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Editing gene: ATOX1 (CAeditome ID:475)

Gene summary for ATOX1

Gene summary

Gene information	Gene symbol	ATOX1
	Gene ID	475
	Gene name	antioxidant 1 copper chaperone
	Synonyms	ATX1\|HAH1
	Cytomap	5q33.1
	Type of gene	protein-coding
	Description	copper transport protein ATOX1ATX1 antioxidant protein 1 homologmetal transport protein ATX1
	Modification date	20210518
	UniProtAcc	O00244
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ATOX1	GO:0005507	Copper transport protein ATOX1	12029094
ATOX1	GO:0016531	Copper transport protein ATOX1	12029094
ATOX1	GO:0032767	Copper transport protein ATOX1	31283225
ATOX1	GO:1903136	Copper transport protein ATOX1	31283225

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RNA A-to-I events for ATOX1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000177556.10

RNA A-to-I editing events in Cancer.

CAediting_442078(151745800, -), CAediting_442079(151745803, -), CAediting_442080(151745809, -), CAediting_442081(151745810, -), CAediting_442082(151745813, -), CAediting_442083(151745814, -), CAediting_442084(151745822, -), CAediting_442085(151745839, -), CAediting_442086(151745853, -), CAediting_442087(151745860, -), CAediting_442088(151745862, -), CAediting_442089(151745865, -), CAediting_442090(151745870, -), CAediting_442091(151745914, -), CAediting_442092(151745927, -), CAediting_442093(151745929, -), CAediting_442094(151746826, -), CAediting_442095(151746836, -), CAediting_442096(151746894, -), CAediting_442097(151746901, -), CAediting_442098(151746909, -), CAediting_442099(151747424, -), CAediting_442100(151747440, -), CAediting_442101(151747536, -), CAediting_442102(151747540, -), CAediting_442103(151747694, -), CAediting_442104(151747771, -), CAediting_442105(151748618, -), CAediting_442106(151748986, -), CAediting_442107(151748998, -), CAediting_442108(151749015, -), CAediting_442109(151749016, -), CAediting_442110(151749022, -), CAediting_442111(151749029, -), CAediting_442112(151749036, -), CAediting_442113(151749363, -), CAediting_442114(151749619, -), CAediting_442115(151750444, -), CAediting_442116(151750676, -), CAediting_442117(151750677, -), CAediting_442118(151750714, -), CAediting_442119(151750719, -), CAediting_442120(151750723, -), CAediting_442121(151750730, -), CAediting_442122(151750731, -), CAediting_442123(151750744, -), CAediting_442124(151750754, -), CAediting_442125(151750771, -), CAediting_442126(151750786, -), CAediting_442127(151750796, -), CAediting_442128(151750808, -), CAediting_442129(151750815, -), CAediting_442130(151750839, -), CAediting_442131(151750847, -), CAediting_442132(151750877, -), CAediting_442133(151750880, -), CAediting_442134(151750909, -), CAediting_442135(151750920, -), CAediting_442136(151750932, -), CAediting_442137(151750934, -), CAediting_442138(151767670, -), CAediting_442139(151767675, -), CAediting_442140(151767707, -), CAediting_442141(151767729, -), CAediting_442142(151767736, -), CAediting_442143(151767739, -), CAediting_442144(151767751, -), CAediting_442145(151767768, -), CAediting_442146(151767781, -), CAediting_442147(151767782, -), CAediting_442148(151767796, -), CAediting_442149(151767799, -), CAediting_442150(151767805, -), CAediting_442151(151767810, -), CAediting_442152(151767826, -), CAediting_442153(151767835, -), CAediting_442154(151767848, -), CAediting_442155(151767859, -), CAediting_442156(151767864, -), CAediting_442157(151767869, -), CAediting_442158(151767892, -), CAediting_442159(151767896, -), CAediting_442160(151767899, -), CAediting_442161(151767904, -), CAediting_442162(151767905, -), CAediting_442163(151767913, -), CAediting_442164(151767927, -), CAediting_442165(151768064, -), CAediting_442166(151768066, -), CAediting_442167(151768078, -), CAediting_442168(151768079, -), CAediting_442169(151768080, -), CAediting_442170(151768088, -), CAediting_442171(151768093, -), CAediting_442172(151768102, -), CAediting_442173(151768105, -), CAediting_442174(151768131, -), CAediting_442175(151768146, -), CAediting_442176(151768150, -), CAediting_442177(151768151, -), CAediting_442178(151768157, -), CAediting_442179(151768167, -), CAediting_442180(151768201, -), CAediting_442181(151768211, -), CAediting_442182(151768214, -), CAediting_442183(151768215, -), CAediting_442184(151768223, -), CAediting_442185(151768228, -), CAediting_442186(151768236, -), CAediting_442187(151768240, -), CAediting_442188(151768241, -), CAediting_442189(151768255, -), CAediting_442190(151768261, -), CAediting_442191(151768266, -), CAediting_442192(151768271, -), CAediting_442193(151768278, -), CAediting_442194(151768282, -), CAediting_442195(151768301, -), CAediting_442196(151768316, -), CAediting_442197(151768317, -), CAediting_442198(151768321, -), CAediting_442199(151768525, -), CAediting_442200(151768546, -), CAediting_442201(151768547, -), CAediting_442202(151768556, -), CAediting_442203(151768570, -), CAediting_442204(151768573, -), CAediting_442205(151768574, -), CAediting_442206(151768587, -), CAediting_442207(151768588, -), CAediting_442208(151768599, -), CAediting_442209(151768619, -), CAediting_442210(151768625, -), CAediting_442211(151768665, -), CAediting_442212(151768669, -), CAediting_442213(151768672, -), CAediting_442214(151768695, -), CAediting_442215(151768698, -), CAediting_442216(151768699, -), CAediting_442217(151768724, -), CAediting_442218(151768729, -), CAediting_442219(151768751, -), CAediting_442220(151768758, -), CAediting_442221(151768766, -), CAediting_442222(151769351, -), CAediting_442223(151769355, -), CAediting_442224(151769356, -), CAediting_442225(151769387, -), CAediting_442226(151769388, -), CAediting_442227(151769400, -), CAediting_442228(151769404, -), CAediting_442229(151769407, -), CAediting_442230(151769412, -), CAediting_442231(151769417, -), CAediting_442232(151769420, -), CAediting_442233(151769421, -), CAediting_442234(151769422, -), CAediting_442235(151769430, -), CAediting_442236(151769452, -), CAediting_442237(151769453, -), CAediting_442238(151769463, -), CAediting_442239(151769482, -), CAediting_442240(151769483, -), CAediting_442241(151769499, -), CAediting_442242(151769510, -), CAediting_442243(151769511, -), CAediting_442244(151769519, -), CAediting_442245(151769523, -), CAediting_442246(151769529, -), CAediting_442247(151769545, -), CAediting_442248(151769555, -), CAediting_442249(151769568, -), CAediting_442250(151769571, -), CAediting_442251(151769574, -), CAediting_442252(151769585, -), CAediting_442253(151769590, -), CAediting_442254(151769591, -), CAediting_442255(151769599, -), CAediting_442256(151769604, -), CAediting_442257(151769853, -), CAediting_442258(151769856, -), CAediting_442259(151769861, -), CAediting_442260(151769868, -), CAediting_442261(151769869, -), CAediting_442262(151769877, -), CAediting_442263(151769908, -), CAediting_442264(151769909, -), CAediting_442265(151769921, -), CAediting_442266(151769943, -), CAediting_442267(151769945, -), CAediting_442268(151769950, -), CAediting_442269(151769956, -), CAediting_442270(151769966, -), CAediting_442271(151769977, -), CAediting_442272(151769993, -), CAediting_442273(151770003, -), CAediting_442274(151770006, -), CAediting_442275(151770015, -), CAediting_442276(151770028, -), CAediting_442277(151770032, -), CAediting_442278(151770038, -), CAediting_442279(151770054, -), CAediting_442280(151770059, -), CAediting_442281(151770078, -), CAediting_442282(151770112, -), CAediting_442283(151770114, -),

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RNA editing positional annotations for ATOX1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_442078	chr5_151745800_-	ncRNA_intronic
CAediting_442079	chr5_151745803_-	ncRNA_intronic
CAediting_442080	chr5_151745809_-	ncRNA_intronic
CAediting_442081	chr5_151745810_-	ncRNA_intronic
CAediting_442082	chr5_151745813_-	ncRNA_intronic
CAediting_442083	chr5_151745814_-	ncRNA_intronic
CAediting_442084	chr5_151745822_-	ncRNA_intronic
CAediting_442085	chr5_151745839_-	ncRNA_intronic
CAediting_442086	chr5_151745853_-	ncRNA_intronic
CAediting_442087	chr5_151745860_-	ncRNA_intronic
CAediting_442088	chr5_151745862_-	ncRNA_intronic
CAediting_442089	chr5_151745865_-	ncRNA_intronic
CAediting_442090	chr5_151745870_-	ncRNA_intronic
CAediting_442091	chr5_151745914_-	ncRNA_intronic
CAediting_442092	chr5_151745927_-	ncRNA_intronic
CAediting_442093	chr5_151745929_-	ncRNA_intronic
CAediting_442094	chr5_151746826_-	intronic
CAediting_442095	chr5_151746836_-	intronic
CAediting_442096	chr5_151746894_-	intronic
CAediting_442097	chr5_151746901_-	intronic
CAediting_442098	chr5_151746909_-	intronic
CAediting_442099	chr5_151747424_-	intronic
CAediting_442100	chr5_151747440_-	intronic
CAediting_442101	chr5_151747536_-	intronic
CAediting_442102	chr5_151747540_-	intronic
CAediting_442103	chr5_151747694_-	intronic
CAediting_442104	chr5_151747771_-	intronic
CAediting_442105	chr5_151748618_-	intronic
CAediting_442106	chr5_151748986_-	intronic
CAediting_442107	chr5_151748998_-	intronic
CAediting_442108	chr5_151749015_-	intronic
CAediting_442109	chr5_151749016_-	intronic
CAediting_442110	chr5_151749022_-	intronic
CAediting_442111	chr5_151749029_-	intronic
CAediting_442112	chr5_151749036_-	intronic
CAediting_442113	chr5_151749363_-	intronic
CAediting_442114	chr5_151749619_-	intronic
CAediting_442115	chr5_151750444_-	intronic
CAediting_442116	chr5_151750676_-	intronic
CAediting_442117	chr5_151750677_-	intronic
CAediting_442118	chr5_151750714_-	intronic
CAediting_442119	chr5_151750719_-	intronic
CAediting_442120	chr5_151750723_-	intronic
CAediting_442121	chr5_151750730_-	intronic
CAediting_442122	chr5_151750731_-	intronic
CAediting_442123	chr5_151750744_-	intronic
CAediting_442124	chr5_151750754_-	intronic
CAediting_442125	chr5_151750771_-	intronic
CAediting_442126	chr5_151750786_-	intronic
CAediting_442127	chr5_151750796_-	intronic
CAediting_442128	chr5_151750808_-	intronic
CAediting_442129	chr5_151750815_-	intronic
CAediting_442130	chr5_151750839_-	intronic
CAediting_442131	chr5_151750847_-	intronic
CAediting_442132	chr5_151750877_-	intronic
CAediting_442133	chr5_151750880_-	intronic
CAediting_442134	chr5_151750909_-	intronic
CAediting_442135	chr5_151750920_-	intronic
CAediting_442136	chr5_151750932_-	intronic
CAediting_442137	chr5_151750934_-	intronic
CAediting_442138	chr5_151767670_-	intronic
CAediting_442139	chr5_151767675_-	intronic
CAediting_442140	chr5_151767707_-	intronic
CAediting_442141	chr5_151767729_-	intronic
CAediting_442142	chr5_151767736_-	intronic
CAediting_442143	chr5_151767739_-	intronic
CAediting_442144	chr5_151767751_-	intronic
CAediting_442145	chr5_151767768_-	intronic
CAediting_442146	chr5_151767781_-	intronic
CAediting_442147	chr5_151767782_-	intronic
CAediting_442148	chr5_151767796_-	intronic
CAediting_442149	chr5_151767799_-	intronic
CAediting_442150	chr5_151767805_-	intronic
CAediting_442151	chr5_151767810_-	intronic
CAediting_442152	chr5_151767826_-	intronic
CAediting_442153	chr5_151767835_-	intronic
CAediting_442154	chr5_151767848_-	intronic
CAediting_442155	chr5_151767859_-	intronic
CAediting_442156	chr5_151767864_-	intronic
CAediting_442157	chr5_151767869_-	intronic
CAediting_442158	chr5_151767892_-	intronic
CAediting_442159	chr5_151767896_-	intronic
CAediting_442160	chr5_151767899_-	intronic
CAediting_442161	chr5_151767904_-	intronic
CAediting_442162	chr5_151767905_-	intronic
CAediting_442163	chr5_151767913_-	intronic
CAediting_442164	chr5_151767927_-	intronic
CAediting_442165	chr5_151768064_-	intronic
CAediting_442166	chr5_151768066_-	intronic
CAediting_442167	chr5_151768078_-	intronic
CAediting_442168	chr5_151768079_-	intronic
CAediting_442169	chr5_151768080_-	intronic
CAediting_442170	chr5_151768088_-	intronic
CAediting_442171	chr5_151768093_-	intronic
CAediting_442172	chr5_151768102_-	intronic
CAediting_442173	chr5_151768105_-	intronic
CAediting_442174	chr5_151768131_-	intronic
CAediting_442175	chr5_151768146_-	intronic
CAediting_442176	chr5_151768150_-	intronic
CAediting_442177	chr5_151768151_-	intronic
CAediting_442178	chr5_151768157_-	intronic
CAediting_442179	chr5_151768167_-	intronic
CAediting_442180	chr5_151768201_-	intronic
CAediting_442181	chr5_151768211_-	intronic
CAediting_442182	chr5_151768214_-	intronic
CAediting_442183	chr5_151768215_-	intronic
CAediting_442184	chr5_151768223_-	intronic
CAediting_442185	chr5_151768228_-	intronic
CAediting_442186	chr5_151768236_-	intronic
CAediting_442187	chr5_151768240_-	intronic
CAediting_442188	chr5_151768241_-	intronic
CAediting_442189	chr5_151768255_-	intronic
CAediting_442190	chr5_151768261_-	intronic
CAediting_442191	chr5_151768266_-	intronic
CAediting_442192	chr5_151768271_-	intronic
CAediting_442193	chr5_151768278_-	intronic
CAediting_442194	chr5_151768282_-	intronic
CAediting_442195	chr5_151768301_-	intronic
CAediting_442196	chr5_151768316_-	intronic
CAediting_442197	chr5_151768317_-	intronic
CAediting_442198	chr5_151768321_-	intronic
CAediting_442199	chr5_151768525_-	intronic
CAediting_442200	chr5_151768546_-	intronic
CAediting_442201	chr5_151768547_-	intronic
CAediting_442202	chr5_151768556_-	intronic
CAediting_442203	chr5_151768570_-	intronic
CAediting_442204	chr5_151768573_-	intronic
CAediting_442205	chr5_151768574_-	intronic
CAediting_442206	chr5_151768587_-	intronic
CAediting_442207	chr5_151768588_-	intronic
CAediting_442208	chr5_151768599_-	intronic
CAediting_442209	chr5_151768619_-	intronic
CAediting_442210	chr5_151768625_-	intronic
CAediting_442211	chr5_151768665_-	intronic
CAediting_442212	chr5_151768669_-	intronic
CAediting_442213	chr5_151768672_-	intronic
CAediting_442214	chr5_151768695_-	intronic
CAediting_442215	chr5_151768698_-	intronic
CAediting_442216	chr5_151768699_-	intronic
CAediting_442217	chr5_151768724_-	intronic
CAediting_442218	chr5_151768729_-	intronic
CAediting_442219	chr5_151768751_-	intronic
CAediting_442220	chr5_151768758_-	intronic
CAediting_442221	chr5_151768766_-	intronic
CAediting_442222	chr5_151769351_-	intronic
CAediting_442223	chr5_151769355_-	intronic
CAediting_442224	chr5_151769356_-	intronic
CAediting_442225	chr5_151769387_-	intronic
CAediting_442226	chr5_151769388_-	intronic
CAediting_442227	chr5_151769400_-	intronic
CAediting_442228	chr5_151769404_-	intronic
CAediting_442229	chr5_151769407_-	intronic
CAediting_442230	chr5_151769412_-	intronic
CAediting_442231	chr5_151769417_-	intronic
CAediting_442232	chr5_151769420_-	intronic
CAediting_442233	chr5_151769421_-	intronic
CAediting_442234	chr5_151769422_-	intronic
CAediting_442235	chr5_151769430_-	intronic
CAediting_442236	chr5_151769452_-	intronic
CAediting_442237	chr5_151769453_-	intronic
CAediting_442238	chr5_151769463_-	intronic
CAediting_442239	chr5_151769482_-	intronic
CAediting_442240	chr5_151769483_-	intronic
CAediting_442241	chr5_151769499_-	intronic
CAediting_442242	chr5_151769510_-	intronic
CAediting_442243	chr5_151769511_-	intronic
CAediting_442244	chr5_151769519_-	intronic
CAediting_442245	chr5_151769523_-	intronic
CAediting_442246	chr5_151769529_-	intronic
CAediting_442247	chr5_151769545_-	intronic
CAediting_442248	chr5_151769555_-	intronic
CAediting_442249	chr5_151769568_-	intronic
CAediting_442250	chr5_151769571_-	intronic
CAediting_442251	chr5_151769574_-	intronic
CAediting_442252	chr5_151769585_-	intronic
CAediting_442253	chr5_151769590_-	intronic
CAediting_442254	chr5_151769591_-	intronic
CAediting_442255	chr5_151769599_-	intronic
CAediting_442256	chr5_151769604_-	intronic
CAediting_442257	chr5_151769853_-	UTR3
CAediting_442258	chr5_151769856_-	UTR3
CAediting_442259	chr5_151769861_-	UTR3
CAediting_442260	chr5_151769868_-	UTR3
CAediting_442261	chr5_151769869_-	UTR3
CAediting_442262	chr5_151769877_-	UTR3
CAediting_442263	chr5_151769908_-	UTR3
CAediting_442264	chr5_151769909_-	UTR3
CAediting_442265	chr5_151769921_-	UTR3
CAediting_442266	chr5_151769943_-	UTR3
CAediting_442267	chr5_151769945_-	UTR3
CAediting_442268	chr5_151769950_-	UTR3
CAediting_442269	chr5_151769956_-	UTR3
CAediting_442270	chr5_151769966_-	UTR3
CAediting_442271	chr5_151769977_-	UTR3
CAediting_442272	chr5_151769993_-	UTR3
CAediting_442273	chr5_151770003_-	UTR3
CAediting_442274	chr5_151770006_-	UTR3
CAediting_442275	chr5_151770015_-	UTR3
CAediting_442276	chr5_151770028_-	UTR3
CAediting_442277	chr5_151770032_-	UTR3
CAediting_442278	chr5_151770038_-	UTR3
CAediting_442279	chr5_151770054_-	UTR3
CAediting_442280	chr5_151770059_-	UTR3
CAediting_442281	chr5_151770078_-	UTR3
CAediting_442282	chr5_151770112_-	UTR3
CAediting_442283	chr5_151770114_-	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_442078	chr5_151745800_-	SINE	Alu	FAM
CAediting_442079	chr5_151745803_-	SINE	Alu	FAM
CAediting_442080	chr5_151745809_-	SINE	Alu	FAM
CAediting_442081	chr5_151745810_-	SINE	Alu	FAM
CAediting_442082	chr5_151745813_-	SINE	Alu	FAM
CAediting_442083	chr5_151745814_-	SINE	Alu	FAM
CAediting_442084	chr5_151745822_-	SINE	Alu	FAM
CAediting_442085	chr5_151745839_-	SINE	Alu	FAM
CAediting_442086	chr5_151745853_-	SINE	Alu	FAM
CAediting_442087	chr5_151745860_-	SINE	Alu	FAM
CAediting_442088	chr5_151745862_-	SINE	Alu	FAM
CAediting_442089	chr5_151745865_-	SINE	Alu	FAM
CAediting_442090	chr5_151745870_-	SINE	Alu	FAM
CAediting_442091	chr5_151745914_-	SINE	Alu	FAM
CAediting_442092	chr5_151745927_-	SINE	Alu	FAM
CAediting_442093	chr5_151745929_-	SINE	Alu	FAM
CAediting_442094	chr5_151746826_-	SINE	Alu	AluSz6
CAediting_442095	chr5_151746836_-	SINE	Alu	AluSz6
CAediting_442096	chr5_151746894_-	SINE	Alu	AluSz6
CAediting_442097	chr5_151746901_-	SINE	Alu	AluSz6
CAediting_442098	chr5_151746909_-	SINE	Alu	AluSz6
CAediting_442099	chr5_151747424_-	SINE	Alu	AluJo
CAediting_442100	chr5_151747440_-	SINE	Alu	AluJo
CAediting_442101	chr5_151747536_-	SINE	Alu	AluJo
CAediting_442102	chr5_151747540_-	SINE	Alu	AluJo
CAediting_442103	chr5_151747694_-	SINE	Alu	AluSx
CAediting_442104	chr5_151747771_-	SINE	Alu	AluSx
CAediting_442105	chr5_151748618_-	SINE	Alu	AluSz
CAediting_442106	chr5_151748986_-	SINE	Alu	AluJr
CAediting_442107	chr5_151748998_-	SINE	Alu	AluJr
CAediting_442108	chr5_151749015_-	SINE	Alu	AluJr
CAediting_442109	chr5_151749016_-	SINE	Alu	AluJr
CAediting_442110	chr5_151749022_-	SINE	Alu	AluJr
CAediting_442111	chr5_151749029_-	SINE	Alu	AluJr
CAediting_442112	chr5_151749036_-	SINE	Alu	AluJr
CAediting_442113	chr5_151749363_-	SINE	Alu	AluSp
CAediting_442114	chr5_151749619_-	SINE	Alu	AluSx1
CAediting_442115	chr5_151750444_-	SINE	Alu	AluSz
CAediting_442116	chr5_151750676_-	SINE	Alu	AluJb
CAediting_442117	chr5_151750677_-	SINE	Alu	AluJb
CAediting_442118	chr5_151750714_-	SINE	Alu	AluJb
CAediting_442119	chr5_151750719_-	SINE	Alu	AluJb
CAediting_442120	chr5_151750723_-	SINE	Alu	AluJb
CAediting_442121	chr5_151750730_-	SINE	Alu	AluJb
CAediting_442122	chr5_151750731_-	SINE	Alu	AluJb
CAediting_442123	chr5_151750744_-	SINE	Alu	AluJb
CAediting_442124	chr5_151750754_-	SINE	Alu	AluJb
CAediting_442125	chr5_151750771_-	SINE	Alu	AluJb
CAediting_442126	chr5_151750786_-	SINE	Alu	AluJb
CAediting_442127	chr5_151750796_-	SINE	Alu	AluJb
CAediting_442128	chr5_151750808_-	SINE	Alu	AluJb
CAediting_442129	chr5_151750815_-	SINE	Alu	AluJb
CAediting_442130	chr5_151750839_-	SINE	Alu	AluJb
CAediting_442131	chr5_151750847_-	SINE	Alu	AluJb
CAediting_442132	chr5_151750877_-	SINE	Alu	AluJb
CAediting_442133	chr5_151750880_-	SINE	Alu	AluJb
CAediting_442134	chr5_151750909_-	SINE	Alu	AluJb
CAediting_442135	chr5_151750920_-	SINE	Alu	AluJb
CAediting_442136	chr5_151750932_-	SINE	Alu	AluJb
CAediting_442137	chr5_151750934_-	SINE	Alu	AluJb
CAediting_442138	chr5_151767670_-	SINE	Alu	AluSx1
CAediting_442139	chr5_151767675_-	SINE	Alu	AluSx1
CAediting_442140	chr5_151767707_-	SINE	Alu	AluSx1
CAediting_442141	chr5_151767729_-	SINE	Alu	AluSx1
CAediting_442142	chr5_151767736_-	SINE	Alu	AluSx1
CAediting_442143	chr5_151767739_-	SINE	Alu	AluSx1
CAediting_442144	chr5_151767751_-	SINE	Alu	AluSx1
CAediting_442145	chr5_151767768_-	SINE	Alu	AluSx1
CAediting_442146	chr5_151767781_-	SINE	Alu	AluSx1
CAediting_442147	chr5_151767782_-	SINE	Alu	AluSx1
CAediting_442148	chr5_151767796_-	SINE	Alu	AluSx1
CAediting_442149	chr5_151767799_-	SINE	Alu	AluSx1
CAediting_442150	chr5_151767805_-	SINE	Alu	AluSx1
CAediting_442151	chr5_151767810_-	SINE	Alu	AluSx1
CAediting_442152	chr5_151767826_-	SINE	Alu	AluSx1
CAediting_442153	chr5_151767835_-	SINE	Alu	AluSx1
CAediting_442154	chr5_151767848_-	SINE	Alu	AluSx1
CAediting_442155	chr5_151767859_-	SINE	Alu	AluSx1
CAediting_442156	chr5_151767864_-	SINE	Alu	AluSx1
CAediting_442157	chr5_151767869_-	SINE	Alu	AluSx1
CAediting_442158	chr5_151767892_-	SINE	Alu	AluSx1
CAediting_442159	chr5_151767896_-	SINE	Alu	AluSx1
CAediting_442160	chr5_151767899_-	SINE	Alu	AluSx1
CAediting_442161	chr5_151767904_-	SINE	Alu	AluSx1
CAediting_442162	chr5_151767905_-	SINE	Alu	AluSx1
CAediting_442163	chr5_151767913_-	SINE	Alu	AluSx1
CAediting_442164	chr5_151767927_-	SINE	Alu	AluSx1
CAediting_442165	chr5_151768064_-	SINE	Alu	AluJo
CAediting_442166	chr5_151768066_-	SINE	Alu	AluJo
CAediting_442167	chr5_151768078_-	SINE	Alu	AluJo
CAediting_442168	chr5_151768079_-	SINE	Alu	AluJo
CAediting_442169	chr5_151768080_-	SINE	Alu	AluJo
CAediting_442170	chr5_151768088_-	SINE	Alu	AluJo
CAediting_442171	chr5_151768093_-	SINE	Alu	AluJo
CAediting_442172	chr5_151768102_-	SINE	Alu	AluJo
CAediting_442173	chr5_151768105_-	SINE	Alu	AluJo
CAediting_442174	chr5_151768131_-	SINE	Alu	AluJo
CAediting_442175	chr5_151768146_-	SINE	Alu	AluJo
CAediting_442176	chr5_151768150_-	SINE	Alu	AluJo
CAediting_442177	chr5_151768151_-	SINE	Alu	AluJo
CAediting_442178	chr5_151768157_-	SINE	Alu	AluJo
CAediting_442179	chr5_151768167_-	SINE	Alu	AluJo
CAediting_442180	chr5_151768201_-	SINE	Alu	AluJo
CAediting_442181	chr5_151768211_-	SINE	Alu	AluJo
CAediting_442182	chr5_151768214_-	SINE	Alu	AluJo
CAediting_442183	chr5_151768215_-	SINE	Alu	AluJo
CAediting_442184	chr5_151768223_-	SINE	Alu	AluJo
CAediting_442185	chr5_151768228_-	SINE	Alu	AluJo
CAediting_442186	chr5_151768236_-	SINE	Alu	AluJo
CAediting_442187	chr5_151768240_-	SINE	Alu	AluJo
CAediting_442188	chr5_151768241_-	SINE	Alu	AluJo
CAediting_442189	chr5_151768255_-	SINE	Alu	AluJo
CAediting_442190	chr5_151768261_-	SINE	Alu	AluJo
CAediting_442191	chr5_151768266_-	SINE	Alu	AluJo
CAediting_442192	chr5_151768271_-	SINE	Alu	AluJo
CAediting_442193	chr5_151768278_-	SINE	Alu	AluJo
CAediting_442194	chr5_151768282_-	SINE	Alu	AluJo
CAediting_442195	chr5_151768301_-	SINE	Alu	AluJo
CAediting_442196	chr5_151768316_-	SINE	Alu	AluJo
CAediting_442197	chr5_151768317_-	SINE	Alu	AluJo
CAediting_442198	chr5_151768321_-	SINE	Alu	AluJo
CAediting_442199	chr5_151768525_-	SINE	Alu	AluJr4
CAediting_442200	chr5_151768546_-	SINE	Alu	AluJr4
CAediting_442201	chr5_151768547_-	SINE	Alu	AluJr4
CAediting_442202	chr5_151768556_-	SINE	Alu	AluJr4
CAediting_442203	chr5_151768570_-	SINE	Alu	AluJr4
CAediting_442204	chr5_151768573_-	SINE	Alu	AluJr4
CAediting_442205	chr5_151768574_-	SINE	Alu	AluJr4
CAediting_442206	chr5_151768587_-	SINE	Alu	AluJr4
CAediting_442207	chr5_151768588_-	SINE	Alu	AluJr4
CAediting_442208	chr5_151768599_-	SINE	Alu	AluJr4
CAediting_442209	chr5_151768619_-	SINE	Alu	AluJr4
CAediting_442210	chr5_151768625_-	SINE	Alu	AluJr4
CAediting_442211	chr5_151768665_-	SINE	Alu	AluJr4
CAediting_442212	chr5_151768669_-	SINE	Alu	AluJr4
CAediting_442213	chr5_151768672_-	SINE	Alu	AluJr4
CAediting_442214	chr5_151768695_-	SINE	Alu	AluJr4
CAediting_442215	chr5_151768698_-	SINE	Alu	AluJr4
CAediting_442216	chr5_151768699_-	SINE	Alu	AluJr4
CAediting_442217	chr5_151768724_-	SINE	Alu	AluJr4
CAediting_442218	chr5_151768729_-	SINE	Alu	AluJr4
CAediting_442219	chr5_151768751_-	SINE	Alu	AluJr4
CAediting_442220	chr5_151768758_-	SINE	Alu	AluJr4
CAediting_442221	chr5_151768766_-	SINE	Alu	AluJr4
CAediting_442222	chr5_151769351_-	SINE	Alu	AluSx
CAediting_442223	chr5_151769355_-	SINE	Alu	AluSx
CAediting_442224	chr5_151769356_-	SINE	Alu	AluSx
CAediting_442225	chr5_151769387_-	SINE	Alu	AluSx
CAediting_442226	chr5_151769388_-	SINE	Alu	AluSx
CAediting_442227	chr5_151769400_-	SINE	Alu	AluSx
CAediting_442228	chr5_151769404_-	SINE	Alu	AluSx
CAediting_442229	chr5_151769407_-	SINE	Alu	AluSx
CAediting_442230	chr5_151769412_-	SINE	Alu	AluSx
CAediting_442231	chr5_151769417_-	SINE	Alu	AluSx
CAediting_442232	chr5_151769420_-	SINE	Alu	AluSx
CAediting_442233	chr5_151769421_-	SINE	Alu	AluSx
CAediting_442234	chr5_151769422_-	SINE	Alu	AluSx
CAediting_442235	chr5_151769430_-	SINE	Alu	AluSx
CAediting_442236	chr5_151769452_-	SINE	Alu	AluSx
CAediting_442237	chr5_151769453_-	SINE	Alu	AluSx
CAediting_442238	chr5_151769463_-	SINE	Alu	AluSx
CAediting_442239	chr5_151769482_-	SINE	Alu	AluSx
CAediting_442240	chr5_151769483_-	SINE	Alu	AluSx
CAediting_442241	chr5_151769499_-	SINE	Alu	AluSx
CAediting_442242	chr5_151769510_-	SINE	Alu	AluSx
CAediting_442243	chr5_151769511_-	SINE	Alu	AluSx
CAediting_442244	chr5_151769519_-	SINE	Alu	AluSx
CAediting_442245	chr5_151769523_-	SINE	Alu	AluSx
CAediting_442246	chr5_151769529_-	SINE	Alu	AluSx
CAediting_442247	chr5_151769545_-	SINE	Alu	AluSx
CAediting_442248	chr5_151769555_-	SINE	Alu	AluSx
CAediting_442249	chr5_151769568_-	SINE	Alu	AluSx
CAediting_442250	chr5_151769571_-	SINE	Alu	AluSx
CAediting_442251	chr5_151769574_-	SINE	Alu	AluSx
CAediting_442252	chr5_151769585_-	SINE	Alu	AluSx
CAediting_442253	chr5_151769590_-	SINE	Alu	AluSx
CAediting_442254	chr5_151769591_-	SINE	Alu	AluSx
CAediting_442255	chr5_151769599_-	SINE	Alu	AluSx
CAediting_442256	chr5_151769604_-	SINE	Alu	AluSx
CAediting_442257	chr5_151769853_-	SINE	Alu	AluSx
CAediting_442258	chr5_151769856_-	SINE	Alu	AluSx
CAediting_442259	chr5_151769861_-	SINE	Alu	AluSx
CAediting_442260	chr5_151769868_-	SINE	Alu	AluSx
CAediting_442261	chr5_151769869_-	SINE	Alu	AluSx
CAediting_442262	chr5_151769877_-	SINE	Alu	AluSx
CAediting_442263	chr5_151769908_-	SINE	Alu	AluSx
CAediting_442264	chr5_151769909_-	SINE	Alu	AluSx
CAediting_442265	chr5_151769921_-	SINE	Alu	AluSx
CAediting_442266	chr5_151769943_-	SINE	Alu	AluSx
CAediting_442267	chr5_151769945_-	SINE	Alu	AluSx
CAediting_442268	chr5_151769950_-	SINE	Alu	AluSx
CAediting_442269	chr5_151769956_-	SINE	Alu	AluSx
CAediting_442270	chr5_151769966_-	SINE	Alu	AluSx
CAediting_442271	chr5_151769977_-	SINE	Alu	AluSx
CAediting_442272	chr5_151769993_-	SINE	Alu	AluSx
CAediting_442273	chr5_151770003_-	SINE	Alu	AluSx
CAediting_442274	chr5_151770006_-	SINE	Alu	AluSx
CAediting_442275	chr5_151770015_-	SINE	Alu	AluSx
CAediting_442276	chr5_151770028_-	SINE	Alu	AluSx
CAediting_442277	chr5_151770032_-	SINE	Alu	AluSx
CAediting_442278	chr5_151770038_-	SINE	Alu	AluSx
CAediting_442279	chr5_151770054_-	SINE	Alu	AluSx
CAediting_442280	chr5_151770059_-	SINE	Alu	AluSx
CAediting_442281	chr5_151770078_-	SINE	Alu	AluSx
CAediting_442282	chr5_151770112_-	SINE	Alu	AluSx
CAediting_442283	chr5_151770114_-	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for ATOX1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000177556.10.ATOX1.

Correlation between RNA A-to-I editing and PSI for ENSG00000177556.10.ATOX1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATOX1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ATOX1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ATOX1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_442083	chr5_151745814_-	ENSG00000177556.10	ENST00000521264	hsa-miR-510-5p	151745810	151745816	7mer-1a	151745810	151745833	140.00	-20.44
CAediting_442090	chr5_151745870_-	ENSG00000177556.10	ENST00000521264	hsa-miR-767-5p	151745865	151745872	8mer-1a	151745865	151745889	156.00	-22.32
CAediting_442092	chr5_151745927_-	ENSG00000177556.10	ENST00000521264	hsa-miR-340-3p	151745926	151745932	7mer-m8	151745925	151745947	151.00	-17.60
CAediting_442092	chr5_151745927_-	ENSG00000177556.10	ENST00000521264	hsa-miR-6827-3p	151745926	151745932	7mer-m8	151745925	151745945	140.00	-16.77
CAediting_442079	chr5_151745803_-	ENSG00000177556.10	ENST00000521264	hsa-miR-3925-3p	151745803	151745809	7mer-m8	151745802	151745824	152.00	-16.67
CAediting_442079	chr5_151745803_-	ENSG00000177556.10	ENST00000521264	hsa-miR-7705	151745798	151745805	8mer-1a	151745798	151745821	141.00	-12.59
CAediting_442080	chr5_151745809_-	ENSG00000177556.10	ENST00000521264	hsa-miR-5690	151745806	151745812	7mer-m8	151745805	151745825	145.00	-16.74
CAediting_442081	chr5_151745810_-	ENSG00000177556.10	ENST00000521264	hsa-miR-4704-3p	151745806	151745812	7mer-m8	151745805	151745826	147.00	-13.10
CAediting_442085	chr5_151745839_-	ENSG00000177556.10	ENST00000521264	hsa-miR-1199-5p	151745839	151745845	7mer-m8	151745838	151745857	156.00	-28.57
CAediting_442085	chr5_151745839_-	ENSG00000177556.10	ENST00000521264	hsa-miR-3622a-3p	151745835	151745842	8mer-1a	151745835	151745856	148.00	-19.86
CAediting_442085	chr5_151745839_-	ENSG00000177556.10	ENST00000521264	hsa-miR-3622b-3p	151745835	151745842	8mer-1a	151745835	151745855	157.00	-24.67
CAediting_442085	chr5_151745839_-	ENSG00000177556.10	ENST00000521264	hsa-miR-6751-3p	151745839	151745845	7mer-m8	151745838	151745858	141.00	-13.15
CAediting_442088	chr5_151745862_-	ENSG00000177556.10	ENST00000521264	hsa-miR-139-5p	151745859	151745865	7mer-m8	151745858	151745882	165.00	-26.17
CAediting_442088	chr5_151745862_-	ENSG00000177556.10	ENST00000521264	hsa-miR-148a-3p	151745862	151745868	7mer-m8	151745861	151745882	155.00	-18.41
CAediting_442088	chr5_151745862_-	ENSG00000177556.10	ENST00000521264	hsa-miR-148b-3p	151745862	151745868	7mer-m8	151745861	151745882	143.00	-15.31
CAediting_442088	chr5_151745862_-	ENSG00000177556.10	ENST00000521264	hsa-miR-152-3p	151745862	151745868	7mer-m8	151745861	151745885	148.00	-17.95
CAediting_442088	chr5_151745862_-	ENSG00000177556.10	ENST00000521264	hsa-miR-548v	151745858	151745864	7mer-m8	151745857	151745880	158.00	-18.95
CAediting_442089	chr5_151745865_-	ENSG00000177556.10	ENST00000521264	hsa-miR-106b-3p	151745865	151745870	6mer	151745864	151745885	143.00	-22.34
CAediting_442093	chr5_151745929_-	ENSG00000177556.10	ENST00000521264	hsa-miR-6890-3p	151745924	151745930	7mer-m8	151745923	151745942	149.00	-17.28
CAediting_442078	chr5_151745800_-	ENSG00000177556.10	ENST00000521264	hsa-miR-139-5p	151745797	151745803	7mer-m8	151745796	151745818	150.00	-18.34
CAediting_442078	chr5_151745800_-	ENSG00000177556.10	ENST00000521264	hsa-miR-582-5p	151745798	151745804	7mer-m8	151745797	151745817	146.00	-21.80
CAediting_442078	chr5_151745800_-	ENSG00000177556.10	ENST00000521264	hsa-miR-584-3p	151745800	151745806	7mer-m8	151745799	151745822	151.00	-22.65
CAediting_442087	chr5_151745860_-	ENSG00000177556.10	ENST00000521264	hsa-miR-15a-3p	151745856	151745862	7mer-m8	151745855	151745876	165.00	-18.90
CAediting_442087	chr5_151745860_-	ENSG00000177556.10	ENST00000521264	hsa-miR-4753-5p	151745855	151745861	7mer-m8	151745854	151745875	147.00	-12.65

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_442080	chr5_151745809_-	ENSG00000177556.10	ENST00000521264	hsa-miR-145-5p	151745803	151745810	8mer-1a	151745803	151745824	143	-13.4
CAediting_442084	chr5_151745822_-	ENSG00000177556.10	ENST00000521264	hsa-miR-3929	151745818	151745824	7mer-m8	151745817	151745839	154	-21.37
CAediting_442086	chr5_151745853_-	ENSG00000177556.10	ENST00000521264	hsa-miR-4424	151745849	151745855	7mer-m8	151745848	151745871	145	-10.02
CAediting_442084	chr5_151745822_-	ENSG00000177556.10	ENST00000521264	hsa-miR-4478	151745818	151745824	7mer-m8	151745817	151745832	149	-22.36
CAediting_442084	chr5_151745822_-	ENSG00000177556.10	ENST00000521264	hsa-miR-4649-3p	151745821	151745827	7mer-m8	151745820	151745840	143	-14.84
CAediting_442088	chr5_151745862_-	ENSG00000177556.10	ENST00000521264	hsa-miR-4671-3p	151745862	151745868	7mer-m8	151745861	151745881	145	-14.18
CAediting_442089	chr5_151745865_-	ENSG00000177556.10	ENST00000521264	hsa-miR-4671-3p	151745862	151745868	7mer-m8	151745861	151745881	145	-14.18
CAediting_442092	chr5_151745927_-	ENSG00000177556.10	ENST00000521264	hsa-miR-6760-3p	151745924	151745930	7mer-m8	151745923	151745943	142	-16.23
CAediting_442093	chr5_151745929_-	ENSG00000177556.10	ENST00000521264	hsa-miR-6760-3p	151745924	151745930	7mer-m8	151745923	151745943	142	-16.23
CAediting_442084	chr5_151745822_-	ENSG00000177556.10	ENST00000521264	hsa-miR-6765-5p	151745822	151745827	6mer	151745821	151745845	142	-23.69
CAediting_442084	chr5_151745822_-	ENSG00000177556.10	ENST00000521264	hsa-miR-7160-5p	151745820	151745826	7mer-m8	151745819	151745839	151	-18.69
CAediting_442084	chr5_151745822_-	ENSG00000177556.10	ENST00000521264	hsa-miR-7162-3p	151745821	151745826	6mer	151745820	151745839	144	-18.36
CAediting_442080	chr5_151745809_-	ENSG00000177556.10	ENST00000521264	hsa-miR-935	151745806	151745812	7mer-m8	151745805	151745827	140	-14.38
CAediting_442081	chr5_151745810_-	ENSG00000177556.10	ENST00000521264	hsa-miR-935	151745806	151745812	7mer-m8	151745805	151745827	140	-14.38

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000177556.10	ENST00000521264	hsa-miR-605-3p	151745632	151745638	7mer-m8	151745631	151745655	146	-18.17
CAediting_980496	chr14_31014685_-	ENSG00000177556.10	ENST00000521264	hsa-miR-624-3p	151744182	151744189	8mer-1a	151744182	151744201	143	-11.64
CAediting_980496	chr14_31014685_-	ENSG00000177556.10	ENST00000521264	hsa-miR-624-3p	151746073	151746079	7mer-m8	151746072	151746094	149	-20.74
CAediting_980496	chr14_31014685_-	ENSG00000177556.10	ENST00000521264	hsa-miR-624-3p	151742717	151742724	8mer-1a	151742717	151742736	149	-15.53
CAediting_980496	chr14_31014685_-	ENSG00000177556.10	ENST00000522710	hsa-miR-624-3p	151746073	151746079	7mer-m8	151746072	151746094	149	-20.74
CAediting_1054808	chr15_66496985_-	ENSG00000177556.10	ENST00000521264	hsa-miR-4512	151746264	151746271	8mer-1a	151746264	151746285	157	-30.13
CAediting_1229414	chr17_67471546_+	ENSG00000177556.10	ENST00000521264	hsa-miR-548aa	151744940	151744946	7mer-m8	151744939	151744962	156	-12.45
CAediting_1229414	chr17_67471546_+	ENSG00000177556.10	ENST00000521264	hsa-miR-548aa	151742801	151742807	7mer-m8	151742800	151742828	152	-12.63
CAediting_1229415	chr17_67471547_+	ENSG00000177556.10	ENST00000521264	hsa-miR-548aa	151745767	151745773	7mer-m8	151745766	151745790	152	-10.58
CAediting_1351755	chr19_40282625_-	ENSG00000177556.10	ENST00000521264	hsa-miR-641	151746045	151746051	7mer-m8	151746044	151746067	154	-16.94
CAediting_86358	chr1_109598906_+	ENSG00000177556.10	ENST00000521264	hsa-miR-197-5p	151744779	151744785	7mer-m8	151744778	151744801	160	-24.66
CAediting_1399425	chr20_1392958_-	ENSG00000177556.10	ENST00000521264	hsa-miR-6869-5p	151744153	151744159	7mer-m8	151744152	151744173	167	-24.95
CAediting_228905	chr2_188297554_+	ENSG00000177556.10	ENST00000521264	hsa-miR-561-3p	151743762	151743768	7mer-m8	151743761	151743781	147	-12.1
CAediting_524911	chr7_5495852_-	ENSG00000177556.10	ENST00000521264	hsa-miR-589-3p	151743801	151743807	7mer-m8	151743800	151743823	140	-11.77
CAediting_1054808	chr15_66496985_-	ENSG00000177556.10	ENST00000522710	hsa-miR-4512	151746264	151746271	8mer-1a	151746264	151746285	157	-30.13

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1368054	chr19_46709310_-	ENSG00000177556.10	ENST00000521264	hsa-miR-320e	151743480	151743486	7mer-m8	151743479	151743496	148	-16.37
CAediting_414656	chr5_72878640_+	ENSG00000177556.10	ENST00000521264	hsa-miR-4804-3p	151742523	151742530	8mer-1a	151742523	151742543	147	-10.51
CAediting_524911	chr7_5495852_-	ENSG00000177556.10	ENST00000521264	hsa-miR-589-3p	151745135	151745141	7mer-m8	151745134	151745164	148	-21.21
CAediting_1351755	chr19_40282625_-	ENSG00000177556.10	ENST00000521264	hsa-miR-641	151743452	151743458	7mer-m8	151743451	151743475	141	-12.24
CAediting_468389	chr6_31355314_-	ENSG00000177556.10	ENST00000521264	hsa-miR-6891-5p	151745178	151745184	7mer-m8	151745177	151745195	140	-13.72

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ATOX1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000521264.4	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_442078	ENST00000521264.4	chr5_151745800_-	-1331.90	-1329.40	-1349.60
CAediting_442079	ENST00000521264.4	chr5_151745803_-	-1332.90	-1329.40	-1349.60
CAediting_442080	ENST00000521264.4	chr5_151745809_-	-1330.20	-1329.40	-1349.60
CAediting_442081	ENST00000521264.4	chr5_151745810_-	-1330.30	-1329.40	-1349.60
CAediting_442082	ENST00000521264.4	chr5_151745813_-	-1333.30	-1329.40	-1349.60
CAediting_442083	ENST00000521264.4	chr5_151745814_-	-1332.20	-1329.40	-1349.60
CAediting_442084	ENST00000521264.4	chr5_151745822_-	-1329.30	-1329.40	-1349.60
CAediting_442085	ENST00000521264.4	chr5_151745839_-	-1332.90	-1329.40	-1349.60
CAediting_442086	ENST00000521264.4	chr5_151745853_-	-1330.10	-1329.40	-1349.60
CAediting_442087	ENST00000521264.4	chr5_151745860_-	-1329.60	-1329.40	-1349.60
CAediting_442088	ENST00000521264.4	chr5_151745862_-	-1330.10	-1329.40	-1349.60
CAediting_442089	ENST00000521264.4	chr5_151745865_-	-1329.70	-1329.40	-1349.60
CAediting_442090	ENST00000521264.4	chr5_151745870_-	-1332.00	-1329.40	-1349.60
CAediting_442091	ENST00000521264.4	chr5_151745914_-	-1332.40	-1329.40	-1349.60
CAediting_442092	ENST00000521264.4	chr5_151745927_-	-1332.20	-1329.40	-1349.60
CAediting_442093	ENST00000521264.4	chr5_151745929_-	-1336.60	-1329.40	-1349.60

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Relation with ADAR for ATOX1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_442277	chr5_151770032_-	0.00849110920491406	0.21489763039195	.	.	.	.
LIHC	CAediting_442277	chr5_151770032_-	0.0013635606857926	0.323926654272791	.	.	.	.
THCA	CAediting_442277	chr5_151770032_-	0.0325157598844942	0.210863255582597	.	.	.	.
KIRC	CAediting_442277	chr5_151770032_-	0.000161034573959836	0.271114799331987	0.0153816470345225	0.176055592319374	.	.
OV	CAediting_442277	chr5_151770032_-	0.0191520279626635	0.197795496819926	.	.	.	.

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Relation with cancer stages for ATOX1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for ATOX1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BRCA	CAediting_442090	chr5_151745870_-	0.0153056987801917	0.0275734	0.000514264
BRCA	CAediting_442277	chr5_151770032_-	0.00134207440492329	0.0107364	5.58418e-05

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RelatedDrugs for ATOX1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
ATOX1	O00244	DB00515	Cisplatin	Copper transport protein ATOX1	SmallMoleculeDrug	approved
ATOX1	O00244	DB02772	Sucrose	Copper transport protein ATOX1	SmallMoleculeDrug	approved\|experimental\|investigational

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RelatedDiseases for ATOX1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
ATOX1	C0019189	Hepatitis, Chronic	1	CTD_human
ATOX1	C0020538	Hypertensive disease	1	CTD_human
ATOX1	C0024121	Lung Neoplasms	1	CTD_human
ATOX1	C0149519	Chronic Persistent Hepatitis	1	CTD_human
ATOX1	C0242379	Malignant neoplasm of lung	1	CTD_human
ATOX1	C0520463	Chronic active hepatitis	1	CTD_human
ATOX1	C0524611	Cryptogenic Chronic Hepatitis	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene