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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: PAFAH1B2 (CAeditome ID:5049)

Gene summary for PAFAH1B2

check button Gene summary
Gene informationGene symbol

PAFAH1B2

Gene ID

5049

Gene nameplatelet activating factor acetylhydrolase 1b catalytic subunit 2
SynonymsHEL-S-303
Cytomap

11q23.3

Type of geneprotein-coding
Descriptionplatelet-activating factor acetylhydrolase IB subunit alpha2PAF acetylhydrolase 30 kDa subunitPAF-AH 30 kDa subunitPAF-AH subunit betaPAF-AH1b alpha 2 subunitPAFAH subunit betaepididymis secretory protein Li 303epididymis secretory sperm binding pr
Modification date20210518
UniProtAcc

P68402

Context- 29758199(PAFAH1B2 is a HIF1a target gene and promotes metastasis in pancreatic cancer)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
PAFAH1B2

GO:0001650

Platelet-activating factor acetylhydrolase IB subunit alpha2

0000052

PAFAH1B2

GO:0005730

Platelet-activating factor acetylhydrolase IB subunit alpha2

0000052

PAFAH1B2

GO:0005829

Platelet-activating factor acetylhydrolase IB subunit alpha2

0000052

PAFAH1B2

GO:0005886

Platelet-activating factor acetylhydrolase IB subunit alpha2

0000052


Top

RNA A-to-I events for PAFAH1B2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000168092.12

check button RNA A-to-I editing events in Cancer.
CAediting_853515(117146199, +), CAediting_853516(117146539, +), CAediting_853517(117146546, +), CAediting_853518(117146627, +), CAediting_853519(117146745, +), CAediting_853520(117146751, +), CAediting_853521(117146767, +), CAediting_853522(117146768, +), CAediting_853523(117146772, +), CAediting_853524(117146781, +), CAediting_853525(117146799, +), CAediting_853526(117146800, +), CAediting_853527(117146901, +), CAediting_853528(117147013, +), CAediting_853529(117147022, +), CAediting_853530(117147059, +), CAediting_853531(117147107, +), CAediting_853532(117147381, +), CAediting_853533(117147398, +), CAediting_853534(117147418, +), CAediting_853535(117147450, +), CAediting_853536(117148667, +), CAediting_853537(117148685, +), CAediting_853538(117148894, +), CAediting_853539(117148926, +), CAediting_853540(117148985, +), CAediting_853541(117148994, +), CAediting_853542(117149894, +), CAediting_853543(117149941, +), CAediting_853544(117149945, +), CAediting_853545(117149946, +), CAediting_853546(117150779, +), CAediting_853547(117150781, +), CAediting_853548(117150800, +), CAediting_853549(117150835, +), CAediting_853550(117150841, +), CAediting_853551(117150867, +), CAediting_853552(117151762, +), CAediting_853553(117152603, +), CAediting_853554(117152818, +), CAediting_853555(117152895, +), CAediting_853556(117152935, +), CAediting_853557(117153011, +), CAediting_853558(117153508, +), CAediting_853559(117153652, +), CAediting_853560(117153989, +), CAediting_853561(117154011, +), CAediting_853562(117154016, +), CAediting_853563(117154053, +), CAediting_853564(117154066, +), CAediting_853565(117154096, +), CAediting_853566(117154109, +), CAediting_853567(117154216, +), CAediting_853568(117154232, +), CAediting_853569(117154441, +), CAediting_853570(117154520, +), CAediting_853571(117154566, +), CAediting_853572(117154578, +), CAediting_853573(117154630, +), CAediting_853574(117155092, +), CAediting_853575(117155094, +), CAediting_853576(117155098, +), CAediting_853577(117155145, +), CAediting_853578(117155165, +), CAediting_853579(117155207, +), CAediting_853580(117155215, +), CAediting_853581(117155966, +), CAediting_853582(117156029, +), CAediting_853583(117156089, +), CAediting_853584(117156090, +), CAediting_853585(117156819, +), CAediting_853586(117156833, +), CAediting_853587(117157329, +), CAediting_853588(117157434, +), CAediting_853589(117157693, +), CAediting_853590(117157694, +), CAediting_853591(117157869, +), CAediting_853592(117158251, +), CAediting_853593(117158277, +), CAediting_853594(117158290, +), CAediting_853595(117158304, +), CAediting_853596(117158312, +), CAediting_853597(117158706, +), CAediting_853598(117158907, +), CAediting_853599(117159456, +), CAediting_853600(117159471, +), CAediting_853601(117159477, +), CAediting_853602(117159478, +), CAediting_853603(117159500, +), CAediting_853604(117159518, +), CAediting_853605(117159523, +), CAediting_853606(117159531, +), CAediting_853607(117159578, +), CAediting_853608(117159604, +), CAediting_853609(117159607, +), CAediting_853610(117159612, +), CAediting_853611(117159614, +), CAediting_853612(117159615, +), CAediting_853613(117159628, +), CAediting_853614(117159645, +), CAediting_853615(117159655, +), CAediting_853616(117159667, +), CAediting_853617(117159670, +), CAediting_853618(117159684, +), CAediting_853619(117159685, +), CAediting_853620(117159690, +), CAediting_853621(117159717, +), CAediting_853622(117159755, +), CAediting_853623(117159776, +), CAediting_853624(117159796, +), CAediting_853625(117159800, +), CAediting_853626(117159811, +), CAediting_853627(117159812, +), CAediting_853628(117159825, +), CAediting_853629(117159826, +), CAediting_853630(117159852, +), CAediting_853631(117159853, +), CAediting_853632(117159854, +), CAediting_853633(117159868, +), CAediting_853634(117159871, +), CAediting_853635(117162154, +), CAediting_853636(117162159, +), CAediting_853637(117162185, +), CAediting_853638(117162651, +), CAediting_853639(117163588, +), CAediting_853640(117163593, +), CAediting_853641(117165964, +), CAediting_853642(117165965, +), CAediting_853643(117165968, +), CAediting_853644(117166021, +), CAediting_853645(117166024, +), CAediting_853646(117166041, +), CAediting_853647(117166043, +), CAediting_853648(117166050, +), CAediting_853649(117166104, +), CAediting_853650(117166105, +), CAediting_853651(117166117, +), CAediting_853652(117168812, +), CAediting_853653(117168834, +), CAediting_853654(117168855, +), CAediting_853655(117168865, +), CAediting_853656(117168870, +), CAediting_853657(117168891, +), CAediting_853658(117168930, +), CAediting_853659(117168943, +), CAediting_853660(117168956, +), CAediting_853661(117168965, +), CAediting_853662(117169053, +), CAediting_853663(117171416, +), CAediting_853664(117171425, +), CAediting_853665(117171448, +), CAediting_853666(117171475, +), CAediting_853667(117172783, +),

Top

RNA editing positional annotations for PAFAH1B2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_853515chr11_117146199_+ncRNA_intronic
CAediting_853516chr11_117146539_+ncRNA_intronic
CAediting_853517chr11_117146546_+ncRNA_intronic
CAediting_853518chr11_117146627_+ncRNA_intronic
CAediting_853519chr11_117146745_+ncRNA_intronic
CAediting_853520chr11_117146751_+ncRNA_intronic
CAediting_853521chr11_117146767_+ncRNA_intronic
CAediting_853522chr11_117146768_+ncRNA_intronic
CAediting_853523chr11_117146772_+ncRNA_intronic
CAediting_853524chr11_117146781_+ncRNA_intronic
CAediting_853525chr11_117146799_+ncRNA_intronic
CAediting_853526chr11_117146800_+ncRNA_intronic
CAediting_853527chr11_117146901_+ncRNA_intronic
CAediting_853528chr11_117147013_+ncRNA_intronic
CAediting_853529chr11_117147022_+ncRNA_intronic
CAediting_853530chr11_117147059_+ncRNA_intronic
CAediting_853531chr11_117147107_+ncRNA_intronic
CAediting_853532chr11_117147381_+ncRNA_intronic
CAediting_853533chr11_117147398_+ncRNA_intronic
CAediting_853534chr11_117147418_+ncRNA_intronic
CAediting_853535chr11_117147450_+ncRNA_intronic
CAediting_853536chr11_117148667_+ncRNA_intronic
CAediting_853537chr11_117148685_+ncRNA_intronic
CAediting_853538chr11_117148894_+ncRNA_intronic
CAediting_853539chr11_117148926_+ncRNA_intronic
CAediting_853540chr11_117148985_+ncRNA_intronic
CAediting_853541chr11_117148994_+ncRNA_intronic
CAediting_853542chr11_117149894_+ncRNA_intronic
CAediting_853543chr11_117149941_+ncRNA_intronic
CAediting_853544chr11_117149945_+ncRNA_intronic
CAediting_853545chr11_117149946_+ncRNA_intronic
CAediting_853546chr11_117150779_+ncRNA_intronic
CAediting_853547chr11_117150781_+ncRNA_intronic
CAediting_853548chr11_117150800_+ncRNA_intronic
CAediting_853549chr11_117150835_+ncRNA_intronic
CAediting_853550chr11_117150841_+ncRNA_intronic
CAediting_853551chr11_117150867_+ncRNA_intronic
CAediting_853552chr11_117151762_+ncRNA_intronic
CAediting_853553chr11_117152603_+ncRNA_intronic
CAediting_853554chr11_117152818_+ncRNA_intronic
CAediting_853555chr11_117152895_+ncRNA_intronic
CAediting_853556chr11_117152935_+ncRNA_intronic
CAediting_853557chr11_117153011_+ncRNA_intronic
CAediting_853558chr11_117153508_+ncRNA_intronic
CAediting_853559chr11_117153652_+ncRNA_intronic
CAediting_853560chr11_117153989_+ncRNA_intronic
CAediting_853561chr11_117154011_+ncRNA_intronic
CAediting_853562chr11_117154016_+ncRNA_intronic
CAediting_853563chr11_117154053_+ncRNA_intronic
CAediting_853564chr11_117154066_+ncRNA_intronic
CAediting_853565chr11_117154096_+ncRNA_intronic
CAediting_853566chr11_117154109_+ncRNA_intronic
CAediting_853567chr11_117154216_+ncRNA_intronic
CAediting_853568chr11_117154232_+ncRNA_intronic
CAediting_853569chr11_117154441_+ncRNA_intronic
CAediting_853570chr11_117154520_+ncRNA_intronic
CAediting_853571chr11_117154566_+ncRNA_intronic
CAediting_853572chr11_117154578_+ncRNA_intronic
CAediting_853573chr11_117154630_+ncRNA_intronic
CAediting_853574chr11_117155092_+ncRNA_intronic
CAediting_853575chr11_117155094_+ncRNA_intronic
CAediting_853576chr11_117155098_+ncRNA_intronic
CAediting_853577chr11_117155145_+ncRNA_intronic
CAediting_853578chr11_117155165_+ncRNA_intronic
CAediting_853579chr11_117155207_+ncRNA_intronic
CAediting_853580chr11_117155215_+ncRNA_intronic
CAediting_853581chr11_117155966_+ncRNA_intronic
CAediting_853582chr11_117156029_+ncRNA_intronic
CAediting_853583chr11_117156089_+ncRNA_intronic
CAediting_853584chr11_117156090_+ncRNA_intronic
CAediting_853585chr11_117156819_+ncRNA_intronic
CAediting_853586chr11_117156833_+ncRNA_intronic
CAediting_853587chr11_117157329_+ncRNA_intronic
CAediting_853588chr11_117157434_+ncRNA_intronic
CAediting_853589chr11_117157693_+ncRNA_intronic
CAediting_853590chr11_117157694_+ncRNA_intronic
CAediting_853591chr11_117157869_+ncRNA_intronic
CAediting_853592chr11_117158251_+ncRNA_intronic
CAediting_853593chr11_117158277_+ncRNA_intronic
CAediting_853594chr11_117158290_+ncRNA_intronic
CAediting_853595chr11_117158304_+ncRNA_intronic
CAediting_853596chr11_117158312_+ncRNA_intronic
CAediting_853597chr11_117158706_+ncRNA_intronic
CAediting_853598chr11_117158907_+ncRNA_intronic
CAediting_853599chr11_117159456_+ncRNA_exonic
CAediting_853600chr11_117159471_+ncRNA_exonic
CAediting_853601chr11_117159477_+ncRNA_exonic
CAediting_853602chr11_117159478_+ncRNA_exonic
CAediting_853603chr11_117159500_+ncRNA_exonic
CAediting_853604chr11_117159518_+ncRNA_exonic
CAediting_853605chr11_117159523_+ncRNA_exonic
CAediting_853606chr11_117159531_+ncRNA_exonic
CAediting_853607chr11_117159578_+ncRNA_exonic
CAediting_853608chr11_117159604_+ncRNA_exonic
CAediting_853609chr11_117159607_+ncRNA_exonic
CAediting_853610chr11_117159612_+ncRNA_exonic
CAediting_853611chr11_117159614_+ncRNA_exonic
CAediting_853612chr11_117159615_+ncRNA_exonic
CAediting_853613chr11_117159628_+ncRNA_exonic
CAediting_853614chr11_117159645_+ncRNA_exonic
CAediting_853615chr11_117159655_+ncRNA_exonic
CAediting_853616chr11_117159667_+ncRNA_exonic
CAediting_853617chr11_117159670_+ncRNA_exonic
CAediting_853618chr11_117159684_+ncRNA_exonic
CAediting_853619chr11_117159685_+ncRNA_exonic
CAediting_853620chr11_117159690_+ncRNA_exonic
CAediting_853621chr11_117159717_+ncRNA_exonic
CAediting_853622chr11_117159755_+ncRNA_exonic
CAediting_853623chr11_117159776_+ncRNA_exonic
CAediting_853624chr11_117159796_+ncRNA_exonic
CAediting_853625chr11_117159800_+ncRNA_exonic
CAediting_853626chr11_117159811_+ncRNA_exonic
CAediting_853627chr11_117159812_+ncRNA_exonic
CAediting_853628chr11_117159825_+ncRNA_exonic
CAediting_853629chr11_117159826_+ncRNA_exonic
CAediting_853630chr11_117159852_+ncRNA_exonic
CAediting_853631chr11_117159853_+ncRNA_exonic
CAediting_853632chr11_117159854_+ncRNA_exonic
CAediting_853633chr11_117159868_+ncRNA_exonic
CAediting_853634chr11_117159871_+ncRNA_exonic
CAediting_853635chr11_117162154_+ncRNA_intronic
CAediting_853636chr11_117162159_+ncRNA_intronic
CAediting_853637chr11_117162185_+ncRNA_intronic
CAediting_853638chr11_117162651_+ncRNA_intronic
CAediting_853639chr11_117163588_+ncRNA_intronic
CAediting_853640chr11_117163593_+ncRNA_intronic
CAediting_853641chr11_117165964_+ncRNA_intronic
CAediting_853642chr11_117165965_+ncRNA_intronic
CAediting_853643chr11_117165968_+ncRNA_intronic
CAediting_853644chr11_117166021_+ncRNA_intronic
CAediting_853645chr11_117166024_+ncRNA_intronic
CAediting_853646chr11_117166041_+ncRNA_intronic
CAediting_853647chr11_117166043_+ncRNA_intronic
CAediting_853648chr11_117166050_+ncRNA_intronic
CAediting_853649chr11_117166104_+ncRNA_intronic
CAediting_853650chr11_117166105_+ncRNA_intronic
CAediting_853651chr11_117166117_+ncRNA_intronic
CAediting_853652chr11_117168812_+ncRNA_intronic
CAediting_853653chr11_117168834_+ncRNA_intronic
CAediting_853654chr11_117168855_+ncRNA_intronic
CAediting_853655chr11_117168865_+ncRNA_intronic
CAediting_853656chr11_117168870_+ncRNA_intronic
CAediting_853657chr11_117168891_+ncRNA_intronic
CAediting_853658chr11_117168930_+ncRNA_intronic
CAediting_853659chr11_117168943_+ncRNA_intronic
CAediting_853660chr11_117168956_+ncRNA_intronic
CAediting_853661chr11_117168965_+ncRNA_intronic
CAediting_853662chr11_117169053_+ncRNA_intronic
CAediting_853663chr11_117171416_+ncRNA_intronic
CAediting_853664chr11_117171425_+ncRNA_intronic
CAediting_853665chr11_117171448_+ncRNA_intronic
CAediting_853666chr11_117171475_+ncRNA_intronic
CAediting_853667chr11_117172783_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_853515chr11_117146199_+SINEAluAluSz
CAediting_853516chr11_117146539_+SINEAluAluJr
CAediting_853517chr11_117146546_+SINEAluAluJr
CAediting_853518chr11_117146627_+SINEAluAluJr
CAediting_853519chr11_117146745_+SINEAluAluJb
CAediting_853520chr11_117146751_+SINEAluAluJb
CAediting_853521chr11_117146767_+SINEAluAluJb
CAediting_853522chr11_117146768_+SINEAluAluJb
CAediting_853523chr11_117146772_+SINEAluAluJb
CAediting_853524chr11_117146781_+SINEAluAluJb
CAediting_853525chr11_117146799_+SINEAluAluJb
CAediting_853526chr11_117146800_+SINEAluAluJb
CAediting_853527chr11_117146901_+SINEAluAluJb
CAediting_853528chr11_117147013_+SINEAluAluSq2
CAediting_853529chr11_117147022_+SINEAluAluSq2
CAediting_853530chr11_117147059_+SINEAluAluSq2
CAediting_853531chr11_117147107_+SINEAluAluSq2
CAediting_853532chr11_117147381_+SINEAluAluJb
CAediting_853533chr11_117147398_+SINEAluAluJb
CAediting_853534chr11_117147418_+SINEAluAluJb
CAediting_853535chr11_117147450_+SINEAluAluJb
CAediting_853536chr11_117148667_+SINEAluFLAM_A
CAediting_853537chr11_117148685_+SINEAluFLAM_A
CAediting_853538chr11_117148894_+SINEAluAluSx
CAediting_853539chr11_117148926_+SINEAluAluSx
CAediting_853540chr11_117148985_+SINEAluAluSx
CAediting_853541chr11_117148994_+SINEAluAluSx
CAediting_853542chr11_117149894_+SINEAluAluJb
CAediting_853543chr11_117149941_+SINEAluAluJb
CAediting_853544chr11_117149945_+SINEAluAluJb
CAediting_853545chr11_117149946_+SINEAluAluJb
CAediting_853546chr11_117150779_+SINEAluAluY
CAediting_853547chr11_117150781_+SINEAluAluY
CAediting_853548chr11_117150800_+SINEAluAluY
CAediting_853549chr11_117150835_+SINEAluAluY
CAediting_853550chr11_117150841_+SINEAluAluY
CAediting_853551chr11_117150867_+SINEAluAluY
CAediting_853552chr11_117151762_+SINEAluAluYf1
CAediting_853553chr11_117152603_+SINEAluFLAM_A
CAediting_853554chr11_117152818_+SINEAluAluSx3
CAediting_853555chr11_117152895_+SINEAluAluSx3
CAediting_853556chr11_117152935_+SINEAluAluSx3
CAediting_853557chr11_117153011_+SINEAluAluSx3
CAediting_853558chr11_117153508_+SINEAluAluSz6
CAediting_853559chr11_117153652_+SINEAluAluSz6
CAediting_853560chr11_117153989_+SINEAluAluJr
CAediting_853561chr11_117154011_+SINEAluAluJr
CAediting_853562chr11_117154016_+SINEAluAluJr
CAediting_853563chr11_117154053_+SINEAluAluJr
CAediting_853564chr11_117154066_+SINEAluAluJr
CAediting_853565chr11_117154096_+SINEAluAluJr
CAediting_853566chr11_117154109_+SINEAluAluJr
CAediting_853567chr11_117154216_+SINEAluAluJo
CAediting_853568chr11_117154232_+SINEAluAluJo
CAediting_853569chr11_117154441_+SINEAluAluJb
CAediting_853570chr11_117154520_+SINEAluAluJb
CAediting_853571chr11_117154566_+SINEAluAluJb
CAediting_853572chr11_117154578_+SINEAluAluJb
CAediting_853573chr11_117154630_+SINEAluAluJb
CAediting_853574chr11_117155092_+SINEAluAluSx1
CAediting_853575chr11_117155094_+SINEAluAluSx1
CAediting_853576chr11_117155098_+SINEAluAluSx1
CAediting_853577chr11_117155145_+SINEAluAluSx1
CAediting_853578chr11_117155165_+SINEAluAluSx1
CAediting_853579chr11_117155207_+SINEAluAluSx1
CAediting_853580chr11_117155215_+SINEAluAluSx1
CAediting_853581chr11_117155966_+SINEAluAluJr
CAediting_853582chr11_117156029_+SINEAluAluJr
CAediting_853583chr11_117156089_+SINEAluAluJr
CAediting_853584chr11_117156090_+SINEAluAluJr
CAediting_853585chr11_117156819_+SINEAluAluJb
CAediting_853586chr11_117156833_+SINEAluAluJb
CAediting_853587chr11_117157329_+SINEAluAluSz6
CAediting_853588chr11_117157434_+SINEAluAluSz6
CAediting_853589chr11_117157693_+SINEAluFLAM_A
CAediting_853590chr11_117157694_+SINEAluFLAM_A
CAediting_853591chr11_117157869_+SINEAluAluSx1
CAediting_853592chr11_117158251_+SINEAluFLAM_C
CAediting_853593chr11_117158277_+SINEAluFLAM_C
CAediting_853594chr11_117158290_+SINEAluFLAM_C
CAediting_853595chr11_117158304_+SINEAluFLAM_C
CAediting_853596chr11_117158312_+SINEAluFLAM_C
CAediting_853597chr11_117158706_+SINEAluAluSq2
CAediting_853598chr11_117158907_+SINEAluAluSq2
CAediting_853600chr11_117159471_+SINEAluAluJb
CAediting_853601chr11_117159477_+SINEAluAluJb
CAediting_853602chr11_117159478_+SINEAluAluJb
CAediting_853603chr11_117159500_+SINEAluAluJb
CAediting_853604chr11_117159518_+SINEAluAluJb
CAediting_853605chr11_117159523_+SINEAluAluJb
CAediting_853606chr11_117159531_+SINEAluAluJb
CAediting_853607chr11_117159578_+SINEAluAluJb
CAediting_853608chr11_117159604_+SINEAluAluJb
CAediting_853609chr11_117159607_+SINEAluAluJb
CAediting_853610chr11_117159612_+SINEAluAluJb
CAediting_853611chr11_117159614_+SINEAluAluJb
CAediting_853612chr11_117159615_+SINEAluAluJb
CAediting_853613chr11_117159628_+SINEAluAluJb
CAediting_853614chr11_117159645_+SINEAluAluJb
CAediting_853615chr11_117159655_+SINEAluAluJb
CAediting_853616chr11_117159667_+SINEAluAluJb
CAediting_853617chr11_117159670_+SINEAluAluJb
CAediting_853618chr11_117159684_+SINEAluAluJb
CAediting_853619chr11_117159685_+SINEAluAluJb
CAediting_853620chr11_117159690_+SINEAluAluJb
CAediting_853621chr11_117159717_+SINEAluAluJb
CAediting_853622chr11_117159755_+SINEAluAluJb
CAediting_853623chr11_117159776_+SINEAluAluJr
CAediting_853624chr11_117159796_+SINEAluAluJr
CAediting_853625chr11_117159800_+SINEAluAluJr
CAediting_853626chr11_117159811_+SINEAluAluJr
CAediting_853627chr11_117159812_+SINEAluAluJr
CAediting_853628chr11_117159825_+SINEAluAluJr
CAediting_853629chr11_117159826_+SINEAluAluJr
CAediting_853630chr11_117159852_+SINEAluAluJr
CAediting_853631chr11_117159853_+SINEAluAluJr
CAediting_853632chr11_117159854_+SINEAluAluJr
CAediting_853633chr11_117159868_+SINEAluAluJr
CAediting_853634chr11_117159871_+SINEAluAluJr
CAediting_853635chr11_117162154_+SINEAluAluJr4
CAediting_853636chr11_117162159_+SINEAluAluJr4
CAediting_853637chr11_117162185_+SINEAluAluJr4
CAediting_853638chr11_117162651_+SINEAluAluSz
CAediting_853639chr11_117163588_+SINEAluAluSx
CAediting_853640chr11_117163593_+SINEAluAluSx
CAediting_853641chr11_117165964_+SINEAluAluSx4
CAediting_853642chr11_117165965_+SINEAluAluSx4
CAediting_853643chr11_117165968_+SINEAluAluSx4
CAediting_853644chr11_117166021_+SINEAluAluSx4
CAediting_853645chr11_117166024_+SINEAluAluSx4
CAediting_853646chr11_117166041_+SINEAluAluSx4
CAediting_853647chr11_117166043_+SINEAluAluSx4
CAediting_853648chr11_117166050_+SINEAluAluSx4
CAediting_853649chr11_117166104_+SINEAluAluSx4
CAediting_853650chr11_117166105_+SINEAluAluSx4
CAediting_853651chr11_117166117_+SINEAluAluSx4
CAediting_853652chr11_117168812_+SINEAluAluSq2
CAediting_853653chr11_117168834_+SINEAluAluSq2
CAediting_853654chr11_117168855_+SINEAluAluSq2
CAediting_853655chr11_117168865_+SINEAluAluSq2
CAediting_853656chr11_117168870_+SINEAluAluSq2
CAediting_853657chr11_117168891_+SINEAluAluSq2
CAediting_853658chr11_117168930_+SINEAluAluSq2
CAediting_853659chr11_117168943_+SINEAluAluSq2
CAediting_853660chr11_117168956_+SINEAluAluSq2
CAediting_853661chr11_117168965_+SINEAluAluSq2
CAediting_853662chr11_117169053_+SINEAluAluSq2
CAediting_853663chr11_117171416_+SINEAluAluSx
CAediting_853664chr11_117171425_+SINEAluAluSx
CAediting_853665chr11_117171448_+SINEAluAluSx
CAediting_853666chr11_117171475_+SINEAluAluSx
CAediting_853667chr11_117172783_+SINEAluAluSz6

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RNA A-to-I editing events in the alternative splicing sites for PAFAH1B2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000168092.12.PAFAH1B2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000168092.12.PAFAH1B2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PAFAH1B2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PAFAH1B2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for PAFAH1B2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000168092.12ENST00000419197hsa-miR-605-3p1171754471171754537mer-m8117175430117175454153-15.62
CAediting_688080chr9_63819626_+ENSG00000168092.12ENST00000419197hsa-miR-4477b1171762671171762737mer-m8117176253117176274140-10.95
CAediting_688080chr9_63819626_+ENSG00000168092.12ENST00000529887hsa-miR-4477b1171762671171762737mer-m8117176253117176274140-10.95
CAediting_1054808chr15_66496985_-ENSG00000168092.12ENST00000419197hsa-miR-45121171752431171752497mer-m8117175225117175250151-26.91
CAediting_1229414chr17_67471546_+ENSG00000168092.12ENST00000419197hsa-miR-548aa1171762581171762647mer-m8117176242117176265161-20.99
CAediting_1229415chr17_67471547_+ENSG00000168092.12ENST00000419197hsa-miR-548aa1171765251171765328mer-1a117176502117176532150-14.9
CAediting_1229415chr17_67471547_+ENSG00000168092.12ENST00000419197hsa-miR-548aa1171752771171752837mer-m8117175262117175284152-13.65
CAediting_396018chr5_1062918_-ENSG00000168092.12ENST00000419197hsa-miR-46351171762681171762747mer-m8117176254117176275153-15.9
CAediting_442554chr5_154685830_+ENSG00000168092.12ENST00000419197hsa-miR-13031171759791171759868mer-1a117175965117175986146-13.44
CAediting_604450chr7_133034877_-ENSG00000168092.12ENST00000419197hsa-miR-36541171750241171750318mer-1a117175014117175031146-19.98
CAediting_1229414chr17_67471546_+ENSG00000168092.12ENST00000529887hsa-miR-548aa1171762581171762647mer-m8117176242117176265161-20.99
CAediting_396018chr5_1062918_-ENSG00000168092.12ENST00000529887hsa-miR-46351171762681171762747mer-m8117176254117176275153-15.9
CAediting_442554chr5_154685830_+ENSG00000168092.12ENST00000529887hsa-miR-13031171759791171759868mer-1a117175965117175986146-13.44

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_846604chr11_93733708_-ENSG00000168092.12ENST00000419197hsa-miR-1304-3p1171768571171768648mer-1a117176843117176864154-20.76

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PAFAH1B2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for PAFAH1B2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for PAFAH1B2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
ESCApathologic_stageCAediting_853624chr11_117159796_+0.02154426693546040.293818781257044

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Relation with survival for PAFAH1B2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for PAFAH1B2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PAFAH1B2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource