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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: PCDH7 (CAeditome ID:5099)

Gene summary for PCDH7

check button Gene summary
Gene informationGene symbol

PCDH7

Gene ID

5099

Gene nameprotocadherin 7
SynonymsBH-Pcdh|BHPCDH|PPP1R120
Cytomap

4p15.1

Type of geneprotein-coding
Descriptionprotocadherin-7BH-protocadherin (brain-heart)brain-heart protocadherinprotein phosphatase 1, regulatory subunit 120
Modification date20210518
UniProtAcc

O60245

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
PCDH7

GO:0005886

Protocadherin-7

0000052


Top

RNA A-to-I events for PCDH7

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000169851.14
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_353854(30721886, +), CAediting_353855(30736616, +), CAediting_353856(30764745, +), CAediting_353857(30764821, +), CAediting_353858(30764838, +), CAediting_353859(30772976, +), CAediting_353860(30773027, +), CAediting_353861(30773031, +), CAediting_353862(30803701, +), CAediting_353863(30804392, +), CAediting_353864(30804396, +), CAediting_353865(30804418, +), CAediting_353866(30804432, +), CAediting_353867(30804441, +), CAediting_353868(30804445, +), CAediting_353869(30806074, +), CAediting_353870(30846866, +), CAediting_353871(30846916, +), CAediting_353872(30869727, +), CAediting_353873(30869838, +), CAediting_353874(30876875, +), CAediting_353875(30881291, +), CAediting_353876(30892053, +), CAediting_353877(30926471, +), CAediting_353878(30928053, +), CAediting_353879(30928193, +), CAediting_353880(30930659, +), CAediting_353881(30930835, +), CAediting_353882(30930867, +), CAediting_353883(30930880, +), CAediting_353884(30930909, +), CAediting_353885(30930927, +), CAediting_353886(30931390, +), CAediting_353887(30946839, +), CAediting_353888(30955563, +), CAediting_353889(30955618, +), CAediting_353890(30955675, +), CAediting_353891(30955678, +), CAediting_353892(30955688, +), CAediting_353893(30955694, +), CAediting_353894(30955758, +), CAediting_353895(30955769, +), CAediting_353896(30955811, +), CAediting_353897(30955823, +), CAediting_353898(30955829, +), CAediting_353899(30955831, +), CAediting_353900(30955929, +), CAediting_353901(30955930, +), CAediting_353902(30955935, +), CAediting_353903(30955996, +), CAediting_353904(30955997, +), CAediting_353905(30956049, +), CAediting_353906(30956067, +), CAediting_353907(30956076, +), CAediting_353908(30956099, +), CAediting_353909(30956106, +), CAediting_353910(30956134, +), CAediting_353911(30956135, +), CAediting_353912(30956142, +), CAediting_353913(30956148, +), CAediting_353914(30961418, +), CAediting_353915(30961431, +), CAediting_353916(30961453, +), CAediting_353917(30962513, +), CAediting_353918(30962549, +), CAediting_353919(30962605, +), CAediting_353920(30962606, +), CAediting_353921(30962609, +), CAediting_353922(30962628, +), CAediting_353923(30962635, +), CAediting_353924(30962636, +), CAediting_353925(30962638, +), CAediting_353926(30962641, +), CAediting_353927(30962642, +), CAediting_353928(30962646, +), CAediting_353929(30962692, +), CAediting_353930(30962697, +), CAediting_353931(30962702, +), CAediting_353932(30962723, +), CAediting_353933(30964322, +), CAediting_353934(30971763, +), CAediting_353935(30971783, +), CAediting_353936(30971799, +), CAediting_353937(30971800, +), CAediting_353938(30971802, +), CAediting_353939(30971806, +), CAediting_353940(30971809, +), CAediting_353941(30971810, +), CAediting_353942(30971811, +), CAediting_353943(30971812, +), CAediting_353944(30971815, +), CAediting_353945(30976210, +), CAediting_353946(30976480, +), CAediting_353947(30976527, +), CAediting_353948(30976531, +), CAediting_353949(30976540, +), CAediting_353950(30976542, +), CAediting_353951(30976601, +), CAediting_353952(30979098, +), CAediting_353953(30979102, +), CAediting_353954(30979115, +), CAediting_353955(30979124, +), CAediting_353956(30979139, +), CAediting_353957(30979141, +), CAediting_353958(30979149, +), CAediting_353959(30979160, +), CAediting_353960(30979163, +), CAediting_353961(30979167, +), CAediting_353962(30979173, +), CAediting_353963(30979174, +), CAediting_353964(30979175, +), CAediting_353965(30979205, +), CAediting_353966(30979211, +), CAediting_353967(30979229, +), CAediting_353968(30979232, +), CAediting_353969(30979246, +), CAediting_353970(30979247, +), CAediting_353971(30979267, +), CAediting_353972(30979271, +), CAediting_353973(30979276, +), CAediting_353974(30979315, +), CAediting_353975(31006691, +), CAediting_353976(31006714, +), CAediting_353977(31006745, +), CAediting_353978(31006771, +), CAediting_353979(31006806, +), CAediting_353980(31006824, +), CAediting_353981(31027603, +), CAediting_353982(31027606, +), CAediting_353983(31027637, +), CAediting_353984(31028526, +), CAediting_353985(31032374, +), CAediting_353986(31032430, +), CAediting_353987(31032474, +), CAediting_353988(31032488, +), CAediting_353989(31032493, +), CAediting_353990(31032516, +), CAediting_353991(31032533, +), CAediting_353992(31032561, +), CAediting_353993(31036325, +), CAediting_353994(31053497, +), CAediting_353995(31054013, +), CAediting_353996(31054095, +), CAediting_353997(31054166, +), CAediting_353998(31054226, +), CAediting_353999(31055603, +), CAediting_354000(31055608, +), CAediting_354001(31055657, +), CAediting_354002(31055676, +), CAediting_354003(31055677, +), CAediting_354004(31055694, +), CAediting_354005(31055703, +), CAediting_354006(31055718, +), CAediting_354007(31055760, +), CAediting_354008(31055782, +), CAediting_354009(31055799, +), CAediting_354010(31055812, +), CAediting_354011(31055813, +), CAediting_354012(31055824, +), CAediting_354013(31056114, +), CAediting_354014(31056119, +), CAediting_354015(31056120, +), CAediting_354016(31056130, +), CAediting_354017(31056140, +), CAediting_354018(31056142, +), CAediting_354019(31056143, +), CAediting_354020(31056146, +), CAediting_354021(31056149, +), CAediting_354022(31056154, +), CAediting_354023(31056159, +), CAediting_354024(31056170, +), CAediting_354025(31056173, +), CAediting_354026(31056204, +), CAediting_354027(31056205, +), CAediting_354028(31056206, +), CAediting_354029(31056208, +), CAediting_354030(31056209, +), CAediting_354031(31056210, +), CAediting_354032(31056212, +), CAediting_354033(31056216, +), CAediting_354034(31056217, +), CAediting_354035(31056218, +), CAediting_354036(31056221, +), CAediting_354037(31056237, +), CAediting_354038(31056239, +), CAediting_354039(31056253, +), CAediting_354040(31056270, +), CAediting_354041(31056277, +), CAediting_354042(31056283, +), CAediting_354043(31056288, +), CAediting_354044(31056293, +), CAediting_354045(31056303, +), CAediting_354046(31056312, +), CAediting_354047(31056313, +), CAediting_354048(31056322, +), CAediting_354049(31056350, +), CAediting_354050(31056772, +), CAediting_354051(31056789, +), CAediting_354052(31056840, +), CAediting_354053(31056841, +), CAediting_354054(31056842, +), CAediting_354055(31056854, +), CAediting_354056(31056863, +), CAediting_354057(31074588, +), CAediting_354058(31074677, +), CAediting_354059(31074685, +), CAediting_354060(31074686, +), CAediting_354061(31074704, +), CAediting_354062(31074705, +), CAediting_354063(31074726, +), CAediting_354064(31077260, +), CAediting_354065(31077288, +), CAediting_354066(31077289, +), CAediting_354067(31077294, +), CAediting_354068(31077298, +), CAediting_354069(31077302, +), CAediting_354070(31077311, +), CAediting_354071(31078301, +), CAediting_354072(31081018, +), CAediting_354073(31097295, +), CAediting_354074(31097297, +), CAediting_354075(31097304, +), CAediting_354076(31097333, +), CAediting_354077(31097339, +), CAediting_354078(31097360, +), CAediting_354079(31110794, +),

Top

RNA editing positional annotations for PCDH7 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_353854chr4_30721886_+nonsynonymous SNVENST00000361762.3c.A464Gp.N155SDPD
CAediting_353854chr4_30721886_+nonsynonymous SNVENST00000543491.2c.A464Gp.N155SDPD

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_353854chr4_30721886_+exonic
CAediting_353855chr4_30736616_+intronic
CAediting_353856chr4_30764745_+intronic
CAediting_353857chr4_30764821_+intronic
CAediting_353858chr4_30764838_+intronic
CAediting_353859chr4_30772976_+intronic
CAediting_353860chr4_30773027_+intronic
CAediting_353861chr4_30773031_+intronic
CAediting_353862chr4_30803701_+intronic
CAediting_353863chr4_30804392_+intronic
CAediting_353864chr4_30804396_+intronic
CAediting_353865chr4_30804418_+intronic
CAediting_353866chr4_30804432_+intronic
CAediting_353867chr4_30804441_+intronic
CAediting_353868chr4_30804445_+intronic
CAediting_353869chr4_30806074_+intronic
CAediting_353870chr4_30846866_+intronic
CAediting_353871chr4_30846916_+intronic
CAediting_353872chr4_30869727_+intronic
CAediting_353873chr4_30869838_+intronic
CAediting_353874chr4_30876875_+intronic
CAediting_353875chr4_30881291_+intronic
CAediting_353876chr4_30892053_+intronic
CAediting_353877chr4_30926471_+ncRNA_intronic
CAediting_353878chr4_30928053_+ncRNA_intronic
CAediting_353879chr4_30928193_+ncRNA_intronic
CAediting_353880chr4_30930659_+ncRNA_intronic
CAediting_353881chr4_30930835_+ncRNA_intronic
CAediting_353882chr4_30930867_+ncRNA_intronic
CAediting_353883chr4_30930880_+ncRNA_intronic
CAediting_353884chr4_30930909_+ncRNA_intronic
CAediting_353885chr4_30930927_+ncRNA_intronic
CAediting_353886chr4_30931390_+ncRNA_intronic
CAediting_353887chr4_30946839_+ncRNA_intronic
CAediting_353888chr4_30955563_+ncRNA_intronic
CAediting_353889chr4_30955618_+ncRNA_intronic
CAediting_353890chr4_30955675_+ncRNA_intronic
CAediting_353891chr4_30955678_+ncRNA_intronic
CAediting_353892chr4_30955688_+ncRNA_intronic
CAediting_353893chr4_30955694_+ncRNA_intronic
CAediting_353894chr4_30955758_+ncRNA_intronic
CAediting_353895chr4_30955769_+ncRNA_intronic
CAediting_353896chr4_30955811_+ncRNA_intronic
CAediting_353897chr4_30955823_+ncRNA_intronic
CAediting_353898chr4_30955829_+ncRNA_intronic
CAediting_353899chr4_30955831_+ncRNA_intronic
CAediting_353900chr4_30955929_+ncRNA_intronic
CAediting_353901chr4_30955930_+ncRNA_intronic
CAediting_353902chr4_30955935_+ncRNA_intronic
CAediting_353903chr4_30955996_+ncRNA_intronic
CAediting_353904chr4_30955997_+ncRNA_intronic
CAediting_353905chr4_30956049_+ncRNA_intronic
CAediting_353906chr4_30956067_+ncRNA_intronic
CAediting_353907chr4_30956076_+ncRNA_intronic
CAediting_353908chr4_30956099_+ncRNA_intronic
CAediting_353909chr4_30956106_+ncRNA_intronic
CAediting_353910chr4_30956134_+ncRNA_intronic
CAediting_353911chr4_30956135_+ncRNA_intronic
CAediting_353912chr4_30956142_+ncRNA_intronic
CAediting_353913chr4_30956148_+ncRNA_intronic
CAediting_353914chr4_30961418_+ncRNA_intronic
CAediting_353915chr4_30961431_+ncRNA_intronic
CAediting_353916chr4_30961453_+ncRNA_intronic
CAediting_353917chr4_30962513_+ncRNA_intronic
CAediting_353918chr4_30962549_+ncRNA_intronic
CAediting_353919chr4_30962605_+ncRNA_intronic
CAediting_353920chr4_30962606_+ncRNA_intronic
CAediting_353921chr4_30962609_+ncRNA_intronic
CAediting_353922chr4_30962628_+ncRNA_intronic
CAediting_353923chr4_30962635_+ncRNA_intronic
CAediting_353924chr4_30962636_+ncRNA_intronic
CAediting_353925chr4_30962638_+ncRNA_intronic
CAediting_353926chr4_30962641_+ncRNA_intronic
CAediting_353927chr4_30962642_+ncRNA_intronic
CAediting_353928chr4_30962646_+ncRNA_intronic
CAediting_353929chr4_30962692_+ncRNA_intronic
CAediting_353930chr4_30962697_+ncRNA_intronic
CAediting_353931chr4_30962702_+ncRNA_intronic
CAediting_353932chr4_30962723_+ncRNA_intronic
CAediting_353933chr4_30964322_+ncRNA_intronic
CAediting_353934chr4_30971763_+ncRNA_intronic
CAediting_353935chr4_30971783_+ncRNA_intronic
CAediting_353936chr4_30971799_+ncRNA_intronic
CAediting_353937chr4_30971800_+ncRNA_intronic
CAediting_353938chr4_30971802_+ncRNA_intronic
CAediting_353939chr4_30971806_+ncRNA_intronic
CAediting_353940chr4_30971809_+ncRNA_intronic
CAediting_353941chr4_30971810_+ncRNA_intronic
CAediting_353942chr4_30971811_+ncRNA_intronic
CAediting_353943chr4_30971812_+ncRNA_intronic
CAediting_353944chr4_30971815_+ncRNA_intronic
CAediting_353945chr4_30976210_+ncRNA_intronic
CAediting_353946chr4_30976480_+ncRNA_intronic
CAediting_353947chr4_30976527_+ncRNA_intronic
CAediting_353948chr4_30976531_+ncRNA_intronic
CAediting_353949chr4_30976540_+ncRNA_intronic
CAediting_353950chr4_30976542_+ncRNA_intronic
CAediting_353951chr4_30976601_+ncRNA_intronic
CAediting_353952chr4_30979098_+ncRNA_intronic
CAediting_353953chr4_30979102_+ncRNA_intronic
CAediting_353954chr4_30979115_+ncRNA_intronic
CAediting_353955chr4_30979124_+ncRNA_intronic
CAediting_353956chr4_30979139_+ncRNA_intronic
CAediting_353957chr4_30979141_+ncRNA_intronic
CAediting_353958chr4_30979149_+ncRNA_intronic
CAediting_353959chr4_30979160_+ncRNA_intronic
CAediting_353960chr4_30979163_+ncRNA_intronic
CAediting_353961chr4_30979167_+ncRNA_intronic
CAediting_353962chr4_30979173_+ncRNA_intronic
CAediting_353963chr4_30979174_+ncRNA_intronic
CAediting_353964chr4_30979175_+ncRNA_intronic
CAediting_353965chr4_30979205_+ncRNA_intronic
CAediting_353966chr4_30979211_+ncRNA_intronic
CAediting_353967chr4_30979229_+ncRNA_intronic
CAediting_353968chr4_30979232_+ncRNA_intronic
CAediting_353969chr4_30979246_+ncRNA_intronic
CAediting_353970chr4_30979247_+ncRNA_intronic
CAediting_353971chr4_30979267_+ncRNA_intronic
CAediting_353972chr4_30979271_+ncRNA_intronic
CAediting_353973chr4_30979276_+ncRNA_intronic
CAediting_353974chr4_30979315_+ncRNA_intronic
CAediting_353975chr4_31006691_+intronic
CAediting_353976chr4_31006714_+intronic
CAediting_353977chr4_31006745_+intronic
CAediting_353978chr4_31006771_+intronic
CAediting_353979chr4_31006806_+intronic
CAediting_353980chr4_31006824_+intronic
CAediting_353981chr4_31027603_+intronic
CAediting_353982chr4_31027606_+intronic
CAediting_353983chr4_31027637_+intronic
CAediting_353984chr4_31028526_+intronic
CAediting_353985chr4_31032374_+intronic
CAediting_353986chr4_31032430_+intronic
CAediting_353987chr4_31032474_+intronic
CAediting_353988chr4_31032488_+intronic
CAediting_353989chr4_31032493_+intronic
CAediting_353990chr4_31032516_+intronic
CAediting_353991chr4_31032533_+intronic
CAediting_353992chr4_31032561_+intronic
CAediting_353993chr4_31036325_+intronic
CAediting_353994chr4_31053497_+intronic
CAediting_353995chr4_31054013_+intronic
CAediting_353996chr4_31054095_+intronic
CAediting_353997chr4_31054166_+intronic
CAediting_353998chr4_31054226_+intronic
CAediting_353999chr4_31055603_+intronic
CAediting_354000chr4_31055608_+intronic
CAediting_354001chr4_31055657_+intronic
CAediting_354002chr4_31055676_+intronic
CAediting_354003chr4_31055677_+intronic
CAediting_354004chr4_31055694_+intronic
CAediting_354005chr4_31055703_+intronic
CAediting_354006chr4_31055718_+intronic
CAediting_354007chr4_31055760_+intronic
CAediting_354008chr4_31055782_+intronic
CAediting_354009chr4_31055799_+intronic
CAediting_354010chr4_31055812_+intronic
CAediting_354011chr4_31055813_+intronic
CAediting_354012chr4_31055824_+intronic
CAediting_354013chr4_31056114_+intronic
CAediting_354014chr4_31056119_+intronic
CAediting_354015chr4_31056120_+intronic
CAediting_354016chr4_31056130_+intronic
CAediting_354017chr4_31056140_+intronic
CAediting_354018chr4_31056142_+intronic
CAediting_354019chr4_31056143_+intronic
CAediting_354020chr4_31056146_+intronic
CAediting_354021chr4_31056149_+intronic
CAediting_354022chr4_31056154_+intronic
CAediting_354023chr4_31056159_+intronic
CAediting_354024chr4_31056170_+intronic
CAediting_354025chr4_31056173_+intronic
CAediting_354026chr4_31056204_+intronic
CAediting_354027chr4_31056205_+intronic
CAediting_354028chr4_31056206_+intronic
CAediting_354029chr4_31056208_+intronic
CAediting_354030chr4_31056209_+intronic
CAediting_354031chr4_31056210_+intronic
CAediting_354032chr4_31056212_+intronic
CAediting_354033chr4_31056216_+intronic
CAediting_354034chr4_31056217_+intronic
CAediting_354035chr4_31056218_+intronic
CAediting_354036chr4_31056221_+intronic
CAediting_354037chr4_31056237_+intronic
CAediting_354038chr4_31056239_+intronic
CAediting_354039chr4_31056253_+intronic
CAediting_354040chr4_31056270_+intronic
CAediting_354041chr4_31056277_+intronic
CAediting_354042chr4_31056283_+intronic
CAediting_354043chr4_31056288_+intronic
CAediting_354044chr4_31056293_+intronic
CAediting_354045chr4_31056303_+intronic
CAediting_354046chr4_31056312_+intronic
CAediting_354047chr4_31056313_+intronic
CAediting_354048chr4_31056322_+intronic
CAediting_354049chr4_31056350_+intronic
CAediting_354050chr4_31056772_+intronic
CAediting_354051chr4_31056789_+intronic
CAediting_354052chr4_31056840_+intronic
CAediting_354053chr4_31056841_+intronic
CAediting_354054chr4_31056842_+intronic
CAediting_354055chr4_31056854_+intronic
CAediting_354056chr4_31056863_+intronic
CAediting_354057chr4_31074588_+intronic
CAediting_354058chr4_31074677_+intronic
CAediting_354059chr4_31074685_+intronic
CAediting_354060chr4_31074686_+intronic
CAediting_354061chr4_31074704_+intronic
CAediting_354062chr4_31074705_+intronic
CAediting_354063chr4_31074726_+intronic
CAediting_354064chr4_31077260_+intronic
CAediting_354065chr4_31077288_+intronic
CAediting_354066chr4_31077289_+intronic
CAediting_354067chr4_31077294_+intronic
CAediting_354068chr4_31077298_+intronic
CAediting_354069chr4_31077302_+intronic
CAediting_354070chr4_31077311_+intronic
CAediting_354071chr4_31078301_+intronic
CAediting_354072chr4_31081018_+intronic
CAediting_354073chr4_31097295_+intronic
CAediting_354074chr4_31097297_+intronic
CAediting_354075chr4_31097304_+intronic
CAediting_354076chr4_31097333_+intronic
CAediting_354077chr4_31097339_+intronic
CAediting_354078chr4_31097360_+intronic
CAediting_354079chr4_31110794_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_353855chr4_30736616_+SINEAluAluY
CAediting_353856chr4_30764745_+SINEAluAluSc5
CAediting_353857chr4_30764821_+SINEAluAluSc5
CAediting_353858chr4_30764838_+SINEAluAluSc5
CAediting_353859chr4_30772976_+SINEAluAluSz6
CAediting_353860chr4_30773027_+SINEAluAluSz6
CAediting_353861chr4_30773031_+SINEAluAluSz6
CAediting_353862chr4_30803701_+SINEAluAluJr
CAediting_353863chr4_30804392_+SINEAluAluSx3
CAediting_353864chr4_30804396_+SINEAluAluSx3
CAediting_353865chr4_30804418_+SINEAluAluSx3
CAediting_353866chr4_30804432_+SINEAluAluSx3
CAediting_353867chr4_30804441_+SINEAluAluSx3
CAediting_353868chr4_30804445_+SINEAluAluSx3
CAediting_353869chr4_30806074_+DNATcMar-TiggerTigger4a
CAediting_353870chr4_30846866_+SINEAluAluJr
CAediting_353871chr4_30846916_+SINEAluAluJr
CAediting_353872chr4_30869727_+LINEL1L1PA7
CAediting_353873chr4_30869838_+LINEL1L1PA7
CAediting_353874chr4_30876875_+LINEL1L1PA8
CAediting_353875chr4_30881291_+SINEAluAluSg7
CAediting_353877chr4_30926471_+SINEAluAluY
CAediting_353878chr4_30928053_+SINEAluAluJb
CAediting_353879chr4_30928193_+SINEAluAluJb
CAediting_353880chr4_30930659_+SINEAluAluJr
CAediting_353881chr4_30930835_+SINEAluAluJr
CAediting_353882chr4_30930867_+SINEAluAluJr
CAediting_353883chr4_30930880_+SINEAluAluJr
CAediting_353884chr4_30930909_+SINEAluAluJr
CAediting_353885chr4_30930927_+SINEAluAluJr
CAediting_353886chr4_30931390_+SINEAluAluSp
CAediting_353887chr4_30946839_+SINEAluAluSx1
CAediting_353888chr4_30955563_+SINEAluAluSz
CAediting_353889chr4_30955618_+SINEAluAluSz
CAediting_353890chr4_30955675_+SINEAluAluSz
CAediting_353891chr4_30955678_+SINEAluAluSz
CAediting_353892chr4_30955688_+SINEAluAluSz
CAediting_353893chr4_30955694_+SINEAluAluSz
CAediting_353894chr4_30955758_+SINEAluAluSz
CAediting_353895chr4_30955769_+SINEAluAluSz
CAediting_353896chr4_30955811_+SINEAluAluSz
CAediting_353897chr4_30955823_+SINEAluAluSz
CAediting_353898chr4_30955829_+SINEAluAluSz
CAediting_353899chr4_30955831_+SINEAluAluSz
CAediting_353900chr4_30955929_+SINEAluAluYf1
CAediting_353901chr4_30955930_+SINEAluAluYf1
CAediting_353902chr4_30955935_+SINEAluAluYf1
CAediting_353903chr4_30955996_+SINEAluAluYf1
CAediting_353904chr4_30955997_+SINEAluAluYf1
CAediting_353905chr4_30956049_+SINEAluAluYf1
CAediting_353906chr4_30956067_+SINEAluAluYf1
CAediting_353907chr4_30956076_+SINEAluAluYf1
CAediting_353908chr4_30956099_+SINEAluAluYf1
CAediting_353909chr4_30956106_+SINEAluAluYf1
CAediting_353910chr4_30956134_+SINEAluAluYf1
CAediting_353911chr4_30956135_+SINEAluAluYf1
CAediting_353912chr4_30956142_+SINEAluAluYf1
CAediting_353913chr4_30956148_+SINEAluAluYf1
CAediting_353914chr4_30961418_+SINEAluAluY
CAediting_353915chr4_30961431_+SINEAluAluY
CAediting_353916chr4_30961453_+SINEAluAluY
CAediting_353917chr4_30962513_+SINEAluAluJb
CAediting_353918chr4_30962549_+SINEAluAluJb
CAediting_353919chr4_30962605_+SINEAluAluJb
CAediting_353920chr4_30962606_+SINEAluAluJb
CAediting_353921chr4_30962609_+SINEAluAluJb
CAediting_353922chr4_30962628_+SINEAluAluJb
CAediting_353923chr4_30962635_+SINEAluAluJb
CAediting_353924chr4_30962636_+SINEAluAluJb
CAediting_353925chr4_30962638_+SINEAluAluJb
CAediting_353926chr4_30962641_+SINEAluAluJb
CAediting_353927chr4_30962642_+SINEAluAluJb
CAediting_353928chr4_30962646_+SINEAluAluJb
CAediting_353929chr4_30962692_+SINEAluAluJb
CAediting_353930chr4_30962697_+SINEAluAluJb
CAediting_353931chr4_30962702_+SINEAluAluJb
CAediting_353932chr4_30962723_+SINEAluAluJb
CAediting_353933chr4_30964322_+SINEAluAluYf1
CAediting_353934chr4_30971763_+SINEAluAluJb
CAediting_353935chr4_30971783_+SINEAluAluJb
CAediting_353936chr4_30971799_+SINEAluAluJb
CAediting_353937chr4_30971800_+SINEAluAluJb
CAediting_353938chr4_30971802_+SINEAluAluJb
CAediting_353939chr4_30971806_+SINEAluAluJb
CAediting_353940chr4_30971809_+SINEAluAluJb
CAediting_353941chr4_30971810_+SINEAluAluJb
CAediting_353942chr4_30971811_+SINEAluAluJb
CAediting_353943chr4_30971812_+SINEAluAluJb
CAediting_353944chr4_30971815_+SINEAluAluJb
CAediting_353945chr4_30976210_+SINEAluAluSp
CAediting_353946chr4_30976480_+SINEAluAluSg
CAediting_353947chr4_30976527_+SINEAluAluSg
CAediting_353948chr4_30976531_+SINEAluAluSg
CAediting_353949chr4_30976540_+SINEAluAluSg
CAediting_353950chr4_30976542_+SINEAluAluSg
CAediting_353951chr4_30976601_+SINEAluAluSg
CAediting_353952chr4_30979098_+SINEAluAluYj4
CAediting_353953chr4_30979102_+SINEAluAluYj4
CAediting_353954chr4_30979115_+SINEAluAluYj4
CAediting_353955chr4_30979124_+SINEAluAluYj4
CAediting_353956chr4_30979139_+SINEAluAluYj4
CAediting_353957chr4_30979141_+SINEAluAluYj4
CAediting_353958chr4_30979149_+SINEAluAluYj4
CAediting_353959chr4_30979160_+SINEAluAluYj4
CAediting_353960chr4_30979163_+SINEAluAluYj4
CAediting_353961chr4_30979167_+SINEAluAluYj4
CAediting_353962chr4_30979173_+SINEAluAluYj4
CAediting_353963chr4_30979174_+SINEAluAluYj4
CAediting_353964chr4_30979175_+SINEAluAluYj4
CAediting_353965chr4_30979205_+SINEAluAluYj4
CAediting_353966chr4_30979211_+SINEAluAluYj4
CAediting_353967chr4_30979229_+SINEAluAluYj4
CAediting_353968chr4_30979232_+SINEAluAluYj4
CAediting_353969chr4_30979246_+SINEAluAluYj4
CAediting_353970chr4_30979247_+SINEAluAluYj4
CAediting_353971chr4_30979267_+SINEAluAluYj4
CAediting_353972chr4_30979271_+SINEAluAluYj4
CAediting_353973chr4_30979276_+SINEAluAluYj4
CAediting_353974chr4_30979315_+SINEAluAluYj4
CAediting_353975chr4_31006691_+SINEAluAluSp
CAediting_353976chr4_31006714_+SINEAluAluSp
CAediting_353977chr4_31006745_+SINEAluAluSp
CAediting_353978chr4_31006771_+SINEAluAluSp
CAediting_353979chr4_31006806_+SINEAluAluSp
CAediting_353980chr4_31006824_+SINEAluAluSp
CAediting_353981chr4_31027603_+SINEAluAluSc5
CAediting_353982chr4_31027606_+SINEAluAluSc5
CAediting_353983chr4_31027637_+SINEAluAluSc5
CAediting_353984chr4_31028526_+SINEAluAluJr4
CAediting_353985chr4_31032374_+SINEAluAluSz6
CAediting_353986chr4_31032430_+SINEAluAluSz6
CAediting_353987chr4_31032474_+SINEAluAluSz6
CAediting_353988chr4_31032488_+SINEAluAluSz6
CAediting_353989chr4_31032493_+SINEAluAluSz6
CAediting_353990chr4_31032516_+SINEAluAluSz6
CAediting_353991chr4_31032533_+SINEAluAluSz6
CAediting_353992chr4_31032561_+SINEAluAluSz6
CAediting_353993chr4_31036325_+SINEAluAluSz
CAediting_353994chr4_31053497_+SINEAluAluJr4
CAediting_353995chr4_31054013_+SINEAluAluJb
CAediting_353996chr4_31054095_+SINEAluAluJb
CAediting_353997chr4_31054166_+SINEAluAluJb
CAediting_353998chr4_31054226_+SINEAluAluJb
CAediting_353999chr4_31055603_+SINEAluAluSx1
CAediting_354000chr4_31055608_+SINEAluAluSx1
CAediting_354001chr4_31055657_+SINEAluAluSx1
CAediting_354002chr4_31055676_+SINEAluAluSx1
CAediting_354003chr4_31055677_+SINEAluAluSx1
CAediting_354004chr4_31055694_+SINEAluAluSx1
CAediting_354005chr4_31055703_+SINEAluAluSx1
CAediting_354006chr4_31055718_+SINEAluAluSx1
CAediting_354007chr4_31055760_+SINEAluAluSx1
CAediting_354008chr4_31055782_+SINEAluAluSx1
CAediting_354009chr4_31055799_+SINEAluAluSx1
CAediting_354010chr4_31055812_+SINEAluAluSx1
CAediting_354011chr4_31055813_+SINEAluAluSx1
CAediting_354012chr4_31055824_+SINEAluAluSx1
CAediting_354013chr4_31056114_+SINEAluAluJb
CAediting_354014chr4_31056119_+SINEAluAluJb
CAediting_354015chr4_31056120_+SINEAluAluJb
CAediting_354016chr4_31056130_+SINEAluAluJb
CAediting_354017chr4_31056140_+SINEAluAluJb
CAediting_354018chr4_31056142_+SINEAluAluJb
CAediting_354019chr4_31056143_+SINEAluAluJb
CAediting_354020chr4_31056146_+SINEAluAluJb
CAediting_354021chr4_31056149_+SINEAluAluJb
CAediting_354022chr4_31056154_+SINEAluAluJb
CAediting_354023chr4_31056159_+SINEAluAluJb
CAediting_354024chr4_31056170_+SINEAluAluJb
CAediting_354025chr4_31056173_+SINEAluAluJb
CAediting_354026chr4_31056204_+SINEAluAluJb
CAediting_354027chr4_31056205_+SINEAluAluJb
CAediting_354028chr4_31056206_+SINEAluAluJb
CAediting_354029chr4_31056208_+SINEAluAluJb
CAediting_354030chr4_31056209_+SINEAluAluJb
CAediting_354031chr4_31056210_+SINEAluAluJb
CAediting_354032chr4_31056212_+SINEAluAluJb
CAediting_354033chr4_31056216_+SINEAluAluJb
CAediting_354034chr4_31056217_+SINEAluAluJb
CAediting_354035chr4_31056218_+SINEAluAluJb
CAediting_354036chr4_31056221_+SINEAluAluJb
CAediting_354037chr4_31056237_+SINEAluAluJb
CAediting_354038chr4_31056239_+SINEAluAluJb
CAediting_354039chr4_31056253_+SINEAluAluJb
CAediting_354040chr4_31056270_+SINEAluAluJb
CAediting_354041chr4_31056277_+SINEAluAluJb
CAediting_354042chr4_31056283_+SINEAluAluJb
CAediting_354043chr4_31056288_+SINEAluAluJb
CAediting_354044chr4_31056293_+SINEAluAluJb
CAediting_354045chr4_31056303_+SINEAluAluJb
CAediting_354046chr4_31056312_+SINEAluAluJb
CAediting_354047chr4_31056313_+SINEAluAluJb
CAediting_354048chr4_31056322_+SINEAluAluJb
CAediting_354049chr4_31056350_+SINEAluAluJb
CAediting_354050chr4_31056772_+SINEAluAluSx
CAediting_354051chr4_31056789_+SINEAluAluSx
CAediting_354052chr4_31056840_+SINEAluAluSx
CAediting_354053chr4_31056841_+SINEAluAluSx
CAediting_354054chr4_31056842_+SINEAluAluSx
CAediting_354055chr4_31056854_+SINEAluAluSx
CAediting_354056chr4_31056863_+SINEAluAluSx
CAediting_354057chr4_31074588_+SINEAluAluSx
CAediting_354058chr4_31074677_+SINEAluAluSx
CAediting_354059chr4_31074685_+SINEAluAluSx
CAediting_354060chr4_31074686_+SINEAluAluSx
CAediting_354061chr4_31074704_+SINEAluAluSx
CAediting_354062chr4_31074705_+SINEAluAluSx
CAediting_354063chr4_31074726_+SINEAluAluSx
CAediting_354064chr4_31077260_+SINEAluAluSp
CAediting_354065chr4_31077288_+SINEAluAluSp
CAediting_354066chr4_31077289_+SINEAluAluSp
CAediting_354067chr4_31077294_+SINEAluAluSp
CAediting_354068chr4_31077298_+SINEAluAluSp
CAediting_354069chr4_31077302_+SINEAluAluSp
CAediting_354070chr4_31077311_+SINEAluAluSp
CAediting_354071chr4_31078301_+SINEAluAluJr4
CAediting_354072chr4_31081018_+LTRERVL-MaLRTHE1B
CAediting_354073chr4_31097295_+SINEAluAluSx
CAediting_354074chr4_31097297_+SINEAluAluSx
CAediting_354075chr4_31097304_+SINEAluAluSx
CAediting_354076chr4_31097333_+SINEAluAluSx
CAediting_354077chr4_31097339_+SINEAluAluSx
CAediting_354078chr4_31097360_+SINEAluAluSx
CAediting_354079chr4_31110794_+SINEAluAluY

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RNA A-to-I editing events in the alternative splicing sites for PCDH7

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000169851.14.PCDH7.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000169851.14.PCDH7.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PCDH7

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PCDH7

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


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The effects of the RNA editing to the miRNA binding sites for PCDH7

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000169851.14ENST00000361762hsa-miR-200b-3p30732488307324936mer3073247330732494152-15.15
CAediting_688080chr9_63819626_+ENSG00000169851.14ENST00000361762hsa-miR-4477b30732214307322207mer-m83073220030732221159-9.63
CAediting_688081chr9_63819627_+ENSG00000169851.14ENST00000543491hsa-miR-4477b30724867307248737mer-m83072485030724874144-14.29
CAediting_688081chr9_63819627_+ENSG00000169851.14ENST00000511884hsa-miR-4477b31143219311432257mer-m83114320431143226147-12.19
CAediting_1160181chr17_7017644_-ENSG00000169851.14ENST00000361762hsa-miR-195-3p30732475307324817mer-m83073246130732482143-9.73
CAediting_1229413chr17_67471544_+ENSG00000169851.14ENST00000511884hsa-miR-548aa31145882311458898mer-1a3114586531145889145-10.25
CAediting_1229413chr17_67471544_+ENSG00000169851.14ENST00000511884hsa-miR-548aa31146082311460887mer-m83114606031146089144-13.52
CAediting_1229413chr17_67471544_+ENSG00000169851.14ENST00000511884hsa-miR-548aa31146795311468028mer-1a3114677831146802140-13.43
CAediting_1229414chr17_67471546_+ENSG00000169851.14ENST00000511884hsa-miR-548aa31143732311437387mer-m83114371631143739162-15.71
CAediting_1160181chr17_7017644_-ENSG00000169851.14ENST00000511884hsa-miR-195-3p31144198311442058mer-1a3114418531144205147-12.22
CAediting_1160181chr17_7017644_-ENSG00000169851.14ENST00000511884hsa-miR-195-3p31144814311448207mer-m83114480031144821146-13.37
CAediting_77128chr1_85133844_+ENSG00000169851.14ENST00000511884hsa-miR-4423-3p31143818311438247mer-m83114380431143825162-14.7
CAediting_442554chr5_154685830_+ENSG00000169851.14ENST00000511884hsa-miR-130331143107311431148mer-1a3114309431143114156-22.03
CAediting_442554chr5_154685830_+ENSG00000169851.14ENST00000621961hsa-miR-130331143107311431148mer-1a3114309431143114156-22.03
CAediting_1524209chrX_134546392_-ENSG00000169851.14ENST00000511884hsa-miR-503-5p31146099311461046mer3114608431146105143-25.37

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1160181chr17_7017644_-ENSG00000169851.14ENST00000361762hsa-miR-195-3p30732045307320517mer-m83073203130732052140-8.97
CAediting_1160181chr17_7017644_-ENSG00000169851.14ENST00000361762hsa-miR-195-3p30732613307326208mer-1a3073259830732620153-11.73
CAediting_1160181chr17_7017644_-ENSG00000169851.14ENST00000361762hsa-miR-195-3p30731403307314097mer-m83073138930731410140-9.34
CAediting_393chr1_1167164_+ENSG00000169851.14ENST00000361762hsa-miR-200b-3p30730983307309908mer-1a3073096830730990148-9.58
CAediting_1351755chr19_40282625_-ENSG00000169851.14ENST00000361762hsa-miR-64130731078307310847mer-m83073106130731085142-12.19
CAediting_573001chr7_92204086_-ENSG00000169851.14ENST00000511884hsa-miR-1285-5p31143883311438908mer-1a3114387031143890148-13.86
CAediting_1160181chr17_7017644_-ENSG00000169851.14ENST00000511884hsa-miR-195-3p31145691311456977mer-m83114567431145698147-12.51
CAediting_1524209chrX_134546392_-ENSG00000169851.14ENST00000511884hsa-miR-503-5p31144074311440796mer3114405931144080146-19.66
CAediting_748296chr10_51299626_+ENSG00000169851.14ENST00000511884hsa-miR-605-3p31145655311456617mer-m83114564031145662147-12.29

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PCDH7

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000361762.3protein_codingSoverviewSoverview
ENST00000543491.2protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_353854ENST00000361762.3chr4_30721886_+-2218.00-2216.40-2218.00
CAediting_353854ENST00000543491.2chr4_30721886_+-1679.00-1676.80-1679.00

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Relation with ADAR for PCDH7

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for PCDH7

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for PCDH7

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for PCDH7

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PCDH7

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource