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Editing gene: NUCB1 (CAeditome ID:4924)

Gene summary for NUCB1

Gene summary

Gene information	Gene symbol	NUCB1
	Gene ID	4924
	Gene name	nucleobindin 1
	Synonyms	CALNUC\|NUC
	Cytomap	19q13.33
	Type of gene	protein-coding
	Description	nucleobindin-1
	Modification date	20210518
	UniProtAcc	Q02818
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
NUCB1	GO:0005793	Nucleobindin-1	15308636

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RNA A-to-I events for NUCB1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000104805.14

RNA A-to-I editing events in Cancer.

CAediting_1374262(48901508, +), CAediting_1374263(48901509, +), CAediting_1374264(48901578, +), CAediting_1374265(48901585, +), CAediting_1374266(48901599, +), CAediting_1374267(48901602, +), CAediting_1374268(48901604, +), CAediting_1374269(48901644, +), CAediting_1374270(48901689, +), CAediting_1374271(48901724, +), CAediting_1374272(48902174, +), CAediting_1374273(48902291, +), CAediting_1374274(48902308, +), CAediting_1374275(48902458, +), CAediting_1374276(48902536, +), CAediting_1374277(48902552, +), CAediting_1374278(48902672, +), CAediting_1374279(48902683, +), CAediting_1374280(48906132, +), CAediting_1374281(48906134, +), CAediting_1374282(48906150, +), CAediting_1374283(48906151, +), CAediting_1374284(48906178, +), CAediting_1374285(48906181, +), CAediting_1374286(48906199, +), CAediting_1374287(48906200, +), CAediting_1374288(48906218, +), CAediting_1374289(48906229, +), CAediting_1374290(48906243, +), CAediting_1374291(48906244, +), CAediting_1374292(48906247, +), CAediting_1374293(48906249, +), CAediting_1374294(48906253, +), CAediting_1374295(48906257, +), CAediting_1374296(48906265, +), CAediting_1374297(48906283, +), CAediting_1374298(48906284, +), CAediting_1374299(48906289, +), CAediting_1374300(48906297, +), CAediting_1374301(48906305, +), CAediting_1374302(48906310, +), CAediting_1374303(48906324, +), CAediting_1374304(48906325, +), CAediting_1374305(48906361, +), CAediting_1374306(48906455, +), CAediting_1374307(48906492, +), CAediting_1374308(48906520, +), CAediting_1374309(48906521, +), CAediting_1374310(48906537, +), CAediting_1374311(48906539, +), CAediting_1374312(48906559, +), CAediting_1374313(48906560, +), CAediting_1374314(48906564, +), CAediting_1374315(48906572, +), CAediting_1374316(48906617, +), CAediting_1374317(48906621, +), CAediting_1374318(48906672, +), CAediting_1374319(48906708, +), CAediting_1374320(48906710, +), CAediting_1374321(48906718, +), CAediting_1374322(48907038, +), CAediting_1374323(48907039, +), CAediting_1374324(48907092, +), CAediting_1374325(48907101, +), CAediting_1374326(48907114, +), CAediting_1374327(48907136, +), CAediting_1374328(48907402, +), CAediting_1374329(48907415, +), CAediting_1374330(48907428, +), CAediting_1374331(48907433, +), CAediting_1374332(48907442, +), CAediting_1374333(48907455, +), CAediting_1374334(48907484, +), CAediting_1374335(48907509, +), CAediting_1374336(48907510, +), CAediting_1374337(48907549, +), CAediting_1374338(48907551, +), CAediting_1374339(48908154, +), CAediting_1374340(48908162, +), CAediting_1374341(48908248, +), CAediting_1374342(48908270, +), CAediting_1374343(48908288, +), CAediting_1374344(48908317, +), CAediting_1374345(48908410, +), CAediting_1374346(48909317, +), CAediting_1374347(48909322, +), CAediting_1374348(48909341, +), CAediting_1374349(48909393, +), CAediting_1374350(48909400, +), CAediting_1374351(48909481, +), CAediting_1374352(48909490, +), CAediting_1374353(48909509, +), CAediting_1374354(48909515, +), CAediting_1374355(48909521, +), CAediting_1374356(48909671, +), CAediting_1374357(48909681, +), CAediting_1374358(48909683, +), CAediting_1374359(48909687, +), CAediting_1374360(48909689, +), CAediting_1374361(48909691, +), CAediting_1374362(48909701, +), CAediting_1374363(48909703, +), CAediting_1374364(48909777, +), CAediting_1374365(48910151, +), CAediting_1374366(48910194, +), CAediting_1374367(48910202, +), CAediting_1374368(48910206, +), CAediting_1374369(48910218, +), CAediting_1374370(48910226, +), CAediting_1374371(48910238, +), CAediting_1374372(48910250, +), CAediting_1374373(48910261, +), CAediting_1374374(48910263, +), CAediting_1374375(48910298, +), CAediting_1374376(48910338, +), CAediting_1374377(48910350, +), CAediting_1374378(48910424, +), CAediting_1374379(48910430, +), CAediting_1374380(48910431, +), CAediting_1374381(48910437, +), CAediting_1374382(48910476, +), CAediting_1374383(48910484, +), CAediting_1374384(48910485, +), CAediting_1374385(48910527, +), CAediting_1374386(48910531, +), CAediting_1374387(48910532, +), CAediting_1374388(48910533, +), CAediting_1374389(48910534, +), CAediting_1374390(48910536, +), CAediting_1374391(48910539, +), CAediting_1374392(48910541, +), CAediting_1374393(48910542, +), CAediting_1374394(48910545, +), CAediting_1374395(48910550, +), CAediting_1374396(48910561, +), CAediting_1374397(48910565, +), CAediting_1374398(48910571, +), CAediting_1374399(48910577, +), CAediting_1374400(48910581, +), CAediting_1374401(48910592, +), CAediting_1374402(48910599, +), CAediting_1374403(48910624, +), CAediting_1374404(48910690, +), CAediting_1374405(48910696, +), CAediting_1374406(48920617, +),

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RNA editing positional annotations for NUCB1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1374262	chr19_48901508_+	ncRNA_intronic
CAediting_1374263	chr19_48901509_+	ncRNA_intronic
CAediting_1374264	chr19_48901578_+	ncRNA_intronic
CAediting_1374265	chr19_48901585_+	ncRNA_intronic
CAediting_1374266	chr19_48901599_+	ncRNA_intronic
CAediting_1374267	chr19_48901602_+	ncRNA_intronic
CAediting_1374268	chr19_48901604_+	ncRNA_intronic
CAediting_1374269	chr19_48901644_+	ncRNA_intronic
CAediting_1374270	chr19_48901689_+	ncRNA_intronic
CAediting_1374271	chr19_48901724_+	ncRNA_intronic
CAediting_1374272	chr19_48902174_+	ncRNA_intronic
CAediting_1374273	chr19_48902291_+	ncRNA_intronic
CAediting_1374274	chr19_48902308_+	ncRNA_intronic
CAediting_1374275	chr19_48902458_+	ncRNA_intronic
CAediting_1374276	chr19_48902536_+	ncRNA_intronic
CAediting_1374277	chr19_48902552_+	ncRNA_intronic
CAediting_1374278	chr19_48902672_+	ncRNA_intronic
CAediting_1374279	chr19_48902683_+	ncRNA_intronic
CAediting_1374280	chr19_48906132_+	ncRNA_intronic
CAediting_1374281	chr19_48906134_+	ncRNA_intronic
CAediting_1374282	chr19_48906150_+	ncRNA_intronic
CAediting_1374283	chr19_48906151_+	ncRNA_intronic
CAediting_1374284	chr19_48906178_+	ncRNA_intronic
CAediting_1374285	chr19_48906181_+	ncRNA_intronic
CAediting_1374286	chr19_48906199_+	ncRNA_intronic
CAediting_1374287	chr19_48906200_+	ncRNA_intronic
CAediting_1374288	chr19_48906218_+	ncRNA_intronic
CAediting_1374289	chr19_48906229_+	ncRNA_intronic
CAediting_1374290	chr19_48906243_+	ncRNA_intronic
CAediting_1374291	chr19_48906244_+	ncRNA_intronic
CAediting_1374292	chr19_48906247_+	ncRNA_intronic
CAediting_1374293	chr19_48906249_+	ncRNA_intronic
CAediting_1374294	chr19_48906253_+	ncRNA_intronic
CAediting_1374295	chr19_48906257_+	ncRNA_intronic
CAediting_1374296	chr19_48906265_+	ncRNA_intronic
CAediting_1374297	chr19_48906283_+	ncRNA_intronic
CAediting_1374298	chr19_48906284_+	ncRNA_intronic
CAediting_1374299	chr19_48906289_+	ncRNA_intronic
CAediting_1374300	chr19_48906297_+	ncRNA_intronic
CAediting_1374301	chr19_48906305_+	ncRNA_intronic
CAediting_1374302	chr19_48906310_+	ncRNA_intronic
CAediting_1374303	chr19_48906324_+	ncRNA_intronic
CAediting_1374304	chr19_48906325_+	ncRNA_intronic
CAediting_1374305	chr19_48906361_+	ncRNA_intronic
CAediting_1374306	chr19_48906455_+	ncRNA_intronic
CAediting_1374307	chr19_48906492_+	ncRNA_intronic
CAediting_1374308	chr19_48906520_+	ncRNA_intronic
CAediting_1374309	chr19_48906521_+	ncRNA_intronic
CAediting_1374310	chr19_48906537_+	ncRNA_intronic
CAediting_1374311	chr19_48906539_+	ncRNA_intronic
CAediting_1374312	chr19_48906559_+	ncRNA_intronic
CAediting_1374313	chr19_48906560_+	ncRNA_intronic
CAediting_1374314	chr19_48906564_+	ncRNA_intronic
CAediting_1374315	chr19_48906572_+	ncRNA_intronic
CAediting_1374316	chr19_48906617_+	ncRNA_intronic
CAediting_1374317	chr19_48906621_+	ncRNA_intronic
CAediting_1374318	chr19_48906672_+	ncRNA_intronic
CAediting_1374319	chr19_48906708_+	ncRNA_intronic
CAediting_1374320	chr19_48906710_+	ncRNA_intronic
CAediting_1374321	chr19_48906718_+	ncRNA_intronic
CAediting_1374322	chr19_48907038_+	ncRNA_intronic
CAediting_1374323	chr19_48907039_+	ncRNA_intronic
CAediting_1374324	chr19_48907092_+	ncRNA_intronic
CAediting_1374325	chr19_48907101_+	ncRNA_intronic
CAediting_1374326	chr19_48907114_+	ncRNA_intronic
CAediting_1374327	chr19_48907136_+	ncRNA_intronic
CAediting_1374328	chr19_48907402_+	ncRNA_intronic
CAediting_1374329	chr19_48907415_+	ncRNA_intronic
CAediting_1374330	chr19_48907428_+	ncRNA_intronic
CAediting_1374331	chr19_48907433_+	ncRNA_intronic
CAediting_1374332	chr19_48907442_+	ncRNA_intronic
CAediting_1374333	chr19_48907455_+	ncRNA_intronic
CAediting_1374334	chr19_48907484_+	ncRNA_intronic
CAediting_1374335	chr19_48907509_+	ncRNA_intronic
CAediting_1374336	chr19_48907510_+	ncRNA_intronic
CAediting_1374337	chr19_48907549_+	ncRNA_intronic
CAediting_1374338	chr19_48907551_+	ncRNA_intronic
CAediting_1374339	chr19_48908154_+	ncRNA_intronic
CAediting_1374340	chr19_48908162_+	ncRNA_intronic
CAediting_1374341	chr19_48908248_+	ncRNA_intronic
CAediting_1374342	chr19_48908270_+	ncRNA_intronic
CAediting_1374343	chr19_48908288_+	ncRNA_intronic
CAediting_1374344	chr19_48908317_+	ncRNA_intronic
CAediting_1374345	chr19_48908410_+	ncRNA_intronic
CAediting_1374346	chr19_48909317_+	ncRNA_intronic
CAediting_1374347	chr19_48909322_+	ncRNA_intronic
CAediting_1374348	chr19_48909341_+	ncRNA_intronic
CAediting_1374349	chr19_48909393_+	ncRNA_intronic
CAediting_1374350	chr19_48909400_+	ncRNA_intronic
CAediting_1374351	chr19_48909481_+	ncRNA_intronic
CAediting_1374352	chr19_48909490_+	ncRNA_intronic
CAediting_1374353	chr19_48909509_+	ncRNA_intronic
CAediting_1374354	chr19_48909515_+	ncRNA_intronic
CAediting_1374355	chr19_48909521_+	ncRNA_intronic
CAediting_1374356	chr19_48909671_+	ncRNA_intronic
CAediting_1374357	chr19_48909681_+	ncRNA_intronic
CAediting_1374358	chr19_48909683_+	ncRNA_intronic
CAediting_1374359	chr19_48909687_+	ncRNA_intronic
CAediting_1374360	chr19_48909689_+	ncRNA_intronic
CAediting_1374361	chr19_48909691_+	ncRNA_intronic
CAediting_1374362	chr19_48909701_+	ncRNA_intronic
CAediting_1374363	chr19_48909703_+	ncRNA_intronic
CAediting_1374364	chr19_48909777_+	ncRNA_intronic
CAediting_1374365	chr19_48910151_+	ncRNA_intronic
CAediting_1374366	chr19_48910194_+	ncRNA_intronic
CAediting_1374367	chr19_48910202_+	ncRNA_intronic
CAediting_1374368	chr19_48910206_+	ncRNA_intronic
CAediting_1374369	chr19_48910218_+	ncRNA_intronic
CAediting_1374370	chr19_48910226_+	ncRNA_intronic
CAediting_1374371	chr19_48910238_+	ncRNA_intronic
CAediting_1374372	chr19_48910250_+	ncRNA_intronic
CAediting_1374373	chr19_48910261_+	ncRNA_intronic
CAediting_1374374	chr19_48910263_+	ncRNA_intronic
CAediting_1374375	chr19_48910298_+	ncRNA_intronic
CAediting_1374376	chr19_48910338_+	ncRNA_intronic
CAediting_1374377	chr19_48910350_+	ncRNA_intronic
CAediting_1374378	chr19_48910424_+	ncRNA_intronic
CAediting_1374379	chr19_48910430_+	ncRNA_intronic
CAediting_1374380	chr19_48910431_+	ncRNA_intronic
CAediting_1374381	chr19_48910437_+	ncRNA_intronic
CAediting_1374382	chr19_48910476_+	ncRNA_intronic
CAediting_1374383	chr19_48910484_+	ncRNA_intronic
CAediting_1374384	chr19_48910485_+	ncRNA_intronic
CAediting_1374385	chr19_48910527_+	ncRNA_intronic
CAediting_1374386	chr19_48910531_+	ncRNA_intronic
CAediting_1374387	chr19_48910532_+	ncRNA_intronic
CAediting_1374388	chr19_48910533_+	ncRNA_intronic
CAediting_1374389	chr19_48910534_+	ncRNA_intronic
CAediting_1374390	chr19_48910536_+	ncRNA_intronic
CAediting_1374391	chr19_48910539_+	ncRNA_intronic
CAediting_1374392	chr19_48910541_+	ncRNA_intronic
CAediting_1374393	chr19_48910542_+	ncRNA_intronic
CAediting_1374394	chr19_48910545_+	ncRNA_intronic
CAediting_1374395	chr19_48910550_+	ncRNA_intronic
CAediting_1374396	chr19_48910561_+	ncRNA_intronic
CAediting_1374397	chr19_48910565_+	ncRNA_intronic
CAediting_1374398	chr19_48910571_+	ncRNA_intronic
CAediting_1374399	chr19_48910577_+	ncRNA_intronic
CAediting_1374400	chr19_48910581_+	ncRNA_intronic
CAediting_1374401	chr19_48910592_+	ncRNA_intronic
CAediting_1374402	chr19_48910599_+	ncRNA_intronic
CAediting_1374403	chr19_48910624_+	ncRNA_intronic
CAediting_1374404	chr19_48910690_+	ncRNA_intronic
CAediting_1374405	chr19_48910696_+	ncRNA_intronic
CAediting_1374406	chr19_48920617_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1374262	chr19_48901508_+	SINE	Alu	AluSz6
CAediting_1374263	chr19_48901509_+	SINE	Alu	AluSz6
CAediting_1374264	chr19_48901578_+	SINE	Alu	AluSz6
CAediting_1374265	chr19_48901585_+	SINE	Alu	AluSz6
CAediting_1374266	chr19_48901599_+	SINE	Alu	AluSz6
CAediting_1374267	chr19_48901602_+	SINE	Alu	AluSz6
CAediting_1374268	chr19_48901604_+	SINE	Alu	AluSz6
CAediting_1374269	chr19_48901644_+	SINE	Alu	AluSz6
CAediting_1374270	chr19_48901689_+	SINE	Alu	AluSz6
CAediting_1374271	chr19_48901724_+	SINE	Alu	AluSz6
CAediting_1374272	chr19_48902174_+	SINE	Alu	AluSc
CAediting_1374273	chr19_48902291_+	SINE	Alu	AluSc
CAediting_1374274	chr19_48902308_+	SINE	Alu	AluSc
CAediting_1374275	chr19_48902458_+	SINE	Alu	AluJb
CAediting_1374276	chr19_48902536_+	SINE	Alu	AluJb
CAediting_1374277	chr19_48902552_+	SINE	Alu	AluJb
CAediting_1374278	chr19_48902672_+	SINE	Alu	AluJb
CAediting_1374279	chr19_48902683_+	SINE	Alu	AluJb
CAediting_1374280	chr19_48906132_+	SINE	Alu	AluSx
CAediting_1374281	chr19_48906134_+	SINE	Alu	AluSx
CAediting_1374282	chr19_48906150_+	SINE	Alu	AluSx
CAediting_1374283	chr19_48906151_+	SINE	Alu	AluSx
CAediting_1374284	chr19_48906178_+	SINE	Alu	AluSx
CAediting_1374285	chr19_48906181_+	SINE	Alu	AluSx
CAediting_1374286	chr19_48906199_+	SINE	Alu	AluSx
CAediting_1374287	chr19_48906200_+	SINE	Alu	AluSx
CAediting_1374288	chr19_48906218_+	SINE	Alu	AluSx
CAediting_1374289	chr19_48906229_+	SINE	Alu	AluSx
CAediting_1374290	chr19_48906243_+	SINE	Alu	AluSx
CAediting_1374291	chr19_48906244_+	SINE	Alu	AluSx
CAediting_1374292	chr19_48906247_+	SINE	Alu	AluSx
CAediting_1374293	chr19_48906249_+	SINE	Alu	AluSx
CAediting_1374294	chr19_48906253_+	SINE	Alu	AluSx
CAediting_1374295	chr19_48906257_+	SINE	Alu	AluSx
CAediting_1374296	chr19_48906265_+	SINE	Alu	AluSx
CAediting_1374297	chr19_48906283_+	SINE	Alu	AluSx
CAediting_1374298	chr19_48906284_+	SINE	Alu	AluSx
CAediting_1374299	chr19_48906289_+	SINE	Alu	AluSx
CAediting_1374300	chr19_48906297_+	SINE	Alu	AluSx
CAediting_1374301	chr19_48906305_+	SINE	Alu	AluSx
CAediting_1374302	chr19_48906310_+	SINE	Alu	AluSx
CAediting_1374303	chr19_48906324_+	SINE	Alu	AluSx
CAediting_1374304	chr19_48906325_+	SINE	Alu	AluSx
CAediting_1374305	chr19_48906361_+	SINE	Alu	AluSx
CAediting_1374306	chr19_48906455_+	SINE	Alu	AluJb
CAediting_1374307	chr19_48906492_+	SINE	Alu	AluJb
CAediting_1374308	chr19_48906520_+	SINE	Alu	AluJb
CAediting_1374309	chr19_48906521_+	SINE	Alu	AluJb
CAediting_1374310	chr19_48906537_+	SINE	Alu	AluJb
CAediting_1374311	chr19_48906539_+	SINE	Alu	AluJb
CAediting_1374312	chr19_48906559_+	SINE	Alu	AluJb
CAediting_1374313	chr19_48906560_+	SINE	Alu	AluJb
CAediting_1374314	chr19_48906564_+	SINE	Alu	AluJb
CAediting_1374315	chr19_48906572_+	SINE	Alu	AluJb
CAediting_1374316	chr19_48906617_+	SINE	Alu	AluJb
CAediting_1374317	chr19_48906621_+	SINE	Alu	AluJb
CAediting_1374318	chr19_48906672_+	SINE	Alu	AluJb
CAediting_1374319	chr19_48906708_+	SINE	Alu	AluJb
CAediting_1374320	chr19_48906710_+	SINE	Alu	AluJb
CAediting_1374321	chr19_48906718_+	SINE	Alu	AluJb
CAediting_1374322	chr19_48907038_+	SINE	Alu	AluY
CAediting_1374323	chr19_48907039_+	SINE	Alu	AluY
CAediting_1374324	chr19_48907092_+	SINE	Alu	AluY
CAediting_1374325	chr19_48907101_+	SINE	Alu	AluY
CAediting_1374326	chr19_48907114_+	SINE	Alu	AluY
CAediting_1374327	chr19_48907136_+	SINE	Alu	AluY
CAediting_1374328	chr19_48907402_+	SINE	Alu	AluSz6
CAediting_1374329	chr19_48907415_+	SINE	Alu	AluSz6
CAediting_1374330	chr19_48907428_+	SINE	Alu	AluSz6
CAediting_1374331	chr19_48907433_+	SINE	Alu	AluSz6
CAediting_1374332	chr19_48907442_+	SINE	Alu	AluSz6
CAediting_1374333	chr19_48907455_+	SINE	Alu	AluSz6
CAediting_1374334	chr19_48907484_+	SINE	Alu	AluSz6
CAediting_1374335	chr19_48907509_+	SINE	Alu	AluSz6
CAediting_1374336	chr19_48907510_+	SINE	Alu	AluSz6
CAediting_1374337	chr19_48907549_+	SINE	Alu	AluSz6
CAediting_1374338	chr19_48907551_+	SINE	Alu	AluSz6
CAediting_1374339	chr19_48908154_+	SINE	Alu	AluSx1
CAediting_1374340	chr19_48908162_+	SINE	Alu	AluSx1
CAediting_1374341	chr19_48908248_+	SINE	Alu	AluSx1
CAediting_1374342	chr19_48908270_+	SINE	Alu	AluSx1
CAediting_1374343	chr19_48908288_+	SINE	Alu	AluSx1
CAediting_1374344	chr19_48908317_+	SINE	Alu	AluSx1
CAediting_1374345	chr19_48908410_+	SINE	Alu	AluSx1
CAediting_1374346	chr19_48909317_+	SINE	Alu	AluSq
CAediting_1374347	chr19_48909322_+	SINE	Alu	AluSq
CAediting_1374348	chr19_48909341_+	SINE	Alu	AluSq
CAediting_1374349	chr19_48909393_+	SINE	Alu	AluSq
CAediting_1374350	chr19_48909400_+	SINE	Alu	AluSq
CAediting_1374351	chr19_48909481_+	SINE	Alu	AluSq
CAediting_1374352	chr19_48909490_+	SINE	Alu	AluSq
CAediting_1374353	chr19_48909509_+	SINE	Alu	AluSq
CAediting_1374354	chr19_48909515_+	SINE	Alu	AluSq
CAediting_1374355	chr19_48909521_+	SINE	Alu	AluSq
CAediting_1374356	chr19_48909671_+	SINE	Alu	AluJb
CAediting_1374357	chr19_48909681_+	SINE	Alu	AluJb
CAediting_1374358	chr19_48909683_+	SINE	Alu	AluJb
CAediting_1374359	chr19_48909687_+	SINE	Alu	AluJb
CAediting_1374360	chr19_48909689_+	SINE	Alu	AluJb
CAediting_1374361	chr19_48909691_+	SINE	Alu	AluJb
CAediting_1374362	chr19_48909701_+	SINE	Alu	AluJb
CAediting_1374363	chr19_48909703_+	SINE	Alu	AluJb
CAediting_1374364	chr19_48909777_+	SINE	Alu	AluJb
CAediting_1374365	chr19_48910151_+	SINE	Alu	AluSc
CAediting_1374366	chr19_48910194_+	SINE	Alu	AluSc
CAediting_1374367	chr19_48910202_+	SINE	Alu	AluSc
CAediting_1374368	chr19_48910206_+	SINE	Alu	AluSc
CAediting_1374369	chr19_48910218_+	SINE	Alu	AluSc
CAediting_1374370	chr19_48910226_+	SINE	Alu	AluSc
CAediting_1374371	chr19_48910238_+	SINE	Alu	AluSc
CAediting_1374372	chr19_48910250_+	SINE	Alu	AluSc
CAediting_1374373	chr19_48910261_+	SINE	Alu	AluSc
CAediting_1374374	chr19_48910263_+	SINE	Alu	AluSc
CAediting_1374375	chr19_48910298_+	SINE	Alu	AluSc
CAediting_1374376	chr19_48910338_+	SINE	Alu	AluSc
CAediting_1374377	chr19_48910350_+	SINE	Alu	AluSc
CAediting_1374378	chr19_48910424_+	SINE	Alu	AluSx
CAediting_1374379	chr19_48910430_+	SINE	Alu	AluSx
CAediting_1374380	chr19_48910431_+	SINE	Alu	AluSx
CAediting_1374381	chr19_48910437_+	SINE	Alu	AluSx
CAediting_1374382	chr19_48910476_+	SINE	Alu	AluSx
CAediting_1374383	chr19_48910484_+	SINE	Alu	AluSx
CAediting_1374384	chr19_48910485_+	SINE	Alu	AluSx
CAediting_1374385	chr19_48910527_+	SINE	Alu	AluSx
CAediting_1374386	chr19_48910531_+	SINE	Alu	AluSx
CAediting_1374387	chr19_48910532_+	SINE	Alu	AluSx
CAediting_1374388	chr19_48910533_+	SINE	Alu	AluSx
CAediting_1374389	chr19_48910534_+	SINE	Alu	AluSx
CAediting_1374390	chr19_48910536_+	SINE	Alu	AluSx
CAediting_1374391	chr19_48910539_+	SINE	Alu	AluSx
CAediting_1374392	chr19_48910541_+	SINE	Alu	AluSx
CAediting_1374393	chr19_48910542_+	SINE	Alu	AluSx
CAediting_1374394	chr19_48910545_+	SINE	Alu	AluSx
CAediting_1374395	chr19_48910550_+	SINE	Alu	AluSx
CAediting_1374396	chr19_48910561_+	SINE	Alu	AluSx
CAediting_1374397	chr19_48910565_+	SINE	Alu	AluSx
CAediting_1374398	chr19_48910571_+	SINE	Alu	AluSx
CAediting_1374399	chr19_48910577_+	SINE	Alu	AluSx
CAediting_1374400	chr19_48910581_+	SINE	Alu	AluSx
CAediting_1374401	chr19_48910592_+	SINE	Alu	AluSx
CAediting_1374402	chr19_48910599_+	SINE	Alu	AluSx
CAediting_1374403	chr19_48910624_+	SINE	Alu	AluSx
CAediting_1374404	chr19_48910690_+	SINE	Alu	AluSx
CAediting_1374405	chr19_48910696_+	SINE	Alu	AluSx
CAediting_1374406	chr19_48920617_+	SINE	Alu	AluSp

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RNA A-to-I editing events in the alternative splicing sites for NUCB1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_1374369	chr19_48910218_+	48910217:48910225	5SS	2+0i	CAGGTGCGC	9.1	CGGGTGCGC	6.64
MEX_2	CAediting_1374369	chr19_48910218_+	48910217:48910225	5SS	2+0i	CAGGTGCGC	9.1	CGGGTGCGC	6.64

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000104805.14.NUCB1.

Correlation between RNA A-to-I editing and PSI for ENSG00000104805.14.NUCB1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NUCB1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for NUCB1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for NUCB1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_396018	chr5_1062918_-	ENSG00000104805.14	ENST00000405315	hsa-miR-4635	48922882	48922889	8mer-1a	48922870	48922889	147	-22.17
CAediting_524911	chr7_5495852_-	ENSG00000104805.14	ENST00000405315	hsa-miR-589-3p	48922737	48922744	8mer-1a	48922722	48922744	148	-16.26
CAediting_396018	chr5_1062918_-	ENSG00000104805.14	ENST00000407032	hsa-miR-4635	48922882	48922889	8mer-1a	48922870	48922889	147	-22.17
CAediting_524911	chr7_5495852_-	ENSG00000104805.14	ENST00000407032	hsa-miR-589-3p	48922737	48922744	8mer-1a	48922722	48922744	148	-16.26
CAediting_468389	chr6_31355314_-	ENSG00000104805.14	ENST00000405315	hsa-miR-6891-5p	48923048	48923054	7mer-m8	48923034	48923055	159	-26.34
CAediting_468389	chr6_31355314_-	ENSG00000104805.14	ENST00000407032	hsa-miR-6891-5p	48923048	48923054	7mer-m8	48923034	48923055	159	-26.34

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_604450	chr7_133034877_-	ENSG00000104805.14	ENST00000405315	hsa-miR-3654	48922659	48922665	7mer-m8	48922646	48922666	152	-18.26
CAediting_748296	chr10_51299626_+	ENSG00000104805.14	ENST00000405315	hsa-miR-605-3p	48922646	48922652	7mer-m8	48922632	48922653	140	-15.37
CAediting_604450	chr7_133034877_-	ENSG00000104805.14	ENST00000407032	hsa-miR-3654	48922659	48922665	7mer-m8	48922646	48922666	152	-18.26

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NUCB1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for NUCB1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for NUCB1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for NUCB1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for NUCB1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
NUCB1	Q02818	DB11348	Calcium Phosphate	Nucleobindin-1	SmallMoleculeDrug	approved
NUCB1	Q02818	DB14481	Calcium phosphate dihydrate	Nucleobindin-1	SmallMoleculeDrug	approved
NUCB1	Q02818	DB11093	Calcium citrate	Nucleobindin-1	SmallMoleculeDrug	approved\|investigational

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RelatedDiseases for NUCB1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
NUCB1	C0014518	Toxic Epidermal Necrolysis	1	CTD_human
NUCB1	C0038325	Stevens-Johnson Syndrome	1	CTD_human
NUCB1	C1274933	Drug-Induced Stevens Johnson Syndrome	1	CTD_human
NUCB1	C3658301	Mycoplasma-Induced Stevens-Johnson Syndrome	1	CTD_human
NUCB1	C3658302	Stevens-Johnson Syndrome Toxic Epidermal Necrolysis Spectrum	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene