM
CAediting_441520chr5_150733961_-SINEAluAluJr
CAediting_441521chr5_150733965_-SINEAluAluJr
CAediting_441522chr5_150734011_-SINEAluAluJr
CAediting_441523chr5_150734018_-SINEAluAluJr
CAediting_441524chr5_150734027_-SINEAluAluJr
CAediting_441525chr5_150734062_-SINEAluAluJr
CAediting_441526chr5_150734068_-SINEAluAluJr
CAediting_441527chr5_150734070_-SINEAluAluJr
CAediting_441528chr5_150734080_-SINEAluAluJr
CAediting_441529chr5_150741089_-SINEAluAluJb
CAediting_441530chr5_150741097_-SINEAluAluJb
CAediting_441531chr5_150741103_-SINEAluAluJb
CAediting_441532chr5_150741113_-SINEAluAluJb
CAediting_441533chr5_150741163_-SINEAluAluJb
CAediting_441534chr5_150741510_-SINEAluAluJr
CAediting_441535chr5_150741523_-SINEAluAluJr
CAediting_441536chr5_150741541_-SINEAluAluJr
CAediting_441537chr5_150741573_-SINEAluAluJr
CAediting_441538chr5_150741578_-SINEAluAluJr
CAediting_441539chr5_150741649_-SINEAluAluJr
CAediting_441540chr5_150741650_-SINEAluAluJr
CAediting_441541chr5_150741714_-SINEAluAluJr
CAediting_441542chr5_150754708_-SINEAluAluJb
CAediting_441543chr5_150754868_-SINEAluAluJb
CAediting_441544chr5_150756072_-SINEAluAluSc8
CAediting_441545chr5_150756107_-SINEAluAluSc8
CAediting_441546chr5_150756109_-SINEAluAluSc8
CAediting_441547chr5_150756127_-SINEAluAluSc8
CAediting_441548chr5_150756138_-SINEAluAluSc8
CAediting_441549chr5_150756180_-SINEAluAluSc8
CAediting_441550chr5_150756206_-SINEAluAluSc8
CAediting_441551chr5_150756210_-SINEAluAluSc8
CAediting_441552chr5_150756211_-SINEAluAluSc8
CAediting_441553chr5_150756212_-SINEAluAluSc8
CAediting_441554chr5_150756213_-SINEAluAluSc8
CAediting_441555chr5_150756216_-SINEAluAluSc8
CAediting_441556chr5_150756218_-SINEAluAluSc8
CAediting_441557chr5_150756269_-SINEAluAluSc8
CAediting_441558chr5_150756311_-SINEAluAluSc8
CAediting_441559chr5_150756312_-SINEAluAluSc8
CAediting_441560chr5_150756320_-SINEAluAluSc8
CAediting_441561chr5_150756334_-SINEAluAluSc8

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RNA A-to-I editing events in the alternative splicing sites for DCTN4

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_441458chr5_150713989_-150713985:1507139935SS0+2iAGGCAAGCG-15.19AGGCGAGCG-14.66
ESCAediting_441464chr5_150714114_-150714110:1507141323SS0+2iAGTCTTTGTTTTGTTTTTAGAGA7.41AGTCTTTGTTTTGTTTTTGGAGA-0.55

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000132912.11.DCTN4.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000132912.11.DCTN4.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for DCTN4

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
LAML.CAediting_441492.ENSG00000132912.DCTN4.png
Soverview

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Protein coding region RNA A-to-I editings for DCTN4

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for DCTN4

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000132912.11ENST00000447998hsa-miR-605-3p1507105291507105357mer-m8150710528150710548160-21.86
CAediting_393chr1_1167164_+ENSG00000132912.11ENST00000447998hsa-miR-200b-3p1507107261507107327mer-m8150710725150710747145-11.17
CAediting_393chr1_1167164_+ENSG00000132912.11ENST00000447998hsa-miR-200b-3p1507101741507101796mer150710173150710194144-11.39
CAediting_688080chr9_63819626_+ENSG00000132912.11ENST00000447998hsa-miR-4477b1507091651507091717mer-m8150709164150709185148-11.49
CAediting_748296chr10_51299626_+ENSG00000132912.11ENST00000424236hsa-miR-605-3p1507105291507105357mer-m8150710528150710548160-21.86
CAediting_393chr1_1167164_+ENSG00000132912.11ENST00000424236hsa-miR-200b-3p1507107261507107327mer-m8150710725150710747145-11.17
CAediting_393chr1_1167164_+ENSG00000132912.11ENST00000424236hsa-miR-200b-3p1507101741507101796mer150710173150710194144-11.39
CAediting_688080chr9_63819626_+ENSG00000132912.11ENST00000424236hsa-miR-4477b1507091651507091717mer-m8150709164150709185148-11.49
CAediting_1229414chr17_67471546_+ENSG00000132912.11ENST00000447998hsa-miR-548aa1507098131507098197mer-m8150709812150709836140-8.18
CAediting_1351755chr19_40282625_-ENSG00000132912.11ENST00000447998hsa-miR-6411507109281507109336mer150710927150710954140-18
CAediting_228905chr2_188297554_+ENSG00000132912.11ENST00000447998hsa-miR-561-3p1507108241507108307mer-m8150710823150710844140-12.35
CAediting_396018chr5_1062918_-ENSG00000132912.11ENST00000447998hsa-miR-46351507091631507091708mer-1a150709163150709187144-19.41
CAediting_414656chr5_72878640_+ENSG00000132912.11ENST00000447998hsa-miR-4804-3p1507096451507096517mer-m8150709644150709664155-17.7
CAediting_1229414chr17_67471546_+ENSG00000132912.11ENST00000424236hsa-miR-548aa1507098131507098197mer-m8150709812150709836140-8.18
CAediting_1351755chr19_40282625_-ENSG00000132912.11ENST00000424236hsa-miR-6411507109281507109336mer150710927150710954140-18
CAediting_228905chr2_188297554_+ENSG00000132912.11ENST00000424236hsa-miR-561-3p1507108241507108307mer-m8150710823150710844140-12.35
CAediting_396018chr5_1062918_-ENSG00000132912.11ENST00000424236hsa-miR-46351507091631507091708mer-1a150709163150709187144-19.41
CAediting_414656chr5_72878640_+ENSG00000132912.11ENST00000424236hsa-miR-4804-3p1507096451507096517mer-m8150709644150709664155-17.7
CAediting_1351755chr19_40282625_-ENSG00000132912.11ENST00000446090hsa-miR-6411507109281507109336mer150710927150710954140-18
CAediting_1229415chr17_67471547_+ENSG00000132912.11ENST00000627368hsa-miR-548aa1507333721507333787mer-m8150733371150733400150-10.93
CAediting_573000chr7_92204081_-ENSG00000132912.11ENST00000627368hsa-miR-1285-5p1507334161507334227mer-m8150733415150733435146-19.55
CAediting_1368054chr19_46709310_-ENSG00000132912.11ENST00000627368hsa-miR-320e1507311091507311168mer-1a150731109150731126149-13.01
CAediting_396018chr5_1062918_-ENSG00000132912.11ENST00000627368hsa-miR-46351507155831507155908mer-1a150715583150715606148-16.72
CAediting_1351755chr19_40282625_-ENSG00000132912.11ENST00000627368hsa-miR-6411507109281507109336mer150710927150710954140-18
CAediting_573000chr7_92204081_-ENSG00000132912.11ENST00000521448hsa-miR-1285-5p1507334161507334227mer-m8150733415150733435146-19.55
CAediting_1524209chrX_134546392_-ENSG00000132912.11ENST00000627368hsa-miR-503-5p1507306331507306397mer-m8150730632150730655157-21.61

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000132912.11ENST00000447998hsa-miR-200b-3p1507091391507091446mer150709138150709159143-6.55
CAediting_688080chr9_63819626_+ENSG00000132912.11ENST00000447998hsa-miR-4477b1507086241507086318mer-1a150708624150708644141-8
CAediting_524911chr7_5495852_-ENSG00000132912.11ENST00000447998hsa-miR-589-3p1507103091507103157mer-m8150710308150710331140-10.71
CAediting_524911chr7_5495852_-ENSG00000132912.11ENST00000447998hsa-miR-589-3p1507102821507102887mer-m8150710281150710307148-12.83
CAediting_393chr1_1167164_+ENSG00000132912.11ENST00000424236hsa-miR-200b-3p1507091391507091446mer150709138150709159143-6.55
CAediting_524911chr7_5495852_-ENSG00000132912.11ENST00000424236hsa-miR-589-3p1507103091507103157mer-m8150710308150710331140-10.71
CAediting_524911chr7_5495852_-ENSG00000132912.11ENST00000424236hsa-miR-589-3p1507102821507102887mer-m8150710281150710307148-12.83

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for DCTN4

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for DCTN4

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for DCTN4

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for DCTN4

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for DCTN4

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for DCTN4

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
DCTN4C0010674Cystic Fibrosis1CTD_human;ORPHANET
DCTN4C0033817Pseudomonas Infections1CTD_human
DCTN4C0392164Pulmonary Cystic Fibrosis1CTD_human
DCTN4C0854135Pseudomonas aeruginosa infection1CTD_human
DCTN4C1527396Fibrocystic Disease of Pancreas1CTD_human