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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: NAA20 (CAeditome ID:51126) |
Gene summary for NAA20 |
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Gene information | Gene symbol | NAA20 | Gene ID | 51126 |
Gene name | N-alpha-acetyltransferase 20, NatB catalytic subunit | |
Synonyms | NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1 | |
Cytomap | 20p11.23 | |
Type of gene | protein-coding | |
Description | N-alpha-acetyltransferase 20N-acetyltransferase 3 homologN-acetyltransferase 5 (ARD1 homolog, S. cerevisiae)N-acetyltransferase 5 (GCN5-related, putative)N-acetyltransferase 5, ARD1 subunit (arrest-defective 1, S. cerevisiae, homolog)N-terminal acety | |
Modification date | 20210518 | |
UniProtAcc | P61599 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
NAA20 | GO:0005634 | N-alpha-acetyltransferase 20 | 25732826 |
NAA20 | GO:0005737 | N-alpha-acetyltransferase 20 | 25732826 |
NAA20 | GO:0005829 | N-alpha-acetyltransferase 20 | 0000052 |
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RNA A-to-I events for NAA20 |
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CAediting_1409409(20018357, +), CAediting_1409410(20018360, +), CAediting_1409411(20018372, +), CAediting_1409412(20018377, +), CAediting_1409413(20018378, +), CAediting_1409414(20018379, +), CAediting_1409415(20018380, +), CAediting_1409416(20018381, +), CAediting_1409417(20018382, +), CAediting_1409418(20018383, +), CAediting_1409419(20018385, +), CAediting_1409420(20018402, +), CAediting_1409421(20018403, +), CAediting_1409422(20018404, +), CAediting_1409423(20018408, +), CAediting_1409424(20018414, +), CAediting_1409425(20018415, +), CAediting_1409426(20018436, +), CAediting_1409427(20018439, +), CAediting_1409428(20018442, +), CAediting_1409429(20018447, +), CAediting_1409430(20018448, +), CAediting_1409431(20018461, +), CAediting_1409432(20018462, +), CAediting_1409433(20018474, +), CAediting_1409434(20018481, +), CAediting_1409435(20018482, +), CAediting_1409436(20018483, +), CAediting_1409437(20019050, +), CAediting_1409438(20019051, +), CAediting_1409439(20019076, +), CAediting_1409440(20019109, +), CAediting_1409441(20019130, +), CAediting_1409442(20019151, +), CAediting_1409443(20019152, +), CAediting_1409444(20019153, +), CAediting_1409445(20019154, +), CAediting_1409446(20019608, +), CAediting_1409447(20020153, +), CAediting_1409448(20020154, +), CAediting_1409449(20020155, +), CAediting_1409450(20020158, +), CAediting_1409451(20020165, +), CAediting_1409452(20020174, +), CAediting_1409453(20020175, +), CAediting_1409454(20020177, +), CAediting_1409455(20020182, +), CAediting_1409456(20020183, +), CAediting_1409457(20020205, +), CAediting_1409458(20021256, +), CAediting_1409459(20021266, +), CAediting_1409460(20023082, +), CAediting_1409461(20023088, +), CAediting_1409462(20023167, +), CAediting_1409463(20028973, +), CAediting_1409464(20028980, +), CAediting_1409465(20028985, +), CAediting_1409466(20028994, +), CAediting_1409467(20028999, +), CAediting_1409468(20029023, +), CAediting_1409469(20029068, +), CAediting_1409470(20029078, +), CAediting_1409471(20029081, +), CAediting_1409472(20029342, +), CAediting_1409473(20029353, +), CAediting_1409474(20029367, +), CAediting_1409475(20029378, +), CAediting_1409476(20029384, +), CAediting_1409477(20029386, +), CAediting_1409478(20029388, +), CAediting_1409479(20029394, +), CAediting_1409480(20029407, +), CAediting_1409481(20029410, +), CAediting_1409482(20029421, +), CAediting_1409483(20029430, +), CAediting_1409484(20029431, +), CAediting_1409485(20029452, +), CAediting_1409486(20029483, +), CAediting_1409487(20029496, +), CAediting_1409488(20029497, +), CAediting_1409489(20029506, +), CAediting_1409490(20029513, +), CAediting_1409491(20029519, +), CAediting_1409492(20029526, +), CAediting_1409493(20029529, +), CAediting_1409494(20029538, +), CAediting_1409495(20029556, +), CAediting_1409496(20029558, +), CAediting_1409497(20029562, +), CAediting_1409498(20029566, +), CAediting_1409499(20029567, +), CAediting_1409500(20032510, +), CAediting_1409501(20032539, +), CAediting_1409502(20033206, +), CAediting_1409503(20033298, +), CAediting_1409504(20033372, +), |
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RNA editing positional annotations for NAA20 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_1409501 | chr20_20032539_+ | nonsynonymous SNV | ENST00000334982.7 | c.A337G | p.R113G | D | D | D |
CAediting_1409501 | chr20_20032539_+ | nonsynonymous SNV | ENST00000398602.2 | c.A301G | p.R101G | D | D | D |
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CAeditome ID | Position | Variant type |
CAediting_1409409 | chr20_20018357_+ | ncRNA_intronic |
CAediting_1409410 | chr20_20018360_+ | ncRNA_splicing |
CAediting_1409411 | chr20_20018372_+ | ncRNA_exonic |
CAediting_1409412 | chr20_20018377_+ | ncRNA_exonic |
CAediting_1409413 | chr20_20018378_+ | ncRNA_exonic |
CAediting_1409414 | chr20_20018379_+ | ncRNA_exonic |
CAediting_1409415 | chr20_20018380_+ | ncRNA_exonic |
CAediting_1409416 | chr20_20018381_+ | ncRNA_exonic |
CAediting_1409417 | chr20_20018382_+ | ncRNA_exonic |
CAediting_1409418 | chr20_20018383_+ | ncRNA_exonic |
CAediting_1409419 | chr20_20018385_+ | ncRNA_exonic |
CAediting_1409420 | chr20_20018402_+ | ncRNA_exonic |
CAediting_1409421 | chr20_20018403_+ | ncRNA_exonic |
CAediting_1409422 | chr20_20018404_+ | ncRNA_exonic |
CAediting_1409423 | chr20_20018408_+ | ncRNA_exonic |
CAediting_1409424 | chr20_20018414_+ | ncRNA_exonic |
CAediting_1409425 | chr20_20018415_+ | ncRNA_exonic |
CAediting_1409426 | chr20_20018436_+ | ncRNA_exonic |
CAediting_1409427 | chr20_20018439_+ | ncRNA_exonic |
CAediting_1409428 | chr20_20018442_+ | ncRNA_exonic |
CAediting_1409429 | chr20_20018447_+ | ncRNA_exonic |
CAediting_1409430 | chr20_20018448_+ | ncRNA_exonic |
CAediting_1409431 | chr20_20018461_+ | ncRNA_exonic |
CAediting_1409432 | chr20_20018462_+ | ncRNA_exonic |
CAediting_1409433 | chr20_20018474_+ | ncRNA_exonic |
CAediting_1409434 | chr20_20018481_+ | ncRNA_exonic |
CAediting_1409435 | chr20_20018482_+ | ncRNA_exonic |
CAediting_1409436 | chr20_20018483_+ | ncRNA_exonic |
CAediting_1409437 | chr20_20019050_+ | ncRNA_intronic |
CAediting_1409438 | chr20_20019051_+ | ncRNA_intronic |
CAediting_1409439 | chr20_20019076_+ | ncRNA_intronic |
CAediting_1409440 | chr20_20019109_+ | ncRNA_intronic |
CAediting_1409441 | chr20_20019130_+ | ncRNA_intronic |
CAediting_1409442 | chr20_20019151_+ | ncRNA_intronic |
CAediting_1409443 | chr20_20019152_+ | ncRNA_intronic |
CAediting_1409444 | chr20_20019153_+ | ncRNA_intronic |
CAediting_1409445 | chr20_20019154_+ | ncRNA_intronic |
CAediting_1409446 | chr20_20019608_+ | ncRNA_intronic |
CAediting_1409447 | chr20_20020153_+ | ncRNA_intronic |
CAediting_1409448 | chr20_20020154_+ | ncRNA_intronic |
CAediting_1409449 | chr20_20020155_+ | ncRNA_intronic |
CAediting_1409450 | chr20_20020158_+ | ncRNA_intronic |
CAediting_1409451 | chr20_20020165_+ | ncRNA_intronic |
CAediting_1409452 | chr20_20020174_+ | ncRNA_intronic |
CAediting_1409453 | chr20_20020175_+ | ncRNA_intronic |
CAediting_1409454 | chr20_20020177_+ | ncRNA_intronic |
CAediting_1409455 | chr20_20020182_+ | ncRNA_intronic |
CAediting_1409456 | chr20_20020183_+ | ncRNA_intronic |
CAediting_1409457 | chr20_20020205_+ | ncRNA_intronic |
CAediting_1409458 | chr20_20021256_+ | ncRNA_intronic |
CAediting_1409459 | chr20_20021266_+ | ncRNA_intronic |
CAediting_1409460 | chr20_20023082_+ | ncRNA_intronic |
CAediting_1409461 | chr20_20023088_+ | ncRNA_intronic |
CAediting_1409462 | chr20_20023167_+ | ncRNA_intronic |
CAediting_1409463 | chr20_20028973_+ | ncRNA_intronic |
CAediting_1409464 | chr20_20028980_+ | ncRNA_intronic |
CAediting_1409465 | chr20_20028985_+ | ncRNA_intronic |
CAediting_1409466 | chr20_20028994_+ | ncRNA_intronic |
CAediting_1409467 | chr20_20028999_+ | ncRNA_intronic |
CAediting_1409468 | chr20_20029023_+ | ncRNA_intronic |
CAediting_1409469 | chr20_20029068_+ | ncRNA_intronic |
CAediting_1409470 | chr20_20029078_+ | ncRNA_intronic |
CAediting_1409471 | chr20_20029081_+ | ncRNA_intronic |
CAediting_1409472 | chr20_20029342_+ | ncRNA_intronic |
CAediting_1409473 | chr20_20029353_+ | ncRNA_intronic |
CAediting_1409474 | chr20_20029367_+ | ncRNA_intronic |
CAediting_1409475 | chr20_20029378_+ | ncRNA_intronic |
CAediting_1409476 | chr20_20029384_+ | ncRNA_intronic |
CAediting_1409477 | chr20_20029386_+ | ncRNA_intronic |
CAediting_1409478 | chr20_20029388_+ | ncRNA_intronic |
CAediting_1409479 | chr20_20029394_+ | ncRNA_intronic |
CAediting_1409480 | chr20_20029407_+ | ncRNA_intronic |
CAediting_1409481 | chr20_20029410_+ | ncRNA_intronic |
CAediting_1409482 | chr20_20029421_+ | ncRNA_intronic |
CAediting_1409483 | chr20_20029430_+ | ncRNA_intronic |
CAediting_1409484 | chr20_20029431_+ | ncRNA_intronic |
CAediting_1409485 | chr20_20029452_+ | ncRNA_intronic |
CAediting_1409486 | chr20_20029483_+ | ncRNA_intronic |
CAediting_1409487 | chr20_20029496_+ | ncRNA_intronic |
CAediting_1409488 | chr20_20029497_+ | ncRNA_intronic |
CAediting_1409489 | chr20_20029506_+ | ncRNA_intronic |
CAediting_1409490 | chr20_20029513_+ | ncRNA_intronic |
CAediting_1409491 | chr20_20029519_+ | ncRNA_intronic |
CAediting_1409492 | chr20_20029526_+ | ncRNA_intronic |
CAediting_1409493 | chr20_20029529_+ | ncRNA_intronic |
CAediting_1409494 | chr20_20029538_+ | ncRNA_intronic |
CAediting_1409495 | chr20_20029556_+ | ncRNA_intronic |
CAediting_1409496 | chr20_20029558_+ | ncRNA_intronic |
CAediting_1409497 | chr20_20029562_+ | ncRNA_intronic |
CAediting_1409498 | chr20_20029566_+ | ncRNA_intronic |
CAediting_1409499 | chr20_20029567_+ | ncRNA_intronic |
CAediting_1409500 | chr20_20032510_+ | exonic |
CAediting_1409501 | chr20_20032539_+ | exonic |
CAediting_1409502 | chr20_20033206_+ | ncRNA_exonic |
CAediting_1409503 | chr20_20033298_+ | ncRNA_exonic |
CAediting_1409504 | chr20_20033372_+ | ncRNA_exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1409409 | chr20_20018357_+ | LINE | L1 | L1ME2z |
CAediting_1409410 | chr20_20018360_+ | LINE | L1 | L1ME2z |
CAediting_1409411 | chr20_20018372_+ | LINE | L1 | L1ME2z |
CAediting_1409412 | chr20_20018377_+ | LINE | L1 | L1ME2z |
CAediting_1409446 | chr20_20019608_+ | SINE | Alu | AluJo |
CAediting_1409447 | chr20_20020153_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409448 | chr20_20020154_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409449 | chr20_20020155_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409450 | chr20_20020158_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409451 | chr20_20020165_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409452 | chr20_20020174_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409453 | chr20_20020175_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409454 | chr20_20020177_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409455 | chr20_20020182_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409456 | chr20_20020183_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409457 | chr20_20020205_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409458 | chr20_20021256_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409459 | chr20_20021266_+ | DNA | hAT-Charlie | Charlie1b |
CAediting_1409460 | chr20_20023082_+ | SINE | Alu | AluSg |
CAediting_1409461 | chr20_20023088_+ | SINE | Alu | AluSg |
CAediting_1409462 | chr20_20023167_+ | SINE | Alu | AluSg |
CAediting_1409463 | chr20_20028973_+ | SINE | Alu | AluSx1 |
CAediting_1409464 | chr20_20028980_+ | SINE | Alu | AluSx1 |
CAediting_1409465 | chr20_20028985_+ | SINE | Alu | AluSx1 |
CAediting_1409466 | chr20_20028994_+ | SINE | Alu | AluSx1 |
CAediting_1409467 | chr20_20028999_+ | SINE | Alu | AluSx1 |
CAediting_1409468 | chr20_20029023_+ | SINE | Alu | AluSx1 |
CAediting_1409469 | chr20_20029068_+ | SINE | Alu | AluSx1 |
CAediting_1409470 | chr20_20029078_+ | SINE | Alu | AluSx1 |
CAediting_1409471 | chr20_20029081_+ | SINE | Alu | AluSx1 |
CAediting_1409472 | chr20_20029342_+ | SINE | Alu | AluSz |
CAediting_1409473 | chr20_20029353_+ | SINE | Alu | AluSz |
CAediting_1409474 | chr20_20029367_+ | SINE | Alu | AluSz |
CAediting_1409475 | chr20_20029378_+ | SINE | Alu | AluSz |
CAediting_1409476 | chr20_20029384_+ | SINE | Alu | AluSz |
CAediting_1409477 | chr20_20029386_+ | SINE | Alu | AluSz |
CAediting_1409478 | chr20_20029388_+ | SINE | Alu | AluSz |
CAediting_1409479 | chr20_20029394_+ | SINE | Alu | AluSz |
CAediting_1409480 | chr20_20029407_+ | SINE | Alu | AluSz |
CAediting_1409481 | chr20_20029410_+ | SINE | Alu | AluSz |
CAediting_1409482 | chr20_20029421_+ | SINE | Alu | AluSz |
CAediting_1409483 | chr20_20029430_+ | SINE | Alu | AluSz |
CAediting_1409484 | chr20_20029431_+ | SINE | Alu | AluSz |
CAediting_1409485 | chr20_20029452_+ | SINE | Alu | AluSz |
CAediting_1409486 | chr20_20029483_+ | SINE | Alu | AluSz |
CAediting_1409487 | chr20_20029496_+ | SINE | Alu | AluSz |
CAediting_1409488 | chr20_20029497_+ | SINE | Alu | AluSz |
CAediting_1409489 | chr20_20029506_+ | SINE | Alu | AluSz |
CAediting_1409490 | chr20_20029513_+ | SINE | Alu | AluSz |
CAediting_1409491 | chr20_20029519_+ | SINE | Alu | AluSz |
CAediting_1409492 | chr20_20029526_+ | SINE | Alu | AluSz |
CAediting_1409493 | chr20_20029529_+ | SINE | Alu | AluSz |
CAediting_1409494 | chr20_20029538_+ | SINE | Alu | AluSz |
CAediting_1409495 | chr20_20029556_+ | SINE | Alu | AluSz |
CAediting_1409496 | chr20_20029558_+ | SINE | Alu | AluSz |
CAediting_1409497 | chr20_20029562_+ | SINE | Alu | AluSz |
CAediting_1409498 | chr20_20029566_+ | SINE | Alu | AluSz |
CAediting_1409499 | chr20_20029567_+ | SINE | Alu | AluSz |
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RNA A-to-I editing events in the alternative splicing sites for NAA20 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
ES | CAediting_1409409 | chr20_20018357_+ | 20018341:20018363 | 3SS | 0+4i | TCCTTCCTTCCCATCTATCAGTC | -5.15 | TCCTTCCTTCCCATCTGTCAGTC | -5.28 |
ES | CAediting_1409410 | chr20_20018360_+ | 20018341:20018363 | 3SS | 0+1i | TCCTTCCTTCCCATCTATCAGTC | -5.15 | TCCTTCCTTCCCATCTATCGGTC | 3.6 |
ES | CAediting_1409500 | chr20_20032510_+ | 20032491:20032513 | 3SS | 0+1i | TTGTTTTTCTTTTAAAGAAAGGG | -7.14 | TTGTTTTTCTTTTAAAGAAGGGG | 1.61 |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NAA20 |
![]() * The grey color means N/A. |
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ESCA.CAediting_1409467.ENSG00000173418.NAA20.png ![]() |
ESCA.CAediting_1409495.ENSG00000173418.NAA20.png ![]() |
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Protein coding region RNA A-to-I editings for NAA20 |
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The effects of the RNA editing to the miRNA binding sites for NAA20 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1409504 | chr20_20033372_+ | ENSG00000173418.10 | ENST00000310450 | hsa-miR-6826-5p | 20033365 | 20033372 | 8mer-1a | 20033350 | 20033372 | 154.00 | -14.84 |
CAediting_1409504 | chr20_20033372_+ | ENSG00000173418.10 | ENST00000398602 | hsa-miR-6826-5p | 20033365 | 20033372 | 8mer-1a | 20033350 | 20033372 | 154.00 | -14.84 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_468389 | chr6_31355314_- | ENSG00000173418.10 | ENST00000310450 | hsa-miR-6891-5p | 20033489 | 20033494 | 6mer | 20033480 | 20033498 | 157 | -27.72 |
CAediting_468389 | chr6_31355314_- | ENSG00000173418.10 | ENST00000310450 | hsa-miR-6891-5p | 20033491 | 20033498 | 8mer-1a | 20033480 | 20033498 | 157 | -27.72 |
CAediting_468389 | chr6_31355314_- | ENSG00000173418.10 | ENST00000398602 | hsa-miR-6891-5p | 20033489 | 20033494 | 6mer | 20033480 | 20033498 | 157 | -27.72 |
CAediting_468389 | chr6_31355314_- | ENSG00000173418.10 | ENST00000398602 | hsa-miR-6891-5p | 20033491 | 20033498 | 8mer-1a | 20033480 | 20033498 | 157 | -27.72 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for NAA20 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for NAA20 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
BRCA | CAediting_1409431 | chr20_20018461_+ | 0.0300146049285501 | 0.245877079966775 | . | . | . | . |
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Relation with cancer stages for NAA20 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BRCA | pathologic_stage | CAediting_1409431 | chr20_20018461_+ | 0.027019299166329 | 0.250412787501553 |
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Relation with survival for NAA20 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for NAA20 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for NAA20 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |