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Editing gene: POLR1D (CAeditome ID:51082)

Gene summary for POLR1D

Gene summary

Gene information	Gene symbol	POLR1D
	Gene ID	51082
	Gene name	RNA polymerase I and III subunit D
	Synonyms	AC19\|POLR1C\|RPA16\|RPA9\|RPAC2\|RPC16\|RPO1-3\|TCS2
	Cytomap	13q12.2
	Type of gene	protein-coding
	Description	DNA-directed RNA polymerases I and III subunit RPAC2Protein POLR1DDNA-directed RNA polymerase I subunit DRNA polymerase I subunit DRNA polymerases I and III subunit AC2polymerase (RNA) I polypeptide D, 16kDapolymerase (RNA) I subunit D
	Modification date	20210518
	UniProtAcc	P0DPB6,P0DPB5
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for POLR1D

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000186184.14

RNA A-to-I editing events in Cancer.

CAediting_954434(27620924, +), CAediting_954435(27620952, +), CAediting_954436(27620953, +), CAediting_954437(27620957, +), CAediting_954438(27624767, +), CAediting_954439(27636560, +), CAediting_954440(27636569, +), CAediting_954441(27636587, +), CAediting_954442(27636602, +), CAediting_954443(27641145, +), CAediting_954444(27641183, +), CAediting_954445(27641235, +), CAediting_954446(27641281, +), CAediting_954447(27651629, +), CAediting_954448(27651630, +), CAediting_954449(27651631, +), CAediting_954450(27651636, +), CAediting_954451(27651642, +), CAediting_954452(27651644, +), CAediting_954453(27651645, +), CAediting_954454(27651646, +), CAediting_954455(27651647, +), CAediting_954456(27651648, +), CAediting_954457(27651660, +), CAediting_954458(27651661, +), CAediting_954459(27651670, +), CAediting_954460(27651674, +), CAediting_954461(27651676, +), CAediting_954462(27651679, +), CAediting_954463(27651680, +), CAediting_954464(27651682, +), CAediting_954465(27651684, +), CAediting_954466(27651688, +), CAediting_954467(27651695, +), CAediting_954468(27651697, +), CAediting_954469(27651698, +), CAediting_954470(27651699, +), CAediting_954471(27651701, +), CAediting_954472(27651702, +), CAediting_954473(27651703, +), CAediting_954474(27651704, +), CAediting_954475(27651742, +), CAediting_954476(27651749, +), CAediting_954477(27651752, +), CAediting_954478(27651757, +), CAediting_954479(27651758, +), CAediting_954480(27651766, +), CAediting_954481(27651767, +), CAediting_954482(27651773, +), CAediting_954483(27651775, +), CAediting_954484(27651776, +), CAediting_954485(27651779, +), CAediting_954486(27651785, +), CAediting_954487(27651788, +), CAediting_954488(27651792, +), CAediting_954489(27651793, +), CAediting_954490(27651798, +), CAediting_954491(27651801, +), CAediting_954492(27651802, +), CAediting_954493(27651803, +), CAediting_954494(27651805, +), CAediting_954495(27651806, +), CAediting_954496(27651814, +), CAediting_954497(27651820, +), CAediting_954498(27651821, +), CAediting_954499(27651824, +), CAediting_954500(27651832, +), CAediting_954501(27651834, +), CAediting_954502(27652114, +), CAediting_954503(27652131, +), CAediting_954504(27652135, +), CAediting_954505(27652136, +), CAediting_954506(27652137, +), CAediting_954507(27652138, +), CAediting_954508(27652141, +), CAediting_954509(27652150, +), CAediting_954510(27652152, +), CAediting_954511(27652153, +), CAediting_954512(27652157, +), CAediting_954513(27652160, +), CAediting_954514(27652164, +), CAediting_954515(27652165, +), CAediting_954516(27652171, +), CAediting_954517(27652172, +), CAediting_954518(27652175, +), CAediting_954519(27652177, +), CAediting_954520(27652191, +), CAediting_954521(27652202, +), CAediting_954522(27652203, +), CAediting_954523(27652225, +), CAediting_954524(27652233, +), CAediting_954525(27652235, +), CAediting_954526(27652237, +), CAediting_954527(27652239, +), CAediting_954528(27652241, +), CAediting_954529(27652244, +), CAediting_954530(27652248, +), CAediting_954531(27652254, +), CAediting_954532(27652256, +), CAediting_954533(27652262, +), CAediting_954534(27652265, +), CAediting_954535(27652268, +), CAediting_954536(27652281, +), CAediting_954537(27652283, +), CAediting_954538(27652305, +), CAediting_954539(27652308, +), CAediting_954540(27652322, +), CAediting_954541(27652590, +), CAediting_954542(27652607, +), CAediting_954543(27652613, +), CAediting_954544(27652616, +), CAediting_954545(27652621, +), CAediting_954546(27652651, +), CAediting_954547(27652663, +), CAediting_954548(27652669, +), CAediting_954549(27652671, +), CAediting_954550(27652674, +), CAediting_954551(27652699, +), CAediting_954552(27652708, +), CAediting_954553(27652709, +), CAediting_954554(27652710, +), CAediting_954555(27652711, +), CAediting_954556(27652712, +), CAediting_954557(27652714, +), CAediting_954558(27652717, +), CAediting_954559(27652718, +), CAediting_954560(27652719, +), CAediting_954561(27652720, +), CAediting_954562(27652723, +), CAediting_954563(27652727, +), CAediting_954564(27652749, +), CAediting_954565(27652750, +), CAediting_954566(27652755, +), CAediting_954567(27652759, +), CAediting_954568(27652763, +), CAediting_954569(27652769, +), CAediting_954570(27652773, +), CAediting_954571(27652778, +), CAediting_954572(27652782, +), CAediting_954573(27652787, +), CAediting_954574(27652795, +), CAediting_954575(27652797, +), CAediting_954576(27652801, +), CAediting_954577(27652806, +), CAediting_954578(27652811, +), CAediting_954579(27652812, +), CAediting_954580(27652862, +), CAediting_954581(27652874, +), CAediting_954582(27652878, +), CAediting_954583(27652879, +), CAediting_954584(27652969, +), CAediting_954585(27652974, +), CAediting_954586(27652979, +), CAediting_954587(27652980, +), CAediting_954588(27653000, +), CAediting_954589(27653003, +), CAediting_954590(27653038, +), CAediting_954591(27653040, +), CAediting_954592(27653064, +), CAediting_954593(27653065, +), CAediting_954594(27653073, +), CAediting_954595(27653083, +), CAediting_954596(27653086, +), CAediting_954597(27653088, +), CAediting_954598(27653100, +), CAediting_954599(27653112, +), CAediting_954600(27653132, +), CAediting_954601(27653136, +), CAediting_954602(27653140, +), CAediting_954603(27653160, +), CAediting_954604(27653162, +), CAediting_954605(27653168, +), CAediting_954606(27653171, +), CAediting_954607(27653176, +), CAediting_954608(27653505, +), CAediting_954609(27653514, +), CAediting_954610(27653516, +), CAediting_954611(27653520, +), CAediting_954612(27653523, +), CAediting_954613(27653542, +), CAediting_954614(27653550, +), CAediting_954615(27653567, +), CAediting_954616(27653569, +), CAediting_954617(27653579, +), CAediting_954618(27653580, +), CAediting_954619(27653581, +), CAediting_954620(27653588, +), CAediting_954621(27653610, +), CAediting_954622(27653614, +), CAediting_954623(27653616, +), CAediting_954624(27653617, +), CAediting_954625(27653622, +), CAediting_954626(27653623, +), CAediting_954627(27653624, +), CAediting_954628(27653626, +), CAediting_954629(27653637, +), CAediting_954630(27653646, +), CAediting_954631(27653648, +), CAediting_954632(27653655, +), CAediting_954633(27653656, +), CAediting_954634(27653658, +), CAediting_954635(27653661, +), CAediting_954636(27653662, +), CAediting_954637(27653669, +), CAediting_954638(27653670, +), CAediting_954639(27653671, +), CAediting_954640(27653674, +), CAediting_954641(27653675, +), CAediting_954642(27653676, +), CAediting_954643(27653713, +), CAediting_954644(27653716, +), CAediting_954645(27653717, +), CAediting_954646(27653904, +), CAediting_954647(27653907, +), CAediting_954648(27653915, +), CAediting_954649(27653923, +), CAediting_954650(27653927, +), CAediting_954651(27653941, +), CAediting_954652(27653943, +), CAediting_954653(27653947, +), CAediting_954654(27653950, +), CAediting_954655(27653952, +), CAediting_954656(27653953, +), CAediting_954657(27653954, +), CAediting_954658(27653959, +), CAediting_954659(27653960, +), CAediting_954660(27653962, +), CAediting_954661(27653963, +), CAediting_954662(27653964, +), CAediting_954663(27653978, +), CAediting_954664(27653982, +), CAediting_954665(27653983, +), CAediting_954666(27653990, +), CAediting_954667(27653993, +), CAediting_954668(27653997, +), CAediting_954669(27654012, +), CAediting_954670(27654014, +), CAediting_954671(27654021, +), CAediting_954672(27654022, +), CAediting_954673(27654024, +), CAediting_954674(27654025, +), CAediting_954675(27654026, +), CAediting_954676(27654028, +), CAediting_954677(27654029, +), CAediting_954678(27654032, +), CAediting_954679(27654042, +), CAediting_954680(27654056, +), CAediting_954681(27654059, +), CAediting_954682(27654060, +), CAediting_954683(27654062, +), CAediting_954684(27654069, +), CAediting_954685(27654073, +), CAediting_954686(27654075, +), CAediting_954687(27654083, +), CAediting_954688(27654087, +), CAediting_954689(27654093, +), CAediting_954690(27654094, +), CAediting_954691(27654095, +), CAediting_954692(27654108, +), CAediting_954693(27658088, +),

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RNA editing positional annotations for POLR1D using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_954434	chr13_27620924_+	ncRNA_exonic
CAediting_954435	chr13_27620952_+	ncRNA_exonic
CAediting_954436	chr13_27620953_+	ncRNA_exonic
CAediting_954437	chr13_27620957_+	ncRNA_exonic
CAediting_954438	chr13_27624767_+	intronic
CAediting_954439	chr13_27636560_+	intronic
CAediting_954440	chr13_27636569_+	intronic
CAediting_954441	chr13_27636587_+	intronic
CAediting_954442	chr13_27636602_+	intronic
CAediting_954443	chr13_27641145_+	intronic
CAediting_954444	chr13_27641183_+	intronic
CAediting_954445	chr13_27641235_+	intronic
CAediting_954446	chr13_27641281_+	intronic
CAediting_954447	chr13_27651629_+	ncRNA_intronic
CAediting_954448	chr13_27651630_+	ncRNA_intronic
CAediting_954449	chr13_27651631_+	ncRNA_intronic
CAediting_954450	chr13_27651636_+	ncRNA_intronic
CAediting_954451	chr13_27651642_+	ncRNA_intronic
CAediting_954452	chr13_27651644_+	ncRNA_intronic
CAediting_954453	chr13_27651645_+	ncRNA_intronic
CAediting_954454	chr13_27651646_+	ncRNA_intronic
CAediting_954455	chr13_27651647_+	ncRNA_intronic
CAediting_954456	chr13_27651648_+	ncRNA_intronic
CAediting_954457	chr13_27651660_+	ncRNA_intronic
CAediting_954458	chr13_27651661_+	ncRNA_intronic
CAediting_954459	chr13_27651670_+	ncRNA_intronic
CAediting_954460	chr13_27651674_+	ncRNA_intronic
CAediting_954461	chr13_27651676_+	ncRNA_intronic
CAediting_954462	chr13_27651679_+	ncRNA_intronic
CAediting_954463	chr13_27651680_+	ncRNA_intronic
CAediting_954464	chr13_27651682_+	ncRNA_intronic
CAediting_954465	chr13_27651684_+	ncRNA_intronic
CAediting_954466	chr13_27651688_+	ncRNA_intronic
CAediting_954467	chr13_27651695_+	ncRNA_intronic
CAediting_954468	chr13_27651697_+	ncRNA_intronic
CAediting_954469	chr13_27651698_+	ncRNA_intronic
CAediting_954470	chr13_27651699_+	ncRNA_intronic
CAediting_954471	chr13_27651701_+	ncRNA_intronic
CAediting_954472	chr13_27651702_+	ncRNA_intronic
CAediting_954473	chr13_27651703_+	ncRNA_intronic
CAediting_954474	chr13_27651704_+	ncRNA_intronic
CAediting_954475	chr13_27651742_+	ncRNA_intronic
CAediting_954476	chr13_27651749_+	ncRNA_intronic
CAediting_954477	chr13_27651752_+	ncRNA_intronic
CAediting_954478	chr13_27651757_+	ncRNA_intronic
CAediting_954479	chr13_27651758_+	ncRNA_intronic
CAediting_954480	chr13_27651766_+	ncRNA_intronic
CAediting_954481	chr13_27651767_+	ncRNA_intronic
CAediting_954482	chr13_27651773_+	ncRNA_intronic
CAediting_954483	chr13_27651775_+	ncRNA_intronic
CAediting_954484	chr13_27651776_+	ncRNA_intronic
CAediting_954485	chr13_27651779_+	ncRNA_intronic
CAediting_954486	chr13_27651785_+	ncRNA_intronic
CAediting_954487	chr13_27651788_+	ncRNA_intronic
CAediting_954488	chr13_27651792_+	ncRNA_intronic
CAediting_954489	chr13_27651793_+	ncRNA_intronic
CAediting_954490	chr13_27651798_+	ncRNA_intronic
CAediting_954491	chr13_27651801_+	ncRNA_intronic
CAediting_954492	chr13_27651802_+	ncRNA_intronic
CAediting_954493	chr13_27651803_+	ncRNA_intronic
CAediting_954494	chr13_27651805_+	ncRNA_intronic
CAediting_954495	chr13_27651806_+	ncRNA_intronic
CAediting_954496	chr13_27651814_+	ncRNA_intronic
CAediting_954497	chr13_27651820_+	ncRNA_intronic
CAediting_954498	chr13_27651821_+	ncRNA_intronic
CAediting_954499	chr13_27651824_+	ncRNA_intronic
CAediting_954500	chr13_27651832_+	ncRNA_intronic
CAediting_954501	chr13_27651834_+	ncRNA_intronic
CAediting_954502	chr13_27652114_+	ncRNA_intronic
CAediting_954503	chr13_27652131_+	ncRNA_intronic
CAediting_954504	chr13_27652135_+	ncRNA_intronic
CAediting_954505	chr13_27652136_+	ncRNA_intronic
CAediting_954506	chr13_27652137_+	ncRNA_intronic
CAediting_954507	chr13_27652138_+	ncRNA_intronic
CAediting_954508	chr13_27652141_+	ncRNA_intronic
CAediting_954509	chr13_27652150_+	ncRNA_intronic
CAediting_954510	chr13_27652152_+	ncRNA_intronic
CAediting_954511	chr13_27652153_+	ncRNA_intronic
CAediting_954512	chr13_27652157_+	ncRNA_intronic
CAediting_954513	chr13_27652160_+	ncRNA_intronic
CAediting_954514	chr13_27652164_+	ncRNA_intronic
CAediting_954515	chr13_27652165_+	ncRNA_intronic
CAediting_954516	chr13_27652171_+	ncRNA_intronic
CAediting_954517	chr13_27652172_+	ncRNA_intronic
CAediting_954518	chr13_27652175_+	ncRNA_intronic
CAediting_954519	chr13_27652177_+	ncRNA_intronic
CAediting_954520	chr13_27652191_+	ncRNA_intronic
CAediting_954521	chr13_27652202_+	ncRNA_intronic
CAediting_954522	chr13_27652203_+	ncRNA_intronic
CAediting_954523	chr13_27652225_+	ncRNA_intronic
CAediting_954524	chr13_27652233_+	ncRNA_intronic
CAediting_954525	chr13_27652235_+	ncRNA_intronic
CAediting_954526	chr13_27652237_+	ncRNA_intronic
CAediting_954527	chr13_27652239_+	ncRNA_intronic
CAediting_954528	chr13_27652241_+	ncRNA_intronic
CAediting_954529	chr13_27652244_+	ncRNA_intronic
CAediting_954530	chr13_27652248_+	ncRNA_intronic
CAediting_954531	chr13_27652254_+	ncRNA_intronic
CAediting_954532	chr13_27652256_+	ncRNA_intronic
CAediting_954533	chr13_27652262_+	ncRNA_intronic
CAediting_954534	chr13_27652265_+	ncRNA_intronic
CAediting_954535	chr13_27652268_+	ncRNA_intronic
CAediting_954536	chr13_27652281_+	ncRNA_intronic
CAediting_954537	chr13_27652283_+	ncRNA_intronic
CAediting_954538	chr13_27652305_+	ncRNA_intronic
CAediting_954539	chr13_27652308_+	ncRNA_intronic
CAediting_954540	chr13_27652322_+	ncRNA_intronic
CAediting_954541	chr13_27652590_+	ncRNA_intronic
CAediting_954542	chr13_27652607_+	ncRNA_intronic
CAediting_954543	chr13_27652613_+	ncRNA_intronic
CAediting_954544	chr13_27652616_+	ncRNA_intronic
CAediting_954545	chr13_27652621_+	ncRNA_intronic
CAediting_954546	chr13_27652651_+	ncRNA_intronic
CAediting_954547	chr13_27652663_+	ncRNA_intronic
CAediting_954548	chr13_27652669_+	ncRNA_intronic
CAediting_954549	chr13_27652671_+	ncRNA_intronic
CAediting_954550	chr13_27652674_+	ncRNA_intronic
CAediting_954551	chr13_27652699_+	ncRNA_intronic
CAediting_954552	chr13_27652708_+	ncRNA_intronic
CAediting_954553	chr13_27652709_+	ncRNA_intronic
CAediting_954554	chr13_27652710_+	ncRNA_intronic
CAediting_954555	chr13_27652711_+	ncRNA_intronic
CAediting_954556	chr13_27652712_+	ncRNA_intronic
CAediting_954557	chr13_27652714_+	ncRNA_intronic
CAediting_954558	chr13_27652717_+	ncRNA_intronic
CAediting_954559	chr13_27652718_+	ncRNA_intronic
CAediting_954560	chr13_27652719_+	ncRNA_intronic
CAediting_954561	chr13_27652720_+	ncRNA_intronic
CAediting_954562	chr13_27652723_+	ncRNA_intronic
CAediting_954563	chr13_27652727_+	ncRNA_intronic
CAediting_954564	chr13_27652749_+	ncRNA_intronic
CAediting_954565	chr13_27652750_+	ncRNA_intronic
CAediting_954566	chr13_27652755_+	ncRNA_intronic
CAediting_954567	chr13_27652759_+	ncRNA_intronic
CAediting_954568	chr13_27652763_+	ncRNA_intronic
CAediting_954569	chr13_27652769_+	ncRNA_intronic
CAediting_954570	chr13_27652773_+	ncRNA_intronic
CAediting_954571	chr13_27652778_+	ncRNA_intronic
CAediting_954572	chr13_27652782_+	ncRNA_intronic
CAediting_954573	chr13_27652787_+	ncRNA_intronic
CAediting_954574	chr13_27652795_+	ncRNA_intronic
CAediting_954575	chr13_27652797_+	ncRNA_intronic
CAediting_954576	chr13_27652801_+	ncRNA_intronic
CAediting_954577	chr13_27652806_+	ncRNA_intronic
CAediting_954578	chr13_27652811_+	ncRNA_intronic
CAediting_954579	chr13_27652812_+	ncRNA_intronic
CAediting_954580	chr13_27652862_+	ncRNA_intronic
CAediting_954581	chr13_27652874_+	ncRNA_intronic
CAediting_954582	chr13_27652878_+	ncRNA_intronic
CAediting_954583	chr13_27652879_+	ncRNA_intronic
CAediting_954584	chr13_27652969_+	ncRNA_intronic
CAediting_954585	chr13_27652974_+	ncRNA_intronic
CAediting_954586	chr13_27652979_+	ncRNA_intronic
CAediting_954587	chr13_27652980_+	ncRNA_intronic
CAediting_954588	chr13_27653000_+	ncRNA_intronic
CAediting_954589	chr13_27653003_+	ncRNA_intronic
CAediting_954590	chr13_27653038_+	ncRNA_intronic
CAediting_954591	chr13_27653040_+	ncRNA_intronic
CAediting_954592	chr13_27653064_+	ncRNA_intronic
CAediting_954593	chr13_27653065_+	ncRNA_intronic
CAediting_954594	chr13_27653073_+	ncRNA_intronic
CAediting_954595	chr13_27653083_+	ncRNA_intronic
CAediting_954596	chr13_27653086_+	ncRNA_intronic
CAediting_954597	chr13_27653088_+	ncRNA_intronic
CAediting_954598	chr13_27653100_+	ncRNA_intronic
CAediting_954599	chr13_27653112_+	ncRNA_intronic
CAediting_954600	chr13_27653132_+	ncRNA_intronic
CAediting_954601	chr13_27653136_+	ncRNA_intronic
CAediting_954602	chr13_27653140_+	ncRNA_intronic
CAediting_954603	chr13_27653160_+	ncRNA_intronic
CAediting_954604	chr13_27653162_+	ncRNA_intronic
CAediting_954605	chr13_27653168_+	ncRNA_intronic
CAediting_954606	chr13_27653171_+	ncRNA_intronic
CAediting_954607	chr13_27653176_+	ncRNA_intronic
CAediting_954608	chr13_27653505_+	ncRNA_intronic
CAediting_954609	chr13_27653514_+	ncRNA_intronic
CAediting_954610	chr13_27653516_+	ncRNA_intronic
CAediting_954611	chr13_27653520_+	ncRNA_intronic
CAediting_954612	chr13_27653523_+	ncRNA_intronic
CAediting_954613	chr13_27653542_+	ncRNA_intronic
CAediting_954614	chr13_27653550_+	ncRNA_intronic
CAediting_954615	chr13_27653567_+	ncRNA_intronic
CAediting_954616	chr13_27653569_+	ncRNA_intronic
CAediting_954617	chr13_27653579_+	ncRNA_intronic
CAediting_954618	chr13_27653580_+	ncRNA_intronic
CAediting_954619	chr13_27653581_+	ncRNA_intronic
CAediting_954620	chr13_27653588_+	ncRNA_intronic
CAediting_954621	chr13_27653610_+	ncRNA_intronic
CAediting_954622	chr13_27653614_+	ncRNA_intronic
CAediting_954623	chr13_27653616_+	ncRNA_intronic
CAediting_954624	chr13_27653617_+	ncRNA_intronic
CAediting_954625	chr13_27653622_+	ncRNA_intronic
CAediting_954626	chr13_27653623_+	ncRNA_intronic
CAediting_954627	chr13_27653624_+	ncRNA_intronic
CAediting_954628	chr13_27653626_+	ncRNA_intronic
CAediting_954629	chr13_27653637_+	ncRNA_intronic
CAediting_954630	chr13_27653646_+	ncRNA_intronic
CAediting_954631	chr13_27653648_+	ncRNA_intronic
CAediting_954632	chr13_27653655_+	ncRNA_intronic
CAediting_954633	chr13_27653656_+	ncRNA_intronic
CAediting_954634	chr13_27653658_+	ncRNA_intronic
CAediting_954635	chr13_27653661_+	ncRNA_intronic
CAediting_954636	chr13_27653662_+	ncRNA_intronic
CAediting_954637	chr13_27653669_+	ncRNA_intronic
CAediting_954638	chr13_27653670_+	ncRNA_intronic
CAediting_954639	chr13_27653671_+	ncRNA_intronic
CAediting_954640	chr13_27653674_+	ncRNA_intronic
CAediting_954641	chr13_27653675_+	ncRNA_intronic
CAediting_954642	chr13_27653676_+	ncRNA_intronic
CAediting_954643	chr13_27653713_+	ncRNA_intronic
CAediting_954644	chr13_27653716_+	ncRNA_intronic
CAediting_954645	chr13_27653717_+	ncRNA_intronic
CAediting_954646	chr13_27653904_+	ncRNA_intronic
CAediting_954647	chr13_27653907_+	ncRNA_intronic
CAediting_954648	chr13_27653915_+	ncRNA_intronic
CAediting_954649	chr13_27653923_+	ncRNA_intronic
CAediting_954650	chr13_27653927_+	ncRNA_intronic
CAediting_954651	chr13_27653941_+	ncRNA_intronic
CAediting_954652	chr13_27653943_+	ncRNA_intronic
CAediting_954653	chr13_27653947_+	ncRNA_intronic
CAediting_954654	chr13_27653950_+	ncRNA_intronic
CAediting_954655	chr13_27653952_+	ncRNA_intronic
CAediting_954656	chr13_27653953_+	ncRNA_intronic
CAediting_954657	chr13_27653954_+	ncRNA_intronic
CAediting_954658	chr13_27653959_+	ncRNA_intronic
CAediting_954659	chr13_27653960_+	ncRNA_intronic
CAediting_954660	chr13_27653962_+	ncRNA_intronic
CAediting_954661	chr13_27653963_+	ncRNA_intronic
CAediting_954662	chr13_27653964_+	ncRNA_intronic
CAediting_954663	chr13_27653978_+	ncRNA_intronic
CAediting_954664	chr13_27653982_+	ncRNA_intronic
CAediting_954665	chr13_27653983_+	ncRNA_intronic
CAediting_954666	chr13_27653990_+	ncRNA_intronic
CAediting_954667	chr13_27653993_+	ncRNA_intronic
CAediting_954668	chr13_27653997_+	ncRNA_intronic
CAediting_954669	chr13_27654012_+	ncRNA_intronic
CAediting_954670	chr13_27654014_+	ncRNA_intronic
CAediting_954671	chr13_27654021_+	ncRNA_intronic
CAediting_954672	chr13_27654022_+	ncRNA_intronic
CAediting_954673	chr13_27654024_+	ncRNA_intronic
CAediting_954674	chr13_27654025_+	ncRNA_intronic
CAediting_954675	chr13_27654026_+	ncRNA_intronic
CAediting_954676	chr13_27654028_+	ncRNA_intronic
CAediting_954677	chr13_27654029_+	ncRNA_intronic
CAediting_954678	chr13_27654032_+	ncRNA_intronic
CAediting_954679	chr13_27654042_+	ncRNA_intronic
CAediting_954680	chr13_27654056_+	ncRNA_intronic
CAediting_954681	chr13_27654059_+	ncRNA_intronic
CAediting_954682	chr13_27654060_+	ncRNA_intronic
CAediting_954683	chr13_27654062_+	ncRNA_intronic
CAediting_954684	chr13_27654069_+	ncRNA_intronic
CAediting_954685	chr13_27654073_+	ncRNA_intronic
CAediting_954686	chr13_27654075_+	ncRNA_intronic
CAediting_954687	chr13_27654083_+	ncRNA_intronic
CAediting_954688	chr13_27654087_+	ncRNA_intronic
CAediting_954689	chr13_27654093_+	ncRNA_intronic
CAediting_954690	chr13_27654094_+	ncRNA_intronic
CAediting_954691	chr13_27654095_+	ncRNA_intronic
CAediting_954692	chr13_27654108_+	ncRNA_intronic
CAediting_954693	chr13_27658088_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_954438	chr13_27624767_+	SINE	Alu	AluJb
CAediting_954443	chr13_27641145_+	SINE	5S-Deu-L2	AmnSINE1
CAediting_954444	chr13_27641183_+	SINE	5S-Deu-L2	AmnSINE1
CAediting_954445	chr13_27641235_+	SINE	5S-Deu-L2	AmnSINE1
CAediting_954446	chr13_27641281_+	SINE	5S-Deu-L2	AmnSINE1
CAediting_954447	chr13_27651629_+	DNA	hAT-Charlie	Charlie1a
CAediting_954448	chr13_27651630_+	DNA	hAT-Charlie	Charlie1a
CAediting_954449	chr13_27651631_+	DNA	hAT-Charlie	Charlie1a
CAediting_954450	chr13_27651636_+	DNA	hAT-Charlie	Charlie1a
CAediting_954451	chr13_27651642_+	DNA	hAT-Charlie	Charlie1a
CAediting_954452	chr13_27651644_+	DNA	hAT-Charlie	Charlie1a
CAediting_954453	chr13_27651645_+	DNA	hAT-Charlie	Charlie1a
CAediting_954454	chr13_27651646_+	DNA	hAT-Charlie	Charlie1a
CAediting_954455	chr13_27651647_+	DNA	hAT-Charlie	Charlie1a
CAediting_954456	chr13_27651648_+	DNA	hAT-Charlie	Charlie1a
CAediting_954457	chr13_27651660_+	DNA	hAT-Charlie	Charlie1a
CAediting_954458	chr13_27651661_+	DNA	hAT-Charlie	Charlie1a
CAediting_954459	chr13_27651670_+	DNA	hAT-Charlie	Charlie1a
CAediting_954460	chr13_27651674_+	DNA	hAT-Charlie	Charlie1a
CAediting_954461	chr13_27651676_+	DNA	hAT-Charlie	Charlie1a
CAediting_954462	chr13_27651679_+	DNA	hAT-Charlie	Charlie1a
CAediting_954463	chr13_27651680_+	DNA	hAT-Charlie	Charlie1a
CAediting_954464	chr13_27651682_+	DNA	hAT-Charlie	Charlie1a
CAediting_954465	chr13_27651684_+	DNA	hAT-Charlie	Charlie1a
CAediting_954466	chr13_27651688_+	DNA	hAT-Charlie	Charlie1a
CAediting_954467	chr13_27651695_+	DNA	hAT-Charlie	Charlie1a
CAediting_954468	chr13_27651697_+	DNA	hAT-Charlie	Charlie1a
CAediting_954469	chr13_27651698_+	DNA	hAT-Charlie	Charlie1a
CAediting_954470	chr13_27651699_+	DNA	hAT-Charlie	Charlie1a
CAediting_954471	chr13_27651701_+	DNA	hAT-Charlie	Charlie1a
CAediting_954472	chr13_27651702_+	DNA	hAT-Charlie	Charlie1a
CAediting_954473	chr13_27651703_+	DNA	hAT-Charlie	Charlie1a
CAediting_954474	chr13_27651704_+	DNA	hAT-Charlie	Charlie1a
CAediting_954475	chr13_27651742_+	DNA	hAT-Charlie	Charlie1a
CAediting_954476	chr13_27651749_+	DNA	hAT-Charlie	Charlie1a
CAediting_954477	chr13_27651752_+	DNA	hAT-Charlie	Charlie1a
CAediting_954478	chr13_27651757_+	DNA	hAT-Charlie	Charlie1a
CAediting_954479	chr13_27651758_+	DNA	hAT-Charlie	Charlie1a
CAediting_954480	chr13_27651766_+	DNA	hAT-Charlie	Charlie1a
CAediting_954481	chr13_27651767_+	DNA	hAT-Charlie	Charlie1a
CAediting_954482	chr13_27651773_+	DNA	hAT-Charlie	Charlie1a
CAediting_954483	chr13_27651775_+	DNA	hAT-Charlie	Charlie1a
CAediting_954484	chr13_27651776_+	DNA	hAT-Charlie	Charlie1a
CAediting_954485	chr13_27651779_+	DNA	hAT-Charlie	Charlie1a
CAediting_954541	chr13_27652590_+	SINE	Alu	AluSz
CAediting_954542	chr13_27652607_+	SINE	Alu	AluSz
CAediting_954543	chr13_27652613_+	SINE	Alu	AluSz
CAediting_954544	chr13_27652616_+	SINE	Alu	AluSz
CAediting_954545	chr13_27652621_+	SINE	Alu	AluSz
CAediting_954546	chr13_27652651_+	SINE	Alu	AluSz
CAediting_954547	chr13_27652663_+	SINE	Alu	AluSz
CAediting_954548	chr13_27652669_+	SINE	Alu	AluSz
CAediting_954549	chr13_27652671_+	SINE	Alu	AluSz
CAediting_954550	chr13_27652674_+	SINE	Alu	AluSz
CAediting_954551	chr13_27652699_+	SINE	Alu	AluSz
CAediting_954552	chr13_27652708_+	SINE	Alu	AluSz
CAediting_954553	chr13_27652709_+	SINE	Alu	AluSz
CAediting_954554	chr13_27652710_+	SINE	Alu	AluSz
CAediting_954555	chr13_27652711_+	SINE	Alu	AluSz
CAediting_954556	chr13_27652712_+	SINE	Alu	AluSz
CAediting_954557	chr13_27652714_+	SINE	Alu	AluSz
CAediting_954558	chr13_27652717_+	SINE	Alu	AluSz
CAediting_954559	chr13_27652718_+	SINE	Alu	AluSz
CAediting_954560	chr13_27652719_+	SINE	Alu	AluSz
CAediting_954561	chr13_27652720_+	SINE	Alu	AluSz
CAediting_954562	chr13_27652723_+	SINE	Alu	AluSz
CAediting_954563	chr13_27652727_+	SINE	Alu	AluSz
CAediting_954564	chr13_27652749_+	SINE	Alu	AluSz
CAediting_954565	chr13_27652750_+	SINE	Alu	AluSz
CAediting_954566	chr13_27652755_+	SINE	Alu	AluSz
CAediting_954567	chr13_27652759_+	SINE	Alu	AluSz
CAediting_954568	chr13_27652763_+	SINE	Alu	AluSz
CAediting_954569	chr13_27652769_+	SINE	Alu	AluSz
CAediting_954570	chr13_27652773_+	SINE	Alu	AluSz
CAediting_954571	chr13_27652778_+	SINE	Alu	AluSz
CAediting_954572	chr13_27652782_+	SINE	Alu	AluSz
CAediting_954573	chr13_27652787_+	SINE	Alu	AluSz
CAediting_954574	chr13_27652795_+	SINE	Alu	AluSz
CAediting_954575	chr13_27652797_+	SINE	Alu	AluSz
CAediting_954576	chr13_27652801_+	SINE	Alu	AluSz
CAediting_954577	chr13_27652806_+	SINE	Alu	AluSz
CAediting_954578	chr13_27652811_+	SINE	Alu	AluSz
CAediting_954579	chr13_27652812_+	SINE	Alu	AluSz
CAediting_954580	chr13_27652862_+	SINE	Alu	AluSz
CAediting_954581	chr13_27652874_+	SINE	Alu	AluSz
CAediting_954582	chr13_27652878_+	SINE	Alu	AluSz
CAediting_954583	chr13_27652879_+	SINE	Alu	AluSz
CAediting_954584	chr13_27652969_+	SINE	Alu	AluSg7
CAediting_954585	chr13_27652974_+	SINE	Alu	AluSg7
CAediting_954586	chr13_27652979_+	SINE	Alu	AluSg7
CAediting_954587	chr13_27652980_+	SINE	Alu	AluSg7
CAediting_954588	chr13_27653000_+	SINE	Alu	AluSg7
CAediting_954589	chr13_27653003_+	SINE	Alu	AluSg7
CAediting_954590	chr13_27653038_+	SINE	Alu	AluSg7
CAediting_954591	chr13_27653040_+	SINE	Alu	AluSg7
CAediting_954592	chr13_27653064_+	SINE	Alu	AluSg7
CAediting_954593	chr13_27653065_+	SINE	Alu	AluSg7
CAediting_954594	chr13_27653073_+	SINE	Alu	AluSg7
CAediting_954595	chr13_27653083_+	SINE	Alu	AluSg7
CAediting_954596	chr13_27653086_+	SINE	Alu	AluSg7
CAediting_954597	chr13_27653088_+	SINE	Alu	AluSg7
CAediting_954598	chr13_27653100_+	SINE	Alu	AluSg7
CAediting_954599	chr13_27653112_+	SINE	Alu	AluSg7
CAediting_954600	chr13_27653132_+	SINE	Alu	AluSg7
CAediting_954601	chr13_27653136_+	SINE	Alu	AluSg7
CAediting_954602	chr13_27653140_+	SINE	Alu	AluSg7
CAediting_954603	chr13_27653160_+	SINE	Alu	AluSg7
CAediting_954604	chr13_27653162_+	SINE	Alu	AluSg7
CAediting_954605	chr13_27653168_+	SINE	Alu	AluSg7
CAediting_954606	chr13_27653171_+	SINE	Alu	AluSg7
CAediting_954607	chr13_27653176_+	SINE	Alu	AluSg7
CAediting_954616	chr13_27653569_+	DNA	hAT-Charlie	Charlie1a
CAediting_954617	chr13_27653579_+	DNA	hAT-Charlie	Charlie1a
CAediting_954618	chr13_27653580_+	DNA	hAT-Charlie	Charlie1a
CAediting_954619	chr13_27653581_+	DNA	hAT-Charlie	Charlie1a
CAediting_954620	chr13_27653588_+	DNA	hAT-Charlie	Charlie1a
CAediting_954621	chr13_27653610_+	DNA	hAT-Charlie	Charlie1a
CAediting_954622	chr13_27653614_+	DNA	hAT-Charlie	Charlie1a
CAediting_954623	chr13_27653616_+	DNA	hAT-Charlie	Charlie1a
CAediting_954624	chr13_27653617_+	DNA	hAT-Charlie	Charlie1a
CAediting_954625	chr13_27653622_+	DNA	hAT-Charlie	Charlie1a
CAediting_954626	chr13_27653623_+	DNA	hAT-Charlie	Charlie1a
CAediting_954627	chr13_27653624_+	DNA	hAT-Charlie	Charlie1a
CAediting_954628	chr13_27653626_+	DNA	hAT-Charlie	Charlie1a
CAediting_954629	chr13_27653637_+	DNA	hAT-Charlie	Charlie1a
CAediting_954630	chr13_27653646_+	DNA	hAT-Charlie	Charlie1a
CAediting_954631	chr13_27653648_+	DNA	hAT-Charlie	Charlie1a
CAediting_954632	chr13_27653655_+	DNA	hAT-Charlie	Charlie1a
CAediting_954633	chr13_27653656_+	DNA	hAT-Charlie	Charlie1a
CAediting_954634	chr13_27653658_+	DNA	hAT-Charlie	Charlie1a
CAediting_954635	chr13_27653661_+	DNA	hAT-Charlie	Charlie1a
CAediting_954636	chr13_27653662_+	DNA	hAT-Charlie	Charlie1a
CAediting_954637	chr13_27653669_+	DNA	hAT-Charlie	Charlie1a
CAediting_954638	chr13_27653670_+	DNA	hAT-Charlie	Charlie1a
CAediting_954639	chr13_27653671_+	DNA	hAT-Charlie	Charlie1a
CAediting_954640	chr13_27653674_+	DNA	hAT-Charlie	Charlie1a
CAediting_954641	chr13_27653675_+	DNA	hAT-Charlie	Charlie1a
CAediting_954642	chr13_27653676_+	DNA	hAT-Charlie	Charlie1a
CAediting_954643	chr13_27653713_+	DNA	hAT-Charlie	Charlie1a
CAediting_954644	chr13_27653716_+	DNA	hAT-Charlie	Charlie1a
CAediting_954645	chr13_27653717_+	DNA	hAT-Charlie	Charlie1a
CAediting_954646	chr13_27653904_+	DNA	hAT-Charlie	Charlie1a
CAediting_954647	chr13_27653907_+	DNA	hAT-Charlie	Charlie1a
CAediting_954648	chr13_27653915_+	DNA	hAT-Charlie	Charlie1a
CAediting_954649	chr13_27653923_+	DNA	hAT-Charlie	Charlie1a
CAediting_954650	chr13_27653927_+	DNA	hAT-Charlie	Charlie1a
CAediting_954651	chr13_27653941_+	DNA	hAT-Charlie	Charlie1a
CAediting_954652	chr13_27653943_+	DNA	hAT-Charlie	Charlie1a
CAediting_954653	chr13_27653947_+	DNA	hAT-Charlie	Charlie1a
CAediting_954654	chr13_27653950_+	DNA	hAT-Charlie	Charlie1a
CAediting_954655	chr13_27653952_+	DNA	hAT-Charlie	Charlie1a
CAediting_954656	chr13_27653953_+	DNA	hAT-Charlie	Charlie1a
CAediting_954657	chr13_27653954_+	DNA	hAT-Charlie	Charlie1a
CAediting_954658	chr13_27653959_+	DNA	hAT-Charlie	Charlie1a
CAediting_954659	chr13_27653960_+	DNA	hAT-Charlie	Charlie1a
CAediting_954660	chr13_27653962_+	DNA	hAT-Charlie	Charlie1a
CAediting_954661	chr13_27653963_+	DNA	hAT-Charlie	Charlie1a
CAediting_954662	chr13_27653964_+	DNA	hAT-Charlie	Charlie1a
CAediting_954663	chr13_27653978_+	DNA	hAT-Charlie	Charlie1a
CAediting_954664	chr13_27653982_+	DNA	hAT-Charlie	Charlie1a
CAediting_954665	chr13_27653983_+	DNA	hAT-Charlie	Charlie1a
CAediting_954666	chr13_27653990_+	DNA	hAT-Charlie	Charlie1a
CAediting_954667	chr13_27653993_+	DNA	hAT-Charlie	Charlie1a
CAediting_954668	chr13_27653997_+	DNA	hAT-Charlie	Charlie1a
CAediting_954669	chr13_27654012_+	DNA	hAT-Charlie	Charlie1a
CAediting_954670	chr13_27654014_+	DNA	hAT-Charlie	Charlie1a
CAediting_954671	chr13_27654021_+	DNA	hAT-Charlie	Charlie1a
CAediting_954672	chr13_27654022_+	DNA	hAT-Charlie	Charlie1a
CAediting_954673	chr13_27654024_+	DNA	hAT-Charlie	Charlie1a
CAediting_954674	chr13_27654025_+	DNA	hAT-Charlie	Charlie1a
CAediting_954675	chr13_27654026_+	DNA	hAT-Charlie	Charlie1a
CAediting_954676	chr13_27654028_+	DNA	hAT-Charlie	Charlie1a
CAediting_954677	chr13_27654029_+	DNA	hAT-Charlie	Charlie1a
CAediting_954678	chr13_27654032_+	DNA	hAT-Charlie	Charlie1a
CAediting_954679	chr13_27654042_+	DNA	hAT-Charlie	Charlie1a
CAediting_954680	chr13_27654056_+	DNA	hAT-Charlie	Charlie1a
CAediting_954681	chr13_27654059_+	DNA	hAT-Charlie	Charlie1a
CAediting_954682	chr13_27654060_+	DNA	hAT-Charlie	Charlie1a
CAediting_954683	chr13_27654062_+	DNA	hAT-Charlie	Charlie1a
CAediting_954684	chr13_27654069_+	DNA	hAT-Charlie	Charlie1a
CAediting_954685	chr13_27654073_+	DNA	hAT-Charlie	Charlie1a
CAediting_954686	chr13_27654075_+	DNA	hAT-Charlie	Charlie1a
CAediting_954687	chr13_27654083_+	DNA	hAT-Charlie	Charlie1a
CAediting_954688	chr13_27654087_+	DNA	hAT-Charlie	Charlie1a
CAediting_954689	chr13_27654093_+	DNA	hAT-Charlie	Charlie1a
CAediting_954690	chr13_27654094_+	DNA	hAT-Charlie	Charlie1a
CAediting_954691	chr13_27654095_+	DNA	hAT-Charlie	Charlie1a
CAediting_954692	chr13_27654108_+	DNA	hAT-Charlie	Charlie1a
CAediting_954693	chr13_27658088_+	DNA	hAT-Charlie	MER5B

Top

RNA A-to-I editing events in the alternative splicing sites for POLR1D

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000186184.14.POLR1D.

Correlation between RNA A-to-I editing and PSI for ENSG00000186184.14.POLR1D.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for POLR1D

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

CESC.CAediting_954634.ENSG00000186184.POLR1D.png
Soverview

COAD.CAediting_954462.ENSG00000186184.POLR1D.png
Soverview

COAD.CAediting_954479.ENSG00000186184.POLR1D.png
Soverview

COAD.CAediting_954522.ENSG00000186184.POLR1D.png
Soverview

COAD.CAediting_954526.ENSG00000186184.POLR1D.png
Soverview

COAD.CAediting_954533.ENSG00000186184.POLR1D.png
Soverview

COAD.CAediting_954632.ENSG00000186184.POLR1D.png
Soverview

ESCA.CAediting_954500.ENSG00000186184.POLR1D.png
Soverview

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Protein coding region RNA A-to-I editings for POLR1D

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for POLR1D

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000186184.14	ENST00000621089	hsa-miR-4477b	27666484	27666491	8mer-1a	27666470	27666491	153	-13.79
CAediting_688080	chr9_63819626_+	ENSG00000186184.14	ENST00000399697	hsa-miR-4477b	27666484	27666491	8mer-1a	27666470	27666491	153	-13.79
CAediting_980496	chr14_31014685_-	ENSG00000186184.14	ENST00000489647	hsa-miR-624-3p	27650920	27650926	7mer-m8	27650908	27650927	153	-16.57
CAediting_393	chr1_1167164_+	ENSG00000186184.14	ENST00000489647	hsa-miR-200b-3p	27650204	27650210	7mer-m8	27650189	27650211	154	-14.81
CAediting_748296	chr10_51299626_+	ENSG00000186184.14	ENST00000630983	hsa-miR-605-3p	27665747	27665753	7mer-m8	27665735	27665754	156	-16.33
CAediting_688080	chr9_63819626_+	ENSG00000186184.14	ENST00000630983	hsa-miR-4477b	27666484	27666491	8mer-1a	27666470	27666491	153	-13.79
CAediting_393	chr1_1167164_+	ENSG00000186184.14	ENST00000465887	hsa-miR-200b-3p	27650204	27650210	7mer-m8	27650189	27650211	154	-14.81
CAediting_748296	chr10_51299626_+	ENSG00000186184.14	ENST00000465887	hsa-miR-605-3p	27665747	27665753	7mer-m8	27665735	27665754	156	-16.33
CAediting_688080	chr9_63819626_+	ENSG00000186184.14	ENST00000465887	hsa-miR-4477b	27666484	27666491	8mer-1a	27666470	27666491	153	-13.79
CAediting_1229415	chr17_67471547_+	ENSG00000186184.14	ENST00000621089	hsa-miR-548aa	27666493	27666499	7mer-m8	27666474	27666500	150	-15.45
CAediting_1229415	chr17_67471547_+	ENSG00000186184.14	ENST00000399697	hsa-miR-548aa	27666493	27666499	7mer-m8	27666474	27666500	150	-15.45
CAediting_86358	chr1_109598906_+	ENSG00000186184.14	ENST00000399697	hsa-miR-197-5p	27667166	27667172	7mer-m8	27667152	27667173	149	-20.99
CAediting_1229413	chr17_67471544_+	ENSG00000186184.14	ENST00000489647	hsa-miR-548aa	27650351	27650357	7mer-1a	27650331	27650357	142	-17.25
CAediting_1368054	chr19_46709310_-	ENSG00000186184.14	ENST00000489647	hsa-miR-320e	27650489	27650495	7mer-m8	27650476	27650496	141	-16.8
CAediting_1368054	chr19_46709310_-	ENSG00000186184.14	ENST00000489647	hsa-miR-320e	27650520	27650526	7mer-m8	27650510	27650527	140	-13.39
CAediting_86358	chr1_109598906_+	ENSG00000186184.14	ENST00000489647	hsa-miR-197-5p	27650525	27650531	7mer-m8	27650509	27650532	150	-22.14
CAediting_228905	chr2_188297554_+	ENSG00000186184.14	ENST00000489647	hsa-miR-561-3p	27650605	27650611	7mer-m8	27650591	27650612	140	-9.71
CAediting_1229415	chr17_67471547_+	ENSG00000186184.14	ENST00000630983	hsa-miR-548aa	27666493	27666499	7mer-m8	27666474	27666500	150	-15.45
CAediting_86358	chr1_109598906_+	ENSG00000186184.14	ENST00000630983	hsa-miR-197-5p	27667166	27667172	7mer-m8	27667152	27667173	149	-20.99
CAediting_1229415	chr17_67471547_+	ENSG00000186184.14	ENST00000465887	hsa-miR-548aa	27666493	27666499	7mer-m8	27666474	27666500	150	-15.45
CAediting_86358	chr1_109598906_+	ENSG00000186184.14	ENST00000465887	hsa-miR-197-5p	27667166	27667172	7mer-m8	27667152	27667173	149	-20.99
CAediting_468389	chr6_31355314_-	ENSG00000186184.14	ENST00000621089	hsa-miR-6891-5p	27666874	27666880	7mer-m8	27666863	27666881	149	-21.74
CAediting_468389	chr6_31355314_-	ENSG00000186184.14	ENST00000399697	hsa-miR-6891-5p	27666874	27666880	7mer-m8	27666863	27666881	149	-21.74
CAediting_468389	chr6_31355314_-	ENSG00000186184.14	ENST00000630983	hsa-miR-6891-5p	27666874	27666880	7mer-m8	27666863	27666881	149	-21.74
CAediting_468389	chr6_31355314_-	ENSG00000186184.14	ENST00000465887	hsa-miR-6891-5p	27666874	27666880	7mer-m8	27666863	27666881	149	-21.74

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229414	chr17_67471546_+	ENSG00000186184.14	ENST00000621089	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1229415	chr17_67471547_+	ENSG00000186184.14	ENST00000621089	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1229413	chr17_67471544_+	ENSG00000186184.14	ENST00000621089	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1351755	chr19_40282625_-	ENSG00000186184.14	ENST00000621089	hsa-miR-641	27666149	27666155	7mer-m8	27666133	27666156	140	-12.14
CAediting_393	chr1_1167164_+	ENSG00000186184.14	ENST00000399697	hsa-miR-200b-3p	27666781	27666787	7mer-m8	27666768	27666788	145	-10.19
CAediting_1229414	chr17_67471546_+	ENSG00000186184.14	ENST00000399697	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1229415	chr17_67471547_+	ENSG00000186184.14	ENST00000399697	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1229413	chr17_67471544_+	ENSG00000186184.14	ENST00000399697	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1351755	chr19_40282625_-	ENSG00000186184.14	ENST00000399697	hsa-miR-641	27666149	27666155	7mer-m8	27666133	27666156	140	-12.14
CAediting_228905	chr2_188297554_+	ENSG00000186184.14	ENST00000489647	hsa-miR-561-3p	27650974	27650981	8mer-1a	27650960	27650981	147	-3.7
CAediting_393	chr1_1167164_+	ENSG00000186184.14	ENST00000630983	hsa-miR-200b-3p	27666781	27666787	7mer-m8	27666768	27666788	145	-10.19
CAediting_1229414	chr17_67471546_+	ENSG00000186184.14	ENST00000630983	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1229415	chr17_67471547_+	ENSG00000186184.14	ENST00000630983	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1229413	chr17_67471544_+	ENSG00000186184.14	ENST00000630983	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1351755	chr19_40282625_-	ENSG00000186184.14	ENST00000630983	hsa-miR-641	27666149	27666155	7mer-m8	27666133	27666156	140	-12.14
CAediting_393	chr1_1167164_+	ENSG00000186184.14	ENST00000465887	hsa-miR-200b-3p	27666781	27666787	7mer-m8	27666768	27666788	145	-10.19
CAediting_1229414	chr17_67471546_+	ENSG00000186184.14	ENST00000465887	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1229415	chr17_67471547_+	ENSG00000186184.14	ENST00000465887	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1229413	chr17_67471544_+	ENSG00000186184.14	ENST00000465887	hsa-miR-548aa	27666787	27666793	7mer-m8	27666770	27666794	145	-8.23
CAediting_1351755	chr19_40282625_-	ENSG00000186184.14	ENST00000465887	hsa-miR-641	27666149	27666155	7mer-m8	27666133	27666156	140	-12.14

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for POLR1D

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for POLR1D

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_954479	chr13_27651758_+	0.010626056261719	0.305739765736246	.	.	.	.
PRAD	CAediting_954479	chr13_27651758_+	0.0104110174637515	0.306549227975703	.	.	.	.
BRCA	CAediting_954505	chr13_27652136_+	0.0241377160490315	0.31546369256961	.	.	.	.
BRCA	CAediting_954506	chr13_27652137_+	0.0317632088833737	0.304142922188919	.	.	.	.
BRCA	CAediting_954526	chr13_27652237_+	0.00979250755826582	0.245313126282262	.	.	.	.
PRAD	CAediting_954526	chr13_27652237_+	0.00220976088329863	0.244850889225849	.	.	.	.
SKCM	CAediting_954526	chr13_27652237_+	0.0138457322562203	0.324319875038167	.	.	.	.
LUSC	CAediting_954529	chr13_27652244_+	0.0407815326379059	0.287509746663615	.	.	.	.
PRAD	CAediting_954584	chr13_27652969_+	0.00506526403684806	0.324713920182737	.	.	.	.
BRCA	CAediting_954608	chr13_27653505_+	.	.	0.0181578456553377	0.287889682547894	.	.
BRCA	CAediting_954610	chr13_27653516_+	0.0120561010366672	0.15519815613172	.	.	.	.
CESC	CAediting_954610	chr13_27653516_+	0.00673588148044178	0.298802730881097	.	.	.	.
LUSC	CAediting_954610	chr13_27653516_+	0.0256357260477205	0.202038832730923	.	.	.	.
SKCM	CAediting_954610	chr13_27653516_+	0.00336559742118012	0.289106790767642	.	.	.	.
BLCA	CAediting_954620	chr13_27653588_+	0.00701095125954008	0.269383095582889	.	.	.	.
CESC	CAediting_954620	chr13_27653588_+	0.046673341962133	0.242118887501558	.	.	.	.
LUSC	CAediting_954620	chr13_27653588_+	0.0266313198719152	0.239072669155661	.	.	.	.
SKCM	CAediting_954620	chr13_27653588_+	0.00333812304328565	0.32234228042246	.	.	.	.
ESCA	CAediting_954627	chr13_27653624_+	0.0418536799966962	0.253191037769015	.	.	.	.
HNSC	CAediting_954629	chr13_27653637_+	0.04670257426653	0.277131136500998	.	.	.	.
KIRC	CAediting_954629	chr13_27653637_+	0.0131729625288204	0.326538137083999	.	.	.	.
BLCA	CAediting_954632	chr13_27653655_+	8.03914419567013e-05	0.332750330162853	.	.	.	.
BRCA	CAediting_954634	chr13_27653658_+	0.0400712872548887	0.147926064554988	.	.	.	.
LUSC	CAediting_954634	chr13_27653658_+	0.0230376778506222	0.269504696698794	.	.	.	.
KIRC	CAediting_954634	chr13_27653658_+	0.00399614730883147	0.396247089154139	.	.	.	.
BLCA	CAediting_954647	chr13_27653907_+	0.0444076509811799	0.262712976428881	0.00155337275064453	0.402986651525645	.	.
PRAD	CAediting_954647	chr13_27653907_+	0.00294069475595477	0.244474733822603	.	.	.	.
BLCA	CAediting_954652	chr13_27653943_+	3.07999728975885e-05	0.47938650788868	0.0127452361978014	0.298442803355063	.	.
PRAD	CAediting_954652	chr13_27653943_+	0.0284169070788079	0.176642786053909	.	.	.	.
STAD	CAediting_954652	chr13_27653943_+	0.0111852101954105	0.291437349852581	.	.	.	.
PRAD	CAediting_954656	chr13_27653953_+	0.0234391093306897	0.23614433803508	.	.	.	.
PRAD	CAediting_954657	chr13_27653954_+	0.0330800882394732	0.223654575444532	.	.	.	.
BLCA	CAediting_954658	chr13_27653959_+	0.000541910945439237	0.395076331406587	.	.	.	.
PRAD	CAediting_954664	chr13_27653982_+	0.0487968267052292	0.262204001239969	.	.	.	.
PRAD	CAediting_954666	chr13_27653990_+	0.00248986927598596	0.28434781447787	.	.	.	.
PRAD	CAediting_954668	chr13_27653997_+	0.00979062657712976	0.216114261014041	.	.	.	.
BLCA	CAediting_954672	chr13_27654022_+	0.0104997961591163	0.313003832479391	.	.	.	.
PRAD	CAediting_954672	chr13_27654022_+	0.000231668715939405	0.306390993566133	.	.	.	.
BLCA	CAediting_954674	chr13_27654025_+	0.00999502209669633	0.317365268450666	.	.	.	.
PRAD	CAediting_954674	chr13_27654025_+	4.78427358442979e-05	0.328786614650651	0.00990828292886369	0.212098305410357	.	.
PRAD	CAediting_954675	chr13_27654026_+	0.0185194973475927	0.266127099910875	0.000263335721057552	0.402070561061405	.	.
BLCA	CAediting_954677	chr13_27654029_+	0.02386940459756	0.312989151461883	.	.	.	.
PRAD	CAediting_954682	chr13_27654060_+	.	.	0.0262193375999498	0.234322131681119	.	.
COAD	CAediting_954686	chr13_27654075_+	0.00598035544852604	0.342634113614031	.	.	.	.
PRAD	CAediting_954686	chr13_27654075_+	0.00553922071018662	0.244805567121438	.	.	.	.
STAD	CAediting_954689	chr13_27654093_+	.	.	0.012959824717064	0.33922487933912	.	.

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Relation with cancer stages for POLR1D

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_954627	chr13_27653624_+	0.0399446046380043	-0.502207783049429
KIRC	pathologic_stage	CAediting_954634	chr13_27653658_+	0.0146118224346778	0.343442072009318
STAD	pathologic_stage	CAediting_954632	chr13_27653655_+	0.00266614708072311	0.30484980008286
STAD	pathologic_stage	CAediting_954661	chr13_27653963_+	0.026637521087396	-0.26688493104359

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Relation with survival for POLR1D

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
CESC	CAediting_954632	chr13_27653655_+	0.00037526650444808	0.041295	49.1104
LUSC	CAediting_954529	chr13_27652244_+	0.0116842230644595	0.00879946	2519.78
READ	CAediting_954610	chr13_27653516_+	0.0353916579970868	0.0174593	5704.58

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RelatedDrugs for POLR1D

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for POLR1D

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
POLR1D	C3150983	TREACHER COLLINS SYNDROME 2	2	CTD_human;GENOMICS_ENGLAND;UNIPROT
POLR1D	C0013146	Drug abuse	1	CTD_human
POLR1D	C0013170	Drug habituation	1	CTD_human
POLR1D	C0013222	Drug Use Disorders	1	CTD_human
POLR1D	C0029231	Organic Mental Disorders, Substance-Induced	1	CTD_human
POLR1D	C0038580	Substance Dependence	1	CTD_human
POLR1D	C0038586	Substance Use Disorders	1	CTD_human
POLR1D	C0152013	Adenocarcinoma of lung (disorder)	1	CTD_human
POLR1D	C0152423	Congenital small ears	1	GENOMICS_ENGLAND
POLR1D	C0236969	Substance-Related Disorders	1	CTD_human
POLR1D	C0242387	Mandibulofacial Dysostosis	1	CTD_human
POLR1D	C0740858	Substance abuse problem	1	CTD_human
POLR1D	C1510472	Drug Dependence	1	CTD_human
POLR1D	C4316881	Prescription Drug Abuse	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene