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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ASCC1 (CAeditome ID:51008)

Gene summary for ASCC1

check button Gene summary
Gene informationGene symbol

ASCC1

Gene ID

51008

Gene nameactivating signal cointegrator 1 complex subunit 1
SynonymsASC1p50|CGI-18|SMABF2|p50
Cytomap

10q22.1

Type of geneprotein-coding
Descriptionactivating signal cointegrator 1 complex subunit 1ASC-1 complex subunit P50trip4 complex subunit p50
Modification date20210518
UniProtAcc

Q8N9N2

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
ASCC1

GO:0006355

Activating signal cointegrator 1 complex subunit 1

12077347

ASCC1

GO:0005634

Activating signal cointegrator 1 complex subunit 1

12077347

ASCC1

GO:0005634

Activating signal cointegrator 1 complex subunit 1

26924529

ASCC1

GO:0005667

Activating signal cointegrator 1 complex subunit 1

12077347


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RNA A-to-I events for ASCC1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000138303.16

check button RNA A-to-I editing events in Cancer.
CAediting_757323(72096843, -), CAediting_757324(72102853, -), CAediting_757325(72102863, -), CAediting_757326(72102893, -), CAediting_757327(72102939, -), CAediting_757328(72108215, -), CAediting_757329(72108221, -), CAediting_757330(72108233, -), CAediting_757331(72108237, -), CAediting_757332(72108241, -), CAediting_757333(72108245, -), CAediting_757334(72108273, -), CAediting_757335(72108301, -), CAediting_757336(72108304, -), CAediting_757337(72108323, -), CAediting_757338(72108349, -), CAediting_757339(72111243, -), CAediting_757340(72111342, -), CAediting_757341(72111346, -), CAediting_757342(72116843, -), CAediting_757343(72116849, -), CAediting_757344(72121222, -), CAediting_757345(72130815, -), CAediting_757346(72131253, -), CAediting_757347(72131275, -), CAediting_757348(72131284, -), CAediting_757349(72131307, -), CAediting_757350(72131336, -), CAediting_757351(72131337, -), CAediting_757352(72131417, -), CAediting_757353(72131418, -), CAediting_757354(72131916, -), CAediting_757355(72131947, -), CAediting_757356(72131966, -), CAediting_757357(72131979, -), CAediting_757358(72132033, -), CAediting_757359(72132037, -), CAediting_757360(72132040, -), CAediting_757361(72132042, -), CAediting_757362(72132087, -), CAediting_757363(72134046, -), CAediting_757364(72134585, -), CAediting_757365(72134598, -), CAediting_757366(72134605, -), CAediting_757367(72134612, -), CAediting_757368(72134675, -), CAediting_757369(72134715, -), CAediting_757370(72135798, -), CAediting_757371(72135972, -), CAediting_757372(72135973, -), CAediting_757373(72137950, -), CAediting_757374(72138002, -), CAediting_757375(72138033, -), CAediting_757376(72138044, -), CAediting_757377(72138060, -), CAediting_757378(72138061, -), CAediting_757379(72138736, -), CAediting_757380(72138742, -), CAediting_757381(72139252, -), CAediting_757382(72139295, -), CAediting_757383(72139388, -), CAediting_757384(72142646, -), CAediting_757385(72144114, -), CAediting_757386(72157074, -), CAediting_757387(72164852, -), CAediting_757388(72167774, -), CAediting_757389(72167820, -), CAediting_757390(72183563, -), CAediting_757391(72187870, -), CAediting_757392(72188208, -), CAediting_757393(72188256, -), CAediting_757394(72188257, -), CAediting_757395(72188895, -), CAediting_757396(72189726, -), CAediting_757397(72191811, -), CAediting_757398(72191816, -), CAediting_757399(72191826, -), CAediting_757400(72191827, -), CAediting_757401(72191830, -), CAediting_757402(72191842, -), CAediting_757403(72191843, -), CAediting_757404(72191852, -), CAediting_757405(72191861, -), CAediting_757406(72191866, -), CAediting_757407(72195021, -), CAediting_757408(72195176, -), CAediting_757409(72195244, -), CAediting_757410(72195252, -), CAediting_757411(72195284, -), CAediting_757412(72195299, -), CAediting_757413(72195306, -), CAediting_757414(72195310, -), CAediting_757415(72195313, -), CAediting_757416(72195315, -), CAediting_757417(72195316, -), CAediting_757418(72195339, -), CAediting_757419(72195348, -), CAediting_757420(72195722, -), CAediting_757421(72195751, -), CAediting_757422(72195752, -), CAediting_757423(72196355, -), CAediting_757424(72196394, -), CAediting_757425(72196400, -), CAediting_757426(72196407, -), CAediting_757427(72196411, -), CAediting_757428(72196443, -), CAediting_757429(72198945, -), CAediting_757430(72198981, -), CAediting_757431(72198995, -), CAediting_757432(72199010, -), CAediting_757433(72199011, -), CAediting_757434(72199018, -), CAediting_757435(72199020, -), CAediting_757436(72199043, -), CAediting_757437(72199087, -), CAediting_757438(72199088, -), CAediting_757439(72199094, -), CAediting_757440(72199262, -), CAediting_757441(72199426, -), CAediting_757442(72199435, -), CAediting_757443(72199442, -), CAediting_757444(72199501, -), CAediting_757445(72199525, -), CAediting_757446(72199568, -), CAediting_757447(72199569, -), CAediting_757448(72199591, -), CAediting_757449(72199853, -), CAediting_757450(72199860, -), CAediting_757451(72199864, -), CAediting_757452(72199870, -), CAediting_757453(72199927, -), CAediting_757454(72199936, -), CAediting_757455(72199937, -), CAediting_757456(72199952, -), CAediting_757457(72199960, -), CAediting_757458(72199970, -), CAediting_757459(72199983, -), CAediting_757460(72200005, -), CAediting_757461(72200014, -), CAediting_757462(72200457, -), CAediting_757463(72200483, -), CAediting_757464(72200486, -), CAediting_757465(72200536, -), CAediting_757466(72200540, -), CAediting_757467(72200548, -), CAediting_757468(72201250, -), CAediting_757469(72201304, -), CAediting_757470(72201655, -), CAediting_757471(72201900, -), CAediting_757472(72207292, -), CAediting_757473(72207302, -), CAediting_757474(72207890, -), CAediting_757475(72207901, -), CAediting_757476(72207940, -), CAediting_757477(72208109, -), CAediting_757478(72208946, -), CAediting_757479(72208947, -), CAediting_757480(72208979, -), CAediting_757481(72208992, -), CAediting_757482(72209103, -), CAediting_757483(72209127, -), CAediting_757484(72209451, -), CAediting_757485(72210308, -), CAediting_757486(72210324, -), CAediting_757487(72210327, -), CAediting_757488(72210333, -), CAediting_757489(72213916, -), CAediting_757490(72213926, -), CAediting_757491(72214448, -), CAediting_757492(72214452, -), CAediting_757493(72214461, -), CAediting_757494(72214474, -), CAediting_757495(72214497, -), CAediting_757496(72214505, -), CAediting_757497(72214508, -), CAediting_757498(72214513, -), CAediting_757499(72214514, -), CAediting_757500(72214540, -), CAediting_757501(72214550, -), CAediting_757502(72214570, -), CAediting_757503(72214572, -), CAediting_757504(72214580, -), CAediting_757505(72215323, -),

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RNA editing positional annotations for ASCC1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_757324chr10_72102853_-nonsynonymous SNVENST00000342444.7c.A1156Gp.T386ADBN
CAediting_757324chr10_72102853_-nonsynonymous SNVENST00000394915.6c.A1156Gp.T386ADBN

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_757323chr10_72096843_-ncRNA_exonic
CAediting_757324chr10_72102853_-exonic
CAediting_757325chr10_72102863_-exonic
CAediting_757326chr10_72102893_-exonic
CAediting_757327chr10_72102939_-exonic
CAediting_757328chr10_72108215_-ncRNA_intronic
CAediting_757329chr10_72108221_-ncRNA_intronic
CAediting_757330chr10_72108233_-ncRNA_intronic
CAediting_757331chr10_72108237_-ncRNA_intronic
CAediting_757332chr10_72108241_-ncRNA_intronic
CAediting_757333chr10_72108245_-ncRNA_intronic
CAediting_757334chr10_72108273_-ncRNA_intronic
CAediting_757335chr10_72108301_-ncRNA_intronic
CAediting_757336chr10_72108304_-ncRNA_intronic
CAediting_757337chr10_72108323_-ncRNA_intronic
CAediting_757338chr10_72108349_-ncRNA_intronic
CAediting_757339chr10_72111243_-ncRNA_intronic
CAediting_757340chr10_72111342_-ncRNA_intronic
CAediting_757341chr10_72111346_-ncRNA_intronic
CAediting_757342chr10_72116843_-ncRNA_intronic
CAediting_757343chr10_72116849_-ncRNA_intronic
CAediting_757344chr10_72121222_-ncRNA_intronic
CAediting_757345chr10_72130815_-ncRNA_intronic
CAediting_757346chr10_72131253_-ncRNA_intronic
CAediting_757347chr10_72131275_-ncRNA_intronic
CAediting_757348chr10_72131284_-ncRNA_intronic
CAediting_757349chr10_72131307_-ncRNA_intronic
CAediting_757350chr10_72131336_-ncRNA_intronic
CAediting_757351chr10_72131337_-ncRNA_intronic
CAediting_757352chr10_72131417_-ncRNA_intronic
CAediting_757353chr10_72131418_-ncRNA_intronic
CAediting_757354chr10_72131916_-ncRNA_intronic
CAediting_757355chr10_72131947_-ncRNA_intronic
CAediting_757356chr10_72131966_-ncRNA_intronic
CAediting_757357chr10_72131979_-ncRNA_intronic
CAediting_757358chr10_72132033_-ncRNA_intronic
CAediting_757359chr10_72132037_-ncRNA_intronic
CAediting_757360chr10_72132040_-ncRNA_intronic
CAediting_757361chr10_72132042_-ncRNA_intronic
CAediting_757362chr10_72132087_-ncRNA_intronic
CAediting_757363chr10_72134046_-ncRNA_exonic
CAediting_757364chr10_72134585_-intronic
CAediting_757365chr10_72134598_-intronic
CAediting_757366chr10_72134605_-intronic
CAediting_757367chr10_72134612_-intronic
CAediting_757368chr10_72134675_-intronic
CAediting_757369chr10_72134715_-intronic
CAediting_757370chr10_72135798_-intronic
CAediting_757371chr10_72135972_-intronic
CAediting_757372chr10_72135973_-intronic
CAediting_757373chr10_72137950_-intronic
CAediting_757374chr10_72138002_-intronic
CAediting_757375chr10_72138033_-intronic
CAediting_757376chr10_72138044_-intronic
CAediting_757377chr10_72138060_-intronic
CAediting_757378chr10_72138061_-intronic
CAediting_757379chr10_72138736_-intronic
CAediting_757380chr10_72138742_-intronic
CAediting_757381chr10_72139252_-intronic
CAediting_757382chr10_72139295_-intronic
CAediting_757383chr10_72139388_-intronic
CAediting_757384chr10_72142646_-intronic
CAediting_757385chr10_72144114_-intronic
CAediting_757386chr10_72157074_-ncRNA_intronic
CAediting_757387chr10_72164852_-intronic
CAediting_757388chr10_72167774_-intronic
CAediting_757389chr10_72167820_-intronic
CAediting_757390chr10_72183563_-intronic
CAediting_757391chr10_72187870_-intronic
CAediting_757392chr10_72188208_-intronic
CAediting_757393chr10_72188256_-intronic
CAediting_757394chr10_72188257_-intronic
CAediting_757395chr10_72188895_-intronic
CAediting_757396chr10_72189726_-intronic
CAediting_757397chr10_72191811_-intronic
CAediting_757398chr10_72191816_-intronic
CAediting_757399chr10_72191826_-intronic
CAediting_757400chr10_72191827_-intronic
CAediting_757401chr10_72191830_-intronic
CAediting_757402chr10_72191842_-intronic
CAediting_757403chr10_72191843_-intronic
CAediting_757404chr10_72191852_-intronic
CAediting_757405chr10_72191861_-intronic
CAediting_757406chr10_72191866_-intronic
CAediting_757407chr10_72195021_-intronic
CAediting_757408chr10_72195176_-intronic
CAediting_757409chr10_72195244_-intronic
CAediting_757410chr10_72195252_-intronic
CAediting_757411chr10_72195284_-intronic
CAediting_757412chr10_72195299_-intronic
CAediting_757413chr10_72195306_-intronic
CAediting_757414chr10_72195310_-intronic
CAediting_757415chr10_72195313_-intronic
CAediting_757416chr10_72195315_-intronic
CAediting_757417chr10_72195316_-intronic
CAediting_757418chr10_72195339_-intronic
CAediting_757419chr10_72195348_-intronic
CAediting_757420chr10_72195722_-intronic
CAediting_757421chr10_72195751_-intronic
CAediting_757422chr10_72195752_-intronic
CAediting_757423chr10_72196355_-intronic
CAediting_757424chr10_72196394_-intronic
CAediting_757425chr10_72196400_-intronic
CAediting_757426chr10_72196407_-intronic
CAediting_757427chr10_72196411_-intronic
CAediting_757428chr10_72196443_-intronic
CAediting_757429chr10_72198945_-intronic
CAediting_757430chr10_72198981_-intronic
CAediting_757431chr10_72198995_-intronic
CAediting_757432chr10_72199010_-intronic
CAediting_757433chr10_72199011_-intronic
CAediting_757434chr10_72199018_-intronic
CAediting_757435chr10_72199020_-intronic
CAediting_757436chr10_72199043_-intronic
CAediting_757437chr10_72199087_-intronic
CAediting_757438chr10_72199088_-intronic
CAediting_757439chr10_72199094_-intronic
CAediting_757440chr10_72199262_-intronic
CAediting_757441chr10_72199426_-intronic
CAediting_757442chr10_72199435_-intronic
CAediting_757443chr10_72199442_-intronic
CAediting_757444chr10_72199501_-intronic
CAediting_757445chr10_72199525_-intronic
CAediting_757446chr10_72199568_-intronic
CAediting_757447chr10_72199569_-intronic
CAediting_757448chr10_72199591_-intronic
CAediting_757449chr10_72199853_-intronic
CAediting_757450chr10_72199860_-intronic
CAediting_757451chr10_72199864_-intronic
CAediting_757452chr10_72199870_-intronic
CAediting_757453chr10_72199927_-intronic
CAediting_757454chr10_72199936_-intronic
CAediting_757455chr10_72199937_-intronic
CAediting_757456chr10_72199952_-intronic
CAediting_757457chr10_72199960_-intronic
CAediting_757458chr10_72199970_-intronic
CAediting_757459chr10_72199983_-intronic
CAediting_757460chr10_72200005_-intronic
CAediting_757461chr10_72200014_-intronic
CAediting_757462chr10_72200457_-intronic
CAediting_757463chr10_72200483_-intronic
CAediting_757464chr10_72200486_-intronic
CAediting_757465chr10_72200536_-intronic
CAediting_757466chr10_72200540_-intronic
CAediting_757467chr10_72200548_-intronic
CAediting_757468chr10_72201250_-intronic
CAediting_757469chr10_72201304_-intronic
CAediting_757470chr10_72201655_-intronic
CAediting_757471chr10_72201900_-intronic
CAediting_757472chr10_72207292_-ncRNA_intronic
CAediting_757473chr10_72207302_-ncRNA_intronic
CAediting_757474chr10_72207890_-ncRNA_intronic
CAediting_757475chr10_72207901_-ncRNA_intronic
CAediting_757476chr10_72207940_-ncRNA_intronic
CAediting_757477chr10_72208109_-ncRNA_intronic
CAediting_757478chr10_72208946_-ncRNA_intronic
CAediting_757479chr10_72208947_-ncRNA_intronic
CAediting_757480chr10_72208979_-ncRNA_intronic
CAediting_757481chr10_72208992_-ncRNA_intronic
CAediting_757482chr10_72209103_-ncRNA_intronic
CAediting_757483chr10_72209127_-ncRNA_intronic
CAediting_757484chr10_72209451_-ncRNA_intronic
CAediting_757485chr10_72210308_-ncRNA_intronic
CAediting_757486chr10_72210324_-ncRNA_intronic
CAediting_757487chr10_72210327_-ncRNA_intronic
CAediting_757488chr10_72210333_-ncRNA_intronic
CAediting_757489chr10_72213916_-ncRNA_intronic
CAediting_757490chr10_72213926_-ncRNA_intronic
CAediting_757491chr10_72214448_-ncRNA_intronic
CAediting_757492chr10_72214452_-ncRNA_intronic
CAediting_757493chr10_72214461_-ncRNA_intronic
CAediting_757494chr10_72214474_-ncRNA_intronic
CAediting_757495chr10_72214497_-ncRNA_intronic
CAediting_757496chr10_72214505_-ncRNA_intronic
CAediting_757497chr10_72214508_-ncRNA_intronic
CAediting_757498chr10_72214513_-ncRNA_intronic
CAediting_757499chr10_72214514_-ncRNA_intronic
CAediting_757500chr10_72214540_-ncRNA_intronic
CAediting_757501chr10_72214550_-ncRNA_intronic
CAediting_757502chr10_72214570_-ncRNA_intronic
CAediting_757503chr10_72214572_-ncRNA_intronic
CAediting_757504chr10_72214580_-ncRNA_intronic
CAediting_757505chr10_72215323_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_757323chr10_72096843_-LINEL1L1MB3
CAediting_757324chr10_72102853_-SINEAluAluSq2
CAediting_757325chr10_72102863_-SINEAluAluSq2
CAediting_757326chr10_72102893_-SINEAluAluSq2
CAediting_757327chr10_72102939_-SINEAluAluSq2
CAediting_757328chr10_72108215_-SINEAluAluJb
CAediting_757329chr10_72108221_-SINEAluAluJb
CAediting_757330chr10_72108233_-SINEAluAluJb
CAediting_757331chr10_72108237_-SINEAluAluJb
CAediting_757332chr10_72108241_-SINEAluAluJb
CAediting_757333chr10_72108245_-SINEAluAluJb
CAediting_757334chr10_72108273_-SINEAluAluJb
CAediting_757335chr10_72108301_-SINEAluAluJb
CAediting_757336chr10_72108304_-SINEAluAluJb
CAediting_757337chr10_72108323_-SINEAluAluJb
CAediting_757338chr10_72108349_-SINEAluAluJb
CAediting_757339chr10_72111243_-SINEAluAluJb
CAediting_757340chr10_72111342_-SINEAluAluJb
CAediting_757341chr10_72111346_-SINEAluAluJb
CAediting_757342chr10_72116843_-SINEAluAluJo
CAediting_757343chr10_72116849_-SINEAluAluJo
CAediting_757344chr10_72121222_-SINEAluAluJr
CAediting_757345chr10_72130815_-DNAhAT-CharlieMER3
CAediting_757346chr10_72131253_-SINEAluAluSg4
CAediting_757347chr10_72131275_-SINEAluAluSg4
CAediting_757348chr10_72131284_-SINEAluAluSg4
CAediting_757349chr10_72131307_-SINEAluAluSg4
CAediting_757350chr10_72131336_-SINEAluAluSg4
CAediting_757351chr10_72131337_-SINEAluAluSg4
CAediting_757352chr10_72131417_-SINEAluAluSg4
CAediting_757353chr10_72131418_-SINEAluAluSg4
CAediting_757354chr10_72131916_-SINEAluAluSz
CAediting_757355chr10_72131947_-SINEAluAluSz
CAediting_757356chr10_72131966_-SINEAluAluSz
CAediting_757357chr10_72131979_-SINEAluAluSz
CAediting_757358chr10_72132033_-SINEAluAluSz
CAediting_757359chr10_72132037_-SINEAluAluSz
CAediting_757360chr10_72132040_-SINEAluAluSz
CAediting_757361chr10_72132042_-SINEAluAluSz
CAediting_757362chr10_72132087_-SINEAluAluSz
CAediting_757363chr10_72134046_-SINEAluAluSz
CAediting_757373chr10_72137950_-SINEAluAluSz6
CAediting_757374chr10_72138002_-SINEAluAluSz6
CAediting_757375chr10_72138033_-SINEAluAluSz6
CAediting_757376chr10_72138044_-SINEAluAluSz6
CAediting_757377chr10_72138060_-SINEAluAluSz6
CAediting_757378chr10_72138061_-SINEAluAluSz6
CAediting_757379chr10_72138736_-SINEAluAluSx1
CAediting_757380chr10_72138742_-SINEAluAluSx1
CAediting_757381chr10_72139252_-SINEAluAluSc8
CAediting_757382chr10_72139295_-SINEAluAluSc8
CAediting_757383chr10_72139388_-SINEAluAluSc8
CAediting_757384chr10_72142646_-SINEAluAluSx
CAediting_757385chr10_72144114_-SINEAluAluSg7
CAediting_757386chr10_72157074_-SINEAluAluJo
CAediting_757387chr10_72164852_-LINEL1L1MB5
CAediting_757388chr10_72167774_-SINEAluAluJr
CAediting_757389chr10_72167820_-SINEAluAluJr
CAediting_757390chr10_72183563_-SINEAluAluJo
CAediting_757391chr10_72187870_-SINEAluAluY
CAediting_757392chr10_72188208_-SINEAluAluSz
CAediting_757393chr10_72188256_-SINEAluAluSz
CAediting_757394chr10_72188257_-SINEAluAluSz
CAediting_757395chr10_72188895_-SINEAluAluJo
CAediting_757396chr10_72189726_-SINEAluAluSp
CAediting_757397chr10_72191811_-SINEAluAluSq2
CAediting_757398chr10_72191816_-SINEAluAluSq2
CAediting_757399chr10_72191826_-SINEAluAluSq2
CAediting_757400chr10_72191827_-SINEAluAluSq2
CAediting_757401chr10_72191830_-SINEAluAluSq2
CAediting_757402chr10_72191842_-SINEAluAluSq2
CAediting_757403chr10_72191843_-SINEAluAluSq2
CAediting_757404chr10_72191852_-SINEAluAluSq2
CAediting_757405chr10_72191861_-SINEAluAluSq2
CAediting_757406chr10_72191866_-SINEAluAluSq2
CAediting_757407chr10_72195021_-SINEAluAluSp
CAediting_757408chr10_72195176_-SINEAluAluJo
CAediting_757409chr10_72195244_-SINEAluAluJo
CAediting_757410chr10_72195252_-SINEAluAluJo
CAediting_757411chr10_72195284_-SINEAluAluJo
CAediting_757412chr10_72195299_-SINEAluAluJo
CAediting_757413chr10_72195306_-SINEAluAluJo
CAediting_757414chr10_72195310_-SINEAluAluJo
CAediting_757415chr10_72195313_-SINEAluAluJo
CAediting_757416chr10_72195315_-SINEAluAluJo
CAediting_757417chr10_72195316_-SINEAluAluJo
CAediting_757418chr10_72195339_-SINEAluAluJo
CAediting_757419chr10_72195348_-SINEAluAluJo
CAediting_757420chr10_72195722_-SINEAluAluSp
CAediting_757421chr10_72195751_-SINEAluAluSp
CAediting_757422chr10_72195752_-SINEAluAluSp
CAediting_757423chr10_72196355_-SINEAluAluSz
CAediting_757424chr10_72196394_-SINEAluAluSz
CAediting_757425chr10_72196400_-SINEAluAluSz
CAediting_757426chr10_72196407_-SINEAluAluSz
CAediting_757427chr10_72196411_-SINEAluAluSz
CAediting_757428chr10_72196443_-SINEAluAluSz
CAediting_757429chr10_72198945_-SINEAluAluSg
CAediting_757430chr10_72198981_-SINEAluAluSg
CAediting_757431chr10_72198995_-SINEAluAluSg
CAediting_757432chr10_72199010_-SINEAluAluSg
CAediting_757433chr10_72199011_-SINEAluAluSg
CAediting_757434chr10_72199018_-SINEAluAluSg
CAediting_757435chr10_72199020_-SINEAluAluSg
CAediting_757436chr10_72199043_-SINEAluAluSg
CAediting_757437chr10_72199087_-SINEAluAluSg
CAediting_757438chr10_72199088_-SINEAluAluSg
CAediting_757439chr10_72199094_-SINEAluAluSg
CAediting_757440chr10_72199262_-SINEAluAluSc8
CAediting_757441chr10_72199426_-SINEAluAluSg
CAediting_757442chr10_72199435_-SINEAluAluSg
CAediting_757443chr10_72199442_-SINEAluAluSg
CAediting_757444chr10_72199501_-SINEAluAluSg
CAediting_757445chr10_72199525_-SINEAluAluSg
CAediting_757446chr10_72199568_-SINEAluAluSg
CAediting_757447chr10_72199569_-SINEAluAluSg
CAediting_757448chr10_72199591_-SINEAluAluSg
CAediting_757449chr10_72199853_-SINEAluAluJb
CAediting_757450chr10_72199860_-SINEAluAluJb
CAediting_757451chr10_72199864_-SINEAluAluJb
CAediting_757452chr10_72199870_-SINEAluAluJb
CAediting_757453chr10_72199927_-SINEAluAluJb
CAediting_757454chr10_72199936_-SINEAluAluJb
CAediting_757455chr10_72199937_-SINEAluAluJb
CAediting_757456chr10_72199952_-SINEAluAluJb
CAediting_757457chr10_72199960_-SINEAluAluJb
CAediting_757458chr10_72199970_-SINEAluAluJb
CAediting_757459chr10_72199983_-SINEAluAluJb
CAediting_757460chr10_72200005_-SINEAluAluJb
CAediting_757461chr10_72200014_-SINEAluAluJb
CAediting_757462chr10_72200457_-SINEAluAluSp
CAediting_757463chr10_72200483_-SINEAluAluSp
CAediting_757464chr10_72200486_-SINEAluAluSp
CAediting_757465chr10_72200536_-SINEAluAluSp
CAediting_757466chr10_72200540_-SINEAluAluSp
CAediting_757467chr10_72200548_-SINEAluAluSp
CAediting_757468chr10_72201250_-SINEAluAluJr
CAediting_757469chr10_72201304_-SINEAluAluJr
CAediting_757470chr10_72201655_-SINEAluAluJo
CAediting_757471chr10_72201900_-SINEAluAluJb
CAediting_757472chr10_72207292_-SINEAluAluSx
CAediting_757473chr10_72207302_-SINEAluAluSx
CAediting_757474chr10_72207890_-SINEAluAluJo
CAediting_757475chr10_72207901_-SINEAluAluJo
CAediting_757476chr10_72207940_-SINEAluAluJo
CAediting_757477chr10_72208109_-SINEAluAluJo
CAediting_757478chr10_72208946_-SINEAluAluJb
CAediting_757479chr10_72208947_-SINEAluAluJb
CAediting_757480chr10_72208979_-SINEAluAluJb
CAediting_757481chr10_72208992_-SINEAluAluJb
CAediting_757482chr10_72209103_-SINEAluAluJb
CAediting_757483chr10_72209127_-SINEAluAluJb
CAediting_757484chr10_72209451_-SINEAluAluJb
CAediting_757485chr10_72210308_-SINEAluAluSq2
CAediting_757486chr10_72210324_-SINEAluAluSq2
CAediting_757487chr10_72210327_-SINEAluAluSq2
CAediting_757488chr10_72210333_-SINEAluAluSq2
CAediting_757489chr10_72213916_-SINEAluAluSg
CAediting_757490chr10_72213926_-SINEAluAluSg
CAediting_757491chr10_72214448_-SINEAluAluSq2
CAediting_757492chr10_72214452_-SINEAluAluSq2
CAediting_757493chr10_72214461_-SINEAluAluSq2
CAediting_757494chr10_72214474_-SINEAluAluSq2
CAediting_757495chr10_72214497_-SINEAluAluSq2
CAediting_757496chr10_72214505_-SINEAluAluSq2
CAediting_757497chr10_72214508_-SINEAluAluSq2
CAediting_757498chr10_72214513_-SINEAluAluSq2
CAediting_757499chr10_72214514_-SINEAluAluSq2
CAediting_757500chr10_72214540_-SINEAluAluSq2
CAediting_757501chr10_72214550_-SINEAluAluSq2
CAediting_757502chr10_72214570_-SINEAluAluSq2
CAediting_757503chr10_72214572_-SINEAluAluSq2
CAediting_757504chr10_72214580_-SINEAluAluSq2
CAediting_757505chr10_72215323_-SINEAluAluSx1

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RNA A-to-I editing events in the alternative splicing sites for ASCC1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000138303.16.ASCC1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000138303.16.ASCC1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ASCC1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ASCC1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


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The effects of the RNA editing to the miRNA binding sites for ASCC1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_757323chr10_72096843_-ENSG00000138303.16ENST00000394919hsa-let-7d-3p72096838720968458mer-1a7209683872096859155.00-13.65
CAediting_757323chr10_72096843_-ENSG00000138303.16ENST00000342444hsa-let-7d-3p72096838720968458mer-1a7209683872096859155.00-13.65
CAediting_757323chr10_72096843_-ENSG00000138303.16ENST00000486689hsa-let-7d-3p72096838720968458mer-1a7209683872096859155.00-13.65

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_688080chr9_63819626_+ENSG00000138303.16ENST00000394919hsa-miR-4477b72096774720967807mer-m87209677372096796170-19.27
CAediting_688080chr9_63819626_+ENSG00000138303.16ENST00000342444hsa-miR-4477b72096774720967807mer-m87209677372096796170-19.27
CAediting_688081chr9_63819627_+ENSG00000138303.16ENST00000342444hsa-miR-4477b72097419720974268mer-1a7209741972097440140-11.16
CAediting_688080chr9_63819626_+ENSG00000138303.16ENST00000486689hsa-miR-4477b72096774720967807mer-m87209677372096796170-19.27
CAediting_688081chr9_63819627_+ENSG00000138303.16ENST00000486689hsa-miR-4477b72097419720974268mer-1a7209741972097440140-11.16
CAediting_688081chr9_63819627_+ENSG00000138303.16ENST00000530394hsa-miR-4477b72097419720974268mer-1a7209741972097440140-11.16
CAediting_688080chr9_63819626_+ENSG00000138303.16ENST00000461369hsa-miR-4477b72196875721968817mer-m87219687472196895145-10.04
CAediting_393chr1_1167164_+ENSG00000138303.16ENST00000461369hsa-miR-200b-3p72161651721616577mer-m87216165072161670155-14.49
CAediting_396018chr5_1062918_-ENSG00000138303.16ENST00000394919hsa-miR-463572096773720967797mer-m87209677272096792147-15.25
CAediting_396018chr5_1062918_-ENSG00000138303.16ENST00000342444hsa-miR-463572096773720967797mer-m87209677272096792147-15.25
CAediting_396018chr5_1062918_-ENSG00000138303.16ENST00000486689hsa-miR-463572096773720967797mer-m87209677272096792147-15.25
CAediting_1229414chr17_67471546_+ENSG00000138303.16ENST00000461369hsa-miR-548aa72198606721986127mer-m87219860572198627148-10.71
CAediting_580943chr7_100356700_+ENSG00000138303.16ENST00000532011hsa-miR-6840-3p72212235722122417mer-m87221223472212259147-26.04
CAediting_468389chr6_31355314_-ENSG00000138303.16ENST00000394919hsa-miR-6891-5p72096222720962298mer-1a7209622272096242152-28.17

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573001chr7_92204086_-ENSG00000138303.16ENST00000394919hsa-miR-1285-5p72096081720960877mer-m87209608072096098152-14.18
CAediting_468389chr6_31355314_-ENSG00000138303.16ENST00000394919hsa-miR-6891-5p72096184720961896mer7209617972096197153-28.57

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ASCC1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for ASCC1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for ASCC1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for ASCC1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for ASCC1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ASCC1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
ASCC1C0003886Arthrogryposis1GENOMICS_ENGLAND
ASCC1C0009917Contracture1GENOMICS_ENGLAND
ASCC1C0026827Muscle hypotonia1GENOMICS_ENGLAND
ASCC1C0026847Spinal Muscular Atrophy1GENOMICS_ENGLAND
ASCC1C1276035Pena-Shokeir syndrome type I1GENOMICS_ENGLAND
ASCC1C4225176SPINAL MUSCULAR ATROPHY WITH CONGENITAL BONE FRACTURES 21CTD_human;GENOMICS_ENGLAND