CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: RPS27L (CAeditome ID:51065)

Gene summary for RPS27L

check button Gene summary
Gene informationGene symbol

RPS27L

Gene ID

51065

Gene nameribosomal protein S27 like
Synonyms-
Cytomap

15q22.2

Type of geneprotein-coding
Description40S ribosomal protein S27-likesmall ribosomal subunit protein eS27-like
Modification date20210518
UniProtAcc

Q71UM5

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
RPS27L

GO:0008494

40S ribosomal protein S27-like

18056458

RPS27L

GO:0008656

40S ribosomal protein S27-like

17057733

RPS27L

GO:0006919

40S ribosomal protein S27-like

17057733

RPS27L

GO:0006978

40S ribosomal protein S27-like

18056458

RPS27L

GO:0042771

40S ribosomal protein S27-like

17057733

RPS27L

GO:0042771

40S ribosomal protein S27-like

18056458

RPS27L

GO:0045727

40S ribosomal protein S27-like

18056458

RPS27L

GO:0005634

40S ribosomal protein S27-like

18056458


Top

RNA A-to-I events for RPS27L

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000185088.11

check button RNA A-to-I editing events in Cancer.
CAediting_1047573(63142211, -), CAediting_1047574(63142236, -), CAediting_1047575(63145260, -), CAediting_1047576(63145285, -), CAediting_1047577(63146382, -), CAediting_1047578(63147477, -), CAediting_1047579(63148092, -), CAediting_1047580(63148093, -), CAediting_1047581(63148866, -), CAediting_1047582(63148888, -), CAediting_1047583(63148894, -), CAediting_1047584(63148911, -), CAediting_1047585(63148935, -), CAediting_1047586(63148955, -), CAediting_1047587(63148970, -), CAediting_1047588(63148987, -), CAediting_1047589(63148991, -), CAediting_1047590(63148997, -), CAediting_1047591(63149023, -), CAediting_1047592(63149026, -), CAediting_1047593(63149027, -), CAediting_1047594(63149032, -), CAediting_1047595(63149035, -), CAediting_1047596(63149036, -), CAediting_1047597(63149037, -), CAediting_1047598(63149038, -), CAediting_1047599(63149052, -), CAediting_1047600(63149057, -), CAediting_1047601(63149060, -), CAediting_1047602(63149062, -), CAediting_1047603(63149063, -), CAediting_1047604(63149072, -), CAediting_1047605(63149075, -), CAediting_1047606(63149077, -), CAediting_1047607(63149092, -), CAediting_1047608(63149120, -), CAediting_1047609(63149126, -), CAediting_1047610(63149127, -), CAediting_1047611(63149374, -), CAediting_1047612(63149396, -), CAediting_1047613(63149399, -), CAediting_1047614(63149410, -), CAediting_1047615(63149445, -), CAediting_1047616(63149450, -), CAediting_1047617(63149455, -), CAediting_1047618(63149467, -), CAediting_1047619(63149480, -), CAediting_1047620(63149485, -), CAediting_1047621(63149504, -), CAediting_1047622(63149510, -), CAediting_1047623(63149515, -), CAediting_1047624(63149520, -), CAediting_1047625(63149521, -), CAediting_1047626(63149534, -), CAediting_1047627(63149807, -), CAediting_1047628(63149814, -), CAediting_1047629(63149816, -), CAediting_1047630(63149828, -), CAediting_1047631(63149829, -), CAediting_1047632(63149838, -), CAediting_1047633(63149843, -), CAediting_1047634(63149881, -), CAediting_1047635(63149890, -), CAediting_1047636(63149916, -), CAediting_1047637(63149925, -), CAediting_1047638(63149926, -), CAediting_1047639(63149934, -), CAediting_1047640(63149939, -), CAediting_1047641(63149946, -), CAediting_1047642(63149950, -), CAediting_1047643(63149952, -), CAediting_1047644(63149955, -), CAediting_1047645(63149962, -), CAediting_1047646(63149974, -), CAediting_1047647(63150020, -), CAediting_1047648(63150025, -), CAediting_1047649(63150039, -), CAediting_1047650(63150074, -), CAediting_1047651(63150081, -), CAediting_1047652(63150085, -), CAediting_1047653(63150089, -), CAediting_1047654(63150325, -), CAediting_1047655(63150370, -), CAediting_1047656(63150377, -), CAediting_1047657(63150391, -), CAediting_1047658(63150392, -), CAediting_1047659(63150451, -), CAediting_1047660(63150469, -), CAediting_1047661(63150670, -), CAediting_1047662(63150676, -), CAediting_1047663(63150703, -), CAediting_1047664(63150708, -), CAediting_1047665(63150717, -), CAediting_1047666(63150805, -), CAediting_1047667(63150824, -), CAediting_1047668(63150866, -), CAediting_1047669(63150912, -), CAediting_1047670(63150913, -), CAediting_1047671(63151269, -), CAediting_1047672(63151294, -), CAediting_1047673(63151299, -), CAediting_1047674(63151300, -), CAediting_1047675(63151301, -), CAediting_1047676(63151302, -), CAediting_1047677(63151310, -), CAediting_1047678(63151319, -), CAediting_1047679(63151339, -), CAediting_1047680(63151362, -), CAediting_1047681(63151366, -), CAediting_1047682(63151404, -), CAediting_1047683(63151476, -), CAediting_1047684(63151480, -), CAediting_1047685(63151490, -), CAediting_1047686(63151506, -), CAediting_1047687(63151507, -), CAediting_1047688(63151509, -), CAediting_1047689(63152045, -), CAediting_1047690(63152120, -), CAediting_1047691(63152141, -), CAediting_1047692(63152160, -), CAediting_1047693(63152162, -), CAediting_1047694(63152167, -), CAediting_1047695(63152184, -), CAediting_1047696(63152192, -), CAediting_1047697(63152193, -), CAediting_1047698(63152196, -), CAediting_1047699(63152227, -), CAediting_1047700(63152263, -), CAediting_1047701(63152265, -), CAediting_1047702(63152561, -), CAediting_1047703(63152562, -), CAediting_1047704(63152590, -), CAediting_1047705(63152591, -), CAediting_1047706(63152606, -), CAediting_1047707(63152624, -), CAediting_1047708(63152633, -), CAediting_1047709(63152634, -), CAediting_1047710(63152642, -), CAediting_1047711(63152660, -), CAediting_1047712(63152696, -), CAediting_1047713(63152699, -), CAediting_1047714(63152702, -), CAediting_1047715(63153577, -), CAediting_1047716(63153590, -), CAediting_1047717(63153595, -), CAediting_1047718(63153601, -), CAediting_1047719(63153603, -), CAediting_1047720(63153613, -), CAediting_1047721(63153616, -), CAediting_1047722(63153617, -), CAediting_1047723(63153639, -), CAediting_1047724(63153643, -), CAediting_1047725(63153649, -), CAediting_1047726(63153662, -), CAediting_1047727(63153663, -), CAediting_1047728(63153668, -), CAediting_1047729(63153678, -), CAediting_1047730(63153687, -), CAediting_1047731(63153703, -), CAediting_1047732(63153719, -), CAediting_1047733(63155099, -), CAediting_1047734(63155140, -), CAediting_1047735(63155150, -), CAediting_1047736(63155180, -), CAediting_1047737(63155236, -),

Top

RNA editing positional annotations for RPS27L using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1047573chr15_63142211_-ncRNA_intronic
CAediting_1047574chr15_63142236_-ncRNA_intronic
CAediting_1047575chr15_63145260_-ncRNA_intronic
CAediting_1047576chr15_63145285_-ncRNA_intronic
CAediting_1047577chr15_63146382_-ncRNA_intronic
CAediting_1047578chr15_63147477_-ncRNA_intronic
CAediting_1047579chr15_63148092_-ncRNA_intronic
CAediting_1047580chr15_63148093_-ncRNA_intronic
CAediting_1047581chr15_63148866_-ncRNA_intronic
CAediting_1047582chr15_63148888_-ncRNA_intronic
CAediting_1047583chr15_63148894_-ncRNA_intronic
CAediting_1047584chr15_63148911_-ncRNA_intronic
CAediting_1047585chr15_63148935_-ncRNA_intronic
CAediting_1047586chr15_63148955_-ncRNA_intronic
CAediting_1047587chr15_63148970_-ncRNA_intronic
CAediting_1047588chr15_63148987_-ncRNA_intronic
CAediting_1047589chr15_63148991_-ncRNA_intronic
CAediting_1047590chr15_63148997_-ncRNA_intronic
CAediting_1047591chr15_63149023_-ncRNA_intronic
CAediting_1047592chr15_63149026_-ncRNA_intronic
CAediting_1047593chr15_63149027_-ncRNA_intronic
CAediting_1047594chr15_63149032_-ncRNA_intronic
CAediting_1047595chr15_63149035_-ncRNA_intronic
CAediting_1047596chr15_63149036_-ncRNA_intronic
CAediting_1047597chr15_63149037_-ncRNA_intronic
CAediting_1047598chr15_63149038_-ncRNA_intronic
CAediting_1047599chr15_63149052_-ncRNA_intronic
CAediting_1047600chr15_63149057_-ncRNA_intronic
CAediting_1047601chr15_63149060_-ncRNA_intronic
CAediting_1047602chr15_63149062_-ncRNA_intronic
CAediting_1047603chr15_63149063_-ncRNA_intronic
CAediting_1047604chr15_63149072_-ncRNA_intronic
CAediting_1047605chr15_63149075_-ncRNA_intronic
CAediting_1047606chr15_63149077_-ncRNA_intronic
CAediting_1047607chr15_63149092_-ncRNA_intronic
CAediting_1047608chr15_63149120_-ncRNA_intronic
CAediting_1047609chr15_63149126_-ncRNA_intronic
CAediting_1047610chr15_63149127_-ncRNA_intronic
CAediting_1047611chr15_63149374_-ncRNA_intronic
CAediting_1047612chr15_63149396_-ncRNA_intronic
CAediting_1047613chr15_63149399_-ncRNA_intronic
CAediting_1047614chr15_63149410_-ncRNA_intronic
CAediting_1047615chr15_63149445_-ncRNA_intronic
CAediting_1047616chr15_63149450_-ncRNA_intronic
CAediting_1047617chr15_63149455_-ncRNA_intronic
CAediting_1047618chr15_63149467_-ncRNA_intronic
CAediting_1047619chr15_63149480_-ncRNA_intronic
CAediting_1047620chr15_63149485_-ncRNA_intronic
CAediting_1047621chr15_63149504_-ncRNA_intronic
CAediting_1047622chr15_63149510_-ncRNA_intronic
CAediting_1047623chr15_63149515_-ncRNA_intronic
CAediting_1047624chr15_63149520_-ncRNA_intronic
CAediting_1047625chr15_63149521_-ncRNA_intronic
CAediting_1047626chr15_63149534_-ncRNA_intronic
CAediting_1047627chr15_63149807_-ncRNA_intronic
CAediting_1047628chr15_63149814_-ncRNA_intronic
CAediting_1047629chr15_63149816_-ncRNA_intronic
CAediting_1047630chr15_63149828_-ncRNA_intronic
CAediting_1047631chr15_63149829_-ncRNA_intronic
CAediting_1047632chr15_63149838_-ncRNA_intronic
CAediting_1047633chr15_63149843_-ncRNA_intronic
CAediting_1047634chr15_63149881_-ncRNA_intronic
CAediting_1047635chr15_63149890_-ncRNA_intronic
CAediting_1047636chr15_63149916_-ncRNA_intronic
CAediting_1047637chr15_63149925_-ncRNA_intronic
CAediting_1047638chr15_63149926_-ncRNA_intronic
CAediting_1047639chr15_63149934_-ncRNA_intronic
CAediting_1047640chr15_63149939_-ncRNA_intronic
CAediting_1047641chr15_63149946_-ncRNA_intronic
CAediting_1047642chr15_63149950_-ncRNA_intronic
CAediting_1047643chr15_63149952_-ncRNA_intronic
CAediting_1047644chr15_63149955_-ncRNA_intronic
CAediting_1047645chr15_63149962_-ncRNA_intronic
CAediting_1047646chr15_63149974_-ncRNA_intronic
CAediting_1047647chr15_63150020_-ncRNA_intronic
CAediting_1047648chr15_63150025_-ncRNA_intronic
CAediting_1047649chr15_63150039_-ncRNA_intronic
CAediting_1047650chr15_63150074_-ncRNA_intronic
CAediting_1047651chr15_63150081_-ncRNA_intronic
CAediting_1047652chr15_63150085_-ncRNA_intronic
CAediting_1047653chr15_63150089_-ncRNA_intronic
CAediting_1047654chr15_63150325_-ncRNA_intronic
CAediting_1047655chr15_63150370_-ncRNA_intronic
CAediting_1047656chr15_63150377_-ncRNA_intronic
CAediting_1047657chr15_63150391_-ncRNA_intronic
CAediting_1047658chr15_63150392_-ncRNA_intronic
CAediting_1047659chr15_63150451_-ncRNA_intronic
CAediting_1047660chr15_63150469_-ncRNA_intronic
CAediting_1047661chr15_63150670_-ncRNA_intronic
CAediting_1047662chr15_63150676_-ncRNA_intronic
CAediting_1047663chr15_63150703_-ncRNA_intronic
CAediting_1047664chr15_63150708_-ncRNA_intronic
CAediting_1047665chr15_63150717_-ncRNA_intronic
CAediting_1047666chr15_63150805_-ncRNA_intronic
CAediting_1047667chr15_63150824_-ncRNA_intronic
CAediting_1047668chr15_63150866_-ncRNA_intronic
CAediting_1047669chr15_63150912_-ncRNA_intronic
CAediting_1047670chr15_63150913_-ncRNA_intronic
CAediting_1047671chr15_63151269_-ncRNA_intronic
CAediting_1047672chr15_63151294_-ncRNA_intronic
CAediting_1047673chr15_63151299_-ncRNA_intronic
CAediting_1047674chr15_63151300_-ncRNA_intronic
CAediting_1047675chr15_63151301_-ncRNA_intronic
CAediting_1047676chr15_63151302_-ncRNA_intronic
CAediting_1047677chr15_63151310_-ncRNA_intronic
CAediting_1047678chr15_63151319_-ncRNA_intronic
CAediting_1047679chr15_63151339_-ncRNA_intronic
CAediting_1047680chr15_63151362_-ncRNA_intronic
CAediting_1047681chr15_63151366_-ncRNA_intronic
CAediting_1047682chr15_63151404_-ncRNA_intronic
CAediting_1047683chr15_63151476_-ncRNA_intronic
CAediting_1047684chr15_63151480_-ncRNA_intronic
CAediting_1047685chr15_63151490_-ncRNA_intronic
CAediting_1047686chr15_63151506_-ncRNA_intronic
CAediting_1047687chr15_63151507_-ncRNA_intronic
CAediting_1047688chr15_63151509_-ncRNA_intronic
CAediting_1047689chr15_63152045_-ncRNA_intronic
CAediting_1047690chr15_63152120_-ncRNA_intronic
CAediting_1047691chr15_63152141_-ncRNA_intronic
CAediting_1047692chr15_63152160_-ncRNA_intronic
CAediting_1047693chr15_63152162_-ncRNA_intronic
CAediting_1047694chr15_63152167_-ncRNA_intronic
CAediting_1047695chr15_63152184_-ncRNA_intronic
CAediting_1047696chr15_63152192_-ncRNA_intronic
CAediting_1047697chr15_63152193_-ncRNA_intronic
CAediting_1047698chr15_63152196_-ncRNA_intronic
CAediting_1047699chr15_63152227_-ncRNA_intronic
CAediting_1047700chr15_63152263_-ncRNA_intronic
CAediting_1047701chr15_63152265_-ncRNA_intronic
CAediting_1047702chr15_63152561_-ncRNA_intronic
CAediting_1047703chr15_63152562_-ncRNA_intronic
CAediting_1047704chr15_63152590_-ncRNA_intronic
CAediting_1047705chr15_63152591_-ncRNA_intronic
CAediting_1047706chr15_63152606_-ncRNA_intronic
CAediting_1047707chr15_63152624_-ncRNA_intronic
CAediting_1047708chr15_63152633_-ncRNA_intronic
CAediting_1047709chr15_63152634_-ncRNA_intronic
CAediting_1047710chr15_63152642_-ncRNA_intronic
CAediting_1047711chr15_63152660_-ncRNA_intronic
CAediting_1047712chr15_63152696_-ncRNA_intronic
CAediting_1047713chr15_63152699_-ncRNA_intronic
CAediting_1047714chr15_63152702_-ncRNA_intronic
CAediting_1047715chr15_63153577_-ncRNA_intronic
CAediting_1047716chr15_63153590_-ncRNA_intronic
CAediting_1047717chr15_63153595_-ncRNA_intronic
CAediting_1047718chr15_63153601_-ncRNA_intronic
CAediting_1047719chr15_63153603_-ncRNA_intronic
CAediting_1047720chr15_63153613_-ncRNA_intronic
CAediting_1047721chr15_63153616_-ncRNA_intronic
CAediting_1047722chr15_63153617_-ncRNA_intronic
CAediting_1047723chr15_63153639_-ncRNA_intronic
CAediting_1047724chr15_63153643_-ncRNA_intronic
CAediting_1047725chr15_63153649_-ncRNA_intronic
CAediting_1047726chr15_63153662_-ncRNA_intronic
CAediting_1047727chr15_63153663_-ncRNA_intronic
CAediting_1047728chr15_63153668_-ncRNA_intronic
CAediting_1047729chr15_63153678_-ncRNA_intronic
CAediting_1047730chr15_63153687_-ncRNA_intronic
CAediting_1047731chr15_63153703_-ncRNA_intronic
CAediting_1047732chr15_63153719_-ncRNA_intronic
CAediting_1047733chr15_63155099_-ncRNA_exonic
CAediting_1047734chr15_63155140_-ncRNA_exonic
CAediting_1047735chr15_63155150_-ncRNA_exonic
CAediting_1047736chr15_63155180_-ncRNA_exonic
CAediting_1047737chr15_63155236_-ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1047573chr15_63142211_-SINEAluAluSx1
CAediting_1047574chr15_63142236_-SINEAluAluSx1
CAediting_1047575chr15_63145260_-LINEL1L1MB7
CAediting_1047576chr15_63145285_-LINEL1L1MB7
CAediting_1047577chr15_63146382_-SINEAluAluJr
CAediting_1047578chr15_63147477_-SINEAluAluSq2
CAediting_1047579chr15_63148092_-SINEAluAluJb
CAediting_1047580chr15_63148093_-SINEAluAluJb
CAediting_1047581chr15_63148866_-SINEAluAluSc
CAediting_1047582chr15_63148888_-SINEAluAluSc
CAediting_1047583chr15_63148894_-SINEAluAluSc
CAediting_1047584chr15_63148911_-SINEAluAluSc
CAediting_1047585chr15_63148935_-SINEAluAluSc
CAediting_1047586chr15_63148955_-SINEAluAluSc
CAediting_1047587chr15_63148970_-SINEAluAluSc
CAediting_1047588chr15_63148987_-SINEAluAluSc
CAediting_1047589chr15_63148991_-SINEAluAluSc
CAediting_1047590chr15_63148997_-SINEAluAluSc
CAediting_1047591chr15_63149023_-SINEAluAluSc
CAediting_1047592chr15_63149026_-SINEAluAluSc
CAediting_1047593chr15_63149027_-SINEAluAluSc
CAediting_1047594chr15_63149032_-SINEAluAluSc
CAediting_1047595chr15_63149035_-SINEAluAluSc
CAediting_1047596chr15_63149036_-SINEAluAluSc
CAediting_1047597chr15_63149037_-SINEAluAluSc
CAediting_1047598chr15_63149038_-SINEAluAluSc
CAediting_1047599chr15_63149052_-SINEAluAluSc
CAediting_1047600chr15_63149057_-SINEAluAluSc
CAediting_1047601chr15_63149060_-SINEAluAluSc
CAediting_1047602chr15_63149062_-SINEAluAluSc
CAediting_1047603chr15_63149063_-SINEAluAluSc
CAediting_1047604chr15_63149072_-SINEAluAluSc
CAediting_1047605chr15_63149075_-SINEAluAluSc
CAediting_1047606chr15_63149077_-SINEAluAluSc
CAediting_1047607chr15_63149092_-SINEAluAluSc
CAediting_1047608chr15_63149120_-SINEAluAluSc
CAediting_1047609chr15_63149126_-SINEAluAluSc
CAediting_1047610chr15_63149127_-SINEAluAluSc
CAediting_1047611chr15_63149374_-SINEAluAluY
CAediting_1047612chr15_63149396_-SINEAluAluY
CAediting_1047613chr15_63149399_-SINEAluAluY
CAediting_1047614chr15_63149410_-SINEAluAluY
CAediting_1047615chr15_63149445_-SINEAluAluY
CAediting_1047616chr15_63149450_-SINEAluAluY
CAediting_1047617chr15_63149455_-SINEAluAluY
CAediting_1047618chr15_63149467_-SINEAluAluY
CAediting_1047619chr15_63149480_-SINEAluAluY
CAediting_1047620chr15_63149485_-SINEAluAluY
CAediting_1047621chr15_63149504_-SINEAluAluY
CAediting_1047622chr15_63149510_-SINEAluAluY
CAediting_1047623chr15_63149515_-SINEAluAluY
CAediting_1047624chr15_63149520_-SINEAluAluY
CAediting_1047625chr15_63149521_-SINEAluAluY
CAediting_1047626chr15_63149534_-SINEAluAluY
CAediting_1047627chr15_63149807_-SINEAluAluSx3
CAediting_1047628chr15_63149814_-SINEAluAluSx3
CAediting_1047629chr15_63149816_-SINEAluAluSx3
CAediting_1047630chr15_63149828_-SINEAluAluSx3
CAediting_1047631chr15_63149829_-SINEAluAluSx3
CAediting_1047632chr15_63149838_-SINEAluAluSx3
CAediting_1047633chr15_63149843_-SINEAluAluSx3
CAediting_1047634chr15_63149881_-SINEAluAluSx3
CAediting_1047635chr15_63149890_-SINEAluAluSx3
CAediting_1047636chr15_63149916_-SINEAluAluSx3
CAediting_1047637chr15_63149925_-SINEAluAluSx3
CAediting_1047638chr15_63149926_-SINEAluAluSx3
CAediting_1047639chr15_63149934_-SINEAluAluSx3
CAediting_1047640chr15_63149939_-SINEAluAluSx3
CAediting_1047641chr15_63149946_-SINEAluAluSx3
CAediting_1047642chr15_63149950_-SINEAluAluSx3
CAediting_1047643chr15_63149952_-SINEAluAluSx3
CAediting_1047644chr15_63149955_-SINEAluAluSx3
CAediting_1047645chr15_63149962_-SINEAluAluSx3
CAediting_1047646chr15_63149974_-SINEAluAluSx3
CAediting_1047647chr15_63150020_-SINEAluAluSx3
CAediting_1047648chr15_63150025_-SINEAluAluSx3
CAediting_1047649chr15_63150039_-SINEAluAluSx3
CAediting_1047650chr15_63150074_-SINEAluAluSx3
CAediting_1047651chr15_63150081_-SINEAluAluSx3
CAediting_1047652chr15_63150085_-SINEAluAluSx3
CAediting_1047653chr15_63150089_-SINEAluAluSx3
CAediting_1047654chr15_63150325_-LINEL1L1MB7
CAediting_1047655chr15_63150370_-LINEL1L1MB7
CAediting_1047656chr15_63150377_-LINEL1L1MB7
CAediting_1047657chr15_63150391_-LINEL1L1MB7
CAediting_1047658chr15_63150392_-LINEL1L1MB7
CAediting_1047659chr15_63150451_-LINEL1L1MB7
CAediting_1047660chr15_63150469_-LINEL1L1MB7
CAediting_1047661chr15_63150670_-SINEAluAluY
CAediting_1047662chr15_63150676_-SINEAluAluY
CAediting_1047663chr15_63150703_-SINEAluAluY
CAediting_1047664chr15_63150708_-SINEAluAluY
CAediting_1047665chr15_63150717_-SINEAluAluY
CAediting_1047666chr15_63150805_-SINEAluAluY
CAediting_1047667chr15_63150824_-SINEAluAluY
CAediting_1047668chr15_63150866_-SINEAluAluY
CAediting_1047669chr15_63150912_-SINEAluAluY
CAediting_1047670chr15_63150913_-SINEAluAluY
CAediting_1047671chr15_63151269_-SINEAluAluSz
CAediting_1047672chr15_63151294_-SINEAluAluSz
CAediting_1047673chr15_63151299_-SINEAluAluSz
CAediting_1047674chr15_63151300_-SINEAluAluSz
CAediting_1047675chr15_63151301_-SINEAluAluSz
CAediting_1047676chr15_63151302_-SINEAluAluSz
CAediting_1047677chr15_63151310_-SINEAluAluSz
CAediting_1047678chr15_63151319_-SINEAluAluSz
CAediting_1047679chr15_63151339_-SINEAluAluSz
CAediting_1047680chr15_63151362_-SINEAluAluSz
CAediting_1047681chr15_63151366_-SINEAluAluSz
CAediting_1047682chr15_63151404_-SINEAluAluSz
CAediting_1047683chr15_63151476_-SINEAluAluSz
CAediting_1047684chr15_63151480_-SINEAluAluSz
CAediting_1047685chr15_63151490_-SINEAluAluSz
CAediting_1047686chr15_63151506_-SINEAluAluSz
CAediting_1047687chr15_63151507_-SINEAluAluSz
CAediting_1047688chr15_63151509_-SINEAluAluSz
CAediting_1047689chr15_63152045_-SINEAluAluJr
CAediting_1047690chr15_63152120_-SINEAluAluJr
CAediting_1047691chr15_63152141_-SINEAluAluJr
CAediting_1047692chr15_63152160_-SINEAluAluJr
CAediting_1047693chr15_63152162_-SINEAluAluJr
CAediting_1047694chr15_63152167_-SINEAluAluJr
CAediting_1047695chr15_63152184_-SINEAluAluJr
CAediting_1047696chr15_63152192_-SINEAluAluJr
CAediting_1047697chr15_63152193_-SINEAluAluJr
CAediting_1047698chr15_63152196_-SINEAluAluJr
CAediting_1047699chr15_63152227_-SINEAluAluJr
CAediting_1047700chr15_63152263_-SINEAluAluJr
CAediting_1047701chr15_63152265_-SINEAluAluJr
CAediting_1047702chr15_63152561_-SINEAluAluSp
CAediting_1047703chr15_63152562_-SINEAluAluSp
CAediting_1047704chr15_63152590_-SINEAluAluSp
CAediting_1047705chr15_63152591_-SINEAluAluSp
CAediting_1047706chr15_63152606_-SINEAluAluSp
CAediting_1047707chr15_63152624_-SINEAluAluSp
CAediting_1047708chr15_63152633_-SINEAluAluSp
CAediting_1047709chr15_63152634_-SINEAluAluSp
CAediting_1047710chr15_63152642_-SINEAluAluSp
CAediting_1047711chr15_63152660_-SINEAluAluSp
CAediting_1047712chr15_63152696_-SINEAluAluSp
CAediting_1047713chr15_63152699_-SINEAluAluSp
CAediting_1047714chr15_63152702_-SINEAluAluSp
CAediting_1047715chr15_63153577_-SINEAluAluSz6
CAediting_1047716chr15_63153590_-SINEAluAluSz6
CAediting_1047717chr15_63153595_-SINEAluAluSz6
CAediting_1047718chr15_63153601_-SINEAluAluSz6
CAediting_1047719chr15_63153603_-SINEAluAluSz6
CAediting_1047720chr15_63153613_-SINEAluAluSz6
CAediting_1047721chr15_63153616_-SINEAluAluSz6
CAediting_1047722chr15_63153617_-SINEAluAluSz6
CAediting_1047723chr15_63153639_-SINEAluAluSz6
CAediting_1047724chr15_63153643_-SINEAluAluSz6
CAediting_1047725chr15_63153649_-SINEAluAluSz6
CAediting_1047726chr15_63153662_-SINEAluAluSz6
CAediting_1047727chr15_63153663_-SINEAluAluSz6
CAediting_1047728chr15_63153668_-SINEAluAluSz6
CAediting_1047729chr15_63153678_-SINEAluAluSz6
CAediting_1047730chr15_63153687_-SINEAluAluSz6
CAediting_1047731chr15_63153703_-SINEAluAluSz6
CAediting_1047732chr15_63153719_-SINEAluAluSz6
CAediting_1047733chr15_63155099_-SINEAluAluSc8
CAediting_1047734chr15_63155140_-SINEAluAluSc8
CAediting_1047735chr15_63155150_-SINEAluAluSc8
CAediting_1047736chr15_63155180_-SINEAluAluSc8
CAediting_1047737chr15_63155236_-SINEAluAluSc8

Top

RNA A-to-I editing events in the alternative splicing sites for RPS27L

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000185088.11.RPS27L.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000185088.11.RPS27L.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for RPS27L

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
LGG.CAediting_1047602.ENSG00000185088.RPS27L.png
Soverview

Top

Protein coding region RNA A-to-I editings for RPS27L

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for RPS27L

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1047734chr15_63155140_-ENSG00000185088.11ENST00000439025hsa-miR-3157-5p63155139631551457mer-m86315513863155161164.00-24.56
CAediting_1047734chr15_63155140_-ENSG00000185088.11ENST00000439025hsa-miR-34a-3p63155137631551437mer-m86315513663155158155.00-11.29
CAediting_1047735chr15_63155150_-ENSG00000185088.11ENST00000439025hsa-miR-3622a-5p63155145631551517mer-m86315514463155165151.00-28.31
CAediting_1047736chr15_63155180_-ENSG00000185088.11ENST00000439025hsa-miR-6771-5p63155179631551857mer-m86315517863155198166.00-31.25
CAediting_1047737chr15_63155236_-ENSG00000185088.11ENST00000439025hsa-miR-453763155231631552388mer-1a6315523163155251154.00-25.95
CAediting_1047733chr15_63155099_-ENSG00000185088.11ENST00000439025hsa-miR-3190-5p63155094631551007mer-m86315509363155111148.00-20.60
CAediting_1047733chr15_63155099_-ENSG00000185088.11ENST00000439025hsa-miR-548s63155095631551017mer-m86315509463155116149.00-15.90

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1047736chr15_63155180_-ENSG00000185088.11ENST00000439025hsa-miR-1212663155176631551838mer-1a6315517663155199155-18.2
CAediting_1047736chr15_63155180_-ENSG00000185088.11ENST00000439025hsa-miR-1273h-5p63155179631551868mer-1a6315517963155199155-22.27
CAediting_1047733chr15_63155099_-ENSG00000185088.11ENST00000439025hsa-miR-3064-5p63155094631550996mer6315509363155113140-20.99
CAediting_1047736chr15_63155180_-ENSG00000185088.11ENST00000439025hsa-miR-30b-3p63155179631551868mer-1a6315517963155200155-18
CAediting_1047737chr15_63155236_-ENSG00000185088.11ENST00000439025hsa-miR-3160-3p63155231631552388mer-1a6315523163155252150-19.59
CAediting_1047737chr15_63155236_-ENSG00000185088.11ENST00000439025hsa-miR-3160-3p63155231631552388mer-1a6315523163155252150-19.59
CAediting_1047735chr15_63155150_-ENSG00000185088.11ENST00000439025hsa-miR-3622b-5p63155146631551527mer-m86315514563155162142-24.4
CAediting_1047736chr15_63155180_-ENSG00000185088.11ENST00000439025hsa-miR-3689a-3p63155179631551868mer-1a6315517963155199143-14.84
CAediting_1047736chr15_63155180_-ENSG00000185088.11ENST00000439025hsa-miR-3689b-3p63155179631551868mer-1a6315517963155199143-14.01
CAediting_1047736chr15_63155180_-ENSG00000185088.11ENST00000439025hsa-miR-3689c63155179631551868mer-1a6315517963155199143-14.01
CAediting_1047733chr15_63155099_-ENSG00000185088.11ENST00000439025hsa-miR-664a-5p63155094631551007mer-m86315509363155115148-14.11
CAediting_1047736chr15_63155180_-ENSG00000185088.11ENST00000439025hsa-miR-6779-5p63155179631551868mer-1a6315517963155199142-18.89
CAediting_1047736chr15_63155180_-ENSG00000185088.11ENST00000439025hsa-miR-887-5p63155179631551857mer-m86315517863155198142-15.5

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229414chr17_67471546_+ENSG00000185088.11ENST00000439025hsa-miR-548aa63155085631550917mer-m86315508463155108146-12.69

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for RPS27L

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for RPS27L

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

Top

Relation with cancer stages for RPS27L

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

Top

Relation with survival for RPS27L

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

Top

RelatedDrugs for RPS27L

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for RPS27L

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource