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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CERCAM (CAeditome ID:51148)

Gene summary for CERCAM

check button Gene summary
Gene informationGene symbol

CERCAM

Gene ID

51148

Gene namecerebral endothelial cell adhesion molecule
SynonymsCEECAM1|GLT25D3
Cytomap

9q34.11

Type of geneprotein-coding
Descriptioninactive glycosyltransferase 25 family member 3cerebral cell adhesion moleculecerebral endothelial cell adhesion molecule 1glycosyltransferase 25 domain containing 3glycosyltransferase 25 family member 3probable inactive glycosyltransferase 25 family
Modification date20210518
UniProtAcc

Q5T4B2

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CERCAM

GO:0007155

Inactive glycosyltransferase 25 family member 3

10608765


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RNA A-to-I events for CERCAM

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000167123.17

check button RNA A-to-I editing events in Cancer.
CAediting_713787(128418860, +), CAediting_713788(128422474, +), CAediting_713789(128422483, +), CAediting_713790(128422489, +), CAediting_713791(128422496, +), CAediting_713792(128423496, +), CAediting_713793(128423569, +), CAediting_713794(128424797, +), CAediting_713795(128424803, +), CAediting_713796(128424822, +), CAediting_713797(128424823, +), CAediting_713798(128424851, +), CAediting_713799(128424861, +), CAediting_713800(128424863, +), CAediting_713801(128424888, +), CAediting_713802(128424952, +), CAediting_713803(128424966, +), CAediting_713804(128425089, +), CAediting_713805(128425131, +), CAediting_713806(128425407, +), CAediting_713807(128425412, +), CAediting_713808(128425413, +), CAediting_713809(128425430, +), CAediting_713810(128425485, +), CAediting_713811(128425486, +), CAediting_713812(128425490, +), CAediting_713813(128425611, +), CAediting_713814(128425615, +), CAediting_713815(128425641, +), CAediting_713816(128425651, +), CAediting_713817(128425653, +), CAediting_713818(128425694, +), CAediting_713819(128425763, +), CAediting_713820(128425773, +), CAediting_713821(128425883, +), CAediting_713822(128425886, +), CAediting_713823(128425891, +), CAediting_713824(128425917, +), CAediting_713825(128425922, +), CAediting_713826(128425944, +), CAediting_713827(128425946, +), CAediting_713828(128425966, +), CAediting_713829(128425970, +), CAediting_713830(128426066, +), CAediting_713831(128426078, +), CAediting_713832(128426080, +), CAediting_713833(128426120, +), CAediting_713834(128426123, +), CAediting_713835(128426139, +), CAediting_713836(128426140, +), CAediting_713837(128426218, +), CAediting_713838(128426227, +), CAediting_713839(128426230, +), CAediting_713840(128426231, +), CAediting_713841(128426271, +), CAediting_713842(128426565, +), CAediting_713843(128427131, +), CAediting_713844(128427132, +), CAediting_713845(128427213, +), CAediting_713846(128427238, +), CAediting_713847(128427242, +), CAediting_713848(128427252, +), CAediting_713849(128427270, +), CAediting_713850(128427278, +), CAediting_713851(128427279, +), CAediting_713852(128427287, +), CAediting_713853(128427293, +), CAediting_713854(128427296, +), CAediting_713855(128427310, +), CAediting_713856(128427335, +), CAediting_713857(128427375, +), CAediting_713858(128427387, +), CAediting_713859(128427509, +), CAediting_713860(128427579, +), CAediting_713861(128427581, +), CAediting_713862(128427589, +), CAediting_713863(128427600, +), CAediting_713864(128427603, +), CAediting_713865(128427605, +), CAediting_713866(128427606, +), CAediting_713867(128427607, +), CAediting_713868(128427609, +), CAediting_713869(128427613, +), CAediting_713870(128427614, +), CAediting_713871(128427615, +), CAediting_713872(128427644, +), CAediting_713873(128427650, +), CAediting_713874(128427654, +), CAediting_713875(128427658, +), CAediting_713876(128427671, +), CAediting_713877(128427684, +), CAediting_713878(128427685, +), CAediting_713879(128427697, +), CAediting_713880(128427710, +), CAediting_713881(128427715, +), CAediting_713882(128427722, +), CAediting_713883(128427752, +), CAediting_713884(128429882, +), CAediting_713885(128430039, +), CAediting_713886(128430178, +), CAediting_713887(128431883, +), CAediting_713888(128432069, +), CAediting_713889(128432087, +), CAediting_713890(128432090, +), CAediting_713891(128432143, +), CAediting_713892(128432471, +), CAediting_713893(128432520, +), CAediting_713894(128432586, +), CAediting_713895(128433025, +), CAediting_713896(128433331, +), CAediting_713897(128433353, +), CAediting_713898(128433371, +), CAediting_713899(128436615, +),

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RNA editing positional annotations for CERCAM using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_713787chr9_128418860_+intronic
CAediting_713788chr9_128422474_+UTR5
CAediting_713789chr9_128422483_+UTR5
CAediting_713790chr9_128422489_+UTR5
CAediting_713791chr9_128422496_+UTR5
CAediting_713792chr9_128423496_+ncRNA_intronic
CAediting_713793chr9_128423569_+ncRNA_intronic
CAediting_713794chr9_128424797_+ncRNA_intronic
CAediting_713795chr9_128424803_+ncRNA_intronic
CAediting_713796chr9_128424822_+ncRNA_intronic
CAediting_713797chr9_128424823_+ncRNA_intronic
CAediting_713798chr9_128424851_+ncRNA_intronic
CAediting_713799chr9_128424861_+ncRNA_intronic
CAediting_713800chr9_128424863_+ncRNA_intronic
CAediting_713801chr9_128424888_+ncRNA_intronic
CAediting_713802chr9_128424952_+ncRNA_intronic
CAediting_713803chr9_128424966_+ncRNA_intronic
CAediting_713804chr9_128425089_+ncRNA_intronic
CAediting_713805chr9_128425131_+ncRNA_intronic
CAediting_713806chr9_128425407_+ncRNA_intronic
CAediting_713807chr9_128425412_+ncRNA_intronic
CAediting_713808chr9_128425413_+ncRNA_intronic
CAediting_713809chr9_128425430_+ncRNA_intronic
CAediting_713810chr9_128425485_+ncRNA_intronic
CAediting_713811chr9_128425486_+ncRNA_intronic
CAediting_713812chr9_128425490_+ncRNA_intronic
CAediting_713813chr9_128425611_+ncRNA_intronic
CAediting_713814chr9_128425615_+ncRNA_intronic
CAediting_713815chr9_128425641_+ncRNA_intronic
CAediting_713816chr9_128425651_+ncRNA_intronic
CAediting_713817chr9_128425653_+ncRNA_intronic
CAediting_713818chr9_128425694_+ncRNA_intronic
CAediting_713819chr9_128425763_+ncRNA_intronic
CAediting_713820chr9_128425773_+ncRNA_intronic
CAediting_713821chr9_128425883_+ncRNA_intronic
CAediting_713822chr9_128425886_+ncRNA_intronic
CAediting_713823chr9_128425891_+ncRNA_intronic
CAediting_713824chr9_128425917_+ncRNA_intronic
CAediting_713825chr9_128425922_+ncRNA_intronic
CAediting_713826chr9_128425944_+ncRNA_intronic
CAediting_713827chr9_128425946_+ncRNA_intronic
CAediting_713828chr9_128425966_+ncRNA_intronic
CAediting_713829chr9_128425970_+ncRNA_intronic
CAediting_713830chr9_128426066_+ncRNA_intronic
CAediting_713831chr9_128426078_+ncRNA_intronic
CAediting_713832chr9_128426080_+ncRNA_intronic
CAediting_713833chr9_128426120_+ncRNA_intronic
CAediting_713834chr9_128426123_+ncRNA_intronic
CAediting_713835chr9_128426139_+ncRNA_intronic
CAediting_713836chr9_128426140_+ncRNA_intronic
CAediting_713837chr9_128426218_+ncRNA_intronic
CAediting_713838chr9_128426227_+ncRNA_intronic
CAediting_713839chr9_128426230_+ncRNA_intronic
CAediting_713840chr9_128426231_+ncRNA_intronic
CAediting_713841chr9_128426271_+ncRNA_intronic
CAediting_713842chr9_128426565_+ncRNA_intronic
CAediting_713843chr9_128427131_+ncRNA_intronic
CAediting_713844chr9_128427132_+ncRNA_intronic
CAediting_713845chr9_128427213_+ncRNA_intronic
CAediting_713846chr9_128427238_+ncRNA_intronic
CAediting_713847chr9_128427242_+ncRNA_intronic
CAediting_713848chr9_128427252_+ncRNA_intronic
CAediting_713849chr9_128427270_+ncRNA_intronic
CAediting_713850chr9_128427278_+ncRNA_intronic
CAediting_713851chr9_128427279_+ncRNA_intronic
CAediting_713852chr9_128427287_+ncRNA_intronic
CAediting_713853chr9_128427293_+ncRNA_intronic
CAediting_713854chr9_128427296_+ncRNA_intronic
CAediting_713855chr9_128427310_+ncRNA_intronic
CAediting_713856chr9_128427335_+ncRNA_intronic
CAediting_713857chr9_128427375_+ncRNA_intronic
CAediting_713858chr9_128427387_+ncRNA_intronic
CAediting_713859chr9_128427509_+ncRNA_intronic
CAediting_713860chr9_128427579_+ncRNA_intronic
CAediting_713861chr9_128427581_+ncRNA_intronic
CAediting_713862chr9_128427589_+ncRNA_intronic
CAediting_713863chr9_128427600_+ncRNA_intronic
CAediting_713864chr9_128427603_+ncRNA_intronic
CAediting_713865chr9_128427605_+ncRNA_intronic
CAediting_713866chr9_128427606_+ncRNA_intronic
CAediting_713867chr9_128427607_+ncRNA_intronic
CAediting_713868chr9_128427609_+ncRNA_intronic
CAediting_713869chr9_128427613_+ncRNA_intronic
CAediting_713870chr9_128427614_+ncRNA_intronic
CAediting_713871chr9_128427615_+ncRNA_intronic
CAediting_713872chr9_128427644_+ncRNA_intronic
CAediting_713873chr9_128427650_+ncRNA_splicing
CAediting_713874chr9_128427654_+ncRNA_exonic
CAediting_713875chr9_128427658_+ncRNA_exonic
CAediting_713876chr9_128427671_+ncRNA_exonic
CAediting_713877chr9_128427684_+ncRNA_exonic
CAediting_713878chr9_128427685_+ncRNA_exonic
CAediting_713879chr9_128427697_+ncRNA_exonic
CAediting_713880chr9_128427710_+ncRNA_exonic
CAediting_713881chr9_128427715_+ncRNA_exonic
CAediting_713882chr9_128427722_+ncRNA_exonic
CAediting_713883chr9_128427752_+ncRNA_exonic
CAediting_713884chr9_128429882_+ncRNA_intronic
CAediting_713885chr9_128430039_+ncRNA_intronic
CAediting_713886chr9_128430178_+ncRNA_intronic
CAediting_713887chr9_128431883_+ncRNA_exonic
CAediting_713888chr9_128432069_+ncRNA_intronic
CAediting_713889chr9_128432087_+ncRNA_intronic
CAediting_713890chr9_128432090_+ncRNA_intronic
CAediting_713891chr9_128432143_+ncRNA_intronic
CAediting_713892chr9_128432471_+ncRNA_intronic
CAediting_713893chr9_128432520_+ncRNA_intronic
CAediting_713894chr9_128432586_+ncRNA_intronic
CAediting_713895chr9_128433025_+ncRNA_intronic
CAediting_713896chr9_128433331_+ncRNA_intronic
CAediting_713897chr9_128433353_+ncRNA_intronic
CAediting_713898chr9_128433371_+ncRNA_intronic
CAediting_713899chr9_128436615_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_713787chr9_128418860_+SINEAluAluY
CAediting_713788chr9_128422474_+SINEAluAluSx
CAediting_713789chr9_128422483_+SINEAluAluSx
CAediting_713790chr9_128422489_+SINEAluAluSx
CAediting_713791chr9_128422496_+SINEAluAluSx
CAediting_713792chr9_128423496_+SINEAluAluSq2
CAediting_713793chr9_128423569_+SINEAluAluSq2
CAediting_713794chr9_128424797_+SINEAluAluSx1
CAediting_713795chr9_128424803_+SINEAluAluSx1
CAediting_713796chr9_128424822_+SINEAluAluSx1
CAediting_713797chr9_128424823_+SINEAluAluSx1
CAediting_713798chr9_128424851_+SINEAluAluSx1
CAediting_713799chr9_128424861_+SINEAluAluSx1
CAediting_713800chr9_128424863_+SINEAluAluSx1
CAediting_713801chr9_128424888_+SINEAluAluSx1
CAediting_713802chr9_128424952_+SINEAluAluSx1
CAediting_713803chr9_128424966_+SINEAluAluSx1
CAediting_713804chr9_128425089_+SINEAluAluY
CAediting_713805chr9_128425131_+SINEAluAluY
CAediting_713806chr9_128425407_+SINEAluAluJo
CAediting_713807chr9_128425412_+SINEAluAluJo
CAediting_713808chr9_128425413_+SINEAluAluJo
CAediting_713809chr9_128425430_+SINEAluAluJo
CAediting_713810chr9_128425485_+SINEAluAluJo
CAediting_713811chr9_128425486_+SINEAluAluJo
CAediting_713812chr9_128425490_+SINEAluAluJo
CAediting_713813chr9_128425611_+SINEAluAluSp
CAediting_713814chr9_128425615_+SINEAluAluSp
CAediting_713815chr9_128425641_+SINEAluAluSp
CAediting_713816chr9_128425651_+SINEAluAluSp
CAediting_713817chr9_128425653_+SINEAluAluSp
CAediting_713818chr9_128425694_+SINEAluAluSp
CAediting_713819chr9_128425763_+SINEAluAluSp
CAediting_713820chr9_128425773_+SINEAluAluSp
CAediting_713821chr9_128425883_+SINEAluAluJb
CAediting_713822chr9_128425886_+SINEAluAluJb
CAediting_713823chr9_128425891_+SINEAluAluJb
CAediting_713824chr9_128425917_+SINEAluAluJb
CAediting_713825chr9_128425922_+SINEAluAluJb
CAediting_713826chr9_128425944_+SINEAluAluJb
CAediting_713827chr9_128425946_+SINEAluAluJb
CAediting_713828chr9_128425966_+SINEAluAluJb
CAediting_713829chr9_128425970_+SINEAluAluJb
CAediting_713830chr9_128426066_+SINEAluAluJb
CAediting_713831chr9_128426078_+SINEAluAluJb
CAediting_713832chr9_128426080_+SINEAluAluJb
CAediting_713833chr9_128426120_+SINEAluAluJo
CAediting_713834chr9_128426123_+SINEAluAluJo
CAediting_713835chr9_128426139_+SINEAluAluJo
CAediting_713836chr9_128426140_+SINEAluAluJo
CAediting_713837chr9_128426218_+SINEAluAluJo
CAediting_713838chr9_128426227_+SINEAluAluJo
CAediting_713839chr9_128426230_+SINEAluAluJo
CAediting_713840chr9_128426231_+SINEAluAluJo
CAediting_713841chr9_128426271_+SINEAluAluJo
CAediting_713842chr9_128426565_+SINEAluAluY
CAediting_713843chr9_128427131_+SINEAluAluSx1
CAediting_713844chr9_128427132_+SINEAluAluSx1
CAediting_713845chr9_128427213_+SINEAluAluSx1
CAediting_713846chr9_128427238_+SINEAluAluSx1
CAediting_713847chr9_128427242_+SINEAluAluSx1
CAediting_713848chr9_128427252_+SINEAluAluSx1
CAediting_713849chr9_128427270_+SINEAluAluSx1
CAediting_713850chr9_128427278_+SINEAluAluSx1
CAediting_713851chr9_128427279_+SINEAluAluSx1
CAediting_713852chr9_128427287_+SINEAluAluSx1
CAediting_713853chr9_128427293_+SINEAluAluSx1
CAediting_713854chr9_128427296_+SINEAluAluSx1
CAediting_713855chr9_128427310_+SINEAluAluSx1
CAediting_713856chr9_128427335_+SINEAluAluSx1
CAediting_713857chr9_128427375_+SINEAluAluSx1
CAediting_713858chr9_128427387_+SINEAluAluSx1
CAediting_713859chr9_128427509_+SINEAluAluSz
CAediting_713860chr9_128427579_+SINEAluAluSz
CAediting_713861chr9_128427581_+SINEAluAluSz
CAediting_713862chr9_128427589_+SINEAluAluSz
CAediting_713863chr9_128427600_+SINEAluAluSz
CAediting_713864chr9_128427603_+SINEAluAluSz
CAediting_713865chr9_128427605_+SINEAluAluSz
CAediting_713866chr9_128427606_+SINEAluAluSz
CAediting_713867chr9_128427607_+SINEAluAluSz
CAediting_713868chr9_128427609_+SINEAluAluSz
CAediting_713869chr9_128427613_+SINEAluAluSz
CAediting_713870chr9_128427614_+SINEAluAluSz
CAediting_713871chr9_128427615_+SINEAluAluSz
CAediting_713872chr9_128427644_+SINEAluAluSz
CAediting_713873chr9_128427650_+SINEAluAluSz
CAediting_713874chr9_128427654_+SINEAluAluSz
CAediting_713875chr9_128427658_+SINEAluAluSz
CAediting_713876chr9_128427671_+SINEAluAluSz
CAediting_713877chr9_128427684_+SINEAluAluSz
CAediting_713878chr9_128427685_+SINEAluAluSz
CAediting_713879chr9_128427697_+SINEAluAluSz
CAediting_713880chr9_128427710_+SINEAluAluSz
CAediting_713881chr9_128427715_+SINEAluAluSz
CAediting_713882chr9_128427722_+SINEAluAluSz
CAediting_713883chr9_128427752_+SINEAluAluSz
CAediting_713884chr9_128429882_+SINEAluAluSz
CAediting_713885chr9_128430039_+SINEAluAluSz
CAediting_713886chr9_128430178_+SINEAluAluSq2
CAediting_713888chr9_128432069_+SINEAluAluSx
CAediting_713889chr9_128432087_+SINEAluAluSx
CAediting_713890chr9_128432090_+SINEAluAluSx
CAediting_713891chr9_128432143_+SINEAluAluSx
CAediting_713892chr9_128432471_+SINEAluAluJb
CAediting_713893chr9_128432520_+SINEAluAluJb
CAediting_713894chr9_128432586_+SINEAluAluJb
CAediting_713895chr9_128433025_+SINEAluAluY
CAediting_713896chr9_128433331_+SINEAluAluSg
CAediting_713897chr9_128433353_+SINEAluAluSg
CAediting_713898chr9_128433371_+SINEAluAluSg
CAediting_713899chr9_128436615_+SINEAluAluSx1

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RNA A-to-I editing events in the alternative splicing sites for CERCAM

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_713863chr9_128427600_+128427599:1284276213SS0+19iTACTAAAAATACAAAAATTAGCT-16.52TGCTAAAAATACAAAAATTAGCT-16.13
ESCAediting_713864chr9_128427603_+128427599:1284276213SS0+16iTACTAAAAATACAAAAATTAGCT-16.52TACTGAAAATACAAAAATTAGCT-17.21
ESCAediting_713865chr9_128427605_+128427599:1284276213SS0+14iTACTAAAAATACAAAAATTAGCT-16.52TACTAAGAATACAAAAATTAGCT-19.67
ESCAediting_713866chr9_128427606_+128427599:1284276213SS0+13iTACTAAAAATACAAAAATTAGCT-16.52TACTAAAGATACAAAAATTAGCT-19.02
ESCAediting_713867chr9_128427607_+128427599:1284276213SS0+12iTACTAAAAATACAAAAATTAGCT-16.52TACTAAAAGTACAAAAATTAGCT-21.02
ESCAediting_713868chr9_128427609_+128427599:1284276213SS0+10iTACTAAAAATACAAAAATTAGCT-16.52TACTAAAAATGCAAAAATTAGCT-17.21
ESCAediting_713869chr9_128427613_+128427599:1284276213SS0+6iTACTAAAAATACAAAAATTAGCT-16.52TACTAAAAATACAAGAATTAGCT-21.15
ESCAediting_713870chr9_128427614_+128427599:1284276213SS0+5iTACTAAAAATACAAAAATTAGCT-16.52TACTAAAAATACAAAGATTAGCT-21.87
ESCAediting_713871chr9_128427615_+128427599:1284276213SS0+4iTACTAAAAATACAAAAATTAGCT-16.52TACTAAAAATACAAAAGTTAGCT-19.09
ESCAediting_713872chr9_128427644_+128427631:1284276533SS0+7iGGTGCACACCTGTATTCCCAGCT-12.5GGTGCACACCTGTGTTCCCAGCT-11.74
ESCAediting_713873chr9_128427650_+128427631:1284276533SS0+1iGGTGCACACCTGTATTCCCAGCT-12.5GGTGCACACCTGTATTCCCGGCT-3.75

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000167123.17.CERCAM.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000167123.17.CERCAM.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CERCAM

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CERCAM

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CERCAM

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000167123.17ENST00000372842hsa-miR-605-3p1284369751284369817mer-m8128436961128436982141-19.05
CAediting_688081chr9_63819627_+ENSG00000167123.17ENST00000372842hsa-miR-4477b1284370281284370358mer-1a128437017128437035146-12.38
CAediting_688081chr9_63819627_+ENSG00000167123.17ENST00000372842hsa-miR-4477b1284371511284371577mer-m8128437137128437158143-11.11
CAediting_748296chr10_51299626_+ENSG00000167123.17ENST00000372838hsa-miR-605-3p1284369751284369817mer-m8128436961128436982141-19.05
CAediting_688081chr9_63819627_+ENSG00000167123.17ENST00000372838hsa-miR-4477b1284370281284370358mer-1a128437017128437035146-12.38
CAediting_688081chr9_63819627_+ENSG00000167123.17ENST00000372838hsa-miR-4477b1284371511284371577mer-m8128437137128437158143-11.11
CAediting_1054808chr15_66496985_-ENSG00000167123.17ENST00000372842hsa-miR-45121284370641284370707mer-m8128437050128437071143-19.47
CAediting_1054808chr15_66496985_-ENSG00000167123.17ENST00000372838hsa-miR-45121284370641284370707mer-m8128437050128437071143-19.47

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000167123.17ENST00000372842hsa-miR-624-3p1284370971284371026mer128437084128437103140-17.75
CAediting_980496chr14_31014685_-ENSG00000167123.17ENST00000372838hsa-miR-624-3p1284370971284371026mer128437084128437103140-17.75

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CERCAM

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CERCAM

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for CERCAM

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for CERCAM

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
LGGCAediting_713877chr9_128427684_+0.03679044811033260.04349967.11305e-08

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RelatedDrugs for CERCAM

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CERCAM

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource