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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: PCBP2 (CAeditome ID:5094)

Gene summary for PCBP2

check button Gene summary
Gene informationGene symbol

PCBP2

Gene ID

5094

Gene namepoly(rC) binding protein 2
SynonymsHNRNPE2|HNRPE2|hnRNP-E2
Cytomap

12q13.13

Type of geneprotein-coding
Descriptionpoly(rC)-binding protein 2alpha-CP2epididymis secretory sperm binding proteinheterogeneous nuclear ribonucleoprotein E2heterogenous nuclear ribonucleoprotein E2hnRNP E2
Modification date20210518
UniProtAcc

Q15366

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
PCBP2

GO:0003723

Poly(rC)-binding protein 2

7607214

PCBP2

GO:0039694

Poly(rC)-binding protein 2

12414943

PCBP2

GO:0075522

Poly(rC)-binding protein 2

12414943

PCBP2

GO:0005634

Poly(rC)-binding protein 2

22720776

PCBP2

GO:0005654

Poly(rC)-binding protein 2

0000052

PCBP2

GO:0005737

Poly(rC)-binding protein 2

19029303

PCBP2

GO:0005829

Poly(rC)-binding protein 2

0000052


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RNA A-to-I events for PCBP2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000197111.14

check button RNA A-to-I editing events in Cancer.
CAediting_893299(53456211, +), CAediting_893300(53456243, +), CAediting_893301(53456276, +), CAediting_893302(53456297, +), CAediting_893303(53456311, +), CAediting_893304(53456370, +), CAediting_893305(53457176, +), CAediting_893306(53457273, +), CAediting_893307(53457404, +), CAediting_893308(53457511, +), CAediting_893309(53457620, +), CAediting_893310(53458058, +), CAediting_893311(53458068, +), CAediting_893312(53458094, +), CAediting_893313(53458095, +), CAediting_893314(53458103, +), CAediting_893315(53458171, +), CAediting_893316(53458190, +), CAediting_893317(53458375, +), CAediting_893318(53458406, +), CAediting_893319(53458447, +), CAediting_893320(53458465, +), CAediting_893321(53458473, +), CAediting_893322(53458756, +), CAediting_893323(53458914, +), CAediting_893324(53458917, +), CAediting_893325(53458927, +), CAediting_893326(53460011, +), CAediting_893327(53460251, +), CAediting_893328(53469002, +), CAediting_893329(53469006, +), CAediting_893330(53469122, +), CAediting_893331(53469164, +), CAediting_893332(53469447, +), CAediting_893333(53469465, +), CAediting_893334(53469541, +), CAediting_893335(53469605, +), CAediting_893336(53469606, +), CAediting_893337(53469627, +), CAediting_893338(53469637, +), CAediting_893339(53469841, +), CAediting_893340(53469842, +), CAediting_893341(53469881, +), CAediting_893342(53469887, +), CAediting_893343(53469929, +), CAediting_893344(53470008, +), CAediting_893345(53470127, +), CAediting_893346(53470135, +), CAediting_893347(53470147, +), CAediting_893348(53470166, +), CAediting_893349(53470200, +), CAediting_893350(53470201, +), CAediting_893351(53470202, +), CAediting_893352(53470213, +), CAediting_893353(53470218, +), CAediting_893354(53470222, +), CAediting_893355(53470226, +), CAediting_893356(53470227, +), CAediting_893357(53470231, +), CAediting_893358(53470235, +), CAediting_893359(53470251, +), CAediting_893360(53470257, +), CAediting_893361(53470258, +), CAediting_893362(53470266, +), CAediting_893363(53470270, +), CAediting_893364(53470272, +), CAediting_893365(53470273, +), CAediting_893366(53470279, +), CAediting_893367(53470288, +), CAediting_893368(53470297, +), CAediting_893369(53470327, +), CAediting_893370(53470365, +), CAediting_893371(53470426, +), CAediting_893372(53470427, +), CAediting_893373(53470428, +), CAediting_893374(53470455, +), CAediting_893375(53470460, +), CAediting_893376(53470462, +), CAediting_893377(53470484, +), CAediting_893378(53470491, +), CAediting_893379(53470498, +), CAediting_893380(53470504, +), CAediting_893381(53470505, +), CAediting_893382(53470509, +), CAediting_893383(53470522, +), CAediting_893384(53470534, +), CAediting_893385(53470544, +), CAediting_893386(53470546, +), CAediting_893387(53470582, +), CAediting_893388(53470594, +), CAediting_893389(53470616, +), CAediting_893390(53470629, +), CAediting_893391(53470646, +), CAediting_893392(53470657, +), CAediting_893393(53470802, +), CAediting_893394(53471302, +), CAediting_893395(53471362, +), CAediting_893396(53471401, +), CAediting_893397(53471402, +), CAediting_893398(53471425, +), CAediting_893399(53473026, +), CAediting_893400(53473040, +), CAediting_893401(53473282, +), CAediting_893402(53473285, +), CAediting_893403(53473357, +), CAediting_893404(53476153, +), CAediting_893405(53477416, +), CAediting_893406(53477482, +), CAediting_893407(53477519, +), CAediting_893408(53477545, +), CAediting_893409(53477551, +), CAediting_893410(53477554, +), CAediting_893411(53477562, +), CAediting_893412(53477578, +), CAediting_893413(53477586, +), CAediting_893414(53478253, +), CAediting_893415(53478261, +), CAediting_893416(53478274, +), CAediting_893417(53478280, +), CAediting_893418(53478300, +), CAediting_893419(53478309, +), CAediting_893420(53478343, +), CAediting_893421(53478348, +), CAediting_893422(53478349, +), CAediting_893423(53478350, +), CAediting_893424(53478352, +), CAediting_893425(53478355, +), CAediting_893426(53478356, +), CAediting_893427(53478357, +), CAediting_893428(53478387, +), CAediting_893429(53478388, +), CAediting_893430(53478397, +), CAediting_893431(53478401, +), CAediting_893432(53478414, +), CAediting_893433(53478420, +), CAediting_893434(53478440, +), CAediting_893435(53478488, +), CAediting_893436(53478526, +), CAediting_893437(53478602, +), CAediting_893438(53478713, +), CAediting_893439(53478717, +), CAediting_893440(53478726, +), CAediting_893441(53478730, +), CAediting_893442(53478755, +), CAediting_893443(53478761, +), CAediting_893444(53478771, +),

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RNA editing positional annotations for PCBP2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_893299chr12_53456211_+ncRNA_intronic
CAediting_893300chr12_53456243_+ncRNA_intronic
CAediting_893301chr12_53456276_+ncRNA_intronic
CAediting_893302chr12_53456297_+ncRNA_intronic
CAediting_893303chr12_53456311_+ncRNA_intronic
CAediting_893304chr12_53456370_+ncRNA_intronic
CAediting_893305chr12_53457176_+ncRNA_intronic
CAediting_893306chr12_53457273_+ncRNA_intronic
CAediting_893307chr12_53457404_+ncRNA_intronic
CAediting_893308chr12_53457511_+ncRNA_intronic
CAediting_893309chr12_53457620_+ncRNA_intronic
CAediting_893310chr12_53458058_+ncRNA_intronic
CAediting_893311chr12_53458068_+ncRNA_intronic
CAediting_893312chr12_53458094_+ncRNA_intronic
CAediting_893313chr12_53458095_+ncRNA_intronic
CAediting_893314chr12_53458103_+ncRNA_intronic
CAediting_893315chr12_53458171_+ncRNA_intronic
CAediting_893316chr12_53458190_+ncRNA_intronic
CAediting_893317chr12_53458375_+ncRNA_intronic
CAediting_893318chr12_53458406_+ncRNA_intronic
CAediting_893319chr12_53458447_+ncRNA_intronic
CAediting_893320chr12_53458465_+ncRNA_intronic
CAediting_893321chr12_53458473_+ncRNA_intronic
CAediting_893322chr12_53458756_+ncRNA_intronic
CAediting_893323chr12_53458914_+ncRNA_intronic
CAediting_893324chr12_53458917_+ncRNA_intronic
CAediting_893325chr12_53458927_+ncRNA_intronic
CAediting_893326chr12_53460011_+ncRNA_intronic
CAediting_893327chr12_53460251_+ncRNA_intronic
CAediting_893328chr12_53469002_+ncRNA_intronic
CAediting_893329chr12_53469006_+ncRNA_intronic
CAediting_893330chr12_53469122_+ncRNA_intronic
CAediting_893331chr12_53469164_+ncRNA_intronic
CAediting_893332chr12_53469447_+ncRNA_intronic
CAediting_893333chr12_53469465_+ncRNA_intronic
CAediting_893334chr12_53469541_+ncRNA_intronic
CAediting_893335chr12_53469605_+ncRNA_intronic
CAediting_893336chr12_53469606_+ncRNA_intronic
CAediting_893337chr12_53469627_+ncRNA_intronic
CAediting_893338chr12_53469637_+ncRNA_intronic
CAediting_893339chr12_53469841_+ncRNA_intronic
CAediting_893340chr12_53469842_+ncRNA_intronic
CAediting_893341chr12_53469881_+ncRNA_intronic
CAediting_893342chr12_53469887_+ncRNA_intronic
CAediting_893343chr12_53469929_+ncRNA_intronic
CAediting_893344chr12_53470008_+ncRNA_intronic
CAediting_893345chr12_53470127_+ncRNA_intronic
CAediting_893346chr12_53470135_+ncRNA_intronic
CAediting_893347chr12_53470147_+ncRNA_intronic
CAediting_893348chr12_53470166_+ncRNA_intronic
CAediting_893349chr12_53470200_+ncRNA_intronic
CAediting_893350chr12_53470201_+ncRNA_intronic
CAediting_893351chr12_53470202_+ncRNA_intronic
CAediting_893352chr12_53470213_+ncRNA_intronic
CAediting_893353chr12_53470218_+ncRNA_intronic
CAediting_893354chr12_53470222_+ncRNA_intronic
CAediting_893355chr12_53470226_+ncRNA_intronic
CAediting_893356chr12_53470227_+ncRNA_intronic
CAediting_893357chr12_53470231_+ncRNA_intronic
CAediting_893358chr12_53470235_+ncRNA_intronic
CAediting_893359chr12_53470251_+ncRNA_intronic
CAediting_893360chr12_53470257_+ncRNA_intronic
CAediting_893361chr12_53470258_+ncRNA_intronic
CAediting_893362chr12_53470266_+ncRNA_intronic
CAediting_893363chr12_53470270_+ncRNA_intronic
CAediting_893364chr12_53470272_+ncRNA_intronic
CAediting_893365chr12_53470273_+ncRNA_intronic
CAediting_893366chr12_53470279_+ncRNA_intronic
CAediting_893367chr12_53470288_+ncRNA_intronic
CAediting_893368chr12_53470297_+ncRNA_intronic
CAediting_893369chr12_53470327_+ncRNA_intronic
CAediting_893370chr12_53470365_+ncRNA_intronic
CAediting_893371chr12_53470426_+ncRNA_intronic
CAediting_893372chr12_53470427_+ncRNA_intronic
CAediting_893373chr12_53470428_+ncRNA_intronic
CAediting_893374chr12_53470455_+ncRNA_intronic
CAediting_893375chr12_53470460_+ncRNA_intronic
CAediting_893376chr12_53470462_+ncRNA_intronic
CAediting_893377chr12_53470484_+ncRNA_intronic
CAediting_893378chr12_53470491_+ncRNA_intronic
CAediting_893379chr12_53470498_+ncRNA_intronic
CAediting_893380chr12_53470504_+ncRNA_intronic
CAediting_893381chr12_53470505_+ncRNA_intronic
CAediting_893382chr12_53470509_+ncRNA_intronic
CAediting_893383chr12_53470522_+ncRNA_intronic
CAediting_893384chr12_53470534_+ncRNA_intronic
CAediting_893385chr12_53470544_+ncRNA_intronic
CAediting_893386chr12_53470546_+ncRNA_intronic
CAediting_893387chr12_53470582_+ncRNA_intronic
CAediting_893388chr12_53470594_+ncRNA_intronic
CAediting_893389chr12_53470616_+ncRNA_intronic
CAediting_893390chr12_53470629_+ncRNA_intronic
CAediting_893391chr12_53470646_+ncRNA_intronic
CAediting_893392chr12_53470657_+ncRNA_intronic
CAediting_893393chr12_53470802_+ncRNA_intronic
CAediting_893394chr12_53471302_+ncRNA_intronic
CAediting_893395chr12_53471362_+ncRNA_intronic
CAediting_893396chr12_53471401_+ncRNA_intronic
CAediting_893397chr12_53471402_+ncRNA_intronic
CAediting_893398chr12_53471425_+ncRNA_intronic
CAediting_893399chr12_53473026_+ncRNA_intronic
CAediting_893400chr12_53473040_+ncRNA_intronic
CAediting_893401chr12_53473282_+ncRNA_intronic
CAediting_893402chr12_53473285_+ncRNA_intronic
CAediting_893403chr12_53473357_+ncRNA_intronic
CAediting_893404chr12_53476153_+ncRNA_intronic
CAediting_893405chr12_53477416_+ncRNA_intronic
CAediting_893406chr12_53477482_+ncRNA_intronic
CAediting_893407chr12_53477519_+ncRNA_intronic
CAediting_893408chr12_53477545_+ncRNA_intronic
CAediting_893409chr12_53477551_+ncRNA_intronic
CAediting_893410chr12_53477554_+ncRNA_intronic
CAediting_893411chr12_53477562_+ncRNA_intronic
CAediting_893412chr12_53477578_+ncRNA_intronic
CAediting_893413chr12_53477586_+ncRNA_intronic
CAediting_893414chr12_53478253_+ncRNA_intronic
CAediting_893415chr12_53478261_+ncRNA_intronic
CAediting_893416chr12_53478274_+ncRNA_intronic
CAediting_893417chr12_53478280_+ncRNA_intronic
CAediting_893418chr12_53478300_+ncRNA_intronic
CAediting_893419chr12_53478309_+ncRNA_intronic
CAediting_893420chr12_53478343_+ncRNA_intronic
CAediting_893421chr12_53478348_+ncRNA_intronic
CAediting_893422chr12_53478349_+ncRNA_intronic
CAediting_893423chr12_53478350_+ncRNA_intronic
CAediting_893424chr12_53478352_+ncRNA_intronic
CAediting_893425chr12_53478355_+ncRNA_intronic
CAediting_893426chr12_53478356_+ncRNA_intronic
CAediting_893427chr12_53478357_+ncRNA_intronic
CAediting_893428chr12_53478387_+ncRNA_intronic
CAediting_893429chr12_53478388_+ncRNA_intronic
CAediting_893430chr12_53478397_+ncRNA_intronic
CAediting_893431chr12_53478401_+ncRNA_intronic
CAediting_893432chr12_53478414_+ncRNA_intronic
CAediting_893433chr12_53478420_+ncRNA_intronic
CAediting_893434chr12_53478440_+ncRNA_intronic
CAediting_893435chr12_53478488_+ncRNA_intronic
CAediting_893436chr12_53478526_+ncRNA_intronic
CAediting_893437chr12_53478602_+ncRNA_intronic
CAediting_893438chr12_53478713_+ncRNA_intronic
CAediting_893439chr12_53478717_+ncRNA_intronic
CAediting_893440chr12_53478726_+ncRNA_intronic
CAediting_893441chr12_53478730_+ncRNA_intronic
CAediting_893442chr12_53478755_+ncRNA_intronic
CAediting_893443chr12_53478761_+ncRNA_intronic
CAediting_893444chr12_53478771_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_893299chr12_53456211_+SINEAluAluSg
CAediting_893300chr12_53456243_+SINEAluAluSg
CAediting_893301chr12_53456276_+SINEAluAluSg
CAediting_893302chr12_53456297_+SINEAluAluSg
CAediting_893303chr12_53456311_+SINEAluAluSg
CAediting_893304chr12_53456370_+SINEAluAluSg
CAediting_893305chr12_53457176_+SINEAluAluJr
CAediting_893306chr12_53457273_+SINEAluAluJr
CAediting_893307chr12_53457404_+SINEAluAluJr
CAediting_893308chr12_53457511_+SINEAluAluJr
CAediting_893309chr12_53457620_+SINEAluAluJr
CAediting_893310chr12_53458058_+SINEAluAluSx1
CAediting_893311chr12_53458068_+SINEAluAluSx1
CAediting_893312chr12_53458094_+SINEAluAluSx1
CAediting_893313chr12_53458095_+SINEAluAluSx1
CAediting_893314chr12_53458103_+SINEAluAluSx1
CAediting_893315chr12_53458171_+SINEAluAluSx1
CAediting_893316chr12_53458190_+SINEAluAluSx1
CAediting_893317chr12_53458375_+SINEAluAluSx
CAediting_893318chr12_53458406_+SINEAluAluSx
CAediting_893319chr12_53458447_+SINEAluAluSx
CAediting_893320chr12_53458465_+SINEAluAluSx
CAediting_893321chr12_53458473_+SINEAluAluSx
CAediting_893322chr12_53458756_+SINEAluAluSx1
CAediting_893323chr12_53458914_+SINEAluAluSx1
CAediting_893324chr12_53458917_+SINEAluAluSx1
CAediting_893325chr12_53458927_+SINEAluAluSx1
CAediting_893326chr12_53460011_+SINEAluAluJb
CAediting_893327chr12_53460251_+SINEAluAluJo
CAediting_893328chr12_53469002_+SINEAluAluSp
CAediting_893329chr12_53469006_+SINEAluAluSp
CAediting_893330chr12_53469122_+SINEAluAluSp
CAediting_893331chr12_53469164_+SINEAluAluSp
CAediting_893332chr12_53469447_+SINEAluAluSp
CAediting_893333chr12_53469465_+SINEAluAluSp
CAediting_893334chr12_53469541_+SINEAluAluSp
CAediting_893335chr12_53469605_+SINEAluAluSp
CAediting_893336chr12_53469606_+SINEAluAluSp
CAediting_893337chr12_53469627_+SINEAluAluSp
CAediting_893338chr12_53469637_+SINEAluAluSp
CAediting_893339chr12_53469841_+SINEAluAluSx
CAediting_893340chr12_53469842_+SINEAluAluSx
CAediting_893341chr12_53469881_+SINEAluAluSx
CAediting_893342chr12_53469887_+SINEAluAluSx
CAediting_893343chr12_53469929_+SINEAluAluSx
CAediting_893344chr12_53470008_+SINEAluAluSx
CAediting_893345chr12_53470127_+SINEAluAluSg
CAediting_893346chr12_53470135_+SINEAluAluSg
CAediting_893347chr12_53470147_+SINEAluAluSg
CAediting_893348chr12_53470166_+SINEAluAluSg
CAediting_893349chr12_53470200_+SINEAluAluSg
CAediting_893350chr12_53470201_+SINEAluAluSg
CAediting_893351chr12_53470202_+SINEAluAluSg
CAediting_893352chr12_53470213_+SINEAluAluSg
CAediting_893353chr12_53470218_+SINEAluAluSg
CAediting_893354chr12_53470222_+SINEAluAluSg
CAediting_893355chr12_53470226_+SINEAluAluSg
CAediting_893356chr12_53470227_+SINEAluAluSg
CAediting_893357chr12_53470231_+SINEAluAluSg
CAediting_893358chr12_53470235_+SINEAluAluSg
CAediting_893359chr12_53470251_+SINEAluAluSg
CAediting_893360chr12_53470257_+SINEAluAluSg
CAediting_893361chr12_53470258_+SINEAluAluSg
CAediting_893362chr12_53470266_+SINEAluAluSg
CAediting_893363chr12_53470270_+SINEAluAluSg
CAediting_893364chr12_53470272_+SINEAluAluSg
CAediting_893365chr12_53470273_+SINEAluAluSg
CAediting_893366chr12_53470279_+SINEAluAluSg
CAediting_893367chr12_53470288_+SINEAluAluSg
CAediting_893368chr12_53470297_+SINEAluAluSg
CAediting_893369chr12_53470327_+SINEAluAluSg
CAediting_893370chr12_53470365_+SINEAluAluSg
CAediting_893371chr12_53470426_+SINEAluAluJb
CAediting_893372chr12_53470427_+SINEAluAluJb
CAediting_893373chr12_53470428_+SINEAluAluJb
CAediting_893374chr12_53470455_+SINEAluAluJb
CAediting_893375chr12_53470460_+SINEAluAluJb
CAediting_893376chr12_53470462_+SINEAluAluJb
CAediting_893377chr12_53470484_+SINEAluAluJb
CAediting_893378chr12_53470491_+SINEAluAluJb
CAediting_893379chr12_53470498_+SINEAluAluJb
CAediting_893380chr12_53470504_+SINEAluAluJb
CAediting_893381chr12_53470505_+SINEAluAluJb
CAediting_893382chr12_53470509_+SINEAluAluJb
CAediting_893383chr12_53470522_+SINEAluAluJb
CAediting_893384chr12_53470534_+SINEAluAluJb
CAediting_893385chr12_53470544_+SINEAluAluJb
CAediting_893386chr12_53470546_+SINEAluAluJb
CAediting_893387chr12_53470582_+SINEAluAluJb
CAediting_893388chr12_53470594_+SINEAluAluJb
CAediting_893389chr12_53470616_+SINEAluAluJb
CAediting_893390chr12_53470629_+SINEAluAluJb
CAediting_893391chr12_53470646_+SINEAluAluJb
CAediting_893392chr12_53470657_+SINEAluAluJb
CAediting_893394chr12_53471302_+SINEAluAluSc
CAediting_893395chr12_53471362_+SINEAluAluSc
CAediting_893396chr12_53471401_+SINEAluAluSc
CAediting_893397chr12_53471402_+SINEAluAluSc
CAediting_893398chr12_53471425_+SINEAluAluSc
CAediting_893399chr12_53473026_+SINEAluAluSz
CAediting_893400chr12_53473040_+SINEAluAluSz
CAediting_893401chr12_53473282_+SINEAluAluSc
CAediting_893402chr12_53473285_+SINEAluAluSc
CAediting_893403chr12_53473357_+SINEAluAluSc
CAediting_893405chr12_53477416_+SINEAluAluY
CAediting_893406chr12_53477482_+SINEAluAluY
CAediting_893407chr12_53477519_+SINEAluAluY
CAediting_893408chr12_53477545_+SINEAluAluY
CAediting_893409chr12_53477551_+SINEAluAluY
CAediting_893410chr12_53477554_+SINEAluAluY
CAediting_893411chr12_53477562_+SINEAluAluY
CAediting_893412chr12_53477578_+SINEAluAluY
CAediting_893413chr12_53477586_+SINEAluAluY
CAediting_893414chr12_53478253_+SINEAluAluSq2
CAediting_893415chr12_53478261_+SINEAluAluSq2
CAediting_893416chr12_53478274_+SINEAluAluSq2
CAediting_893417chr12_53478280_+SINEAluAluSq2
CAediting_893418chr12_53478300_+SINEAluAluSq2
CAediting_893419chr12_53478309_+SINEAluAluSq2
CAediting_893420chr12_53478343_+SINEAluAluSq2
CAediting_893421chr12_53478348_+SINEAluAluSq2
CAediting_893422chr12_53478349_+SINEAluAluSq2
CAediting_893423chr12_53478350_+SINEAluAluSq2
CAediting_893424chr12_53478352_+SINEAluAluSq2
CAediting_893425chr12_53478355_+SINEAluAluSq2
CAediting_893426chr12_53478356_+SINEAluAluSq2
CAediting_893427chr12_53478357_+SINEAluAluSq2
CAediting_893428chr12_53478387_+SINEAluAluSq2
CAediting_893429chr12_53478388_+SINEAluAluSq2
CAediting_893430chr12_53478397_+SINEAluAluSq2
CAediting_893431chr12_53478401_+SINEAluAluSq2
CAediting_893432chr12_53478414_+SINEAluAluSq2
CAediting_893433chr12_53478420_+SINEAluAluSq2
CAediting_893434chr12_53478440_+SINEAluAluSq2
CAediting_893435chr12_53478488_+SINEAluAluSq2
CAediting_893436chr12_53478526_+SINEAluAluSx1
CAediting_893437chr12_53478602_+SINEAluAluSx1
CAediting_893438chr12_53478713_+SINEAluAluSx1
CAediting_893439chr12_53478717_+SINEAluAluSx1
CAediting_893440chr12_53478726_+SINEAluAluSx1
CAediting_893441chr12_53478730_+SINEAluAluSx1
CAediting_893442chr12_53478755_+SINEAluAluSx1
CAediting_893443chr12_53478761_+SINEAluAluSx1
CAediting_893444chr12_53478771_+SINEAluAluSx1

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RNA A-to-I editing events in the alternative splicing sites for PCBP2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_893337chr12_53469627_+53469627:534696355SS3+0iAAGGTAGGA9.45GAGGTAGGA8.24

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000197111.14.PCBP2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000197111.14.PCBP2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PCBP2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PCBP2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for PCBP2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_893327chr12_53460251_+ENSG00000197111.14ENST00000550585hsa-miR-182753460248534602558mer-1a5346023853460255148.00-16.19
CAediting_893327chr12_53460251_+ENSG00000197111.14ENST00000550585hsa-miR-4763-3p53460247534602526mer5346023053460253142.00-27.67
CAediting_893327chr12_53460251_+ENSG00000197111.14ENST00000550585hsa-miR-6808-5p53460247534602537mer-m85346023353460254153.00-23.65
CAediting_893327chr12_53460251_+ENSG00000197111.14ENST00000550585hsa-miR-6893-5p53460247534602537mer-m85346023753460254148.00-20.16
CAediting_893327chr12_53460251_+ENSG00000197111.14ENST00000550585hsa-miR-94053460247534602537mer-m85346023453460254141.00-13.84

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_893327chr12_53460251_+ENSG00000197111.14ENST00000550585hsa-let-7i-5p53460248534602558mer-1a5346023453460255149-17.36
CAediting_893327chr12_53460251_+ENSG00000197111.14ENST00000550585hsa-miR-426653460244534602507mer-m85346023653460251140-10.94
CAediting_893326chr12_53460011_+ENSG00000197111.14ENST00000550585hsa-miR-429353460008534600147mer-m85345999953460015140-12.73
CAediting_893327chr12_53460251_+ENSG00000197111.14ENST00000550585hsa-miR-445853460248534602558mer-1a5346023753460255149-18.77
CAediting_893327chr12_53460251_+ENSG00000197111.14ENST00000550585hsa-miR-450053460248534602558mer-1a5346023953460255147-14.54
CAediting_893326chr12_53460011_+ENSG00000197111.14ENST00000550585hsa-miR-7162-3p53460005534600117mer-m85345999453460012150-19.8

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000197111.14ENST00000550585hsa-miR-200b-3p53471771534717788mer-1a5347176053471778147-13.28
CAediting_1229415chr17_67471547_+ENSG00000197111.14ENST00000447282hsa-miR-548aa53480893534808997mer-m85348087653480900154-10.66
CAediting_77128chr1_85133844_+ENSG00000197111.14ENST00000447282hsa-miR-4423-3p53480029534800368mer-1a5348001653480036142-12.79
CAediting_1229415chr17_67471547_+ENSG00000197111.14ENST00000437231hsa-miR-548aa53480893534808997mer-m85348087653480900154-10.66
CAediting_77128chr1_85133844_+ENSG00000197111.14ENST00000437231hsa-miR-4423-3p53480029534800368mer-1a5348001653480036142-12.79
CAediting_1229415chr17_67471547_+ENSG00000197111.14ENST00000455667hsa-miR-548aa53480893534808997mer-m85348087653480900154-10.66
CAediting_77128chr1_85133844_+ENSG00000197111.14ENST00000455667hsa-miR-4423-3p53480029534800368mer-1a5348001653480036142-12.79
CAediting_1368054chr19_46709310_-ENSG00000197111.14ENST00000546652hsa-miR-320e53462535534625417mer-m85346252553462542144-18.61
CAediting_604450chr7_133034877_-ENSG00000197111.14ENST00000546652hsa-miR-365453462533534625397mer-m85346252353462540147-20.68
CAediting_1229413chr17_67471544_+ENSG00000197111.14ENST00000550585hsa-miR-548aa53459971534599777mer-m85345995453459978140-13.44
CAediting_86358chr1_109598906_+ENSG00000197111.14ENST00000550585hsa-miR-197-5p53459998534600058mer-1a5345998353460005140-21.33
CAediting_1399425chr20_1392958_-ENSG00000197111.14ENST00000550585hsa-miR-6869-5p53461050534610578mer-1a5346103653461057142-16.64
CAediting_396018chr5_1062918_-ENSG00000197111.14ENST00000550585hsa-miR-463553460251534602577mer-m85346023853460258149-13.32
CAediting_442554chr5_154685830_+ENSG00000197111.14ENST00000550585hsa-miR-130353460360534603667mer-m85346034853460367151-17.38
CAediting_1368054chr19_46709310_-ENSG00000197111.14ENST00000550585hsa-miR-320e53462535534625417mer-m85346252553462542144-18.61
CAediting_604450chr7_133034877_-ENSG00000197111.14ENST00000550585hsa-miR-365453462533534625397mer-m85346252353462540147-20.68
CAediting_1160181chr17_7017644_-ENSG00000197111.14ENST00000553064hsa-miR-195-3p53475275534752817mer-m85347526153475282147-14.76
CAediting_77128chr1_85133844_+ENSG00000197111.14ENST00000547859hsa-miR-4423-3p53480029534800368mer-1a5348001653480036142-12.79
CAediting_1524209chrX_134546392_-ENSG00000197111.14ENST00000550585hsa-miR-503-5p53471766534717727mer-1a5347175053471772148-26.12
CAediting_468389chr6_31355314_-ENSG00000197111.14ENST00000553064hsa-miR-6891-5p53475234534752407mer-m85347522353475241149-21.87

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229415chr17_67471547_+ENSG00000197111.14ENST00000447282hsa-miR-548aa53479668534796747mer-m85347965153479675140-7.56
CAediting_1229413chr17_67471544_+ENSG00000197111.14ENST00000447282hsa-miR-548aa53479668534796747mer-m85347965153479675140-7.56
CAediting_1229414chr17_67471546_+ENSG00000197111.14ENST00000447282hsa-miR-548aa53479668534796747mer-m85347965153479675140-7.56
CAediting_1229415chr17_67471547_+ENSG00000197111.14ENST00000437231hsa-miR-548aa53479668534796747mer-m85347965153479675140-7.56
CAediting_1229413chr17_67471544_+ENSG00000197111.14ENST00000437231hsa-miR-548aa53479668534796747mer-m85347965153479675140-7.56
CAediting_1229414chr17_67471546_+ENSG00000197111.14ENST00000437231hsa-miR-548aa53479668534796747mer-m85347965153479675140-7.56
CAediting_1229415chr17_67471547_+ENSG00000197111.14ENST00000455667hsa-miR-548aa53479668534796747mer-m85347965153479675140-7.56
CAediting_1229413chr17_67471544_+ENSG00000197111.14ENST00000455667hsa-miR-548aa53479668534796747mer-m85347965153479675140-7.56
CAediting_1229414chr17_67471546_+ENSG00000197111.14ENST00000455667hsa-miR-548aa53479668534796747mer-m85347965153479675140-7.56
CAediting_1229415chr17_67471547_+ENSG00000197111.14ENST00000550585hsa-miR-548aa53479668534796747mer-m85347965153479675140-7.56
CAediting_1229415chr17_67471547_+ENSG00000197111.14ENST00000547859hsa-miR-548aa53479668534796747mer-m85347965153479675140-7.56

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PCBP2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for PCBP2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for PCBP2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for PCBP2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for PCBP2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PCBP2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource