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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: ZNF580 (CAeditome ID:51157) |
Gene summary for ZNF580 |
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Gene information | Gene symbol | ZNF580 | Gene ID | 51157 |
Gene name | zinc finger protein 580 | |
Synonyms | - | |
Cytomap | 19q13.42 | |
Type of gene | protein-coding | |
Description | zinc finger protein 580LDL-induced EC protein | |
Modification date | 20210518 | |
UniProtAcc | Q9UK33 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
ZNF580 | GO:1990837 | Zinc finger protein 580 | 28473536 |
ZNF580 | GO:0001938 | Zinc finger protein 580 | 20382120 |
ZNF580 | GO:0002690 | Zinc finger protein 580 | 21830064 |
ZNF580 | GO:0010595 | Zinc finger protein 580 | 20382120 |
ZNF580 | GO:0010628 | Zinc finger protein 580 | 20382120 |
ZNF580 | GO:0010628 | Zinc finger protein 580 | 21830064 |
ZNF580 | GO:0032757 | Zinc finger protein 580 | 21830064 |
ZNF580 | GO:0070301 | Zinc finger protein 580 | 21830064 |
ZNF580 | GO:0005634 | Zinc finger protein 580 | 20382120 |
ZNF580 | GO:0005634 | Zinc finger protein 580 | 21599657 |
ZNF580 | GO:0005654 | Zinc finger protein 580 | 0000052 |
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RNA A-to-I events for ZNF580 |
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CAediting_1391508(55637024, +), CAediting_1391509(55637041, +), CAediting_1391510(55637068, +), CAediting_1391511(55637096, +), CAediting_1391512(55637146, +), CAediting_1391513(55637258, +), CAediting_1391514(55637278, +), CAediting_1391515(55637280, +), CAediting_1391516(55637281, +), CAediting_1391517(55637303, +), CAediting_1391518(55637307, +), CAediting_1391519(55637313, +), CAediting_1391520(55637337, +), CAediting_1391521(55637350, +), CAediting_1391522(55637352, +), CAediting_1391523(55637359, +), CAediting_1391524(55637380, +), CAediting_1391525(55637390, +), CAediting_1391526(55637398, +), CAediting_1391527(55637416, +), CAediting_1391528(55637417, +), CAediting_1391529(55637422, +), CAediting_1391530(55637457, +), CAediting_1391531(55637458, +), CAediting_1391532(55637482, +), CAediting_1391533(55637507, +), CAediting_1391534(55638261, +), CAediting_1391535(55638282, +), CAediting_1391536(55638294, +), CAediting_1391537(55638300, +), CAediting_1391538(55638302, +), CAediting_1391539(55638303, +), CAediting_1391540(55638318, +), CAediting_1391541(55638319, +), CAediting_1391542(55638338, +), CAediting_1391543(55638356, +), CAediting_1391544(55638364, +), CAediting_1391545(55638365, +), CAediting_1391546(55638368, +), CAediting_1391547(55638378, +), CAediting_1391548(55638380, +), CAediting_1391549(55638400, +), CAediting_1391550(55638404, +), CAediting_1391551(55638419, +), CAediting_1391552(55638429, +), CAediting_1391553(55638434, +), CAediting_1391554(55638436, +), CAediting_1391555(55638473, +), CAediting_1391556(55638474, +), CAediting_1391557(55638495, +), CAediting_1391558(55638497, +), CAediting_1391559(55638509, +), CAediting_1391560(55638511, +), CAediting_1391561(55638711, +), CAediting_1391562(55638725, +), CAediting_1391563(55638733, +), CAediting_1391564(55638734, +), CAediting_1391565(55638739, +), CAediting_1391566(55638750, +), CAediting_1391567(55638756, +), CAediting_1391568(55638760, +), CAediting_1391569(55638769, +), CAediting_1391570(55638774, +), CAediting_1391571(55638779, +), CAediting_1391572(55638782, +), CAediting_1391573(55638790, +), CAediting_1391574(55638793, +), CAediting_1391575(55638802, +), CAediting_1391576(55638804, +), CAediting_1391577(55638810, +), CAediting_1391578(55638811, +), CAediting_1391579(55638812, +), CAediting_1391580(55638822, +), CAediting_1391581(55638842, +), CAediting_1391582(55638853, +), CAediting_1391583(55638871, +), CAediting_1391584(55638878, +), CAediting_1391585(55638884, +), CAediting_1391586(55638885, +), CAediting_1391587(55638901, +), CAediting_1391588(55638908, +), CAediting_1391589(55638909, +), CAediting_1391590(55638911, +), CAediting_1391591(55638914, +), CAediting_1391592(55638916, +), CAediting_1391593(55638917, +), CAediting_1391594(55638920, +), CAediting_1391595(55638925, +), CAediting_1391596(55638933, +), CAediting_1391597(55638946, +), CAediting_1391598(55638950, +), CAediting_1391599(55638955, +), CAediting_1391600(55638958, +), CAediting_1391601(55638966, +), CAediting_1391602(55638988, +), CAediting_1391603(55638993, +), CAediting_1391604(55638994, +), CAediting_1391605(55639023, +), CAediting_1391606(55639024, +), CAediting_1391607(55639344, +), CAediting_1391608(55639346, +), CAediting_1391609(55639350, +), CAediting_1391610(55639351, +), CAediting_1391611(55639356, +), CAediting_1391612(55639357, +), CAediting_1391613(55639363, +), CAediting_1391614(55639376, +), CAediting_1391615(55639382, +), CAediting_1391616(55639393, +), CAediting_1391617(55639397, +), CAediting_1391618(55639403, +), CAediting_1391619(55639408, +), CAediting_1391620(55639430, +), CAediting_1391621(55639432, +), CAediting_1391622(55639638, +), CAediting_1391623(55639642, +), CAediting_1391624(55639660, +), CAediting_1391625(55639667, +), CAediting_1391626(55639670, +), CAediting_1391627(55639678, +), CAediting_1391628(55639681, +), CAediting_1391629(55639689, +), CAediting_1391630(55639691, +), CAediting_1391631(55639696, +), CAediting_1391632(55639697, +), CAediting_1391633(55639703, +), CAediting_1391634(55639716, +), CAediting_1391635(55639721, +), CAediting_1391636(55639734, +), CAediting_1391637(55639743, +), CAediting_1391638(55639769, +), CAediting_1391639(55639782, +), CAediting_1391640(55639797, +), CAediting_1391641(55639800, +), CAediting_1391642(55639805, +), CAediting_1391643(55639808, +), CAediting_1391644(55639814, +), CAediting_1391645(55639839, +), CAediting_1391646(55639846, +), CAediting_1391647(55639851, +), CAediting_1391648(55639856, +), CAediting_1391649(55639878, +), CAediting_1391650(55639879, +), CAediting_1391651(55639891, +), CAediting_1391652(55639997, +), CAediting_1391653(55640233, +), CAediting_1391654(55640738, +), CAediting_1391655(55640754, +), |
Top |
RNA editing positional annotations for ZNF580 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_1391508 | chr19_55637024_+ | intronic |
CAediting_1391509 | chr19_55637041_+ | intronic |
CAediting_1391510 | chr19_55637068_+ | intronic |
CAediting_1391511 | chr19_55637096_+ | intronic |
CAediting_1391512 | chr19_55637146_+ | intronic |
CAediting_1391513 | chr19_55637258_+ | intronic |
CAediting_1391514 | chr19_55637278_+ | intronic |
CAediting_1391515 | chr19_55637280_+ | intronic |
CAediting_1391516 | chr19_55637281_+ | intronic |
CAediting_1391517 | chr19_55637303_+ | intronic |
CAediting_1391518 | chr19_55637307_+ | intronic |
CAediting_1391519 | chr19_55637313_+ | intronic |
CAediting_1391520 | chr19_55637337_+ | intronic |
CAediting_1391521 | chr19_55637350_+ | intronic |
CAediting_1391522 | chr19_55637352_+ | intronic |
CAediting_1391523 | chr19_55637359_+ | intronic |
CAediting_1391524 | chr19_55637380_+ | intronic |
CAediting_1391525 | chr19_55637390_+ | intronic |
CAediting_1391526 | chr19_55637398_+ | intronic |
CAediting_1391527 | chr19_55637416_+ | intronic |
CAediting_1391528 | chr19_55637417_+ | intronic |
CAediting_1391529 | chr19_55637422_+ | intronic |
CAediting_1391530 | chr19_55637457_+ | intronic |
CAediting_1391531 | chr19_55637458_+ | intronic |
CAediting_1391532 | chr19_55637482_+ | intronic |
CAediting_1391533 | chr19_55637507_+ | intronic |
CAediting_1391534 | chr19_55638261_+ | intronic |
CAediting_1391535 | chr19_55638282_+ | intronic |
CAediting_1391536 | chr19_55638294_+ | intronic |
CAediting_1391537 | chr19_55638300_+ | intronic |
CAediting_1391538 | chr19_55638302_+ | intronic |
CAediting_1391539 | chr19_55638303_+ | intronic |
CAediting_1391540 | chr19_55638318_+ | intronic |
CAediting_1391541 | chr19_55638319_+ | intronic |
CAediting_1391542 | chr19_55638338_+ | intronic |
CAediting_1391543 | chr19_55638356_+ | intronic |
CAediting_1391544 | chr19_55638364_+ | intronic |
CAediting_1391545 | chr19_55638365_+ | intronic |
CAediting_1391546 | chr19_55638368_+ | intronic |
CAediting_1391547 | chr19_55638378_+ | intronic |
CAediting_1391548 | chr19_55638380_+ | intronic |
CAediting_1391549 | chr19_55638400_+ | intronic |
CAediting_1391550 | chr19_55638404_+ | intronic |
CAediting_1391551 | chr19_55638419_+ | intronic |
CAediting_1391552 | chr19_55638429_+ | intronic |
CAediting_1391553 | chr19_55638434_+ | intronic |
CAediting_1391554 | chr19_55638436_+ | intronic |
CAediting_1391555 | chr19_55638473_+ | intronic |
CAediting_1391556 | chr19_55638474_+ | intronic |
CAediting_1391557 | chr19_55638495_+ | intronic |
CAediting_1391558 | chr19_55638497_+ | intronic |
CAediting_1391559 | chr19_55638509_+ | intronic |
CAediting_1391560 | chr19_55638511_+ | intronic |
CAediting_1391561 | chr19_55638711_+ | intronic |
CAediting_1391562 | chr19_55638725_+ | intronic |
CAediting_1391563 | chr19_55638733_+ | intronic |
CAediting_1391564 | chr19_55638734_+ | intronic |
CAediting_1391565 | chr19_55638739_+ | intronic |
CAediting_1391566 | chr19_55638750_+ | intronic |
CAediting_1391567 | chr19_55638756_+ | intronic |
CAediting_1391568 | chr19_55638760_+ | intronic |
CAediting_1391569 | chr19_55638769_+ | intronic |
CAediting_1391570 | chr19_55638774_+ | intronic |
CAediting_1391571 | chr19_55638779_+ | intronic |
CAediting_1391572 | chr19_55638782_+ | intronic |
CAediting_1391573 | chr19_55638790_+ | intronic |
CAediting_1391574 | chr19_55638793_+ | intronic |
CAediting_1391575 | chr19_55638802_+ | intronic |
CAediting_1391576 | chr19_55638804_+ | intronic |
CAediting_1391577 | chr19_55638810_+ | intronic |
CAediting_1391578 | chr19_55638811_+ | intronic |
CAediting_1391579 | chr19_55638812_+ | intronic |
CAediting_1391580 | chr19_55638822_+ | intronic |
CAediting_1391581 | chr19_55638842_+ | intronic |
CAediting_1391582 | chr19_55638853_+ | intronic |
CAediting_1391583 | chr19_55638871_+ | intronic |
CAediting_1391584 | chr19_55638878_+ | intronic |
CAediting_1391585 | chr19_55638884_+ | intronic |
CAediting_1391586 | chr19_55638885_+ | intronic |
CAediting_1391587 | chr19_55638901_+ | intronic |
CAediting_1391588 | chr19_55638908_+ | intronic |
CAediting_1391589 | chr19_55638909_+ | intronic |
CAediting_1391590 | chr19_55638911_+ | intronic |
CAediting_1391591 | chr19_55638914_+ | intronic |
CAediting_1391592 | chr19_55638916_+ | intronic |
CAediting_1391593 | chr19_55638917_+ | intronic |
CAediting_1391594 | chr19_55638920_+ | intronic |
CAediting_1391595 | chr19_55638925_+ | intronic |
CAediting_1391596 | chr19_55638933_+ | intronic |
CAediting_1391597 | chr19_55638946_+ | intronic |
CAediting_1391598 | chr19_55638950_+ | intronic |
CAediting_1391599 | chr19_55638955_+ | intronic |
CAediting_1391600 | chr19_55638958_+ | intronic |
CAediting_1391601 | chr19_55638966_+ | intronic |
CAediting_1391602 | chr19_55638988_+ | intronic |
CAediting_1391603 | chr19_55638993_+ | intronic |
CAediting_1391604 | chr19_55638994_+ | intronic |
CAediting_1391605 | chr19_55639023_+ | intronic |
CAediting_1391606 | chr19_55639024_+ | intronic |
CAediting_1391607 | chr19_55639344_+ | intronic |
CAediting_1391608 | chr19_55639346_+ | intronic |
CAediting_1391609 | chr19_55639350_+ | intronic |
CAediting_1391610 | chr19_55639351_+ | intronic |
CAediting_1391611 | chr19_55639356_+ | intronic |
CAediting_1391612 | chr19_55639357_+ | intronic |
CAediting_1391613 | chr19_55639363_+ | intronic |
CAediting_1391614 | chr19_55639376_+ | intronic |
CAediting_1391615 | chr19_55639382_+ | intronic |
CAediting_1391616 | chr19_55639393_+ | intronic |
CAediting_1391617 | chr19_55639397_+ | intronic |
CAediting_1391618 | chr19_55639403_+ | intronic |
CAediting_1391619 | chr19_55639408_+ | intronic |
CAediting_1391620 | chr19_55639430_+ | intronic |
CAediting_1391621 | chr19_55639432_+ | intronic |
CAediting_1391622 | chr19_55639638_+ | intronic |
CAediting_1391623 | chr19_55639642_+ | intronic |
CAediting_1391624 | chr19_55639660_+ | intronic |
CAediting_1391625 | chr19_55639667_+ | intronic |
CAediting_1391626 | chr19_55639670_+ | intronic |
CAediting_1391627 | chr19_55639678_+ | intronic |
CAediting_1391628 | chr19_55639681_+ | intronic |
CAediting_1391629 | chr19_55639689_+ | intronic |
CAediting_1391630 | chr19_55639691_+ | intronic |
CAediting_1391631 | chr19_55639696_+ | intronic |
CAediting_1391632 | chr19_55639697_+ | intronic |
CAediting_1391633 | chr19_55639703_+ | intronic |
CAediting_1391634 | chr19_55639716_+ | intronic |
CAediting_1391635 | chr19_55639721_+ | intronic |
CAediting_1391636 | chr19_55639734_+ | intronic |
CAediting_1391637 | chr19_55639743_+ | intronic |
CAediting_1391638 | chr19_55639769_+ | intronic |
CAediting_1391639 | chr19_55639782_+ | intronic |
CAediting_1391640 | chr19_55639797_+ | intronic |
CAediting_1391641 | chr19_55639800_+ | intronic |
CAediting_1391642 | chr19_55639805_+ | intronic |
CAediting_1391643 | chr19_55639808_+ | intronic |
CAediting_1391644 | chr19_55639814_+ | intronic |
CAediting_1391645 | chr19_55639839_+ | intronic |
CAediting_1391646 | chr19_55639846_+ | intronic |
CAediting_1391647 | chr19_55639851_+ | intronic |
CAediting_1391648 | chr19_55639856_+ | intronic |
CAediting_1391649 | chr19_55639878_+ | intronic |
CAediting_1391650 | chr19_55639879_+ | intronic |
CAediting_1391651 | chr19_55639891_+ | intronic |
CAediting_1391652 | chr19_55639997_+ | intronic |
CAediting_1391653 | chr19_55640233_+ | intronic |
CAediting_1391654 | chr19_55640738_+ | intronic |
CAediting_1391655 | chr19_55640754_+ | intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1391508 | chr19_55637024_+ | SINE | Alu | AluJr |
CAediting_1391509 | chr19_55637041_+ | SINE | Alu | AluJr |
CAediting_1391510 | chr19_55637068_+ | SINE | Alu | AluJr |
CAediting_1391511 | chr19_55637096_+ | SINE | Alu | AluJr |
CAediting_1391512 | chr19_55637146_+ | SINE | Alu | AluJr |
CAediting_1391513 | chr19_55637258_+ | SINE | Alu | AluSz |
CAediting_1391514 | chr19_55637278_+ | SINE | Alu | AluSz |
CAediting_1391515 | chr19_55637280_+ | SINE | Alu | AluSz |
CAediting_1391516 | chr19_55637281_+ | SINE | Alu | AluSz |
CAediting_1391517 | chr19_55637303_+ | SINE | Alu | AluSz |
CAediting_1391518 | chr19_55637307_+ | SINE | Alu | AluSz |
CAediting_1391519 | chr19_55637313_+ | SINE | Alu | AluSz |
CAediting_1391520 | chr19_55637337_+ | SINE | Alu | AluSz |
CAediting_1391521 | chr19_55637350_+ | SINE | Alu | AluSz |
CAediting_1391522 | chr19_55637352_+ | SINE | Alu | AluSz |
CAediting_1391523 | chr19_55637359_+ | SINE | Alu | AluSz |
CAediting_1391524 | chr19_55637380_+ | SINE | Alu | AluSz |
CAediting_1391525 | chr19_55637390_+ | SINE | Alu | AluSz |
CAediting_1391526 | chr19_55637398_+ | SINE | Alu | AluSz |
CAediting_1391527 | chr19_55637416_+ | SINE | Alu | AluSz |
CAediting_1391528 | chr19_55637417_+ | SINE | Alu | AluSz |
CAediting_1391529 | chr19_55637422_+ | SINE | Alu | AluSz |
CAediting_1391530 | chr19_55637457_+ | SINE | Alu | AluSz |
CAediting_1391531 | chr19_55637458_+ | SINE | Alu | AluSz |
CAediting_1391532 | chr19_55637482_+ | SINE | Alu | AluSz |
CAediting_1391533 | chr19_55637507_+ | SINE | Alu | AluSz |
CAediting_1391534 | chr19_55638261_+ | SINE | Alu | AluSc |
CAediting_1391535 | chr19_55638282_+ | SINE | Alu | AluSc |
CAediting_1391536 | chr19_55638294_+ | SINE | Alu | AluSc |
CAediting_1391537 | chr19_55638300_+ | SINE | Alu | AluSc |
CAediting_1391538 | chr19_55638302_+ | SINE | Alu | AluSc |
CAediting_1391539 | chr19_55638303_+ | SINE | Alu | AluSc |
CAediting_1391540 | chr19_55638318_+ | SINE | Alu | AluSc |
CAediting_1391541 | chr19_55638319_+ | SINE | Alu | AluSc |
CAediting_1391542 | chr19_55638338_+ | SINE | Alu | AluSc |
CAediting_1391543 | chr19_55638356_+ | SINE | Alu | AluSc |
CAediting_1391544 | chr19_55638364_+ | SINE | Alu | AluSc |
CAediting_1391545 | chr19_55638365_+ | SINE | Alu | AluSc |
CAediting_1391546 | chr19_55638368_+ | SINE | Alu | AluSc |
CAediting_1391547 | chr19_55638378_+ | SINE | Alu | AluSc |
CAediting_1391548 | chr19_55638380_+ | SINE | Alu | AluSc |
CAediting_1391549 | chr19_55638400_+ | SINE | Alu | AluSc |
CAediting_1391550 | chr19_55638404_+ | SINE | Alu | AluSc |
CAediting_1391551 | chr19_55638419_+ | SINE | Alu | AluSc |
CAediting_1391552 | chr19_55638429_+ | SINE | Alu | AluSc |
CAediting_1391553 | chr19_55638434_+ | SINE | Alu | AluSc |
CAediting_1391554 | chr19_55638436_+ | SINE | Alu | AluSc |
CAediting_1391555 | chr19_55638473_+ | SINE | Alu | AluSc |
CAediting_1391556 | chr19_55638474_+ | SINE | Alu | AluSc |
CAediting_1391557 | chr19_55638495_+ | SINE | Alu | AluSc |
CAediting_1391558 | chr19_55638497_+ | SINE | Alu | AluSc |
CAediting_1391559 | chr19_55638509_+ | SINE | Alu | AluSc |
CAediting_1391560 | chr19_55638511_+ | SINE | Alu | AluSc |
CAediting_1391561 | chr19_55638711_+ | SINE | Alu | AluSx |
CAediting_1391562 | chr19_55638725_+ | SINE | Alu | AluSx |
CAediting_1391563 | chr19_55638733_+ | SINE | Alu | AluSx |
CAediting_1391564 | chr19_55638734_+ | SINE | Alu | AluSx |
CAediting_1391565 | chr19_55638739_+ | SINE | Alu | AluSx |
CAediting_1391566 | chr19_55638750_+ | SINE | Alu | AluSx |
CAediting_1391567 | chr19_55638756_+ | SINE | Alu | AluSx |
CAediting_1391568 | chr19_55638760_+ | SINE | Alu | AluSx |
CAediting_1391569 | chr19_55638769_+ | SINE | Alu | AluSx |
CAediting_1391570 | chr19_55638774_+ | SINE | Alu | AluSx |
CAediting_1391571 | chr19_55638779_+ | SINE | Alu | AluSx |
CAediting_1391572 | chr19_55638782_+ | SINE | Alu | AluSx |
CAediting_1391573 | chr19_55638790_+ | SINE | Alu | AluSx |
CAediting_1391574 | chr19_55638793_+ | SINE | Alu | AluSx |
CAediting_1391575 | chr19_55638802_+ | SINE | Alu | AluSx |
CAediting_1391576 | chr19_55638804_+ | SINE | Alu | AluSx |
CAediting_1391577 | chr19_55638810_+ | SINE | Alu | AluSx |
CAediting_1391578 | chr19_55638811_+ | SINE | Alu | AluSx |
CAediting_1391579 | chr19_55638812_+ | SINE | Alu | AluSx |
CAediting_1391580 | chr19_55638822_+ | SINE | Alu | AluSx |
CAediting_1391581 | chr19_55638842_+ | SINE | Alu | AluSx |
CAediting_1391582 | chr19_55638853_+ | SINE | Alu | AluSx |
CAediting_1391583 | chr19_55638871_+ | SINE | Alu | AluSx |
CAediting_1391584 | chr19_55638878_+ | SINE | Alu | AluSx |
CAediting_1391585 | chr19_55638884_+ | SINE | Alu | AluSx |
CAediting_1391586 | chr19_55638885_+ | SINE | Alu | AluSx |
CAediting_1391587 | chr19_55638901_+ | SINE | Alu | AluSx |
CAediting_1391588 | chr19_55638908_+ | SINE | Alu | AluSx |
CAediting_1391589 | chr19_55638909_+ | SINE | Alu | AluSx |
CAediting_1391590 | chr19_55638911_+ | SINE | Alu | AluSx |
CAediting_1391591 | chr19_55638914_+ | SINE | Alu | AluSx |
CAediting_1391592 | chr19_55638916_+ | SINE | Alu | AluSx |
CAediting_1391593 | chr19_55638917_+ | SINE | Alu | AluSx |
CAediting_1391594 | chr19_55638920_+ | SINE | Alu | AluSx |
CAediting_1391595 | chr19_55638925_+ | SINE | Alu | AluSx |
CAediting_1391596 | chr19_55638933_+ | SINE | Alu | AluSx |
CAediting_1391597 | chr19_55638946_+ | SINE | Alu | AluSx |
CAediting_1391598 | chr19_55638950_+ | SINE | Alu | AluSx |
CAediting_1391599 | chr19_55638955_+ | SINE | Alu | AluSx |
CAediting_1391600 | chr19_55638958_+ | SINE | Alu | AluSx |
CAediting_1391601 | chr19_55638966_+ | SINE | Alu | AluSx |
CAediting_1391602 | chr19_55638988_+ | SINE | Alu | AluSx |
CAediting_1391603 | chr19_55638993_+ | SINE | Alu | AluSx |
CAediting_1391604 | chr19_55638994_+ | SINE | Alu | AluSx |
CAediting_1391605 | chr19_55639023_+ | SINE | Alu | AluSx |
CAediting_1391606 | chr19_55639024_+ | SINE | Alu | AluSx |
CAediting_1391607 | chr19_55639344_+ | SINE | Alu | AluJb |
CAediting_1391608 | chr19_55639346_+ | SINE | Alu | AluJb |
CAediting_1391609 | chr19_55639350_+ | SINE | Alu | AluJb |
CAediting_1391610 | chr19_55639351_+ | SINE | Alu | AluJb |
CAediting_1391611 | chr19_55639356_+ | SINE | Alu | AluJb |
CAediting_1391612 | chr19_55639357_+ | SINE | Alu | AluJb |
CAediting_1391613 | chr19_55639363_+ | SINE | Alu | AluJb |
CAediting_1391614 | chr19_55639376_+ | SINE | Alu | AluJb |
CAediting_1391615 | chr19_55639382_+ | SINE | Alu | AluJb |
CAediting_1391616 | chr19_55639393_+ | SINE | Alu | AluJb |
CAediting_1391617 | chr19_55639397_+ | SINE | Alu | AluJb |
CAediting_1391618 | chr19_55639403_+ | SINE | Alu | AluJb |
CAediting_1391619 | chr19_55639408_+ | SINE | Alu | AluJb |
CAediting_1391620 | chr19_55639430_+ | SINE | Alu | AluJb |
CAediting_1391621 | chr19_55639432_+ | SINE | Alu | AluJb |
CAediting_1391622 | chr19_55639638_+ | SINE | Alu | AluSx |
CAediting_1391623 | chr19_55639642_+ | SINE | Alu | AluSx |
CAediting_1391624 | chr19_55639660_+ | SINE | Alu | AluSx |
CAediting_1391625 | chr19_55639667_+ | SINE | Alu | AluSx |
CAediting_1391626 | chr19_55639670_+ | SINE | Alu | AluSx |
CAediting_1391627 | chr19_55639678_+ | SINE | Alu | AluSx |
CAediting_1391628 | chr19_55639681_+ | SINE | Alu | AluSx |
CAediting_1391629 | chr19_55639689_+ | SINE | Alu | AluSx |
CAediting_1391630 | chr19_55639691_+ | SINE | Alu | AluSx |
CAediting_1391631 | chr19_55639696_+ | SINE | Alu | AluSx |
CAediting_1391632 | chr19_55639697_+ | SINE | Alu | AluSx |
CAediting_1391633 | chr19_55639703_+ | SINE | Alu | AluSx |
CAediting_1391634 | chr19_55639716_+ | SINE | Alu | AluSx |
CAediting_1391635 | chr19_55639721_+ | SINE | Alu | AluSx |
CAediting_1391636 | chr19_55639734_+ | SINE | Alu | AluSx |
CAediting_1391637 | chr19_55639743_+ | SINE | Alu | AluSx |
CAediting_1391638 | chr19_55639769_+ | SINE | Alu | AluSx |
CAediting_1391639 | chr19_55639782_+ | SINE | Alu | AluSx |
CAediting_1391640 | chr19_55639797_+ | SINE | Alu | AluSx |
CAediting_1391641 | chr19_55639800_+ | SINE | Alu | AluSx |
CAediting_1391642 | chr19_55639805_+ | SINE | Alu | AluSx |
CAediting_1391643 | chr19_55639808_+ | SINE | Alu | AluSx |
CAediting_1391644 | chr19_55639814_+ | SINE | Alu | AluSx |
CAediting_1391645 | chr19_55639839_+ | SINE | Alu | AluSx |
CAediting_1391646 | chr19_55639846_+ | SINE | Alu | AluSx |
CAediting_1391647 | chr19_55639851_+ | SINE | Alu | AluSx |
CAediting_1391648 | chr19_55639856_+ | SINE | Alu | AluSx |
CAediting_1391649 | chr19_55639878_+ | SINE | Alu | AluSx |
CAediting_1391650 | chr19_55639879_+ | SINE | Alu | AluSx |
CAediting_1391651 | chr19_55639891_+ | SINE | Alu | AluSx |
CAediting_1391652 | chr19_55639997_+ | DNA | hAT-Charlie | MER3 |
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RNA A-to-I editing events in the alternative splicing sites for ZNF580 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF580 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for ZNF580 |
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The effects of the RNA editing to the miRNA binding sites for ZNF580 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for ZNF580 |
![]() * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for ZNF580 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
LGG | CAediting_1391508 | chr19_55637024_+ | . | . | 0.0306063185551669 | 0.281786304016146 | . | . |
LAML | CAediting_1391508 | chr19_55637024_+ | . | . | . | . | 0.0229278333536464 | 0.321229042966472 |
BRCA | CAediting_1391528 | chr19_55637417_+ | 0.000160145972319849 | 0.422383424301983 | . | . | . | . |
KIRC | CAediting_1391528 | chr19_55637417_+ | 0.00318433116818353 | 0.371686406060501 | . | . | . | . |
BRCA | CAediting_1391537 | chr19_55638300_+ | 0.0305866016172574 | 0.262480368973985 | . | . | . | . |
STAD | CAediting_1391537 | chr19_55638300_+ | 0.0445731114535381 | 0.237480980815271 | . | . | . | . |
THCA | CAediting_1391541 | chr19_55638319_+ | . | . | 0.0275191711700813 | 0.308703904527506 | . | . |
BRCA | CAediting_1391551 | chr19_55638419_+ | 0.00728431374224021 | 0.164502815541483 | . | . | 0.0374074565058663 | 0.127931525291315 |
PRAD | CAediting_1391551 | chr19_55638419_+ | . | . | 0.0354694730135477 | 0.209531424694269 | . | . |
ESCA | CAediting_1391551 | chr19_55638419_+ | . | . | 0.00761015581159551 | 0.330686997112872 | . | . |
OV | CAediting_1391551 | chr19_55638419_+ | 0.000243643277771065 | 0.317706000899 | . | . | . | . |
STAD | CAediting_1391553 | chr19_55638434_+ | 0.0360709819937641 | 0.233304663533723 | . | . | . | . |
PRAD | CAediting_1391559 | chr19_55638509_+ | . | . | 0.0108430681095937 | 0.278320184439046 | . | . |
BRCA | CAediting_1391564 | chr19_55638734_+ | 1.65914647997125e-05 | 0.239665235640197 | . | . | . | . |
LUAD | CAediting_1391564 | chr19_55638734_+ | 3.55092991965917e-06 | 0.522157923171205 | . | . | . | . |
PRAD | CAediting_1391564 | chr19_55638734_+ | 0.0436018166743733 | 0.166124411589784 | . | . | . | . |
STAD | CAediting_1391564 | chr19_55638734_+ | 0.00663082616635766 | 0.256264059521074 | . | . | . | . |
THCA | CAediting_1391564 | chr19_55638734_+ | 0.0177332527737482 | 0.218896785926619 | . | . | . | . |
ESCA | CAediting_1391564 | chr19_55638734_+ | . | . | 0.00268075941645892 | 0.348731868968157 | . | . |
ESCA | CAediting_1391568 | chr19_55638760_+ | . | . | 0.0146689961099848 | 0.26086925578066 | . | . |
BRCA | CAediting_1391583 | chr19_55638871_+ | 0.0215701338566274 | 0.178802877459414 | . | . | . | . |
OV | CAediting_1391583 | chr19_55638871_+ | . | . | . | . | 0.0274228620774306 | 0.183185032051587 |
STAD | CAediting_1391585 | chr19_55638884_+ | 0.0155684857856457 | 0.216826781618296 | . | . | . | . |
BRCA | CAediting_1391586 | chr19_55638885_+ | 0.00124854316468646 | 0.208013118454485 | . | . | . | . |
STAD | CAediting_1391586 | chr19_55638885_+ | 0.0105391403303877 | 0.161504128969908 | . | . | . | . |
OV | CAediting_1391586 | chr19_55638885_+ | 0.00911089132464085 | 0.195508980040469 | . | . | . | . |
STAD | CAediting_1391588 | chr19_55638908_+ | 0.0117626596937029 | 0.181479390855677 | . | . | . | . |
BRCA | CAediting_1391594 | chr19_55638920_+ | 0.00685865768524733 | 0.148791676663688 | . | . | . | . |
STAD | CAediting_1391594 | chr19_55638920_+ | 0.0090350084657254 | 0.155487650724002 | . | . | . | . |
LGG | CAediting_1391595 | chr19_55638925_+ | 0.035241792463002 | 0.298496578856142 | . | . | . | . |
BRCA | CAediting_1391595 | chr19_55638925_+ | 0.0174054875314656 | 0.13884585560748 | . | . | . | . |
STAD | CAediting_1391595 | chr19_55638925_+ | 7.50506196909336e-05 | 0.2439682583129 | . | . | . | . |
BRCA | CAediting_1391610 | chr19_55639351_+ | 0.0316784593800816 | 0.123259285376395 | . | . | . | . |
PCPG | CAediting_1391612 | chr19_55639357_+ | . | . | 0.021041462949189 | 0.277352537263415 | 0.0369238789080208 | 0.251735816651346 |
BRCA | CAediting_1391613 | chr19_55639363_+ | 0.0313736560047398 | 0.111022754611764 | . | . | . | . |
KIRC | CAediting_1391613 | chr19_55639363_+ | 0.0378351961100262 | 0.148838552847648 | . | . | . | . |
BRCA | CAediting_1391618 | chr19_55639403_+ | . | . | 7.03436297404573e-05 | 0.357571378569517 | . | . |
KIRC | CAediting_1391618 | chr19_55639403_+ | . | . | 0.00486558012307969 | 0.288097720100729 | . | . |
PCPG | CAediting_1391618 | chr19_55639403_+ | . | . | 0.0248808798678976 | 0.31391292749386 | . | . |
BRCA | CAediting_1391620 | chr19_55639430_+ | 0.0136781539401938 | 0.27297456387601 | . | . | . | . |
STAD | CAediting_1391632 | chr19_55639697_+ | . | . | 0.00495783874550632 | 0.283097122372907 | . | . |
BRCA | CAediting_1391636 | chr19_55639734_+ | 0.0162830362678588 | 0.249907556111023 | . | . | . | . |
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Relation with cancer stages for ZNF580 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BLCA | pathologic_stage | CAediting_1391613 | chr19_55639363_+ | 0.0313586957471989 | 0.26525537248413 |
BRCA | pathologic_stage | CAediting_1391594 | chr19_55638920_+ | 0.000349446797158972 | 0.198662763318859 |
BRCA | pathologic_stage | CAediting_1391640 | chr19_55639797_+ | 0.0285875688821208 | 0.236165521200765 |
ESCA | clinical_stage | CAediting_1391551 | chr19_55638419_+ | 0.00854371842079472 | -0.571042892860258 |
ESCA | clinical_stage | CAediting_1391583 | chr19_55638871_+ | 0.00673142621437857 | -0.44359116132769 |
ESCA | pathologic_stage | CAediting_1391568 | chr19_55638760_+ | 0.0417467175450405 | 0.237331676134001 |
ESCA | pathologic_stage | CAediting_1391588 | chr19_55638908_+ | 0.041030019969542 | 0.210066327475067 |
ESCA | pathologic_stage | CAediting_1391613 | chr19_55639363_+ | 0.049313672599806 | 0.266385161809534 |
KIRC | pathologic_stage | CAediting_1391551 | chr19_55638419_+ | 0.0425287626906216 | 0.171687578857198 |
KIRC | pathologic_stage | CAediting_1391553 | chr19_55638434_+ | 0.0257594159807089 | 0.274422531846799 |
KIRC | pathologic_stage | CAediting_1391568 | chr19_55638760_+ | 0.00543000673799077 | 0.338537497689282 |
KIRC | pathologic_stage | CAediting_1391586 | chr19_55638885_+ | 0.0310228556655863 | 0.181094285611292 |
KIRC | pathologic_stage | CAediting_1391594 | chr19_55638920_+ | 0.00499678224467035 | 0.217573144618126 |
KIRC | pathologic_stage | CAediting_1391612 | chr19_55639357_+ | 0.0282883586845161 | 0.233893704919416 |
OV | clinical_stage | CAediting_1391568 | chr19_55638760_+ | 0.0427376114643964 | -0.212911487182032 |
OV | clinical_stage | CAediting_1391632 | chr19_55639697_+ | 0.0282344850681332 | -0.232652576492372 |
STAD | pathologic_stage | CAediting_1391553 | chr19_55638434_+ | 0.03425177620695 | 0.240072123011772 |
STAD | pathologic_stage | CAediting_1391568 | chr19_55638760_+ | 0.00824721774066711 | 0.230791528014035 |
THCA | pathologic_stage | CAediting_1391618 | chr19_55639403_+ | 0.000502088813446614 | -0.469970701773015 |
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Relation with survival for ZNF580 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
KIRC | CAediting_1391583 | chr19_55638871_+ | 0.00216718023246742 | 0.00321942 | 34.0989 |
KIRC | CAediting_1391586 | chr19_55638885_+ | 0.0177763630915547 | 0.0305002 | 6.56891 |
KIRC | CAediting_1391594 | chr19_55638920_+ | 0.00391445920236444 | 0.000106718 | 54.9476 |
KIRC | CAediting_1391595 | chr19_55638925_+ | 0.0043281183695264 | 0.0377709 | 11.1364 |
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RelatedDrugs for ZNF580 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF580 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |