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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: PBX1 (CAeditome ID:5087)

Gene summary for PBX1

check button Gene summary
Gene informationGene symbol

PBX1

Gene ID

5087

Gene namePBX homeobox 1
SynonymsCAKUHED
Cytomap

1q23.3

Type of geneprotein-coding
Descriptionpre-B-cell leukemia transcription factor 1homeobox protein PBX1homeobox protein PRLpre-B-cell leukemia homeobox 1
Modification date20210518
UniProtAcc

P40424

Context- 32565927(PBX1 is a valuable prognostic biomarker for patients with breast cancer)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
PBX1

GO:0000977

Pre-B-cell leukemia transcription factor 1

9079637

PBX1

GO:0000976

Pre-B-cell leukemia transcription factor 1

9191052

PBX1

GO:0003677

Pre-B-cell leukemia transcription factor 1

10052460

PBX1

GO:0003677

Pre-B-cell leukemia transcription factor 1

12412021

PBX1

GO:1990837

Pre-B-cell leukemia transcription factor 1

28473536

PBX1

GO:1990837

Pre-B-cell leukemia transcription factor 1

7791786

PBX1

GO:0005634

Pre-B-cell leukemia transcription factor 1

18973687

PBX1

GO:0005634

Pre-B-cell leukemia transcription factor 1

28270404

PBX1

GO:0005654

Pre-B-cell leukemia transcription factor 1

0000052

PBX1

GO:0005737

Pre-B-cell leukemia transcription factor 1

18973687

PBX1

GO:0090575

Pre-B-cell leukemia transcription factor 1

9079637


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RNA A-to-I events for PBX1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000185630.17

check button RNA A-to-I editing events in Cancer.
CAediting_118209(164571984, +), CAediting_118210(164572000, +), CAediting_118211(164572024, +), CAediting_118212(164572081, +), CAediting_118213(164572090, +), CAediting_118214(164573618, +), CAediting_118215(164573669, +), CAediting_118216(164573683, +), CAediting_118217(164573720, +), CAediting_118218(164574718, +), CAediting_118219(164574772, +), CAediting_118220(164574781, +), CAediting_118221(164574786, +), CAediting_118222(164574795, +), CAediting_118223(164574817, +), CAediting_118224(164574821, +), CAediting_118225(164574822, +), CAediting_118226(164574835, +), CAediting_118227(164574855, +), CAediting_118228(164574861, +), CAediting_118229(164574862, +), CAediting_118230(164574867, +), CAediting_118231(164574868, +), CAediting_118232(164574871, +), CAediting_118233(164574888, +), CAediting_118234(164574902, +), CAediting_118235(164574903, +), CAediting_118236(164574910, +), CAediting_118237(164574923, +), CAediting_118238(164584222, +), CAediting_118239(164589477, +), CAediting_118240(164589580, +), CAediting_118241(164589960, +), CAediting_118242(164590026, +), CAediting_118243(164590123, +), CAediting_118244(164590145, +), CAediting_118245(164590146, +), CAediting_118246(164590919, +), CAediting_118247(164590962, +), CAediting_118248(164590974, +), CAediting_118249(164590984, +), CAediting_118250(164591288, +), CAediting_118251(164592983, +), CAediting_118252(164593038, +), CAediting_118253(164593087, +), CAediting_118254(164594492, +), CAediting_118255(164594505, +), CAediting_118256(164600283, +), CAediting_118257(164600326, +), CAediting_118258(164600391, +), CAediting_118259(164600404, +), CAediting_118260(164600454, +), CAediting_118261(164600483, +), CAediting_118262(164600488, +), CAediting_118263(164600492, +), CAediting_118264(164600501, +), CAediting_118265(164600510, +), CAediting_118266(164600511, +), CAediting_118267(164600523, +), CAediting_118268(164600981, +), CAediting_118269(164600982, +), CAediting_118270(164600987, +), CAediting_118271(164600998, +), CAediting_118272(164601004, +), CAediting_118273(164601012, +), CAediting_118274(164601017, +), CAediting_118275(164601022, +), CAediting_118276(164601029, +), CAediting_118277(164601032, +), CAediting_118278(164601043, +), CAediting_118279(164601048, +), CAediting_118280(164601049, +), CAediting_118281(164601052, +), CAediting_118282(164601061, +), CAediting_118283(164601062, +), CAediting_118284(164601063, +), CAediting_118285(164601078, +), CAediting_118286(164601079, +), CAediting_118287(164601080, +), CAediting_118288(164601081, +), CAediting_118289(164601083, +), CAediting_118290(164601086, +), CAediting_118291(164601087, +), CAediting_118292(164601088, +), CAediting_118293(164601089, +), CAediting_118294(164601092, +), CAediting_118295(164601124, +), CAediting_118296(164601128, +), CAediting_118297(164601143, +), CAediting_118298(164601156, +), CAediting_118299(164601157, +), CAediting_118300(164601164, +), CAediting_118301(164601177, +), CAediting_118302(164601181, +), CAediting_118303(164601186, +), CAediting_118304(164601188, +), CAediting_118305(164601201, +), CAediting_118306(164601206, +), CAediting_118307(164601218, +), CAediting_118308(164601223, +), CAediting_118309(164601224, +), CAediting_118310(164603980, +), CAediting_118311(164604155, +), CAediting_118312(164606212, +), CAediting_118313(164606256, +), CAediting_118314(164606289, +), CAediting_118315(164606294, +), CAediting_118316(164606337, +), CAediting_118317(164606343, +), CAediting_118318(164606369, +), CAediting_118319(164619896, +), CAediting_118320(164619918, +), CAediting_118321(164619919, +), CAediting_118322(164619941, +), CAediting_118323(164620011, +), CAediting_118324(164620028, +), CAediting_118325(164620031, +), CAediting_118326(164620046, +), CAediting_118327(164620059, +), CAediting_118328(164620064, +), CAediting_118329(164620072, +), CAediting_118330(164620108, +), CAediting_118331(164620800, +), CAediting_118332(164621118, +), CAediting_118333(164621169, +), CAediting_118334(164621239, +), CAediting_118335(164621249, +), CAediting_118336(164622954, +), CAediting_118337(164622998, +), CAediting_118338(164623081, +), CAediting_118339(164650409, +), CAediting_118340(164652121, +), CAediting_118341(164652127, +), CAediting_118342(164652132, +), CAediting_118343(164652158, +), CAediting_118344(164652175, +), CAediting_118345(164652184, +), CAediting_118346(164652187, +), CAediting_118347(164652192, +), CAediting_118348(164652197, +), CAediting_118349(164652199, +), CAediting_118350(164652200, +), CAediting_118351(164652207, +), CAediting_118352(164652996, +), CAediting_118353(164653006, +), CAediting_118354(164653008, +), CAediting_118355(164653141, +), CAediting_118356(164653572, +), CAediting_118357(164653574, +), CAediting_118358(164653606, +), CAediting_118359(164653609, +), CAediting_118360(164653610, +), CAediting_118361(164653611, +), CAediting_118362(164653612, +), CAediting_118363(164653613, +), CAediting_118364(164653617, +), CAediting_118365(164653618, +), CAediting_118366(164653619, +), CAediting_118367(164653647, +), CAediting_118368(164653649, +), CAediting_118369(164653650, +), CAediting_118370(164653671, +), CAediting_118371(164653672, +), CAediting_118372(164653676, +), CAediting_118373(164653690, +), CAediting_118374(164653699, +), CAediting_118375(164653715, +), CAediting_118376(164653719, +), CAediting_118377(164653720, +), CAediting_118378(164655178, +), CAediting_118379(164655347, +), CAediting_118380(164661556, +), CAediting_118381(164661566, +), CAediting_118382(164661591, +), CAediting_118383(164661592, +), CAediting_118384(164661610, +), CAediting_118385(164661624, +), CAediting_118386(164661661, +), CAediting_118387(164661670, +), CAediting_118388(164661688, +), CAediting_118389(164661701, +), CAediting_118390(164662062, +), CAediting_118391(164662063, +), CAediting_118392(164662070, +), CAediting_118393(164662101, +), CAediting_118394(164662111, +), CAediting_118395(164662116, +), CAediting_118396(164662170, +), CAediting_118397(164662175, +), CAediting_118398(164662179, +), CAediting_118399(164662205, +), CAediting_118400(164662206, +), CAediting_118401(164662215, +), CAediting_118402(164662232, +), CAediting_118403(164662275, +), CAediting_118404(164662276, +), CAediting_118405(164662305, +), CAediting_118406(164681036, +), CAediting_118407(164681049, +), CAediting_118408(164681054, +), CAediting_118409(164681097, +), CAediting_118410(164681098, +), CAediting_118411(164683841, +), CAediting_118412(164683849, +), CAediting_118413(164683855, +), CAediting_118414(164683858, +), CAediting_118415(164683888, +), CAediting_118416(164683932, +), CAediting_118417(164683935, +), CAediting_118418(164683943, +), CAediting_118419(164683947, +), CAediting_118420(164683951, +), CAediting_118421(164683958, +), CAediting_118422(164683959, +), CAediting_118423(164684039, +), CAediting_118424(164684040, +), CAediting_118425(164684046, +), CAediting_118426(164684080, +), CAediting_118427(164684083, +), CAediting_118428(164684092, +), CAediting_118429(164684095, +), CAediting_118430(164686780, +), CAediting_118431(164686801, +), CAediting_118432(164686804, +), CAediting_118433(164686805, +), CAediting_118434(164686810, +), CAediting_118435(164686889, +), CAediting_118436(164686901, +), CAediting_118437(164687285, +), CAediting_118438(164687289, +), CAediting_118439(164687300, +), CAediting_118440(164687333, +), CAediting_118441(164687360, +), CAediting_118442(164687385, +), CAediting_118443(164687386, +), CAediting_118444(164687400, +), CAediting_118445(164687402, +), CAediting_118446(164687403, +), CAediting_118447(164687404, +), CAediting_118448(164687406, +), CAediting_118449(164687409, +), CAediting_118450(164687411, +), CAediting_118451(164687412, +), CAediting_118452(164687415, +), CAediting_118453(164687419, +), CAediting_118454(164687439, +), CAediting_118455(164687447, +), CAediting_118456(164687451, +), CAediting_118457(164687505, +), CAediting_118458(164687508, +), CAediting_118459(164687509, +), CAediting_118460(164687516, +), CAediting_118461(164687529, +), CAediting_118462(164690535, +), CAediting_118463(164690538, +), CAediting_118464(164690557, +), CAediting_118465(164690581, +), CAediting_118466(164690585, +), CAediting_118467(164691132, +), CAediting_118468(164738355, +), CAediting_118469(164738386, +), CAediting_118470(164738419, +), CAediting_118471(164738427, +), CAediting_118472(164738489, +), CAediting_118473(164738540, +), CAediting_118474(164738541, +), CAediting_118475(164742287, +), CAediting_118476(164742427, +), CAediting_118477(164746682, +), CAediting_118478(164749921, +), CAediting_118479(164749953, +), CAediting_118480(164749989, +), CAediting_118481(164751235, +), CAediting_118482(164751681, +), CAediting_118483(164751711, +), CAediting_118484(164751765, +), CAediting_118485(164768933, +), CAediting_118486(164768967, +), CAediting_118487(164768980, +), CAediting_118488(164769034, +), CAediting_118489(164778582, +), CAediting_118490(164793906, +), CAediting_118491(164793914, +), CAediting_118492(164793923, +),

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RNA editing positional annotations for PBX1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_118209chr1_164571984_+ncRNA_intronic
CAediting_118210chr1_164572000_+ncRNA_intronic
CAediting_118211chr1_164572024_+ncRNA_intronic
CAediting_118212chr1_164572081_+ncRNA_intronic
CAediting_118213chr1_164572090_+ncRNA_intronic
CAediting_118214chr1_164573618_+ncRNA_intronic
CAediting_118215chr1_164573669_+ncRNA_intronic
CAediting_118216chr1_164573683_+ncRNA_intronic
CAediting_118217chr1_164573720_+ncRNA_intronic
CAediting_118218chr1_164574718_+ncRNA_intronic
CAediting_118219chr1_164574772_+ncRNA_intronic
CAediting_118220chr1_164574781_+ncRNA_intronic
CAediting_118221chr1_164574786_+ncRNA_intronic
CAediting_118222chr1_164574795_+ncRNA_intronic
CAediting_118223chr1_164574817_+ncRNA_intronic
CAediting_118224chr1_164574821_+ncRNA_intronic
CAediting_118225chr1_164574822_+ncRNA_intronic
CAediting_118226chr1_164574835_+ncRNA_intronic
CAediting_118227chr1_164574855_+ncRNA_intronic
CAediting_118228chr1_164574861_+ncRNA_intronic
CAediting_118229chr1_164574862_+ncRNA_intronic
CAediting_118230chr1_164574867_+ncRNA_intronic
CAediting_118231chr1_164574868_+ncRNA_intronic
CAediting_118232chr1_164574871_+ncRNA_intronic
CAediting_118233chr1_164574888_+ncRNA_intronic
CAediting_118234chr1_164574902_+ncRNA_intronic
CAediting_118235chr1_164574903_+ncRNA_intronic
CAediting_118236chr1_164574910_+ncRNA_intronic
CAediting_118237chr1_164574923_+ncRNA_intronic
CAediting_118238chr1_164584222_+ncRNA_intronic
CAediting_118239chr1_164589477_+ncRNA_intronic
CAediting_118240chr1_164589580_+ncRNA_exonic
CAediting_118241chr1_164589960_+ncRNA_intronic
CAediting_118242chr1_164590026_+ncRNA_intronic
CAediting_118243chr1_164590123_+ncRNA_intronic
CAediting_118244chr1_164590145_+ncRNA_intronic
CAediting_118245chr1_164590146_+ncRNA_intronic
CAediting_118246chr1_164590919_+ncRNA_intronic
CAediting_118247chr1_164590962_+ncRNA_intronic
CAediting_118248chr1_164590974_+ncRNA_intronic
CAediting_118249chr1_164590984_+ncRNA_intronic
CAediting_118250chr1_164591288_+ncRNA_intronic
CAediting_118251chr1_164592983_+ncRNA_intronic
CAediting_118252chr1_164593038_+ncRNA_intronic
CAediting_118253chr1_164593087_+ncRNA_intronic
CAediting_118254chr1_164594492_+ncRNA_intronic
CAediting_118255chr1_164594505_+ncRNA_intronic
CAediting_118256chr1_164600283_+ncRNA_intronic
CAediting_118257chr1_164600326_+ncRNA_intronic
CAediting_118258chr1_164600391_+ncRNA_intronic
CAediting_118259chr1_164600404_+ncRNA_intronic
CAediting_118260chr1_164600454_+ncRNA_intronic
CAediting_118261chr1_164600483_+ncRNA_intronic
CAediting_118262chr1_164600488_+ncRNA_intronic
CAediting_118263chr1_164600492_+ncRNA_intronic
CAediting_118264chr1_164600501_+ncRNA_intronic
CAediting_118265chr1_164600510_+ncRNA_intronic
CAediting_118266chr1_164600511_+ncRNA_intronic
CAediting_118267chr1_164600523_+ncRNA_intronic
CAediting_118268chr1_164600981_+ncRNA_intronic
CAediting_118269chr1_164600982_+ncRNA_intronic
CAediting_118270chr1_164600987_+ncRNA_intronic
CAediting_118271chr1_164600998_+ncRNA_intronic
CAediting_118272chr1_164601004_+ncRNA_intronic
CAediting_118273chr1_164601012_+ncRNA_intronic
CAediting_118274chr1_164601017_+ncRNA_intronic
CAediting_118275chr1_164601022_+ncRNA_intronic
CAediting_118276chr1_164601029_+ncRNA_intronic
CAediting_118277chr1_164601032_+ncRNA_intronic
CAediting_118278chr1_164601043_+ncRNA_intronic
CAediting_118279chr1_164601048_+ncRNA_intronic
CAediting_118280chr1_164601049_+ncRNA_intronic
CAediting_118281chr1_164601052_+ncRNA_intronic
CAediting_118282chr1_164601061_+ncRNA_intronic
CAediting_118283chr1_164601062_+ncRNA_intronic
CAediting_118284chr1_164601063_+ncRNA_intronic
CAediting_118285chr1_164601078_+ncRNA_intronic
CAediting_118286chr1_164601079_+ncRNA_intronic
CAediting_118287chr1_164601080_+ncRNA_intronic
CAediting_118288chr1_164601081_+ncRNA_intronic
CAediting_118289chr1_164601083_+ncRNA_intronic
CAediting_118290chr1_164601086_+ncRNA_intronic
CAediting_118291chr1_164601087_+ncRNA_intronic
CAediting_118292chr1_164601088_+ncRNA_intronic
CAediting_118293chr1_164601089_+ncRNA_intronic
CAediting_118294chr1_164601092_+ncRNA_intronic
CAediting_118295chr1_164601124_+ncRNA_intronic
CAediting_118296chr1_164601128_+ncRNA_intronic
CAediting_118297chr1_164601143_+ncRNA_intronic
CAediting_118298chr1_164601156_+ncRNA_intronic
CAediting_118299chr1_164601157_+ncRNA_intronic
CAediting_118300chr1_164601164_+ncRNA_intronic
CAediting_118301chr1_164601177_+ncRNA_intronic
CAediting_118302chr1_164601181_+ncRNA_intronic
CAediting_118303chr1_164601186_+ncRNA_intronic
CAediting_118304chr1_164601188_+ncRNA_intronic
CAediting_118305chr1_164601201_+ncRNA_intronic
CAediting_118306chr1_164601206_+ncRNA_intronic
CAediting_118307chr1_164601218_+ncRNA_intronic
CAediting_118308chr1_164601223_+ncRNA_intronic
CAediting_118309chr1_164601224_+ncRNA_intronic
CAediting_118310chr1_164603980_+ncRNA_intronic
CAediting_118311chr1_164604155_+ncRNA_intronic
CAediting_118312chr1_164606212_+ncRNA_intronic
CAediting_118313chr1_164606256_+ncRNA_intronic
CAediting_118314chr1_164606289_+ncRNA_intronic
CAediting_118315chr1_164606294_+ncRNA_intronic
CAediting_118316chr1_164606337_+ncRNA_intronic
CAediting_118317chr1_164606343_+ncRNA_intronic
CAediting_118318chr1_164606369_+ncRNA_intronic
CAediting_118319chr1_164619896_+ncRNA_intronic
CAediting_118320chr1_164619918_+ncRNA_intronic
CAediting_118321chr1_164619919_+ncRNA_intronic
CAediting_118322chr1_164619941_+ncRNA_intronic
CAediting_118323chr1_164620011_+ncRNA_intronic
CAediting_118324chr1_164620028_+ncRNA_intronic
CAediting_118325chr1_164620031_+ncRNA_intronic
CAediting_118326chr1_164620046_+ncRNA_intronic
CAediting_118327chr1_164620059_+ncRNA_intronic
CAediting_118328chr1_164620064_+ncRNA_intronic
CAediting_118329chr1_164620072_+ncRNA_intronic
CAediting_118330chr1_164620108_+ncRNA_intronic
CAediting_118331chr1_164620800_+ncRNA_intronic
CAediting_118332chr1_164621118_+ncRNA_intronic
CAediting_118333chr1_164621169_+ncRNA_intronic
CAediting_118334chr1_164621239_+ncRNA_intronic
CAediting_118335chr1_164621249_+ncRNA_intronic
CAediting_118336chr1_164622954_+ncRNA_intronic
CAediting_118337chr1_164622998_+ncRNA_intronic
CAediting_118338chr1_164623081_+ncRNA_intronic
CAediting_118339chr1_164650409_+ncRNA_intronic
CAediting_118340chr1_164652121_+ncRNA_exonic
CAediting_118341chr1_164652127_+ncRNA_exonic
CAediting_118342chr1_164652132_+ncRNA_exonic
CAediting_118343chr1_164652158_+ncRNA_intronic
CAediting_118344chr1_164652175_+ncRNA_intronic
CAediting_118345chr1_164652184_+ncRNA_intronic
CAediting_118346chr1_164652187_+ncRNA_intronic
CAediting_118347chr1_164652192_+ncRNA_intronic
CAediting_118348chr1_164652197_+ncRNA_intronic
CAediting_118349chr1_164652199_+ncRNA_intronic
CAediting_118350chr1_164652200_+ncRNA_intronic
CAediting_118351chr1_164652207_+ncRNA_intronic
CAediting_118352chr1_164652996_+ncRNA_intronic
CAediting_118353chr1_164653006_+ncRNA_intronic
CAediting_118354chr1_164653008_+ncRNA_intronic
CAediting_118355chr1_164653141_+ncRNA_intronic
CAediting_118356chr1_164653572_+ncRNA_intronic
CAediting_118357chr1_164653574_+ncRNA_intronic
CAediting_118358chr1_164653606_+ncRNA_intronic
CAediting_118359chr1_164653609_+ncRNA_intronic
CAediting_118360chr1_164653610_+ncRNA_intronic
CAediting_118361chr1_164653611_+ncRNA_intronic
CAediting_118362chr1_164653612_+ncRNA_intronic
CAediting_118363chr1_164653613_+ncRNA_intronic
CAediting_118364chr1_164653617_+ncRNA_intronic
CAediting_118365chr1_164653618_+ncRNA_intronic
CAediting_118366chr1_164653619_+ncRNA_intronic
CAediting_118367chr1_164653647_+ncRNA_intronic
CAediting_118368chr1_164653649_+ncRNA_intronic
CAediting_118369chr1_164653650_+ncRNA_intronic
CAediting_118370chr1_164653671_+ncRNA_intronic
CAediting_118371chr1_164653672_+ncRNA_intronic
CAediting_118372chr1_164653676_+ncRNA_intronic
CAediting_118373chr1_164653690_+ncRNA_intronic
CAediting_118374chr1_164653699_+ncRNA_intronic
CAediting_118375chr1_164653715_+ncRNA_intronic
CAediting_118376chr1_164653719_+ncRNA_intronic
CAediting_118377chr1_164653720_+ncRNA_intronic
CAediting_118378chr1_164655178_+ncRNA_intronic
CAediting_118379chr1_164655347_+ncRNA_intronic
CAediting_118380chr1_164661556_+ncRNA_intronic
CAediting_118381chr1_164661566_+ncRNA_intronic
CAediting_118382chr1_164661591_+ncRNA_intronic
CAediting_118383chr1_164661592_+ncRNA_intronic
CAediting_118384chr1_164661610_+ncRNA_intronic
CAediting_118385chr1_164661624_+ncRNA_intronic
CAediting_118386chr1_164661661_+ncRNA_intronic
CAediting_118387chr1_164661670_+ncRNA_intronic
CAediting_118388chr1_164661688_+ncRNA_intronic
CAediting_118389chr1_164661701_+ncRNA_intronic
CAediting_118390chr1_164662062_+ncRNA_intronic
CAediting_118391chr1_164662063_+ncRNA_intronic
CAediting_118392chr1_164662070_+ncRNA_intronic
CAediting_118393chr1_164662101_+ncRNA_intronic
CAediting_118394chr1_164662111_+ncRNA_intronic
CAediting_118395chr1_164662116_+ncRNA_intronic
CAediting_118396chr1_164662170_+ncRNA_intronic
CAediting_118397chr1_164662175_+ncRNA_intronic
CAediting_118398chr1_164662179_+ncRNA_intronic
CAediting_118399chr1_164662205_+ncRNA_intronic
CAediting_118400chr1_164662206_+ncRNA_intronic
CAediting_118401chr1_164662215_+ncRNA_intronic
CAediting_118402chr1_164662232_+ncRNA_intronic
CAediting_118403chr1_164662275_+ncRNA_intronic
CAediting_118404chr1_164662276_+ncRNA_intronic
CAediting_118405chr1_164662305_+ncRNA_intronic
CAediting_118406chr1_164681036_+ncRNA_intronic
CAediting_118407chr1_164681049_+ncRNA_intronic
CAediting_118408chr1_164681054_+ncRNA_intronic
CAediting_118409chr1_164681097_+ncRNA_intronic
CAediting_118410chr1_164681098_+ncRNA_intronic
CAediting_118411chr1_164683841_+ncRNA_exonic
CAediting_118412chr1_164683849_+ncRNA_exonic
CAediting_118413chr1_164683855_+ncRNA_exonic
CAediting_118414chr1_164683858_+ncRNA_exonic
CAediting_118415chr1_164683888_+ncRNA_exonic
CAediting_118416chr1_164683932_+ncRNA_exonic
CAediting_118417chr1_164683935_+ncRNA_exonic
CAediting_118418chr1_164683943_+ncRNA_exonic
CAediting_118419chr1_164683947_+ncRNA_exonic
CAediting_118420chr1_164683951_+ncRNA_exonic
CAediting_118421chr1_164683958_+ncRNA_exonic
CAediting_118422chr1_164683959_+ncRNA_exonic
CAediting_118423chr1_164684039_+ncRNA_exonic
CAediting_118424chr1_164684040_+ncRNA_exonic
CAediting_118425chr1_164684046_+ncRNA_exonic
CAediting_118426chr1_164684080_+ncRNA_exonic
CAediting_118427chr1_164684083_+ncRNA_exonic
CAediting_118428chr1_164684092_+ncRNA_exonic
CAediting_118429chr1_164684095_+ncRNA_exonic
CAediting_118430chr1_164686780_+ncRNA_intronic
CAediting_118431chr1_164686801_+ncRNA_intronic
CAediting_118432chr1_164686804_+ncRNA_intronic
CAediting_118433chr1_164686805_+ncRNA_intronic
CAediting_118434chr1_164686810_+ncRNA_intronic
CAediting_118435chr1_164686889_+ncRNA_intronic
CAediting_118436chr1_164686901_+ncRNA_intronic
CAediting_118437chr1_164687285_+ncRNA_intronic
CAediting_118438chr1_164687289_+ncRNA_intronic
CAediting_118439chr1_164687300_+ncRNA_intronic
CAediting_118440chr1_164687333_+ncRNA_intronic
CAediting_118441chr1_164687360_+ncRNA_intronic
CAediting_118442chr1_164687385_+ncRNA_intronic
CAediting_118443chr1_164687386_+ncRNA_intronic
CAediting_118444chr1_164687400_+ncRNA_intronic
CAediting_118445chr1_164687402_+ncRNA_intronic
CAediting_118446chr1_164687403_+ncRNA_intronic
CAediting_118447chr1_164687404_+ncRNA_intronic
CAediting_118448chr1_164687406_+ncRNA_intronic
CAediting_118449chr1_164687409_+ncRNA_intronic
CAediting_118450chr1_164687411_+ncRNA_intronic
CAediting_118451chr1_164687412_+ncRNA_intronic
CAediting_118452chr1_164687415_+ncRNA_intronic
CAediting_118453chr1_164687419_+ncRNA_intronic
CAediting_118454chr1_164687439_+ncRNA_intronic
CAediting_118455chr1_164687447_+ncRNA_intronic
CAediting_118456chr1_164687451_+ncRNA_intronic
CAediting_118457chr1_164687505_+ncRNA_intronic
CAediting_118458chr1_164687508_+ncRNA_intronic
CAediting_118459chr1_164687509_+ncRNA_intronic
CAediting_118460chr1_164687516_+ncRNA_intronic
CAediting_118461chr1_164687529_+ncRNA_intronic
CAediting_118462chr1_164690535_+ncRNA_intronic
CAediting_118463chr1_164690538_+ncRNA_intronic
CAediting_118464chr1_164690557_+ncRNA_intronic
CAediting_118465chr1_164690581_+ncRNA_intronic
CAediting_118466chr1_164690585_+ncRNA_intronic
CAediting_118467chr1_164691132_+ncRNA_intronic
CAediting_118468chr1_164738355_+ncRNA_intronic
CAediting_118469chr1_164738386_+ncRNA_intronic
CAediting_118470chr1_164738419_+ncRNA_intronic
CAediting_118471chr1_164738427_+ncRNA_intronic
CAediting_118472chr1_164738489_+ncRNA_intronic
CAediting_118473chr1_164738540_+ncRNA_intronic
CAediting_118474chr1_164738541_+ncRNA_intronic
CAediting_118475chr1_164742287_+ncRNA_intronic
CAediting_118476chr1_164742427_+ncRNA_intronic
CAediting_118477chr1_164746682_+ncRNA_intronic
CAediting_118478chr1_164749921_+ncRNA_intronic
CAediting_118479chr1_164749953_+ncRNA_intronic
CAediting_118480chr1_164749989_+ncRNA_intronic
CAediting_118481chr1_164751235_+ncRNA_intronic
CAediting_118482chr1_164751681_+ncRNA_intronic
CAediting_118483chr1_164751711_+ncRNA_intronic
CAediting_118484chr1_164751765_+ncRNA_intronic
CAediting_118485chr1_164768933_+ncRNA_intronic
CAediting_118486chr1_164768967_+ncRNA_intronic
CAediting_118487chr1_164768980_+ncRNA_intronic
CAediting_118488chr1_164769034_+ncRNA_intronic
CAediting_118489chr1_164778582_+ncRNA_intronic
CAediting_118490chr1_164793906_+ncRNA_intronic
CAediting_118491chr1_164793914_+ncRNA_intronic
CAediting_118492chr1_164793923_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_118209chr1_164571984_+SINEAluAluSz
CAediting_118210chr1_164572000_+SINEAluAluSz
CAediting_118211chr1_164572024_+SINEAluAluSz
CAediting_118212chr1_164572081_+SINEAluAluSz
CAediting_118213chr1_164572090_+SINEAluAluSz
CAediting_118214chr1_164573618_+SINEAluAluSx1
CAediting_118215chr1_164573669_+SINEAluAluSx1
CAediting_118216chr1_164573683_+SINEAluAluSx1
CAediting_118217chr1_164573720_+SINEAluAluSx1
CAediting_118218chr1_164574718_+SINEAluAluSx1
CAediting_118219chr1_164574772_+SINEAluAluSx1
CAediting_118220chr1_164574781_+SINEAluAluSx1
CAediting_118221chr1_164574786_+SINEAluAluSx1
CAediting_118222chr1_164574795_+SINEAluAluSx1
CAediting_118223chr1_164574817_+SINEAluAluSx1
CAediting_118224chr1_164574821_+SINEAluAluSx1
CAediting_118225chr1_164574822_+SINEAluAluSx1
CAediting_118226chr1_164574835_+SINEAluAluSx1
CAediting_118227chr1_164574855_+SINEAluAluSx1
CAediting_118228chr1_164574861_+SINEAluAluSx1
CAediting_118229chr1_164574862_+SINEAluAluSx1
CAediting_118230chr1_164574867_+SINEAluAluSx1
CAediting_118231chr1_164574868_+SINEAluAluSx1
CAediting_118232chr1_164574871_+SINEAluAluSx1
CAediting_118233chr1_164574888_+SINEAluAluSx1
CAediting_118234chr1_164574902_+SINEAluAluSx1
CAediting_118235chr1_164574903_+SINEAluAluSx1
CAediting_118236chr1_164574910_+SINEAluAluSx1
CAediting_118237chr1_164574923_+SINEAluAluSx1
CAediting_118238chr1_164584222_+SINEAluFLAM_A
CAediting_118239chr1_164589477_+DNADNAMER135
CAediting_118240chr1_164589580_+DNADNAMER135
CAediting_118241chr1_164589960_+SINEAluAluJb
CAediting_118242chr1_164590026_+SINEAluAluJb
CAediting_118243chr1_164590123_+SINEAluAluJb
CAediting_118244chr1_164590145_+SINEAluAluJb
CAediting_118245chr1_164590146_+SINEAluAluJb
CAediting_118246chr1_164590919_+SINEAluAluSc8
CAediting_118247chr1_164590962_+SINEAluAluSc8
CAediting_118248chr1_164590974_+SINEAluAluSc8
CAediting_118249chr1_164590984_+SINEAluAluSc8
CAediting_118250chr1_164591288_+SINEAluAluSz
CAediting_118251chr1_164592983_+SINEAluAluSz6
CAediting_118252chr1_164593038_+SINEAluAluSz6
CAediting_118253chr1_164593087_+SINEAluAluSz6
CAediting_118254chr1_164594492_+SINEAluAluSq2
CAediting_118255chr1_164594505_+SINEAluAluSq2
CAediting_118256chr1_164600283_+SINEAluAluSx1
CAediting_118257chr1_164600326_+SINEAluAluSx1
CAediting_118258chr1_164600391_+SINEAluAluSx1
CAediting_118259chr1_164600404_+SINEAluAluSx1
CAediting_118260chr1_164600454_+SINEAluAluSx1
CAediting_118261chr1_164600483_+SINEAluAluSx1
CAediting_118262chr1_164600488_+SINEAluAluSx1
CAediting_118263chr1_164600492_+SINEAluAluSx1
CAediting_118264chr1_164600501_+SINEAluAluSx1
CAediting_118265chr1_164600510_+SINEAluAluSx1
CAediting_118266chr1_164600511_+SINEAluAluSx1
CAediting_118267chr1_164600523_+SINEAluAluSx1
CAediting_118268chr1_164600981_+SINEAluAluSx1
CAediting_118269chr1_164600982_+SINEAluAluSx1
CAediting_118270chr1_164600987_+SINEAluAluSx1
CAediting_118271chr1_164600998_+SINEAluAluSx1
CAediting_118272chr1_164601004_+SINEAluAluSx1
CAediting_118273chr1_164601012_+SINEAluAluSx1
CAediting_118274chr1_164601017_+SINEAluAluSx1
CAediting_118275chr1_164601022_+SINEAluAluSx1
CAediting_118276chr1_164601029_+SINEAluAluSx1
CAediting_118277chr1_164601032_+SINEAluAluSx1
CAediting_118278chr1_164601043_+SINEAluAluSx1
CAediting_118279chr1_164601048_+SINEAluAluSx1
CAediting_118280chr1_164601049_+SINEAluAluSx1
CAediting_118281chr1_164601052_+SINEAluAluSx1
CAediting_118282chr1_164601061_+SINEAluAluSx1
CAediting_118283chr1_164601062_+SINEAluAluSx1
CAediting_118284chr1_164601063_+SINEAluAluSx1
CAediting_118285chr1_164601078_+SINEAluAluSx1
CAediting_118286chr1_164601079_+SINEAluAluSx1
CAediting_118287chr1_164601080_+SINEAluAluSx1
CAediting_118288chr1_164601081_+SINEAluAluSx1
CAediting_118289chr1_164601083_+SINEAluAluSx1
CAediting_118290chr1_164601086_+SINEAluAluSx1
CAediting_118291chr1_164601087_+SINEAluAluSx1
CAediting_118292chr1_164601088_+SINEAluAluSx1
CAediting_118293chr1_164601089_+SINEAluAluSx1
CAediting_118294chr1_164601092_+SINEAluAluSx1
CAediting_118295chr1_164601124_+SINEAluAluSx1
CAediting_118296chr1_164601128_+SINEAluAluSx1
CAediting_118297chr1_164601143_+SINEAluAluSx1
CAediting_118298chr1_164601156_+SINEAluAluSx1
CAediting_118299chr1_164601157_+SINEAluAluSx1
CAediting_118300chr1_164601164_+SINEAluAluSx1
CAediting_118301chr1_164601177_+SINEAluAluSx1
CAediting_118302chr1_164601181_+SINEAluAluSx1
CAediting_118303chr1_164601186_+SINEAluAluSx1
CAediting_118304chr1_164601188_+SINEAluAluSx1
CAediting_118305chr1_164601201_+SINEAluAluSx1
CAediting_118306chr1_164601206_+SINEAluAluSx1
CAediting_118307chr1_164601218_+SINEAluAluSx1
CAediting_118308chr1_164601223_+SINEAluAluSx1
CAediting_118309chr1_164601224_+SINEAluAluSx1
CAediting_118310chr1_164603980_+SINEAluAluSx
CAediting_118311chr1_164604155_+SINEAluAluSx
CAediting_118312chr1_164606212_+SINEAluAluSx1
CAediting_118313chr1_164606256_+SINEAluAluSx1
CAediting_118314chr1_164606289_+SINEAluAluSx1
CAediting_118315chr1_164606294_+SINEAluAluSx1
CAediting_118316chr1_164606337_+SINEAluAluSx1
CAediting_118317chr1_164606343_+SINEAluAluSx1
CAediting_118318chr1_164606369_+SINEAluAluSx1
CAediting_118319chr1_164619896_+SINEAluAluJb
CAediting_118320chr1_164619918_+SINEAluAluJb
CAediting_118321chr1_164619919_+SINEAluAluJb
CAediting_118322chr1_164619941_+SINEAluAluJb
CAediting_118323chr1_164620011_+SINEAluAluJb
CAediting_118324chr1_164620028_+SINEAluAluJb
CAediting_118325chr1_164620031_+SINEAluAluJb
CAediting_118326chr1_164620046_+SINEAluAluJb
CAediting_118327chr1_164620059_+SINEAluAluJb
CAediting_118328chr1_164620064_+SINEAluAluJb
CAediting_118329chr1_164620072_+SINEAluAluJb
CAediting_118330chr1_164620108_+SINEAluAluJb
CAediting_118331chr1_164620800_+SINEAluAluSx1
CAediting_118332chr1_164621118_+SINEAluAluSc
CAediting_118333chr1_164621169_+SINEAluAluSc
CAediting_118334chr1_164621239_+SINEAluAluSc
CAediting_118335chr1_164621249_+SINEAluAluSc
CAediting_118336chr1_164622954_+SINEAluAluSg
CAediting_118337chr1_164622998_+SINEAluAluSg
CAediting_118338chr1_164623081_+SINEAluAluSg
CAediting_118339chr1_164650409_+SINEAluAluSx1
CAediting_118340chr1_164652121_+SINEAluAluSc5
CAediting_118341chr1_164652127_+SINEAluAluSc5
CAediting_118342chr1_164652132_+SINEAluAluSc5
CAediting_118343chr1_164652158_+SINEAluAluSc5
CAediting_118344chr1_164652175_+SINEAluAluSc5
CAediting_118345chr1_164652184_+SINEAluAluSc5
CAediting_118346chr1_164652187_+SINEAluAluSc5
CAediting_118347chr1_164652192_+SINEAluAluSc5
CAediting_118348chr1_164652197_+SINEAluAluSc5
CAediting_118349chr1_164652199_+SINEAluAluSc5
CAediting_118350chr1_164652200_+SINEAluAluSc5
CAediting_118351chr1_164652207_+SINEAluAluSc5
CAediting_118352chr1_164652996_+SINEAluAluSz6
CAediting_118353chr1_164653006_+SINEAluAluSz6
CAediting_118354chr1_164653008_+SINEAluAluSz6
CAediting_118355chr1_164653141_+SINEAluAluSz6
CAediting_118356chr1_164653572_+SINEAluAluSx1
CAediting_118357chr1_164653574_+SINEAluAluSx1
CAediting_118358chr1_164653606_+SINEAluAluSx1
CAediting_118359chr1_164653609_+SINEAluAluSx1
CAediting_118360chr1_164653610_+SINEAluAluSx1
CAediting_118361chr1_164653611_+SINEAluAluSx1
CAediting_118362chr1_164653612_+SINEAluAluSx1
CAediting_118363chr1_164653613_+SINEAluAluSx1
CAediting_118364chr1_164653617_+SINEAluAluSx1
CAediting_118365chr1_164653618_+SINEAluAluSx1
CAediting_118366chr1_164653619_+SINEAluAluSx1
CAediting_118367chr1_164653647_+SINEAluAluSx1
CAediting_118368chr1_164653649_+SINEAluAluSx1
CAediting_118369chr1_164653650_+SINEAluAluSx1
CAediting_118370chr1_164653671_+SINEAluAluSx1
CAediting_118371chr1_164653672_+SINEAluAluSx1
CAediting_118372chr1_164653676_+SINEAluAluSx1
CAediting_118373chr1_164653690_+SINEAluAluSx1
CAediting_118374chr1_164653699_+SINEAluAluSx1
CAediting_118375chr1_164653715_+SINEAluAluSx1
CAediting_118376chr1_164653719_+SINEAluAluSx1
CAediting_118377chr1_164653720_+SINEAluAluSx1
CAediting_118378chr1_164655178_+SINEAluAluSp
CAediting_118379chr1_164655347_+SINEAluAluSp
CAediting_118380chr1_164661556_+SINEAluAluSx1
CAediting_118381chr1_164661566_+SINEAluAluSx1
CAediting_118382chr1_164661591_+SINEAluAluSx1
CAediting_118383chr1_164661592_+SINEAluAluSx1
CAediting_118384chr1_164661610_+SINEAluAluSx1
CAediting_118385chr1_164661624_+SINEAluAluSx1
CAediting_118386chr1_164661661_+SINEAluAluSx1
CAediting_118387chr1_164661670_+SINEAluAluSx1
CAediting_118388chr1_164661688_+SINEAluAluSx1
CAediting_118389chr1_164661701_+SINEAluAluSx1
CAediting_118390chr1_164662062_+SINEAluAluSx
CAediting_118391chr1_164662063_+SINEAluAluSx
CAediting_118392chr1_164662070_+SINEAluAluSx
CAediting_118393chr1_164662101_+SINEAluAluSx
CAediting_118394chr1_164662111_+SINEAluAluSx
CAediting_118395chr1_164662116_+SINEAluAluSx
CAediting_118396chr1_164662170_+SINEAluAluSx
CAediting_118397chr1_164662175_+SINEAluAluSx
CAediting_118398chr1_164662179_+SINEAluAluSx
CAediting_118399chr1_164662205_+SINEAluAluSx
CAediting_118400chr1_164662206_+SINEAluAluSx
CAediting_118401chr1_164662215_+SINEAluAluSx
CAediting_118402chr1_164662232_+SINEAluAluSx
CAediting_118403chr1_164662275_+SINEAluAluSx
CAediting_118404chr1_164662276_+SINEAluAluSx
CAediting_118405chr1_164662305_+SINEAluAluSx
CAediting_118406chr1_164681036_+SINEAluAluJr
CAediting_118407chr1_164681049_+SINEAluAluJr
CAediting_118408chr1_164681054_+SINEAluAluJr
CAediting_118409chr1_164681097_+SINEAluAluJr
CAediting_118410chr1_164681098_+SINEAluAluJr
CAediting_118411chr1_164683841_+SINEAluAluJo
CAediting_118412chr1_164683849_+SINEAluAluJo
CAediting_118413chr1_164683855_+SINEAluAluJo
CAediting_118414chr1_164683858_+SINEAluAluJo
CAediting_118415chr1_164683888_+SINEAluAluJo
CAediting_118416chr1_164683932_+SINEAluAluJo
CAediting_118417chr1_164683935_+SINEAluAluJo
CAediting_118418chr1_164683943_+SINEAluAluJo
CAediting_118419chr1_164683947_+SINEAluAluJo
CAediting_118420chr1_164683951_+SINEAluAluJo
CAediting_118421chr1_164683958_+SINEAluAluJo
CAediting_118422chr1_164683959_+SINEAluAluJo
CAediting_118423chr1_164684039_+SINEAluAluJo
CAediting_118424chr1_164684040_+SINEAluAluJo
CAediting_118425chr1_164684046_+SINEAluAluJo
CAediting_118426chr1_164684080_+SINEAluAluJo
CAediting_118427chr1_164684083_+SINEAluAluJo
CAediting_118428chr1_164684092_+SINEAluAluJo
CAediting_118429chr1_164684095_+SINEAluAluJo
CAediting_118430chr1_164686780_+SINEAluAluY
CAediting_118431chr1_164686801_+SINEAluAluY
CAediting_118432chr1_164686804_+SINEAluAluY
CAediting_118433chr1_164686805_+SINEAluAluY
CAediting_118434chr1_164686810_+SINEAluAluY
CAediting_118435chr1_164686889_+SINEAluAluY
CAediting_118436chr1_164686901_+SINEAluAluY
CAediting_118437chr1_164687285_+SINEAluAluJb
CAediting_118438chr1_164687289_+SINEAluAluJb
CAediting_118439chr1_164687300_+SINEAluAluJb
CAediting_118440chr1_164687333_+SINEAluAluJb
CAediting_118441chr1_164687360_+SINEAluAluJb
CAediting_118442chr1_164687385_+SINEAluAluJb
CAediting_118443chr1_164687386_+SINEAluAluJb
CAediting_118444chr1_164687400_+SINEAluAluJb
CAediting_118445chr1_164687402_+SINEAluAluJb
CAediting_118446chr1_164687403_+SINEAluAluJb
CAediting_118447chr1_164687404_+SINEAluAluJb
CAediting_118448chr1_164687406_+SINEAluAluJb
CAediting_118449chr1_164687409_+SINEAluAluJb
CAediting_118450chr1_164687411_+SINEAluAluJb
CAediting_118451chr1_164687412_+SINEAluAluJb
CAediting_118452chr1_164687415_+SINEAluAluJb
CAediting_118453chr1_164687419_+SINEAluAluJb
CAediting_118454chr1_164687439_+SINEAluAluJb
CAediting_118455chr1_164687447_+SINEAluAluJb
CAediting_118456chr1_164687451_+SINEAluAluJb
CAediting_118457chr1_164687505_+SINEAluAluJb
CAediting_118458chr1_164687508_+SINEAluAluJb
CAediting_118459chr1_164687509_+SINEAluAluJb
CAediting_118460chr1_164687516_+SINEAluAluJb
CAediting_118461chr1_164687529_+SINEAluAluJb
CAediting_118462chr1_164690535_+SINEAluFLAM_C
CAediting_118463chr1_164690538_+SINEAluFLAM_C
CAediting_118464chr1_164690557_+SINEAluFLAM_C
CAediting_118465chr1_164690581_+SINEAluFLAM_C
CAediting_118466chr1_164690585_+SINEAluFLAM_C
CAediting_118467chr1_164691132_+SINEAluAluSz6
CAediting_118468chr1_164738355_+SINEAluAluJr4
CAediting_118469chr1_164738386_+SINEAluAluJr4
CAediting_118470chr1_164738419_+SINEAluAluJr4
CAediting_118471chr1_164738427_+SINEAluAluJr4
CAediting_118472chr1_164738489_+SINEAluAluJr4
CAediting_118473chr1_164738540_+SINEAluAluJr4
CAediting_118474chr1_164738541_+SINEAluAluJr4
CAediting_118475chr1_164742287_+SINEAluAluSz6
CAediting_118476chr1_164742427_+SINEAluAluSz6
CAediting_118477chr1_164746682_+SINEAluAluSg
CAediting_118478chr1_164749921_+SINEAluAluJo
CAediting_118479chr1_164749953_+SINEAluAluJo
CAediting_118480chr1_164749989_+SINEAluAluJo
CAediting_118481chr1_164751235_+SINEAluAluSz
CAediting_118482chr1_164751681_+SINEAluAluSx1
CAediting_118483chr1_164751711_+SINEAluAluSx1
CAediting_118484chr1_164751765_+SINEAluAluSx1
CAediting_118485chr1_164768933_+SINEAluAluSz6
CAediting_118486chr1_164768967_+SINEAluAluSz6
CAediting_118487chr1_164768980_+SINEAluAluSz6
CAediting_118488chr1_164769034_+SINEAluAluSz6
CAediting_118489chr1_164778582_+SINEAluAluJb
CAediting_118490chr1_164793906_+SINEAluAluSx
CAediting_118491chr1_164793914_+SINEAluAluSx
CAediting_118492chr1_164793923_+SINEAluAluSx

Top

RNA A-to-I editing events in the alternative splicing sites for PBX1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000185630.17.PBX1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000185630.17.PBX1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PBX1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PBX1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for PBX1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000185630.17ENST00000420696hsa-miR-624-3p1648467011648467077mer-m8164846686164846708146-20.27
CAediting_393chr1_1167164_+ENSG00000185630.17ENST00000420696hsa-miR-200b-3p1648492921648492987mer-m8164849279164849299148-12.48
CAediting_393chr1_1167164_+ENSG00000185630.17ENST00000420696hsa-miR-200b-3p1648493081648493147mer-m8164849294164849315156-16.27
CAediting_688081chr9_63819627_+ENSG00000185630.17ENST00000420696hsa-miR-4477b1648496611648496677mer-m8164849647164849668140-10.83
CAediting_688081chr9_63819627_+ENSG00000185630.17ENST00000420696hsa-miR-4477b1648508821648508887mer-m8164850868164850889146-10.13
CAediting_688081chr9_63819627_+ENSG00000185630.17ENST00000627490hsa-miR-4477b1648496611648496677mer-m8164849647164849668140-10.83
CAediting_980496chr14_31014685_-ENSG00000185630.17ENST00000367897hsa-miR-624-3p1648467011648467077mer-m8164846686164846708146-20.27
CAediting_980496chr14_31014685_-ENSG00000185630.17ENST00000559240hsa-miR-624-3p1648467011648467077mer-m8164846686164846708146-20.27
CAediting_980496chr14_31014685_-ENSG00000185630.17ENST00000560641hsa-miR-624-3p1648467011648467077mer-m8164846686164846708146-20.27
CAediting_980496chr14_31014685_-ENSG00000185630.17ENST00000612123hsa-miR-624-3p1648467011648467077mer-m8164846686164846708146-20.27
CAediting_393chr1_1167164_+ENSG00000185630.17ENST00000612123hsa-miR-200b-3p1648492921648492987mer-m8164849279164849299148-12.48
CAediting_393chr1_1167164_+ENSG00000185630.17ENST00000612123hsa-miR-200b-3p1648493081648493147mer-m8164849294164849315156-16.27
CAediting_688081chr9_63819627_+ENSG00000185630.17ENST00000612123hsa-miR-4477b1648496611648496677mer-m8164849647164849668140-10.83
CAediting_688081chr9_63819627_+ENSG00000185630.17ENST00000612123hsa-miR-4477b1648508821648508887mer-m8164850868164850889146-10.13
CAediting_980496chr14_31014685_-ENSG00000185630.17ENST00000540236hsa-miR-624-3p1648467011648467077mer-m8164846686164846708146-20.27
CAediting_393chr1_1167164_+ENSG00000185630.17ENST00000540236hsa-miR-200b-3p1648492921648492987mer-m8164849279164849299148-12.48
CAediting_393chr1_1167164_+ENSG00000185630.17ENST00000540236hsa-miR-200b-3p1648493081648493147mer-m8164849294164849315156-16.27
CAediting_688081chr9_63819627_+ENSG00000185630.17ENST00000540236hsa-miR-4477b1648496611648496677mer-m8164849647164849668140-10.83
CAediting_688081chr9_63819627_+ENSG00000185630.17ENST00000540236hsa-miR-4477b1648508821648508887mer-m8164850868164850889146-10.13
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648514171648514248mer-1a164851400164851424147-8.25
CAediting_1306323chr19_13836462_-ENSG00000185630.17ENST00000420696hsa-miR-27a-3p1648485541648485607mer-m8164848541164848561149-16.28
CAediting_1351755chr19_40282625_-ENSG00000185630.17ENST00000420696hsa-miR-6411648506821648506887mer-m8164850665164850689146-11.17
CAediting_1399425chr20_1392958_-ENSG00000185630.17ENST00000420696hsa-miR-6869-5p1648490791648490857mer-m8164849065164849086145-19.77
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000420696hsa-miR-6840-3p1648469611648469677mer-m8164846946164846968159-25.69
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000420696hsa-miR-6840-3p1648473651648473717mer-m8164847346164847372142-31.81
CAediting_524911chr7_5495852_-ENSG00000185630.17ENST00000420696hsa-miR-589-3p1648480471648480537mer-m8164848030164848054157-20.97
CAediting_524911chr7_5495852_-ENSG00000185630.17ENST00000420696hsa-miR-589-3p1648516381648516436mer164851622164851649153-17.27
CAediting_524911chr7_5495852_-ENSG00000185630.17ENST00000420696hsa-miR-589-3p1648516421648516487mer-m8164851622164851649153-17.27
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000559240hsa-miR-6840-3p1648469611648469677mer-m8164846946164846968159-25.69
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000559240hsa-miR-6840-3p1648473651648473717mer-m8164847346164847372142-31.81
CAediting_524911chr7_5495852_-ENSG00000185630.17ENST00000559240hsa-miR-589-3p1648480471648480537mer-m8164848030164848054157-20.97
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000560641hsa-miR-6840-3p1648469611648469677mer-m8164846946164846968159-25.69
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000560641hsa-miR-6840-3p1648473651648473717mer-m8164847346164847372142-31.81
CAediting_524911chr7_5495852_-ENSG00000185630.17ENST00000560641hsa-miR-589-3p1648480471648480537mer-m8164848030164848054157-20.97
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648514171648514248mer-1a164851400164851424147-8.25
CAediting_1306323chr19_13836462_-ENSG00000185630.17ENST00000612123hsa-miR-27a-3p1648485541648485607mer-m8164848541164848561149-16.28
CAediting_1351755chr19_40282625_-ENSG00000185630.17ENST00000612123hsa-miR-6411648506821648506887mer-m8164850665164850689146-11.17
CAediting_1399425chr20_1392958_-ENSG00000185630.17ENST00000612123hsa-miR-6869-5p1648490791648490857mer-m8164849065164849086145-19.77
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000612123hsa-miR-6840-3p1648469611648469677mer-m8164846946164846968159-25.69
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000612123hsa-miR-6840-3p1648473651648473717mer-m8164847346164847372142-31.81
CAediting_524911chr7_5495852_-ENSG00000185630.17ENST00000612123hsa-miR-589-3p1648480471648480537mer-m8164848030164848054157-20.97
CAediting_524911chr7_5495852_-ENSG00000185630.17ENST00000612123hsa-miR-589-3p1648516381648516436mer164851622164851649153-17.27
CAediting_524911chr7_5495852_-ENSG00000185630.17ENST00000612123hsa-miR-589-3p1648516421648516487mer-m8164851622164851649153-17.27
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648514171648514248mer-1a164851400164851424147-8.25
CAediting_1306323chr19_13836462_-ENSG00000185630.17ENST00000540236hsa-miR-27a-3p1648485541648485607mer-m8164848541164848561149-16.28
CAediting_1351755chr19_40282625_-ENSG00000185630.17ENST00000540236hsa-miR-6411648506821648506887mer-m8164850665164850689146-11.17
CAediting_1399425chr20_1392958_-ENSG00000185630.17ENST00000540236hsa-miR-6869-5p1648490791648490857mer-m8164849065164849086145-19.77
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000540236hsa-miR-6840-3p1648469611648469677mer-m8164846946164846968159-25.69
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000540236hsa-miR-6840-3p1648473651648473717mer-m8164847346164847372142-31.81
CAediting_524911chr7_5495852_-ENSG00000185630.17ENST00000540236hsa-miR-589-3p1648480471648480537mer-m8164848030164848054157-20.97
CAediting_524911chr7_5495852_-ENSG00000185630.17ENST00000540236hsa-miR-589-3p1648516381648516436mer164851622164851649153-17.27
CAediting_524911chr7_5495852_-ENSG00000185630.17ENST00000540236hsa-miR-589-3p1648516421648516487mer-m8164851622164851649153-17.27

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573000chr7_92204081_-ENSG00000185630.17ENST00000420696hsa-miR-1285-5p1648483581648483647mer-m8164848345164848365140-9.76
CAediting_573001chr7_92204086_-ENSG00000185630.17ENST00000420696hsa-miR-1285-5p1648483581648483647mer-m8164848345164848365140-9.76
CAediting_573000chr7_92204081_-ENSG00000185630.17ENST00000420696hsa-miR-1285-5p1648493981648494047mer-m8164849387164849405146-19.02
CAediting_573001chr7_92204086_-ENSG00000185630.17ENST00000420696hsa-miR-1285-5p1648493981648494047mer-m8164849387164849405146-19.02
CAediting_442554chr5_154685830_+ENSG00000185630.17ENST00000420696hsa-miR-13031648517321648517387mer-m8164851718164851739140-9.25
CAediting_393chr1_1167164_+ENSG00000185630.17ENST00000420696hsa-miR-200b-3p1648499901648499956mer164849976164849996141-17.26
CAediting_1054808chr15_66496985_-ENSG00000185630.17ENST00000420696hsa-miR-45121648486481648486547mer-m8164848634164848655142-16.79
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648485051648485117mer-m8164848490164848512146-8.69
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648485051648485117mer-m8164848490164848512146-8.69
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648485051648485117mer-m8164848490164848512146-8.69
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648485921648485987mer-m8164848575164848599140-6.28
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648485921648485987mer-m8164848575164848599140-6.28
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648510391648510457mer-m8164851022164851046154-9.09
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648510391648510457mer-m8164851022164851046154-9.09
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648510391648510457mer-m8164851022164851046154-9.09
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648515781648515858mer-1a164851560164851585153-13.01
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648515781648515858mer-1a164851560164851585153-13.01
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648515781648515858mer-1a164851560164851585153-13.01
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648516521648516587mer-m8164851629164851659149-10.79
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648516521648516587mer-m8164851629164851659149-10.79
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000420696hsa-miR-548aa1648516521648516587mer-m8164851629164851659149-10.79
CAediting_228905chr2_188297554_+ENSG00000185630.17ENST00000420696hsa-miR-561-3p1648498981648499058mer-1a164849884164849905140-3.61
CAediting_228905chr2_188297554_+ENSG00000185630.17ENST00000420696hsa-miR-561-3p1648514651648514717mer-m8164851451164851472152-6.56
CAediting_980496chr14_31014685_-ENSG00000185630.17ENST00000420696hsa-miR-624-3p1648496281648496358mer-1a164849615164849635140-16.52
CAediting_1351755chr19_40282625_-ENSG00000185630.17ENST00000420696hsa-miR-6411648479411648479477mer-m8164847929164847948146-10.98
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000420696hsa-miR-6840-3p1648494851648494928mer-1a164849471164849492155-22.13
CAediting_468389chr6_31355314_-ENSG00000185630.17ENST00000420696hsa-miR-6891-5p1648507621648507676mer164850750164850768142-16.58
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000367897hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_573000chr7_92204081_-ENSG00000185630.17ENST00000559240hsa-miR-1285-5p1648483581648483647mer-m8164848345164848365140-9.76
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000559240hsa-miR-548aa1648485051648485117mer-m8164848490164848512146-8.69
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000559240hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_573000chr7_92204081_-ENSG00000185630.17ENST00000560641hsa-miR-1285-5p1648483581648483647mer-m8164848345164848365140-9.76
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000560641hsa-miR-548aa1648485051648485117mer-m8164848490164848512146-8.69
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000560641hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_573000chr7_92204081_-ENSG00000185630.17ENST00000612123hsa-miR-1285-5p1648483581648483647mer-m8164848345164848365140-9.76
CAediting_573001chr7_92204086_-ENSG00000185630.17ENST00000612123hsa-miR-1285-5p1648483581648483647mer-m8164848345164848365140-9.76
CAediting_573000chr7_92204081_-ENSG00000185630.17ENST00000612123hsa-miR-1285-5p1648493981648494047mer-m8164849387164849405146-19.02
CAediting_573001chr7_92204086_-ENSG00000185630.17ENST00000612123hsa-miR-1285-5p1648493981648494047mer-m8164849387164849405146-19.02
CAediting_442554chr5_154685830_+ENSG00000185630.17ENST00000612123hsa-miR-13031648517321648517387mer-m8164851718164851739140-9.25
CAediting_393chr1_1167164_+ENSG00000185630.17ENST00000612123hsa-miR-200b-3p1648499901648499956mer164849976164849996141-17.26
CAediting_1054808chr15_66496985_-ENSG00000185630.17ENST00000612123hsa-miR-45121648486481648486547mer-m8164848634164848655142-16.79
CAediting_1054808chr15_66496985_-ENSG00000185630.17ENST00000612123hsa-miR-45121648466391648466457mer-m8164846626164846646153-22.54
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648485051648485117mer-m8164848490164848512146-8.69
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648485051648485117mer-m8164848490164848512146-8.69
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648485051648485117mer-m8164848490164848512146-8.69
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648485921648485987mer-m8164848575164848599140-6.28
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648485921648485987mer-m8164848575164848599140-6.28
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648510391648510457mer-m8164851022164851046154-9.09
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648510391648510457mer-m8164851022164851046154-9.09
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648510391648510457mer-m8164851022164851046154-9.09
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648515781648515858mer-1a164851560164851585153-13.01
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648515781648515858mer-1a164851560164851585153-13.01
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648515781648515858mer-1a164851560164851585153-13.01
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648516521648516587mer-m8164851629164851659149-10.79
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648516521648516587mer-m8164851629164851659149-10.79
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000612123hsa-miR-548aa1648516521648516587mer-m8164851629164851659149-10.79
CAediting_228905chr2_188297554_+ENSG00000185630.17ENST00000612123hsa-miR-561-3p1648498981648499058mer-1a164849884164849905140-3.61
CAediting_228905chr2_188297554_+ENSG00000185630.17ENST00000612123hsa-miR-561-3p1648514651648514717mer-m8164851451164851472152-6.56
CAediting_980496chr14_31014685_-ENSG00000185630.17ENST00000612123hsa-miR-624-3p1648496281648496358mer-1a164849615164849635140-16.52
CAediting_1351755chr19_40282625_-ENSG00000185630.17ENST00000612123hsa-miR-6411648479411648479477mer-m8164847929164847948146-10.98
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000612123hsa-miR-6840-3p1648494851648494928mer-1a164849471164849492155-22.13
CAediting_468389chr6_31355314_-ENSG00000185630.17ENST00000612123hsa-miR-6891-5p1648507621648507676mer164850750164850768142-16.58
CAediting_573000chr7_92204081_-ENSG00000185630.17ENST00000540236hsa-miR-1285-5p1648483581648483647mer-m8164848345164848365140-9.76
CAediting_573001chr7_92204086_-ENSG00000185630.17ENST00000540236hsa-miR-1285-5p1648483581648483647mer-m8164848345164848365140-9.76
CAediting_573000chr7_92204081_-ENSG00000185630.17ENST00000540236hsa-miR-1285-5p1648493981648494047mer-m8164849387164849405146-19.02
CAediting_573001chr7_92204086_-ENSG00000185630.17ENST00000540236hsa-miR-1285-5p1648493981648494047mer-m8164849387164849405146-19.02
CAediting_442554chr5_154685830_+ENSG00000185630.17ENST00000540236hsa-miR-13031648517321648517387mer-m8164851718164851739140-9.25
CAediting_393chr1_1167164_+ENSG00000185630.17ENST00000540236hsa-miR-200b-3p1648499901648499956mer164849976164849996141-17.26
CAediting_1054808chr15_66496985_-ENSG00000185630.17ENST00000540236hsa-miR-45121648486481648486547mer-m8164848634164848655142-16.79
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648485051648485117mer-m8164848490164848512146-8.69
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648485051648485117mer-m8164848490164848512146-8.69
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648485051648485117mer-m8164848490164848512146-8.69
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648485921648485987mer-m8164848575164848599140-6.28
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648485921648485987mer-m8164848575164848599140-6.28
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648469181648469247mer-m8164846901164846925150-8.61
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648510391648510457mer-m8164851022164851046154-9.09
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648510391648510457mer-m8164851022164851046154-9.09
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648510391648510457mer-m8164851022164851046154-9.09
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648515781648515858mer-1a164851560164851585153-13.01
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648515781648515858mer-1a164851560164851585153-13.01
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648515781648515858mer-1a164851560164851585153-13.01
CAediting_1229413chr17_67471544_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648516521648516587mer-m8164851629164851659149-10.79
CAediting_1229415chr17_67471547_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648516521648516587mer-m8164851629164851659149-10.79
CAediting_1229414chr17_67471546_+ENSG00000185630.17ENST00000540236hsa-miR-548aa1648516521648516587mer-m8164851629164851659149-10.79
CAediting_228905chr2_188297554_+ENSG00000185630.17ENST00000540236hsa-miR-561-3p1648498981648499058mer-1a164849884164849905140-3.61
CAediting_228905chr2_188297554_+ENSG00000185630.17ENST00000540236hsa-miR-561-3p1648514651648514717mer-m8164851451164851472152-6.56
CAediting_980496chr14_31014685_-ENSG00000185630.17ENST00000540236hsa-miR-624-3p1648496281648496358mer-1a164849615164849635140-16.52
CAediting_1351755chr19_40282625_-ENSG00000185630.17ENST00000540236hsa-miR-6411648479411648479477mer-m8164847929164847948146-10.98
CAediting_580943chr7_100356700_+ENSG00000185630.17ENST00000540236hsa-miR-6840-3p1648494851648494928mer-1a164849471164849492155-22.13
CAediting_468389chr6_31355314_-ENSG00000185630.17ENST00000540236hsa-miR-6891-5p1648507621648507676mer164850750164850768142-16.58

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PBX1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000498497.2retained_intronSoverviewSoverview
ENST00000558796.2processed_transcriptSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_118411ENST00000498497.2chr1_164683841_+-865.40-865.50-890.50
CAediting_118412ENST00000498497.2chr1_164683849_+-865.90-865.50-890.50
CAediting_118413ENST00000498497.2chr1_164683855_+-871.70-865.50-890.50
CAediting_118414ENST00000498497.2chr1_164683858_+-867.20-865.50-890.50
CAediting_118415ENST00000498497.2chr1_164683888_+-865.50-865.50-890.50
CAediting_118416ENST00000498497.2chr1_164683932_+-870.60-865.50-890.50
CAediting_118417ENST00000498497.2chr1_164683935_+-868.70-865.50-890.50
CAediting_118418ENST00000498497.2chr1_164683943_+-869.20-865.50-890.50
CAediting_118419ENST00000498497.2chr1_164683947_+-867.40-865.50-890.50
CAediting_118420ENST00000498497.2chr1_164683951_+-866.20-865.50-890.50
CAediting_118421ENST00000498497.2chr1_164683958_+-866.30-865.50-890.50
CAediting_118422ENST00000498497.2chr1_164683959_+-867.00-865.50-890.50
CAediting_118423ENST00000498497.2chr1_164684039_+-865.50-865.50-890.50
CAediting_118424ENST00000498497.2chr1_164684040_+-866.30-865.50-890.50
CAediting_118425ENST00000498497.2chr1_164684046_+-865.50-865.50-890.50
CAediting_118426ENST00000498497.2chr1_164684080_+-867.40-865.50-890.50
CAediting_118427ENST00000498497.2chr1_164684083_+-865.70-865.50-890.50
CAediting_118428ENST00000498497.2chr1_164684092_+-867.10-865.50-890.50
CAediting_118429ENST00000498497.2chr1_164684095_+-868.30-865.50-890.50
CAediting_118340ENST00000558796.2chr1_164652121_+-130.19-130.89-133.39
CAediting_118341ENST00000558796.2chr1_164652127_+-134.49-130.89-133.39
CAediting_118342ENST00000558796.2chr1_164652132_+-130.49-130.89-133.39

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Relation with ADAR for PBX1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
OVCAediting_118301chr1_164601177_+0.002684301318582510.171310907232592....

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Relation with cancer stages for PBX1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for PBX1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
OVCAediting_118279chr1_164601048_+0.00648824209376420.04653890.0673895
OVCAediting_118287chr1_164601080_+0.0278331852461690.005085080.0296421

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RelatedDrugs for PBX1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PBX1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
PBX1C0006413Burkitt Lymphoma2CTD_human;ORPHANET
PBX1C0343640African Burkitt's lymphoma2CTD_human
PBX1C1968949Cakut2GENOMICS_ENGLAND
PBX1C4721444Burkitt Leukemia2CTD_human
PBX1C0013146Drug abuse1CTD_human
PBX1C0013170Drug habituation1CTD_human
PBX1C0013222Drug Use Disorders1CTD_human
PBX1C0029231Organic Mental Disorders, Substance-Induced1CTD_human
PBX1C0038580Substance Dependence1CTD_human
PBX1C0038586Substance Use Disorders1CTD_human
PBX1C0236969Substance-Related Disorders1CTD_human
PBX1C0431692Bilateral renal hypoplasia1ORPHANET
PBX1C0740858Substance abuse problem1CTD_human
PBX1C1510472Drug Dependence1CTD_human
PBX1C4316881Prescription Drug Abuse1CTD_human
PBX1C4539968CONGENITAL ANOMALIES OF KIDNEY AND URINARY TRACT SYNDROME WITH OR WITHOUT HEARING LOSS, ABNORMAL EARS, OR DEVELOPMENTAL DELAY1GENOMICS_ENGLAND