![]() |
||||||
|
![]() | |
![]() | |
![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
![]() | |
![]() | |
![]() | The effects of the RNA editing to the stability of the RNA structures |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Editing gene: GLOD4 (CAeditome ID:51031) |
Gene summary for GLOD4 |
![]() |
Gene information | Gene symbol | GLOD4 | Gene ID | 51031 |
Gene name | glyoxalase domain containing 4 | |
Synonyms | C17orf25|CGI-150|HC71 | |
Cytomap | 17p13.3 | |
Type of gene | protein-coding | |
Description | glyoxalase domain-containing protein 4 | |
Modification date | 20210518 | |
UniProtAcc | Q9HC38 | |
Context |
![]() |
Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for GLOD4 |
![]() |
![]() |
![]() |
![]() |
CAediting_1147767(765585, -), CAediting_1147768(765586, -), CAediting_1147769(765604, -), CAediting_1147770(765827, -), CAediting_1147771(766496, -), CAediting_1147772(766655, -), CAediting_1147773(766734, -), CAediting_1147774(777369, -), CAediting_1147775(777437, -), CAediting_1147776(777476, -), CAediting_1147777(777493, -), CAediting_1147778(777498, -), CAediting_1147779(777504, -), CAediting_1147780(779070, -), CAediting_1147781(779085, -), CAediting_1147782(779094, -), CAediting_1147783(779152, -), CAediting_1147784(779158, -), CAediting_1147785(779190, -), CAediting_1147786(779467, -), CAediting_1147787(779513, -), CAediting_1147788(779516, -), CAediting_1147789(779543, -), CAediting_1147790(779592, -), CAediting_1147791(780052, -), CAediting_1147792(780118, -), CAediting_1147793(780551, -), CAediting_1147794(780611, -), CAediting_1147795(780621, -), CAediting_1147796(780696, -), CAediting_1147797(780710, -), CAediting_1147798(780926, -), CAediting_1147799(780927, -), CAediting_1147800(780948, -), CAediting_1147801(780988, -), CAediting_1147802(781031, -), CAediting_1147803(781049, -), CAediting_1147804(781058, -), CAediting_1147805(781059, -), CAediting_1147806(781067, -), CAediting_1147807(781069, -), CAediting_1147808(781089, -), CAediting_1147809(781099, -), CAediting_1147810(781100, -), CAediting_1147811(781124, -), CAediting_1147812(781125, -), CAediting_1147813(781171, -), CAediting_1147814(781193, -), CAediting_1147815(781194, -), |
Top |
RNA editing positional annotations for GLOD4 using Annovar |
![]() |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
![]() |
CAeditome ID | Position | Variant type |
CAediting_1147767 | chr17_765585_- | ncRNA_intronic |
CAediting_1147768 | chr17_765586_- | ncRNA_intronic |
CAediting_1147769 | chr17_765604_- | ncRNA_intronic |
CAediting_1147770 | chr17_765827_- | ncRNA_intronic |
CAediting_1147771 | chr17_766496_- | ncRNA_intronic |
CAediting_1147772 | chr17_766655_- | ncRNA_intronic |
CAediting_1147773 | chr17_766734_- | ncRNA_intronic |
CAediting_1147774 | chr17_777369_- | ncRNA_exonic |
CAediting_1147775 | chr17_777437_- | ncRNA_exonic |
CAediting_1147776 | chr17_777476_- | ncRNA_exonic |
CAediting_1147777 | chr17_777493_- | ncRNA_exonic |
CAediting_1147778 | chr17_777498_- | ncRNA_exonic |
CAediting_1147779 | chr17_777504_- | ncRNA_exonic |
CAediting_1147780 | chr17_779070_- | ncRNA_intronic |
CAediting_1147781 | chr17_779085_- | ncRNA_intronic |
CAediting_1147782 | chr17_779094_- | ncRNA_intronic |
CAediting_1147783 | chr17_779152_- | ncRNA_intronic |
CAediting_1147784 | chr17_779158_- | ncRNA_intronic |
CAediting_1147785 | chr17_779190_- | ncRNA_intronic |
CAediting_1147786 | chr17_779467_- | ncRNA_intronic |
CAediting_1147787 | chr17_779513_- | ncRNA_intronic |
CAediting_1147788 | chr17_779516_- | ncRNA_intronic |
CAediting_1147789 | chr17_779543_- | ncRNA_intronic |
CAediting_1147790 | chr17_779592_- | ncRNA_intronic |
CAediting_1147791 | chr17_780052_- | ncRNA_intronic |
CAediting_1147792 | chr17_780118_- | ncRNA_intronic |
CAediting_1147793 | chr17_780551_- | ncRNA_intronic |
CAediting_1147794 | chr17_780611_- | ncRNA_intronic |
CAediting_1147795 | chr17_780621_- | ncRNA_exonic |
CAediting_1147796 | chr17_780696_- | exonic |
CAediting_1147797 | chr17_780710_- | exonic |
CAediting_1147798 | chr17_780926_- | ncRNA_intronic |
CAediting_1147799 | chr17_780927_- | ncRNA_intronic |
CAediting_1147800 | chr17_780948_- | ncRNA_intronic |
CAediting_1147801 | chr17_780988_- | ncRNA_intronic |
CAediting_1147802 | chr17_781031_- | ncRNA_intronic |
CAediting_1147803 | chr17_781049_- | ncRNA_intronic |
CAediting_1147804 | chr17_781058_- | ncRNA_intronic |
CAediting_1147805 | chr17_781059_- | ncRNA_intronic |
CAediting_1147806 | chr17_781067_- | ncRNA_intronic |
CAediting_1147807 | chr17_781069_- | ncRNA_intronic |
CAediting_1147808 | chr17_781089_- | ncRNA_intronic |
CAediting_1147809 | chr17_781099_- | ncRNA_intronic |
CAediting_1147810 | chr17_781100_- | ncRNA_intronic |
CAediting_1147811 | chr17_781124_- | ncRNA_intronic |
CAediting_1147812 | chr17_781125_- | ncRNA_intronic |
CAediting_1147813 | chr17_781171_- | ncRNA_intronic |
CAediting_1147814 | chr17_781193_- | ncRNA_intronic |
CAediting_1147815 | chr17_781194_- | ncRNA_intronic |
![]() |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1147767 | chr17_765585_- | SINE | Alu | AluSx |
CAediting_1147768 | chr17_765586_- | SINE | Alu | AluSx |
CAediting_1147769 | chr17_765604_- | SINE | Alu | AluSx |
CAediting_1147770 | chr17_765827_- | SINE | Alu | AluSx |
CAediting_1147771 | chr17_766496_- | SINE | Alu | AluSx |
CAediting_1147772 | chr17_766655_- | SINE | Alu | AluSz6 |
CAediting_1147773 | chr17_766734_- | SINE | Alu | AluSz6 |
CAediting_1147774 | chr17_777369_- | SINE | Alu | AluSx |
CAediting_1147775 | chr17_777437_- | SINE | Alu | AluSx |
CAediting_1147776 | chr17_777476_- | SINE | Alu | AluSx |
CAediting_1147777 | chr17_777493_- | SINE | Alu | AluSx |
CAediting_1147778 | chr17_777498_- | SINE | Alu | AluSx |
CAediting_1147779 | chr17_777504_- | SINE | Alu | AluSx |
CAediting_1147780 | chr17_779070_- | SINE | Alu | AluSq2 |
CAediting_1147781 | chr17_779085_- | SINE | Alu | AluSq2 |
CAediting_1147782 | chr17_779094_- | SINE | Alu | AluSq2 |
CAediting_1147783 | chr17_779152_- | SINE | Alu | AluSq2 |
CAediting_1147784 | chr17_779158_- | SINE | Alu | AluSq2 |
CAediting_1147785 | chr17_779190_- | SINE | Alu | AluSq2 |
CAediting_1147786 | chr17_779467_- | SINE | Alu | AluSq2 |
CAediting_1147787 | chr17_779513_- | SINE | Alu | AluSq2 |
CAediting_1147788 | chr17_779516_- | SINE | Alu | AluSq2 |
CAediting_1147789 | chr17_779543_- | SINE | Alu | AluSq2 |
CAediting_1147790 | chr17_779592_- | SINE | Alu | AluSq2 |
CAediting_1147791 | chr17_780052_- | SINE | Alu | AluY |
CAediting_1147792 | chr17_780118_- | SINE | Alu | AluY |
CAediting_1147793 | chr17_780551_- | SINE | Alu | AluY |
CAediting_1147794 | chr17_780611_- | SINE | Alu | AluY |
CAediting_1147795 | chr17_780621_- | SINE | Alu | AluY |
CAediting_1147796 | chr17_780696_- | SINE | Alu | AluY |
CAediting_1147797 | chr17_780710_- | SINE | Alu | AluY |
CAediting_1147798 | chr17_780926_- | SINE | Alu | AluSq2 |
CAediting_1147799 | chr17_780927_- | SINE | Alu | AluSq2 |
CAediting_1147800 | chr17_780948_- | SINE | Alu | AluSq2 |
CAediting_1147801 | chr17_780988_- | SINE | Alu | AluSq2 |
CAediting_1147802 | chr17_781031_- | SINE | Alu | AluSq2 |
CAediting_1147803 | chr17_781049_- | SINE | Alu | AluSq2 |
CAediting_1147804 | chr17_781058_- | SINE | Alu | AluSq2 |
CAediting_1147805 | chr17_781059_- | SINE | Alu | AluSq2 |
CAediting_1147806 | chr17_781067_- | SINE | Alu | AluSq2 |
CAediting_1147807 | chr17_781069_- | SINE | Alu | AluSq2 |
CAediting_1147808 | chr17_781089_- | SINE | Alu | AluSq2 |
CAediting_1147809 | chr17_781099_- | SINE | Alu | AluSq2 |
CAediting_1147810 | chr17_781100_- | SINE | Alu | AluSq2 |
CAediting_1147811 | chr17_781124_- | SINE | Alu | AluSq2 |
CAediting_1147812 | chr17_781125_- | SINE | Alu | AluSq2 |
CAediting_1147813 | chr17_781171_- | SINE | Alu | AluSq2 |
CAediting_1147814 | chr17_781193_- | SINE | Alu | AluSq2 |
CAediting_1147815 | chr17_781194_- | SINE | Alu | AluSq2 |
Top |
RNA A-to-I editing events in the alternative splicing sites for GLOD4 |
![]() |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
ES | CAediting_1147794 | chr17_780611_- | 780611:780619 | 5SS | 0+6i | AGGCGCGTA | -23.95 | AGGCGCGTG | -24.6 |
![]() |
![]() |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for GLOD4 |
![]() * The grey color means N/A. |
![]() |
![]() * Click on the image to enlarge it in a new window. |
Top |
Protein coding region RNA A-to-I editings for GLOD4 |
![]() * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for GLOD4 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_688080 | chr9_63819626_+ | ENSG00000167699.12 | ENST00000575528 | hsa-miR-4477b | 770159 | 770165 | 7mer-m8 | 770158 | 770179 | 144 | -8.54 |
CAediting_1054808 | chr15_66496985_- | ENSG00000167699.12 | ENST00000574554 | hsa-miR-4512 | 775822 | 775828 | 7mer-m8 | 775821 | 775840 | 147 | -24.43 |
CAediting_396018 | chr5_1062918_- | ENSG00000167699.12 | ENST00000575528 | hsa-miR-4635 | 770158 | 770164 | 7mer-m8 | 770157 | 770175 | 148 | -16.07 |
CAediting_1054808 | chr15_66496985_- | ENSG00000167699.12 | ENST00000575851 | hsa-miR-4512 | 775822 | 775828 | 7mer-m8 | 775821 | 775840 | 147 | -24.43 |
CAediting_1054808 | chr15_66496985_- | ENSG00000167699.12 | ENST00000575790 | hsa-miR-4512 | 775822 | 775828 | 7mer-m8 | 775821 | 775840 | 147 | -24.43 |
CAediting_1054808 | chr15_66496985_- | ENSG00000167699.12 | ENST00000574581 | hsa-miR-4512 | 775822 | 775828 | 7mer-m8 | 775821 | 775840 | 147 | -24.43 |
CAediting_1054808 | chr15_66496985_- | ENSG00000167699.12 | ENST00000572220 | hsa-miR-4512 | 775822 | 775828 | 7mer-m8 | 775821 | 775840 | 147 | -24.43 |
CAediting_77128 | chr1_85133844_+ | ENSG00000167699.12 | ENST00000576670 | hsa-miR-4423-3p | 781944 | 781950 | 7mer-m8 | 781943 | 781963 | 140 | -12.82 |
![]() |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
![]() |
Top |
The effects of the RNA editing to the stability of the RNA structures for GLOD4 |
![]() * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
![]() |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for GLOD4 |
![]() |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
Top |
Relation with cancer stages for GLOD4 |
![]() |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
Top |
Relation with survival for GLOD4 |
![]() |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
Top |
RelatedDrugs for GLOD4 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for GLOD4 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |