|
Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Editing gene: PPP1R12B (CAeditome ID:4660) |
Gene summary for PPP1R12B |
Gene summary |
Gene information | Gene symbol | PPP1R12B | Gene ID | 4660 |
Gene name | protein phosphatase 1 regulatory subunit 12B | |
Synonyms | MYPT2|PP1bp55 | |
Cytomap | 1q32.1 | |
Type of gene | protein-coding | |
Description | protein phosphatase 1 regulatory subunit 12Bmyosin phosphatase target subunit 2myosin phosphatase-targeting subunit 2protein phosphatase 1, regulatory (inhibitor) subunit 12B | |
Modification date | 20210518 | |
UniProtAcc | O60237 | |
Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for PPP1R12B |
RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
RNA editing frequencies across 33 cancers of gene: ENSG00000077157.19 |
RNA A-to-I editing events in Cancer. |
CAediting_131588(202350782, +), CAediting_131589(202352708, +), CAediting_131590(202352709, +), CAediting_131591(202352766, +), CAediting_131592(202352808, +), CAediting_131593(202365335, +), CAediting_131594(202365352, +), CAediting_131595(202365391, +), CAediting_131596(202365809, +), CAediting_131597(202365813, +), CAediting_131598(202365883, +), CAediting_131599(202366342, +), CAediting_131600(202368764, +), CAediting_131601(202368794, +), CAediting_131602(202368844, +), CAediting_131603(202368952, +), CAediting_131604(202372272, +), CAediting_131605(202372345, +), CAediting_131606(202372424, +), CAediting_131607(202372432, +), CAediting_131608(202372550, +), CAediting_131609(202372634, +), CAediting_131610(202375633, +), CAediting_131611(202375680, +), CAediting_131612(202375745, +), CAediting_131613(202375806, +), CAediting_131614(202382667, +), CAediting_131615(202382691, +), CAediting_131616(202382698, +), CAediting_131617(202382699, +), CAediting_131618(202382730, +), CAediting_131619(202382755, +), CAediting_131620(202383604, +), CAediting_131621(202388284, +), CAediting_131622(202388313, +), CAediting_131623(202389745, +), CAediting_131624(202389816, +), CAediting_131625(202389823, +), CAediting_131626(202390554, +), CAediting_131627(202391050, +), CAediting_131628(202393102, +), CAediting_131629(202393845, +), CAediting_131630(202394075, +), CAediting_131631(202394127, +), CAediting_131632(202394500, +), CAediting_131633(202394521, +), CAediting_131634(202394569, +), CAediting_131635(202394607, +), CAediting_131636(202394633, +), CAediting_131637(202394634, +), CAediting_131638(202394660, +), CAediting_131639(202394664, +), CAediting_131640(202394669, +), CAediting_131641(202394705, +), CAediting_131642(202394706, +), CAediting_131643(202394733, +), CAediting_131644(202394744, +), CAediting_131645(202394912, +), CAediting_131646(202394916, +), CAediting_131647(202394917, +), CAediting_131648(202394959, +), CAediting_131649(202394984, +), CAediting_131650(202394996, +), CAediting_131651(202394997, +), CAediting_131652(202395002, +), CAediting_131653(202395006, +), CAediting_131654(202395029, +), CAediting_131655(202395036, +), CAediting_131656(202395049, +), CAediting_131657(202395072, +), CAediting_131658(202397981, +), CAediting_131659(202397992, +), CAediting_131660(202404763, +), CAediting_131661(202421519, +), CAediting_131662(202421520, +), CAediting_131663(202421560, +), CAediting_131664(202421561, +), CAediting_131665(202454755, +), CAediting_131666(202456149, +), CAediting_131667(202456162, +), CAediting_131668(202457433, +), CAediting_131669(202470825, +), CAediting_131670(202474541, +), CAediting_131671(202486747, +), CAediting_131672(202487737, +), CAediting_131673(202488928, +), CAediting_131674(202488932, +), CAediting_131675(202489472, +), CAediting_131676(202489584, +), CAediting_131677(202489604, +), CAediting_131678(202489605, +), CAediting_131679(202491181, +), CAediting_131680(202494723, +), CAediting_131681(202504123, +), CAediting_131682(202504139, +), CAediting_131683(202504140, +), CAediting_131684(202504153, +), CAediting_131685(202504185, +), CAediting_131686(202504209, +), CAediting_131687(202504211, +), CAediting_131688(202504217, +), CAediting_131689(202504228, +), CAediting_131690(202504231, +), CAediting_131691(202504237, +), CAediting_131692(202504240, +), CAediting_131693(202504243, +), CAediting_131694(202504246, +), CAediting_131695(202504273, +), CAediting_131696(202511424, +), CAediting_131697(202511469, +), CAediting_131698(202524578, +), CAediting_131699(202537085, +), CAediting_131700(202537093, +), CAediting_131701(202537094, +), CAediting_131702(202537161, +), CAediting_131703(202537169, +), CAediting_131704(202537170, +), CAediting_131705(202537171, +), CAediting_131706(202537207, +), CAediting_131707(202537243, +), CAediting_131708(202537274, +), CAediting_131709(202537295, +), CAediting_131710(202538011, +), CAediting_131711(202538037, +), CAediting_131712(202538050, +), CAediting_131713(202538090, +), CAediting_131714(202538091, +), CAediting_131715(202538123, +), CAediting_131716(202538133, +), CAediting_131717(202538178, +), CAediting_131718(202538217, +), CAediting_131719(202543479, +), CAediting_131720(202543544, +), CAediting_131721(202543554, +), CAediting_131722(202543580, +), CAediting_131723(202543584, +), CAediting_131724(202543587, +), CAediting_131725(202543588, +), CAediting_131726(202543594, +), CAediting_131727(202543640, +), CAediting_131728(202543678, +), CAediting_131729(202546457, +), CAediting_131730(202546465, +), CAediting_131731(202546481, +), CAediting_131732(202546493, +), CAediting_131733(202546507, +), CAediting_131734(202546518, +), CAediting_131735(202546524, +), CAediting_131736(202546529, +), CAediting_131737(202546583, +), CAediting_131738(202546589, +), CAediting_131739(202548384, +), CAediting_131740(202548446, +), CAediting_131741(202548461, +), CAediting_131742(202548478, +), CAediting_131743(202548490, +), CAediting_131744(202548502, +), CAediting_131745(202548585, +), CAediting_131746(202548654, +), CAediting_131747(202548690, +), CAediting_131748(202548693, +), CAediting_131749(202548703, +), CAediting_131750(202548712, +), CAediting_131751(202548730, +), CAediting_131752(202549625, +), CAediting_131753(202549692, +), CAediting_131754(202549698, +), CAediting_131755(202557019, +), CAediting_131756(202563142, +), CAediting_131757(202563143, +), CAediting_131758(202563156, +), CAediting_131759(202563165, +), CAediting_131760(202563246, +), CAediting_131761(202563252, +), CAediting_131762(202563253, +), CAediting_131763(202563256, +), CAediting_131764(202563258, +), CAediting_131765(202563272, +), CAediting_131766(202563274, +), CAediting_131767(202563298, +), CAediting_131768(202563314, +), CAediting_131769(202563319, +), CAediting_131770(202563326, +), CAediting_131771(202563352, +), CAediting_131772(202563355, +), CAediting_131773(202563364, +), CAediting_131774(202563379, +), CAediting_131775(202563391, +), CAediting_131776(202563794, +), CAediting_131777(202563804, +), CAediting_131778(202563812, +), CAediting_131779(202563813, +), CAediting_131780(202563839, +), CAediting_131781(202563848, +), CAediting_131782(202563853, +), CAediting_131783(202563884, +), CAediting_131784(202563886, +), CAediting_131785(202563890, +), CAediting_131786(202563898, +), CAediting_131787(202563918, +), CAediting_131788(202563919, +), CAediting_131789(202563922, +), CAediting_131790(202563954, +), CAediting_131791(202563966, +), CAediting_131792(202564023, +), CAediting_131793(202564044, +), CAediting_131794(202571475, +), CAediting_131795(202571555, +), CAediting_131796(202571609, +), CAediting_131797(202574234, +), CAediting_131798(202574281, +), CAediting_131799(202574328, +), CAediting_131800(202574367, +), CAediting_131801(202582608, +), CAediting_131802(202582614, +), CAediting_131803(202582630, +), CAediting_131804(202582631, +), CAediting_131805(202582644, +), CAediting_131806(202582661, +), CAediting_131807(202582677, +), CAediting_131808(202582683, +), CAediting_131809(202582697, +), CAediting_131810(202582698, +), CAediting_131811(202582700, +), CAediting_131812(202582708, +), CAediting_131813(202582719, +), CAediting_131814(202582722, +), CAediting_131815(202582723, +), CAediting_131816(202582724, +), CAediting_131817(202582725, +), CAediting_131818(202582726, +), CAediting_131819(202582728, +), CAediting_131820(202582733, +), CAediting_131821(202582734, +), CAediting_131822(202582735, +), CAediting_131823(202582738, +), CAediting_131824(202582742, +), CAediting_131825(202582754, +), CAediting_131826(202582764, +), CAediting_131827(202582770, +), CAediting_131828(202582774, +), CAediting_131829(202582797, +), CAediting_131830(202582805, +), CAediting_131831(202582806, +), CAediting_131832(202582813, +), CAediting_131833(202582826, +), CAediting_131834(202582830, +), CAediting_131835(202582840, +), CAediting_131836(202582845, +), CAediting_131837(202582869, +), CAediting_131838(202582872, +), CAediting_131839(202582873, +), CAediting_131840(202584807, +), CAediting_131841(202585028, +), CAediting_131842(202585040, +), CAediting_131843(202585061, +), CAediting_131844(202585066, +), CAediting_131845(202585071, +), CAediting_131846(202585076, +), CAediting_131847(202585083, +), CAediting_131848(202585090, +), CAediting_131849(202585109, +), CAediting_131850(202585114, +), CAediting_131851(202585122, +), CAediting_131852(202585125, +), CAediting_131853(202585129, +), CAediting_131854(202585137, +), CAediting_131855(202585145, +), CAediting_131856(202585148, +), CAediting_131857(202585157, +), CAediting_131858(202585161, +), CAediting_131859(202585169, +), CAediting_131860(202585170, +), CAediting_131861(202585180, +), CAediting_131862(202585197, +), CAediting_131863(202585206, +), CAediting_131864(202585217, +), CAediting_131865(202585258, +), CAediting_131866(202585265, +), CAediting_131867(202585271, +), |
Top |
RNA editing positional annotations for PPP1R12B using Annovar |
Protein coding RNA editing(s). |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
CAeditome ID | Position | Variant type |
CAediting_131588 | chr1_202350782_+ | intronic |
CAediting_131589 | chr1_202352708_+ | intronic |
CAediting_131590 | chr1_202352709_+ | intronic |
CAediting_131591 | chr1_202352766_+ | intronic |
CAediting_131592 | chr1_202352808_+ | intronic |
CAediting_131593 | chr1_202365335_+ | intronic |
CAediting_131594 | chr1_202365352_+ | intronic |
CAediting_131595 | chr1_202365391_+ | intronic |
CAediting_131596 | chr1_202365809_+ | intronic |
CAediting_131597 | chr1_202365813_+ | intronic |
CAediting_131598 | chr1_202365883_+ | intronic |
CAediting_131599 | chr1_202366342_+ | intronic |
CAediting_131600 | chr1_202368764_+ | intronic |
CAediting_131601 | chr1_202368794_+ | intronic |
CAediting_131602 | chr1_202368844_+ | intronic |
CAediting_131603 | chr1_202368952_+ | intronic |
CAediting_131604 | chr1_202372272_+ | intronic |
CAediting_131605 | chr1_202372345_+ | intronic |
CAediting_131606 | chr1_202372424_+ | intronic |
CAediting_131607 | chr1_202372432_+ | intronic |
CAediting_131608 | chr1_202372550_+ | intronic |
CAediting_131609 | chr1_202372634_+ | intronic |
CAediting_131610 | chr1_202375633_+ | intronic |
CAediting_131611 | chr1_202375680_+ | intronic |
CAediting_131612 | chr1_202375745_+ | intronic |
CAediting_131613 | chr1_202375806_+ | intronic |
CAediting_131614 | chr1_202382667_+ | intronic |
CAediting_131615 | chr1_202382691_+ | intronic |
CAediting_131616 | chr1_202382698_+ | intronic |
CAediting_131617 | chr1_202382699_+ | intronic |
CAediting_131618 | chr1_202382730_+ | intronic |
CAediting_131619 | chr1_202382755_+ | intronic |
CAediting_131620 | chr1_202383604_+ | intronic |
CAediting_131621 | chr1_202388284_+ | intronic |
CAediting_131622 | chr1_202388313_+ | intronic |
CAediting_131623 | chr1_202389745_+ | intronic |
CAediting_131624 | chr1_202389816_+ | intronic |
CAediting_131625 | chr1_202389823_+ | intronic |
CAediting_131626 | chr1_202390554_+ | intronic |
CAediting_131627 | chr1_202391050_+ | intronic |
CAediting_131628 | chr1_202393102_+ | intronic |
CAediting_131629 | chr1_202393845_+ | intronic |
CAediting_131630 | chr1_202394075_+ | intronic |
CAediting_131631 | chr1_202394127_+ | intronic |
CAediting_131632 | chr1_202394500_+ | intronic |
CAediting_131633 | chr1_202394521_+ | intronic |
CAediting_131634 | chr1_202394569_+ | intronic |
CAediting_131635 | chr1_202394607_+ | intronic |
CAediting_131636 | chr1_202394633_+ | intronic |
CAediting_131637 | chr1_202394634_+ | intronic |
CAediting_131638 | chr1_202394660_+ | intronic |
CAediting_131639 | chr1_202394664_+ | intronic |
CAediting_131640 | chr1_202394669_+ | intronic |
CAediting_131641 | chr1_202394705_+ | intronic |
CAediting_131642 | chr1_202394706_+ | intronic |
CAediting_131643 | chr1_202394733_+ | intronic |
CAediting_131644 | chr1_202394744_+ | intronic |
CAediting_131645 | chr1_202394912_+ | intronic |
CAediting_131646 | chr1_202394916_+ | intronic |
CAediting_131647 | chr1_202394917_+ | intronic |
CAediting_131648 | chr1_202394959_+ | intronic |
CAediting_131649 | chr1_202394984_+ | intronic |
CAediting_131650 | chr1_202394996_+ | intronic |
CAediting_131651 | chr1_202394997_+ | intronic |
CAediting_131652 | chr1_202395002_+ | intronic |
CAediting_131653 | chr1_202395006_+ | intronic |
CAediting_131654 | chr1_202395029_+ | intronic |
CAediting_131655 | chr1_202395036_+ | intronic |
CAediting_131656 | chr1_202395049_+ | intronic |
CAediting_131657 | chr1_202395072_+ | intronic |
CAediting_131658 | chr1_202397981_+ | intronic |
CAediting_131659 | chr1_202397992_+ | intronic |
CAediting_131660 | chr1_202404763_+ | intronic |
CAediting_131661 | chr1_202421519_+ | intronic |
CAediting_131662 | chr1_202421520_+ | intronic |
CAediting_131663 | chr1_202421560_+ | intronic |
CAediting_131664 | chr1_202421561_+ | intronic |
CAediting_131665 | chr1_202454755_+ | ncRNA_intronic |
CAediting_131666 | chr1_202456149_+ | ncRNA_intronic |
CAediting_131667 | chr1_202456162_+ | ncRNA_intronic |
CAediting_131668 | chr1_202457433_+ | ncRNA_intronic |
CAediting_131669 | chr1_202470825_+ | ncRNA_intronic |
CAediting_131670 | chr1_202474541_+ | ncRNA_intronic |
CAediting_131671 | chr1_202486747_+ | ncRNA_intronic |
CAediting_131672 | chr1_202487737_+ | ncRNA_intronic |
CAediting_131673 | chr1_202488928_+ | ncRNA_intronic |
CAediting_131674 | chr1_202488932_+ | ncRNA_intronic |
CAediting_131675 | chr1_202489472_+ | ncRNA_intronic |
CAediting_131676 | chr1_202489584_+ | ncRNA_intronic |
CAediting_131677 | chr1_202489604_+ | ncRNA_intronic |
CAediting_131678 | chr1_202489605_+ | ncRNA_intronic |
CAediting_131679 | chr1_202491181_+ | ncRNA_intronic |
CAediting_131680 | chr1_202494723_+ | ncRNA_intronic |
CAediting_131681 | chr1_202504123_+ | ncRNA_intronic |
CAediting_131682 | chr1_202504139_+ | ncRNA_intronic |
CAediting_131683 | chr1_202504140_+ | ncRNA_intronic |
CAediting_131684 | chr1_202504153_+ | ncRNA_intronic |
CAediting_131685 | chr1_202504185_+ | ncRNA_intronic |
CAediting_131686 | chr1_202504209_+ | ncRNA_intronic |
CAediting_131687 | chr1_202504211_+ | ncRNA_intronic |
CAediting_131688 | chr1_202504217_+ | ncRNA_intronic |
CAediting_131689 | chr1_202504228_+ | ncRNA_intronic |
CAediting_131690 | chr1_202504231_+ | ncRNA_intronic |
CAediting_131691 | chr1_202504237_+ | ncRNA_intronic |
CAediting_131692 | chr1_202504240_+ | ncRNA_intronic |
CAediting_131693 | chr1_202504243_+ | ncRNA_intronic |
CAediting_131694 | chr1_202504246_+ | ncRNA_intronic |
CAediting_131695 | chr1_202504273_+ | ncRNA_intronic |
CAediting_131696 | chr1_202511424_+ | ncRNA_intronic |
CAediting_131697 | chr1_202511469_+ | ncRNA_intronic |
CAediting_131698 | chr1_202524578_+ | ncRNA_intronic |
CAediting_131699 | chr1_202537085_+ | ncRNA_intronic |
CAediting_131700 | chr1_202537093_+ | ncRNA_intronic |
CAediting_131701 | chr1_202537094_+ | ncRNA_intronic |
CAediting_131702 | chr1_202537161_+ | ncRNA_intronic |
CAediting_131703 | chr1_202537169_+ | ncRNA_intronic |
CAediting_131704 | chr1_202537170_+ | ncRNA_intronic |
CAediting_131705 | chr1_202537171_+ | ncRNA_intronic |
CAediting_131706 | chr1_202537207_+ | ncRNA_intronic |
CAediting_131707 | chr1_202537243_+ | ncRNA_intronic |
CAediting_131708 | chr1_202537274_+ | ncRNA_intronic |
CAediting_131709 | chr1_202537295_+ | ncRNA_intronic |
CAediting_131710 | chr1_202538011_+ | ncRNA_intronic |
CAediting_131711 | chr1_202538037_+ | ncRNA_intronic |
CAediting_131712 | chr1_202538050_+ | ncRNA_intronic |
CAediting_131713 | chr1_202538090_+ | ncRNA_intronic |
CAediting_131714 | chr1_202538091_+ | ncRNA_intronic |
CAediting_131715 | chr1_202538123_+ | ncRNA_intronic |
CAediting_131716 | chr1_202538133_+ | ncRNA_intronic |
CAediting_131717 | chr1_202538178_+ | ncRNA_intronic |
CAediting_131718 | chr1_202538217_+ | ncRNA_intronic |
CAediting_131719 | chr1_202543479_+ | ncRNA_intronic |
CAediting_131720 | chr1_202543544_+ | ncRNA_intronic |
CAediting_131721 | chr1_202543554_+ | ncRNA_intronic |
CAediting_131722 | chr1_202543580_+ | ncRNA_intronic |
CAediting_131723 | chr1_202543584_+ | ncRNA_intronic |
CAediting_131724 | chr1_202543587_+ | ncRNA_intronic |
CAediting_131725 | chr1_202543588_+ | ncRNA_intronic |
CAediting_131726 | chr1_202543594_+ | ncRNA_intronic |
CAediting_131727 | chr1_202543640_+ | ncRNA_intronic |
CAediting_131728 | chr1_202543678_+ | ncRNA_intronic |
CAediting_131729 | chr1_202546457_+ | ncRNA_intronic |
CAediting_131730 | chr1_202546465_+ | ncRNA_intronic |
CAediting_131731 | chr1_202546481_+ | ncRNA_intronic |
CAediting_131732 | chr1_202546493_+ | ncRNA_intronic |
CAediting_131733 | chr1_202546507_+ | ncRNA_intronic |
CAediting_131734 | chr1_202546518_+ | ncRNA_intronic |
CAediting_131735 | chr1_202546524_+ | ncRNA_intronic |
CAediting_131736 | chr1_202546529_+ | ncRNA_intronic |
CAediting_131737 | chr1_202546583_+ | ncRNA_intronic |
CAediting_131738 | chr1_202546589_+ | ncRNA_intronic |
CAediting_131739 | chr1_202548384_+ | ncRNA_intronic |
CAediting_131740 | chr1_202548446_+ | ncRNA_intronic |
CAediting_131741 | chr1_202548461_+ | ncRNA_intronic |
CAediting_131742 | chr1_202548478_+ | ncRNA_intronic |
CAediting_131743 | chr1_202548490_+ | ncRNA_intronic |
CAediting_131744 | chr1_202548502_+ | ncRNA_intronic |
CAediting_131745 | chr1_202548585_+ | ncRNA_intronic |
CAediting_131746 | chr1_202548654_+ | ncRNA_intronic |
CAediting_131747 | chr1_202548690_+ | ncRNA_intronic |
CAediting_131748 | chr1_202548693_+ | ncRNA_intronic |
CAediting_131749 | chr1_202548703_+ | ncRNA_intronic |
CAediting_131750 | chr1_202548712_+ | ncRNA_intronic |
CAediting_131751 | chr1_202548730_+ | ncRNA_intronic |
CAediting_131752 | chr1_202549625_+ | ncRNA_intronic |
CAediting_131753 | chr1_202549692_+ | ncRNA_intronic |
CAediting_131754 | chr1_202549698_+ | ncRNA_intronic |
CAediting_131755 | chr1_202557019_+ | ncRNA_intronic |
CAediting_131756 | chr1_202563142_+ | ncRNA_intronic |
CAediting_131757 | chr1_202563143_+ | ncRNA_intronic |
CAediting_131758 | chr1_202563156_+ | ncRNA_intronic |
CAediting_131759 | chr1_202563165_+ | ncRNA_intronic |
CAediting_131760 | chr1_202563246_+ | ncRNA_intronic |
CAediting_131761 | chr1_202563252_+ | ncRNA_intronic |
CAediting_131762 | chr1_202563253_+ | ncRNA_intronic |
CAediting_131763 | chr1_202563256_+ | ncRNA_intronic |
CAediting_131764 | chr1_202563258_+ | ncRNA_intronic |
CAediting_131765 | chr1_202563272_+ | ncRNA_intronic |
CAediting_131766 | chr1_202563274_+ | ncRNA_intronic |
CAediting_131767 | chr1_202563298_+ | ncRNA_intronic |
CAediting_131768 | chr1_202563314_+ | ncRNA_intronic |
CAediting_131769 | chr1_202563319_+ | ncRNA_intronic |
CAediting_131770 | chr1_202563326_+ | ncRNA_intronic |
CAediting_131771 | chr1_202563352_+ | ncRNA_intronic |
CAediting_131772 | chr1_202563355_+ | ncRNA_intronic |
CAediting_131773 | chr1_202563364_+ | ncRNA_intronic |
CAediting_131774 | chr1_202563379_+ | ncRNA_intronic |
CAediting_131775 | chr1_202563391_+ | ncRNA_intronic |
CAediting_131776 | chr1_202563794_+ | ncRNA_intronic |
CAediting_131777 | chr1_202563804_+ | ncRNA_intronic |
CAediting_131778 | chr1_202563812_+ | ncRNA_intronic |
CAediting_131779 | chr1_202563813_+ | ncRNA_intronic |
CAediting_131780 | chr1_202563839_+ | ncRNA_intronic |
CAediting_131781 | chr1_202563848_+ | ncRNA_intronic |
CAediting_131782 | chr1_202563853_+ | ncRNA_intronic |
CAediting_131783 | chr1_202563884_+ | ncRNA_intronic |
CAediting_131784 | chr1_202563886_+ | ncRNA_intronic |
CAediting_131785 | chr1_202563890_+ | ncRNA_intronic |
CAediting_131786 | chr1_202563898_+ | ncRNA_intronic |
CAediting_131787 | chr1_202563918_+ | ncRNA_intronic |
CAediting_131788 | chr1_202563919_+ | ncRNA_intronic |
CAediting_131789 | chr1_202563922_+ | ncRNA_intronic |
CAediting_131790 | chr1_202563954_+ | ncRNA_intronic |
CAediting_131791 | chr1_202563966_+ | ncRNA_intronic |
CAediting_131792 | chr1_202564023_+ | ncRNA_intronic |
CAediting_131793 | chr1_202564044_+ | ncRNA_intronic |
CAediting_131794 | chr1_202571475_+ | ncRNA_intronic |
CAediting_131795 | chr1_202571555_+ | ncRNA_intronic |
CAediting_131796 | chr1_202571609_+ | ncRNA_intronic |
CAediting_131797 | chr1_202574234_+ | ncRNA_intronic |
CAediting_131798 | chr1_202574281_+ | ncRNA_intronic |
CAediting_131799 | chr1_202574328_+ | ncRNA_intronic |
CAediting_131800 | chr1_202574367_+ | ncRNA_intronic |
CAediting_131801 | chr1_202582608_+ | UTR3 |
CAediting_131802 | chr1_202582614_+ | UTR3 |
CAediting_131803 | chr1_202582630_+ | UTR3 |
CAediting_131804 | chr1_202582631_+ | UTR3 |
CAediting_131805 | chr1_202582644_+ | UTR3 |
CAediting_131806 | chr1_202582661_+ | UTR3 |
CAediting_131807 | chr1_202582677_+ | UTR3 |
CAediting_131808 | chr1_202582683_+ | UTR3 |
CAediting_131809 | chr1_202582697_+ | UTR3 |
CAediting_131810 | chr1_202582698_+ | UTR3 |
CAediting_131811 | chr1_202582700_+ | UTR3 |
CAediting_131812 | chr1_202582708_+ | UTR3 |
CAediting_131813 | chr1_202582719_+ | UTR3 |
CAediting_131814 | chr1_202582722_+ | UTR3 |
CAediting_131815 | chr1_202582723_+ | UTR3 |
CAediting_131816 | chr1_202582724_+ | UTR3 |
CAediting_131817 | chr1_202582725_+ | UTR3 |
CAediting_131818 | chr1_202582726_+ | UTR3 |
CAediting_131819 | chr1_202582728_+ | UTR3 |
CAediting_131820 | chr1_202582733_+ | UTR3 |
CAediting_131821 | chr1_202582734_+ | UTR3 |
CAediting_131822 | chr1_202582735_+ | UTR3 |
CAediting_131823 | chr1_202582738_+ | UTR3 |
CAediting_131824 | chr1_202582742_+ | UTR3 |
CAediting_131825 | chr1_202582754_+ | UTR3 |
CAediting_131826 | chr1_202582764_+ | UTR3 |
CAediting_131827 | chr1_202582770_+ | UTR3 |
CAediting_131828 | chr1_202582774_+ | UTR3 |
CAediting_131829 | chr1_202582797_+ | UTR3 |
CAediting_131830 | chr1_202582805_+ | UTR3 |
CAediting_131831 | chr1_202582806_+ | UTR3 |
CAediting_131832 | chr1_202582813_+ | UTR3 |
CAediting_131833 | chr1_202582826_+ | UTR3 |
CAediting_131834 | chr1_202582830_+ | UTR3 |
CAediting_131835 | chr1_202582840_+ | UTR3 |
CAediting_131836 | chr1_202582845_+ | UTR3 |
CAediting_131837 | chr1_202582869_+ | UTR3 |
CAediting_131838 | chr1_202582872_+ | UTR3 |
CAediting_131839 | chr1_202582873_+ | UTR3 |
CAediting_131840 | chr1_202584807_+ | UTR3 |
CAediting_131841 | chr1_202585028_+ | UTR3 |
CAediting_131842 | chr1_202585040_+ | UTR3 |
CAediting_131843 | chr1_202585061_+ | UTR3 |
CAediting_131844 | chr1_202585066_+ | UTR3 |
CAediting_131845 | chr1_202585071_+ | UTR3 |
CAediting_131846 | chr1_202585076_+ | UTR3 |
CAediting_131847 | chr1_202585083_+ | UTR3 |
CAediting_131848 | chr1_202585090_+ | UTR3 |
CAediting_131849 | chr1_202585109_+ | UTR3 |
CAediting_131850 | chr1_202585114_+ | UTR3 |
CAediting_131851 | chr1_202585122_+ | UTR3 |
CAediting_131852 | chr1_202585125_+ | UTR3 |
CAediting_131853 | chr1_202585129_+ | UTR3 |
CAediting_131854 | chr1_202585137_+ | UTR3 |
CAediting_131855 | chr1_202585145_+ | UTR3 |
CAediting_131856 | chr1_202585148_+ | UTR3 |
CAediting_131857 | chr1_202585157_+ | UTR3 |
CAediting_131858 | chr1_202585161_+ | UTR3 |
CAediting_131859 | chr1_202585169_+ | UTR3 |
CAediting_131860 | chr1_202585170_+ | UTR3 |
CAediting_131861 | chr1_202585180_+ | UTR3 |
CAediting_131862 | chr1_202585197_+ | UTR3 |
CAediting_131863 | chr1_202585206_+ | UTR3 |
CAediting_131864 | chr1_202585217_+ | UTR3 |
CAediting_131865 | chr1_202585258_+ | UTR3 |
CAediting_131866 | chr1_202585265_+ | UTR3 |
CAediting_131867 | chr1_202585271_+ | UTR3 |
Repat-regional RNA editing(s). |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_131588 | chr1_202350782_+ | SINE | Alu | AluSx1 |
CAediting_131589 | chr1_202352708_+ | SINE | Alu | AluSg |
CAediting_131590 | chr1_202352709_+ | SINE | Alu | AluSg |
CAediting_131591 | chr1_202352766_+ | SINE | Alu | AluSg |
CAediting_131592 | chr1_202352808_+ | SINE | Alu | AluSg |
CAediting_131593 | chr1_202365335_+ | SINE | Alu | AluJb |
CAediting_131594 | chr1_202365352_+ | SINE | Alu | AluJb |
CAediting_131595 | chr1_202365391_+ | SINE | Alu | AluJb |
CAediting_131596 | chr1_202365809_+ | SINE | Alu | AluJo |
CAediting_131597 | chr1_202365813_+ | SINE | Alu | AluJo |
CAediting_131598 | chr1_202365883_+ | SINE | Alu | AluJo |
CAediting_131599 | chr1_202366342_+ | SINE | Alu | AluSz |
CAediting_131600 | chr1_202368764_+ | SINE | Alu | AluJr4 |
CAediting_131601 | chr1_202368794_+ | SINE | Alu | AluJr4 |
CAediting_131602 | chr1_202368844_+ | SINE | Alu | AluJr4 |
CAediting_131603 | chr1_202368952_+ | SINE | Alu | AluJr4 |
CAediting_131604 | chr1_202372272_+ | SINE | Alu | AluJo |
CAediting_131605 | chr1_202372345_+ | SINE | Alu | AluJo |
CAediting_131606 | chr1_202372424_+ | SINE | Alu | AluJo |
CAediting_131607 | chr1_202372432_+ | SINE | Alu | AluJo |
CAediting_131608 | chr1_202372550_+ | SINE | Alu | AluJo |
CAediting_131609 | chr1_202372634_+ | SINE | Alu | AluJo |
CAediting_131610 | chr1_202375633_+ | SINE | Alu | AluJr4 |
CAediting_131611 | chr1_202375680_+ | SINE | Alu | AluJr4 |
CAediting_131612 | chr1_202375745_+ | SINE | Alu | AluJr4 |
CAediting_131613 | chr1_202375806_+ | SINE | Alu | AluJr4 |
CAediting_131614 | chr1_202382667_+ | SINE | Alu | AluSz6 |
CAediting_131615 | chr1_202382691_+ | SINE | Alu | AluSz6 |
CAediting_131616 | chr1_202382698_+ | SINE | Alu | AluSz6 |
CAediting_131617 | chr1_202382699_+ | SINE | Alu | AluSz6 |
CAediting_131618 | chr1_202382730_+ | SINE | Alu | AluSz6 |
CAediting_131619 | chr1_202382755_+ | SINE | Alu | AluSz6 |
CAediting_131620 | chr1_202383604_+ | SINE | Alu | AluSz6 |
CAediting_131621 | chr1_202388284_+ | SINE | Alu | AluSz |
CAediting_131622 | chr1_202388313_+ | SINE | Alu | AluSz |
CAediting_131623 | chr1_202389745_+ | SINE | Alu | AluSx3 |
CAediting_131624 | chr1_202389816_+ | SINE | Alu | AluSx3 |
CAediting_131625 | chr1_202389823_+ | SINE | Alu | AluSx3 |
CAediting_131626 | chr1_202390554_+ | SINE | Alu | AluJr4 |
CAediting_131627 | chr1_202391050_+ | SINE | Alu | AluJr |
CAediting_131628 | chr1_202393102_+ | SINE | Alu | AluSz6 |
CAediting_131629 | chr1_202393845_+ | SINE | Alu | AluJr |
CAediting_131630 | chr1_202394075_+ | SINE | Alu | AluSc8 |
CAediting_131631 | chr1_202394127_+ | SINE | Alu | AluSc8 |
CAediting_131632 | chr1_202394500_+ | SINE | Alu | AluSp |
CAediting_131633 | chr1_202394521_+ | SINE | Alu | AluSp |
CAediting_131634 | chr1_202394569_+ | SINE | Alu | AluSp |
CAediting_131635 | chr1_202394607_+ | SINE | Alu | AluSp |
CAediting_131636 | chr1_202394633_+ | SINE | Alu | AluSp |
CAediting_131637 | chr1_202394634_+ | SINE | Alu | AluSp |
CAediting_131638 | chr1_202394660_+ | SINE | Alu | AluSp |
CAediting_131639 | chr1_202394664_+ | SINE | Alu | AluSp |
CAediting_131640 | chr1_202394669_+ | SINE | Alu | AluSp |
CAediting_131641 | chr1_202394705_+ | SINE | Alu | AluSp |
CAediting_131642 | chr1_202394706_+ | SINE | Alu | AluSp |
CAediting_131643 | chr1_202394733_+ | SINE | Alu | AluSp |
CAediting_131644 | chr1_202394744_+ | SINE | Alu | AluSp |
CAediting_131645 | chr1_202394912_+ | SINE | Alu | AluSx1 |
CAediting_131646 | chr1_202394916_+ | SINE | Alu | AluSx1 |
CAediting_131647 | chr1_202394917_+ | SINE | Alu | AluSx1 |
CAediting_131648 | chr1_202394959_+ | SINE | Alu | AluSx1 |
CAediting_131649 | chr1_202394984_+ | SINE | Alu | AluSx1 |
CAediting_131650 | chr1_202394996_+ | SINE | Alu | AluSx1 |
CAediting_131651 | chr1_202394997_+ | SINE | Alu | AluSx1 |
CAediting_131652 | chr1_202395002_+ | SINE | Alu | AluSx1 |
CAediting_131653 | chr1_202395006_+ | SINE | Alu | AluSx1 |
CAediting_131654 | chr1_202395029_+ | SINE | Alu | AluSx1 |
CAediting_131655 | chr1_202395036_+ | SINE | Alu | AluSx1 |
CAediting_131656 | chr1_202395049_+ | SINE | Alu | AluSx1 |
CAediting_131657 | chr1_202395072_+ | SINE | Alu | AluSx1 |
CAediting_131658 | chr1_202397981_+ | SINE | Alu | AluSx3 |
CAediting_131659 | chr1_202397992_+ | SINE | Alu | AluSx3 |
CAediting_131660 | chr1_202404763_+ | SINE | Alu | AluSc8 |
CAediting_131661 | chr1_202421519_+ | SINE | Alu | AluSz6 |
CAediting_131662 | chr1_202421520_+ | SINE | Alu | AluSz6 |
CAediting_131663 | chr1_202421560_+ | SINE | Alu | AluSz6 |
CAediting_131664 | chr1_202421561_+ | SINE | Alu | AluSz6 |
CAediting_131665 | chr1_202454755_+ | SINE | Alu | AluJr |
CAediting_131666 | chr1_202456149_+ | SINE | Alu | AluSz |
CAediting_131667 | chr1_202456162_+ | SINE | Alu | AluSz |
CAediting_131668 | chr1_202457433_+ | SINE | Alu | AluSz |
CAediting_131669 | chr1_202470825_+ | SINE | Alu | AluJr |
CAediting_131670 | chr1_202474541_+ | SINE | Alu | AluSz6 |
CAediting_131671 | chr1_202486747_+ | SINE | Alu | AluJo |
CAediting_131672 | chr1_202487737_+ | SINE | Alu | AluSq2 |
CAediting_131673 | chr1_202488928_+ | SINE | Alu | AluSz |
CAediting_131674 | chr1_202488932_+ | SINE | Alu | AluSz |
CAediting_131675 | chr1_202489472_+ | LINE | L1 | L1MB7 |
CAediting_131676 | chr1_202489584_+ | LINE | L1 | L1MB7 |
CAediting_131677 | chr1_202489604_+ | LINE | L1 | L1MB7 |
CAediting_131678 | chr1_202489605_+ | LINE | L1 | L1MB7 |
CAediting_131679 | chr1_202491181_+ | SINE | Alu | AluSq2 |
CAediting_131680 | chr1_202494723_+ | SINE | Alu | AluSg7 |
CAediting_131681 | chr1_202504123_+ | SINE | Alu | AluSz |
CAediting_131682 | chr1_202504139_+ | SINE | Alu | AluSz |
CAediting_131683 | chr1_202504140_+ | SINE | Alu | AluSz |
CAediting_131684 | chr1_202504153_+ | SINE | Alu | AluSz |
CAediting_131685 | chr1_202504185_+ | SINE | Alu | AluSz |
CAediting_131686 | chr1_202504209_+ | SINE | Alu | AluSz |
CAediting_131687 | chr1_202504211_+ | SINE | Alu | AluSz |
CAediting_131688 | chr1_202504217_+ | SINE | Alu | AluSz |
CAediting_131689 | chr1_202504228_+ | SINE | Alu | AluSz |
CAediting_131690 | chr1_202504231_+ | SINE | Alu | AluSz |
CAediting_131691 | chr1_202504237_+ | SINE | Alu | AluSz |
CAediting_131692 | chr1_202504240_+ | SINE | Alu | AluSz |
CAediting_131693 | chr1_202504243_+ | SINE | Alu | AluSz |
CAediting_131694 | chr1_202504246_+ | SINE | Alu | AluSz |
CAediting_131695 | chr1_202504273_+ | SINE | Alu | AluSz |
CAediting_131696 | chr1_202511424_+ | SINE | Alu | AluSg4 |
CAediting_131697 | chr1_202511469_+ | SINE | Alu | AluSg4 |
CAediting_131698 | chr1_202524578_+ | LINE | L1 | L1PB1 |
CAediting_131699 | chr1_202537085_+ | SINE | Alu | AluY |
CAediting_131700 | chr1_202537093_+ | SINE | Alu | AluY |
CAediting_131701 | chr1_202537094_+ | SINE | Alu | AluY |
CAediting_131702 | chr1_202537161_+ | SINE | Alu | AluY |
CAediting_131703 | chr1_202537169_+ | SINE | Alu | AluY |
CAediting_131704 | chr1_202537170_+ | SINE | Alu | AluY |
CAediting_131705 | chr1_202537171_+ | SINE | Alu | AluY |
CAediting_131706 | chr1_202537207_+ | SINE | Alu | AluY |
CAediting_131707 | chr1_202537243_+ | SINE | Alu | AluY |
CAediting_131708 | chr1_202537274_+ | SINE | Alu | AluY |
CAediting_131709 | chr1_202537295_+ | SINE | Alu | AluY |
CAediting_131710 | chr1_202538011_+ | SINE | Alu | AluSq2 |
CAediting_131711 | chr1_202538037_+ | SINE | Alu | AluSq2 |
CAediting_131712 | chr1_202538050_+ | SINE | Alu | AluSq2 |
CAediting_131713 | chr1_202538090_+ | SINE | Alu | AluSq2 |
CAediting_131714 | chr1_202538091_+ | SINE | Alu | AluSq2 |
CAediting_131715 | chr1_202538123_+ | SINE | Alu | AluSq2 |
CAediting_131716 | chr1_202538133_+ | SINE | Alu | AluSq2 |
CAediting_131717 | chr1_202538178_+ | SINE | Alu | AluSq2 |
CAediting_131718 | chr1_202538217_+ | SINE | Alu | AluSq2 |
CAediting_131719 | chr1_202543479_+ | SINE | Alu | AluSq4 |
CAediting_131720 | chr1_202543544_+ | SINE | Alu | AluSq4 |
CAediting_131721 | chr1_202543554_+ | SINE | Alu | AluSq4 |
CAediting_131722 | chr1_202543580_+ | SINE | Alu | AluSq4 |
CAediting_131723 | chr1_202543584_+ | SINE | Alu | AluSq4 |
CAediting_131724 | chr1_202543587_+ | SINE | Alu | AluSq4 |
CAediting_131725 | chr1_202543588_+ | SINE | Alu | AluSq4 |
CAediting_131726 | chr1_202543594_+ | SINE | Alu | AluSq4 |
CAediting_131727 | chr1_202543640_+ | SINE | Alu | AluSq4 |
CAediting_131728 | chr1_202543678_+ | SINE | Alu | AluSq4 |
CAediting_131729 | chr1_202546457_+ | SINE | Alu | AluJr4 |
CAediting_131730 | chr1_202546465_+ | SINE | Alu | AluJr4 |
CAediting_131731 | chr1_202546481_+ | SINE | Alu | AluJr4 |
CAediting_131732 | chr1_202546493_+ | SINE | Alu | AluJr4 |
CAediting_131733 | chr1_202546507_+ | SINE | Alu | AluJr4 |
CAediting_131734 | chr1_202546518_+ | SINE | Alu | AluJr4 |
CAediting_131735 | chr1_202546524_+ | SINE | Alu | AluJr4 |
CAediting_131736 | chr1_202546529_+ | SINE | Alu | AluJr4 |
CAediting_131737 | chr1_202546583_+ | SINE | Alu | AluJr4 |
CAediting_131738 | chr1_202546589_+ | SINE | Alu | AluJr4 |
CAediting_131739 | chr1_202548384_+ | SINE | Alu | AluJr |
CAediting_131740 | chr1_202548446_+ | SINE | Alu | AluJr |
CAediting_131741 | chr1_202548461_+ | SINE | Alu | AluJr |
CAediting_131742 | chr1_202548478_+ | SINE | Alu | AluJr |
CAediting_131743 | chr1_202548490_+ | SINE | Alu | AluJr |
CAediting_131744 | chr1_202548502_+ | SINE | Alu | AluJr |
CAediting_131745 | chr1_202548585_+ | SINE | Alu | AluJr |
CAediting_131747 | chr1_202548690_+ | SINE | Alu | AluJb |
CAediting_131748 | chr1_202548693_+ | SINE | Alu | AluJb |
CAediting_131749 | chr1_202548703_+ | SINE | Alu | AluJb |
CAediting_131750 | chr1_202548712_+ | SINE | Alu | AluJb |
CAediting_131751 | chr1_202548730_+ | SINE | Alu | AluJb |
CAediting_131752 | chr1_202549625_+ | SINE | Alu | AluY |
CAediting_131753 | chr1_202549692_+ | SINE | Alu | AluY |
CAediting_131754 | chr1_202549698_+ | SINE | Alu | AluY |
CAediting_131755 | chr1_202557019_+ | SINE | Alu | AluJb |
CAediting_131756 | chr1_202563142_+ | SINE | Alu | AluJr |
CAediting_131757 | chr1_202563143_+ | SINE | Alu | AluJr |
CAediting_131758 | chr1_202563156_+ | SINE | Alu | AluJr |
CAediting_131759 | chr1_202563165_+ | SINE | Alu | AluJr |
CAediting_131760 | chr1_202563246_+ | SINE | Alu | AluJr |
CAediting_131761 | chr1_202563252_+ | SINE | Alu | AluJr |
CAediting_131762 | chr1_202563253_+ | SINE | Alu | AluJr |
CAediting_131763 | chr1_202563256_+ | SINE | Alu | AluJr |
CAediting_131764 | chr1_202563258_+ | SINE | Alu | AluJr |
CAediting_131765 | chr1_202563272_+ | SINE | Alu | AluJr |
CAediting_131766 | chr1_202563274_+ | SINE | Alu | AluJr |
CAediting_131767 | chr1_202563298_+ | SINE | Alu | AluJr |
CAediting_131768 | chr1_202563314_+ | SINE | Alu | AluJr |
CAediting_131769 | chr1_202563319_+ | SINE | Alu | AluJr |
CAediting_131770 | chr1_202563326_+ | SINE | Alu | AluJr |
CAediting_131771 | chr1_202563352_+ | SINE | Alu | AluJr |
CAediting_131772 | chr1_202563355_+ | SINE | Alu | AluJr |
CAediting_131773 | chr1_202563364_+ | SINE | Alu | AluJr |
CAediting_131774 | chr1_202563379_+ | SINE | Alu | AluJr |
CAediting_131775 | chr1_202563391_+ | SINE | Alu | AluJr |
CAediting_131776 | chr1_202563794_+ | SINE | Alu | AluJb |
CAediting_131777 | chr1_202563804_+ | SINE | Alu | AluJb |
CAediting_131778 | chr1_202563812_+ | SINE | Alu | AluJb |
CAediting_131779 | chr1_202563813_+ | SINE | Alu | AluJb |
CAediting_131780 | chr1_202563839_+ | SINE | Alu | AluJb |
CAediting_131781 | chr1_202563848_+ | SINE | Alu | AluJb |
CAediting_131782 | chr1_202563853_+ | SINE | Alu | AluJb |
CAediting_131783 | chr1_202563884_+ | SINE | Alu | AluJb |
CAediting_131784 | chr1_202563886_+ | SINE | Alu | AluJb |
CAediting_131785 | chr1_202563890_+ | SINE | Alu | AluJb |
CAediting_131786 | chr1_202563898_+ | SINE | Alu | AluJb |
CAediting_131787 | chr1_202563918_+ | SINE | Alu | AluJb |
CAediting_131788 | chr1_202563919_+ | SINE | Alu | AluJb |
CAediting_131789 | chr1_202563922_+ | SINE | Alu | AluJb |
CAediting_131790 | chr1_202563954_+ | SINE | Alu | AluJb |
CAediting_131791 | chr1_202563966_+ | SINE | Alu | AluJb |
CAediting_131792 | chr1_202564023_+ | SINE | Alu | AluJb |
CAediting_131793 | chr1_202564044_+ | SINE | Alu | AluJb |
CAediting_131794 | chr1_202571475_+ | SINE | Alu | AluSx |
CAediting_131795 | chr1_202571555_+ | SINE | Alu | AluSx |
CAediting_131796 | chr1_202571609_+ | SINE | Alu | AluSx |
CAediting_131797 | chr1_202574234_+ | SINE | Alu | AluJb |
CAediting_131798 | chr1_202574281_+ | SINE | Alu | AluJb |
CAediting_131799 | chr1_202574328_+ | SINE | Alu | AluJb |
CAediting_131800 | chr1_202574367_+ | SINE | Alu | AluJb |
CAediting_131801 | chr1_202582608_+ | SINE | Alu | AluY |
CAediting_131802 | chr1_202582614_+ | SINE | Alu | AluY |
CAediting_131803 | chr1_202582630_+ | SINE | Alu | AluY |
CAediting_131804 | chr1_202582631_+ | SINE | Alu | AluY |
CAediting_131805 | chr1_202582644_+ | SINE | Alu | AluY |
CAediting_131806 | chr1_202582661_+ | SINE | Alu | AluY |
CAediting_131807 | chr1_202582677_+ | SINE | Alu | AluY |
CAediting_131808 | chr1_202582683_+ | SINE | Alu | AluY |
CAediting_131809 | chr1_202582697_+ | SINE | Alu | AluY |
CAediting_131810 | chr1_202582698_+ | SINE | Alu | AluY |
CAediting_131811 | chr1_202582700_+ | SINE | Alu | AluY |
CAediting_131812 | chr1_202582708_+ | SINE | Alu | AluY |
CAediting_131813 | chr1_202582719_+ | SINE | Alu | AluY |
CAediting_131814 | chr1_202582722_+ | SINE | Alu | AluY |
CAediting_131815 | chr1_202582723_+ | SINE | Alu | AluY |
CAediting_131816 | chr1_202582724_+ | SINE | Alu | AluY |
CAediting_131817 | chr1_202582725_+ | SINE | Alu | AluY |
CAediting_131818 | chr1_202582726_+ | SINE | Alu | AluY |
CAediting_131819 | chr1_202582728_+ | SINE | Alu | AluY |
CAediting_131820 | chr1_202582733_+ | SINE | Alu | AluY |
CAediting_131821 | chr1_202582734_+ | SINE | Alu | AluY |
CAediting_131822 | chr1_202582735_+ | SINE | Alu | AluY |
CAediting_131823 | chr1_202582738_+ | SINE | Alu | AluY |
CAediting_131824 | chr1_202582742_+ | SINE | Alu | AluY |
CAediting_131825 | chr1_202582754_+ | SINE | Alu | AluY |
CAediting_131826 | chr1_202582764_+ | SINE | Alu | AluY |
CAediting_131827 | chr1_202582770_+ | SINE | Alu | AluY |
CAediting_131828 | chr1_202582774_+ | SINE | Alu | AluY |
CAediting_131829 | chr1_202582797_+ | SINE | Alu | AluY |
CAediting_131830 | chr1_202582805_+ | SINE | Alu | AluY |
CAediting_131831 | chr1_202582806_+ | SINE | Alu | AluY |
CAediting_131832 | chr1_202582813_+ | SINE | Alu | AluY |
CAediting_131833 | chr1_202582826_+ | SINE | Alu | AluY |
CAediting_131834 | chr1_202582830_+ | SINE | Alu | AluY |
CAediting_131835 | chr1_202582840_+ | SINE | Alu | AluY |
CAediting_131836 | chr1_202582845_+ | SINE | Alu | AluY |
CAediting_131837 | chr1_202582869_+ | SINE | Alu | AluY |
CAediting_131838 | chr1_202582872_+ | SINE | Alu | AluY |
CAediting_131839 | chr1_202582873_+ | SINE | Alu | AluY |
CAediting_131842 | chr1_202585040_+ | SINE | Alu | AluJb |
CAediting_131843 | chr1_202585061_+ | SINE | Alu | AluJb |
CAediting_131844 | chr1_202585066_+ | SINE | Alu | AluJb |
CAediting_131845 | chr1_202585071_+ | SINE | Alu | AluJb |
CAediting_131846 | chr1_202585076_+ | SINE | Alu | AluJb |
CAediting_131847 | chr1_202585083_+ | SINE | Alu | AluJb |
CAediting_131848 | chr1_202585090_+ | SINE | Alu | AluJb |
CAediting_131849 | chr1_202585109_+ | SINE | Alu | AluJb |
CAediting_131850 | chr1_202585114_+ | SINE | Alu | AluJb |
CAediting_131851 | chr1_202585122_+ | SINE | Alu | AluJb |
CAediting_131852 | chr1_202585125_+ | SINE | Alu | AluJb |
CAediting_131853 | chr1_202585129_+ | SINE | Alu | AluJb |
CAediting_131854 | chr1_202585137_+ | SINE | Alu | AluJb |
CAediting_131855 | chr1_202585145_+ | SINE | Alu | AluJb |
CAediting_131856 | chr1_202585148_+ | SINE | Alu | AluJb |
CAediting_131857 | chr1_202585157_+ | SINE | Alu | AluJb |
CAediting_131858 | chr1_202585161_+ | SINE | Alu | AluJb |
CAediting_131859 | chr1_202585169_+ | SINE | Alu | AluJb |
CAediting_131860 | chr1_202585170_+ | SINE | Alu | AluJb |
CAediting_131861 | chr1_202585180_+ | SINE | Alu | AluJb |
CAediting_131862 | chr1_202585197_+ | SINE | Alu | AluJb |
CAediting_131863 | chr1_202585206_+ | SINE | Alu | AluJb |
CAediting_131864 | chr1_202585217_+ | SINE | Alu | AluJb |
CAediting_131865 | chr1_202585258_+ | SINE | Alu | AluJb |
CAediting_131866 | chr1_202585265_+ | SINE | Alu | AluJb |
CAediting_131867 | chr1_202585271_+ | SINE | Alu | AluJb |
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RNA A-to-I editing events in the alternative splicing sites for PPP1R12B |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
IR | CAediting_131801 | chr1_202582608_+ | 202582607:202582615 | 5SS | 2+0i | CAGGTGCAG | 4.95 | CGGGTGCAG | -0.19 |
IR | CAediting_131802 | chr1_202582614_+ | 202582607:202582615 | 5SS | 0+5i | CAGGTGCAG | 4.95 | CAGGTGCGG | 9.13 |
IR | CAediting_131865 | chr1_202585258_+ | 202585254:202585276 | 3SS | 0+16i | CCCAAAGCGATAGGATTACAGGC | -27.06 | CCCAGAGCGATAGGATTACAGGC | -27.86 |
IR | CAediting_131866 | chr1_202585265_+ | 202585254:202585276 | 3SS | 0+9i | CCCAAAGCGATAGGATTACAGGC | -27.06 | CCCAAAGCGATGGGATTACAGGC | -21.75 |
IR | CAediting_131867 | chr1_202585271_+ | 202585254:202585276 | 3SS | 0+3i | CCCAAAGCGATAGGATTACAGGC | -27.06 | CCCAAAGCGATAGGATTGCAGGC | -41.1 |
Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000077157.19.PPP1R12B. |
Correlation between RNA A-to-I editing and PSI for ENSG00000077157.19.PPP1R12B. |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PPP1R12B |
Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
Correlation between RNA A-to-I editing and gene expression. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
ESCA.CAediting_131862.ENSG00000077157.PPP1R12B.png |
ESCA.CAediting_131864.ENSG00000077157.PPP1R12B.png |
STAD.CAediting_131853.ENSG00000077157.PPP1R12B.png |
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Protein coding region RNA A-to-I editings for PPP1R12B |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for PPP1R12B |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_748296 | chr10_51299626_+ | ENSG00000077157.19 | ENST00000290419 | hsa-miR-605-3p | 202580523 | 202580530 | 8mer-1a | 202580509 | 202580530 | 156 | -20.49 |
CAediting_748296 | chr10_51299626_+ | ENSG00000077157.19 | ENST00000290419 | hsa-miR-605-3p | 202581049 | 202581055 | 7mer-m8 | 202581031 | 202581056 | 161 | -23.28 |
CAediting_980496 | chr14_31014685_- | ENSG00000077157.19 | ENST00000290419 | hsa-miR-624-3p | 202580734 | 202580739 | 6mer | 202580720 | 202580740 | 151 | -18.39 |
CAediting_393 | chr1_1167164_+ | ENSG00000077157.19 | ENST00000290419 | hsa-miR-200b-3p | 202580593 | 202580599 | 7mer-m8 | 202580579 | 202580600 | 143 | -11.98 |
CAediting_748296 | chr10_51299626_+ | ENSG00000077157.19 | ENST00000491336 | hsa-miR-605-3p | 202581049 | 202581055 | 7mer-m8 | 202581031 | 202581056 | 161 | -23.28 |
CAediting_980496 | chr14_31014685_- | ENSG00000077157.19 | ENST00000491336 | hsa-miR-624-3p | 202580734 | 202580739 | 6mer | 202580720 | 202580740 | 151 | -18.39 |
CAediting_393 | chr1_1167164_+ | ENSG00000077157.19 | ENST00000491336 | hsa-miR-200b-3p | 202580593 | 202580599 | 7mer-m8 | 202580579 | 202580600 | 143 | -11.98 |
CAediting_1368054 | chr19_46709310_- | ENSG00000077157.19 | ENST00000476364 | hsa-miR-320e | 202431556 | 202431563 | 8mer-1a | 202431543 | 202431563 | 145 | -18.38 |
CAediting_1368054 | chr19_46709310_- | ENSG00000077157.19 | ENST00000476364 | hsa-miR-320e | 202434729 | 202434736 | 8mer-1a | 202434718 | 202434736 | 147 | -18.11 |
CAediting_442554 | chr5_154685830_+ | ENSG00000077157.19 | ENST00000290419 | hsa-miR-1303 | 202575150 | 202575155 | 6mer | 202575136 | 202575156 | 146 | -17.31 |
CAediting_524911 | chr7_5495852_- | ENSG00000077157.19 | ENST00000290419 | hsa-miR-589-3p | 202580817 | 202580823 | 7mer-m8 | 202580801 | 202580824 | 150 | -20.62 |
CAediting_524911 | chr7_5495852_- | ENSG00000077157.19 | ENST00000491336 | hsa-miR-589-3p | 202580817 | 202580823 | 7mer-m8 | 202580801 | 202580824 | 150 | -20.62 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_86358 | chr1_109598906_+ | ENSG00000077157.19 | ENST00000290419 | hsa-miR-197-5p | 202580914 | 202580920 | 7mer-m8 | 202580899 | 202580921 | 141 | -15.01 |
CAediting_1524209 | chrX_134546392_- | ENSG00000077157.19 | ENST00000290419 | hsa-miR-503-5p | 202580864 | 202580869 | 6mer | 202580850 | 202580870 | 146 | -19.83 |
CAediting_748296 | chr10_51299626_+ | ENSG00000077157.19 | ENST00000290419 | hsa-miR-605-3p | 202580629 | 202580635 | 7mer-m8 | 202580615 | 202580636 | 140 | -13.34 |
CAediting_86358 | chr1_109598906_+ | ENSG00000077157.19 | ENST00000491336 | hsa-miR-197-5p | 202580914 | 202580920 | 7mer-m8 | 202580899 | 202580921 | 141 | -15.01 |
CAediting_1524209 | chrX_134546392_- | ENSG00000077157.19 | ENST00000491336 | hsa-miR-503-5p | 202580864 | 202580869 | 6mer | 202580850 | 202580870 | 146 | -19.83 |
CAediting_748296 | chr10_51299626_+ | ENSG00000077157.19 | ENST00000491336 | hsa-miR-605-3p | 202580629 | 202580635 | 7mer-m8 | 202580615 | 202580636 | 140 | -13.34 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for PPP1R12B |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000608999.4 | protein_coding | ||
ENST00000391959.4 | protein_coding |
RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_131801 | ENST00000608999.4 | chr1_202582608_+ | -5174.10 | -5173.00 | -5248.20 |
CAediting_131802 | ENST00000608999.4 | chr1_202582614_+ | -5174.70 | -5173.00 | -5248.20 |
CAediting_131803 | ENST00000608999.4 | chr1_202582630_+ | -5173.10 | -5173.00 | -5248.20 |
CAediting_131804 | ENST00000608999.4 | chr1_202582631_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131805 | ENST00000608999.4 | chr1_202582644_+ | -5176.60 | -5173.00 | -5248.20 |
CAediting_131806 | ENST00000608999.4 | chr1_202582661_+ | -5175.60 | -5173.00 | -5248.20 |
CAediting_131807 | ENST00000608999.4 | chr1_202582677_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131808 | ENST00000608999.4 | chr1_202582683_+ | -5172.80 | -5173.00 | -5248.20 |
CAediting_131809 | ENST00000608999.4 | chr1_202582697_+ | -5172.10 | -5173.00 | -5248.20 |
CAediting_131810 | ENST00000608999.4 | chr1_202582698_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131811 | ENST00000608999.4 | chr1_202582700_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131812 | ENST00000608999.4 | chr1_202582708_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131813 | ENST00000608999.4 | chr1_202582719_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131814 | ENST00000608999.4 | chr1_202582722_+ | -5173.50 | -5173.00 | -5248.20 |
CAediting_131815 | ENST00000608999.4 | chr1_202582723_+ | -5173.10 | -5173.00 | -5248.20 |
CAediting_131816 | ENST00000608999.4 | chr1_202582724_+ | -5173.10 | -5173.00 | -5248.20 |
CAediting_131817 | ENST00000608999.4 | chr1_202582725_+ | -5173.10 | -5173.00 | -5248.20 |
CAediting_131818 | ENST00000608999.4 | chr1_202582726_+ | -5172.70 | -5173.00 | -5248.20 |
CAediting_131819 | ENST00000608999.4 | chr1_202582728_+ | -5173.40 | -5173.00 | -5248.20 |
CAediting_131820 | ENST00000608999.4 | chr1_202582733_+ | -5173.10 | -5173.00 | -5248.20 |
CAediting_131821 | ENST00000608999.4 | chr1_202582734_+ | -5173.10 | -5173.00 | -5248.20 |
CAediting_131822 | ENST00000608999.4 | chr1_202582735_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131823 | ENST00000608999.4 | chr1_202582738_+ | -5172.70 | -5173.00 | -5248.20 |
CAediting_131824 | ENST00000608999.4 | chr1_202582742_+ | -5176.90 | -5173.00 | -5248.20 |
CAediting_131825 | ENST00000608999.4 | chr1_202582754_+ | -5176.50 | -5173.00 | -5248.20 |
CAediting_131826 | ENST00000608999.4 | chr1_202582764_+ | -5171.70 | -5173.00 | -5248.20 |
CAediting_131827 | ENST00000608999.4 | chr1_202582770_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131828 | ENST00000608999.4 | chr1_202582774_+ | -5179.70 | -5173.00 | -5248.20 |
CAediting_131829 | ENST00000608999.4 | chr1_202582797_+ | -5173.70 | -5173.00 | -5248.20 |
CAediting_131830 | ENST00000608999.4 | chr1_202582805_+ | -5172.10 | -5173.00 | -5248.20 |
CAediting_131831 | ENST00000608999.4 | chr1_202582806_+ | -5179.70 | -5173.00 | -5248.20 |
CAediting_131832 | ENST00000608999.4 | chr1_202582813_+ | -5172.10 | -5173.00 | -5248.20 |
CAediting_131833 | ENST00000608999.4 | chr1_202582826_+ | -5172.30 | -5173.00 | -5248.20 |
CAediting_131834 | ENST00000608999.4 | chr1_202582830_+ | -5172.10 | -5173.00 | -5248.20 |
CAediting_131835 | ENST00000608999.4 | chr1_202582840_+ | -5172.60 | -5173.00 | -5248.20 |
CAediting_131836 | ENST00000608999.4 | chr1_202582845_+ | -5172.60 | -5173.00 | -5248.20 |
CAediting_131837 | ENST00000608999.4 | chr1_202582869_+ | -5172.10 | -5173.00 | -5248.20 |
CAediting_131838 | ENST00000608999.4 | chr1_202582872_+ | -5176.70 | -5173.00 | -5248.20 |
CAediting_131839 | ENST00000608999.4 | chr1_202582873_+ | -5174.70 | -5173.00 | -5248.20 |
CAediting_131840 | ENST00000608999.4 | chr1_202584807_+ | -5176.50 | -5173.00 | -5248.20 |
CAediting_131841 | ENST00000608999.4 | chr1_202585028_+ | -5178.00 | -5173.00 | -5248.20 |
CAediting_131842 | ENST00000608999.4 | chr1_202585040_+ | -5172.30 | -5173.00 | -5248.20 |
CAediting_131843 | ENST00000608999.4 | chr1_202585061_+ | -5172.40 | -5173.00 | -5248.20 |
CAediting_131844 | ENST00000608999.4 | chr1_202585066_+ | -5177.20 | -5173.00 | -5248.20 |
CAediting_131845 | ENST00000608999.4 | chr1_202585071_+ | -5172.60 | -5173.00 | -5248.20 |
CAediting_131846 | ENST00000608999.4 | chr1_202585076_+ | -5172.70 | -5173.00 | -5248.20 |
CAediting_131847 | ENST00000608999.4 | chr1_202585083_+ | -5178.40 | -5173.00 | -5248.20 |
CAediting_131848 | ENST00000608999.4 | chr1_202585090_+ | -5179.20 | -5173.00 | -5248.20 |
CAediting_131849 | ENST00000608999.4 | chr1_202585109_+ | -5177.00 | -5173.00 | -5248.20 |
CAediting_131850 | ENST00000608999.4 | chr1_202585114_+ | -5172.30 | -5173.00 | -5248.20 |
CAediting_131851 | ENST00000608999.4 | chr1_202585122_+ | -5172.10 | -5173.00 | -5248.20 |
CAediting_131852 | ENST00000608999.4 | chr1_202585125_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131853 | ENST00000608999.4 | chr1_202585129_+ | -5179.60 | -5173.00 | -5248.20 |
CAediting_131854 | ENST00000608999.4 | chr1_202585137_+ | -5172.30 | -5173.00 | -5248.20 |
CAediting_131855 | ENST00000608999.4 | chr1_202585145_+ | -5177.00 | -5173.00 | -5248.20 |
CAediting_131856 | ENST00000608999.4 | chr1_202585148_+ | -5172.60 | -5173.00 | -5248.20 |
CAediting_131857 | ENST00000608999.4 | chr1_202585157_+ | -5176.90 | -5173.00 | -5248.20 |
CAediting_131858 | ENST00000608999.4 | chr1_202585161_+ | -5173.10 | -5173.00 | -5248.20 |
CAediting_131859 | ENST00000608999.4 | chr1_202585169_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131860 | ENST00000608999.4 | chr1_202585170_+ | -5173.40 | -5173.00 | -5248.20 |
CAediting_131861 | ENST00000608999.4 | chr1_202585180_+ | -5172.70 | -5173.00 | -5248.20 |
CAediting_131862 | ENST00000608999.4 | chr1_202585197_+ | -5178.80 | -5173.00 | -5248.20 |
CAediting_131863 | ENST00000608999.4 | chr1_202585206_+ | -5172.30 | -5173.00 | -5248.20 |
CAediting_131864 | ENST00000608999.4 | chr1_202585217_+ | -5177.60 | -5173.00 | -5248.20 |
CAediting_131865 | ENST00000608999.4 | chr1_202585258_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131866 | ENST00000608999.4 | chr1_202585265_+ | -5178.40 | -5173.00 | -5248.20 |
CAediting_131867 | ENST00000608999.4 | chr1_202585271_+ | -5173.00 | -5173.00 | -5248.20 |
CAediting_131801 | ENST00000391959.4 | chr1_202582608_+ | -2714.10 | -2713.40 | -2788.70 |
CAediting_131802 | ENST00000391959.4 | chr1_202582614_+ | -2715.00 | -2713.40 | -2788.70 |
CAediting_131803 | ENST00000391959.4 | chr1_202582630_+ | -2713.50 | -2713.40 | -2788.70 |
CAediting_131804 | ENST00000391959.4 | chr1_202582631_+ | -2713.40 | -2713.40 | -2788.70 |
CAediting_131805 | ENST00000391959.4 | chr1_202582644_+ | -2717.00 | -2713.40 | -2788.70 |
CAediting_131806 | ENST00000391959.4 | chr1_202582661_+ | -2716.00 | -2713.40 | -2788.70 |
CAediting_131807 | ENST00000391959.4 | chr1_202582677_+ | -2713.40 | -2713.40 | -2788.70 |
CAediting_131808 | ENST00000391959.4 | chr1_202582683_+ | -2713.20 | -2713.40 | -2788.70 |
CAediting_131809 | ENST00000391959.4 | chr1_202582697_+ | -2712.50 | -2713.40 | -2788.70 |
CAediting_131810 | ENST00000391959.4 | chr1_202582698_+ | -2713.40 | -2713.40 | -2788.70 |
CAediting_131811 | ENST00000391959.4 | chr1_202582700_+ | -2713.40 | -2713.40 | -2788.70 |
CAediting_131812 | ENST00000391959.4 | chr1_202582708_+ | -2713.40 | -2713.40 | -2788.70 |
CAediting_131813 | ENST00000391959.4 | chr1_202582719_+ | -2713.40 | -2713.40 | -2788.70 |
CAediting_131814 | ENST00000391959.4 | chr1_202582722_+ | -2713.90 | -2713.40 | -2788.70 |
CAediting_131815 | ENST00000391959.4 | chr1_202582723_+ | -2713.50 | -2713.40 | -2788.70 |
CAediting_131816 | ENST00000391959.4 | chr1_202582724_+ | -2713.50 | -2713.40 | -2788.70 |
CAediting_131817 | ENST00000391959.4 | chr1_202582725_+ | -2713.50 | -2713.40 | -2788.70 |
CAediting_131818 | ENST00000391959.4 | chr1_202582726_+ | -2713.10 | -2713.40 | -2788.70 |
CAediting_131819 | ENST00000391959.4 | chr1_202582728_+ | -2713.80 | -2713.40 | -2788.70 |
CAediting_131820 | ENST00000391959.4 | chr1_202582733_+ | -2713.50 | -2713.40 | -2788.70 |
CAediting_131821 | ENST00000391959.4 | chr1_202582734_+ | -2713.50 | -2713.40 | -2788.70 |
CAediting_131822 | ENST00000391959.4 | chr1_202582735_+ | -2713.40 | -2713.40 | -2788.70 |
CAediting_131823 | ENST00000391959.4 | chr1_202582738_+ | -2713.10 | -2713.40 | -2788.70 |
CAediting_131824 | ENST00000391959.4 | chr1_202582742_+ | -2717.30 | -2713.40 | -2788.70 |
CAediting_131825 | ENST00000391959.4 | chr1_202582754_+ | -2716.90 | -2713.40 | -2788.70 |
CAediting_131826 | ENST00000391959.4 | chr1_202582764_+ | -2712.10 | -2713.40 | -2788.70 |
CAediting_131827 | ENST00000391959.4 | chr1_202582770_+ | -2713.40 | -2713.40 | -2788.70 |
CAediting_131828 | ENST00000391959.4 | chr1_202582774_+ | -2720.10 | -2713.40 | -2788.70 |
CAediting_131829 | ENST00000391959.4 | chr1_202582797_+ | -2714.10 | -2713.40 | -2788.70 |
CAediting_131830 | ENST00000391959.4 | chr1_202582805_+ | -2712.50 | -2713.40 | -2788.70 |
CAediting_131831 | ENST00000391959.4 | chr1_202582806_+ | -2720.10 | -2713.40 | -2788.70 |
CAediting_131832 | ENST00000391959.4 | chr1_202582813_+ | -2712.50 | -2713.40 | -2788.70 |
CAediting_131833 | ENST00000391959.4 | chr1_202582826_+ | -2712.70 | -2713.40 | -2788.70 |
CAediting_131834 | ENST00000391959.4 | chr1_202582830_+ | -2712.50 | -2713.40 | -2788.70 |
CAediting_131835 | ENST00000391959.4 | chr1_202582840_+ | -2713.00 | -2713.40 | -2788.70 |
CAediting_131836 | ENST00000391959.4 | chr1_202582845_+ | -2713.00 | -2713.40 | -2788.70 |
CAediting_131837 | ENST00000391959.4 | chr1_202582869_+ | -2712.50 | -2713.40 | -2788.70 |
CAediting_131838 | ENST00000391959.4 | chr1_202582872_+ | -2717.10 | -2713.40 | -2788.70 |
CAediting_131839 | ENST00000391959.4 | chr1_202582873_+ | -2715.10 | -2713.40 | -2788.70 |
CAediting_131840 | ENST00000391959.4 | chr1_202584807_+ | -2716.90 | -2713.40 | -2788.70 |
CAediting_131841 | ENST00000391959.4 | chr1_202585028_+ | -2718.40 | -2713.40 | -2788.70 |
CAediting_131842 | ENST00000391959.4 | chr1_202585040_+ | -2712.70 | -2713.40 | -2788.70 |
CAediting_131843 | ENST00000391959.4 | chr1_202585061_+ | -2712.80 | -2713.40 | -2788.70 |
CAediting_131844 | ENST00000391959.4 | chr1_202585066_+ | -2717.60 | -2713.40 | -2788.70 |
CAediting_131845 | ENST00000391959.4 | chr1_202585071_+ | -2713.00 | -2713.40 | -2788.70 |
CAediting_131846 | ENST00000391959.4 | chr1_202585076_+ | -2713.10 | -2713.40 | -2788.70 |
CAediting_131847 | ENST00000391959.4 | chr1_202585083_+ | -2718.80 | -2713.40 | -2788.70 |
CAediting_131848 | ENST00000391959.4 | chr1_202585090_+ | -2719.60 | -2713.40 | -2788.70 |
CAediting_131849 | ENST00000391959.4 | chr1_202585109_+ | -2717.40 | -2713.40 | -2788.70 |
CAediting_131850 | ENST00000391959.4 | chr1_202585114_+ | -2712.70 | -2713.40 | -2788.70 |
CAediting_131851 | ENST00000391959.4 | chr1_202585122_+ | -2712.50 | -2713.40 | -2788.70 |
CAediting_131852 | ENST00000391959.4 | chr1_202585125_+ | -2713.40 | -2713.40 | -2788.70 |
CAediting_131853 | ENST00000391959.4 | chr1_202585129_+ | -2720.00 | -2713.40 | -2788.70 |
CAediting_131854 | ENST00000391959.4 | chr1_202585137_+ | -2712.70 | -2713.40 | -2788.70 |
CAediting_131855 | ENST00000391959.4 | chr1_202585145_+ | -2717.40 | -2713.40 | -2788.70 |
CAediting_131856 | ENST00000391959.4 | chr1_202585148_+ | -2713.00 | -2713.40 | -2788.70 |
CAediting_131857 | ENST00000391959.4 | chr1_202585157_+ | -2717.30 | -2713.40 | -2788.70 |
CAediting_131858 | ENST00000391959.4 | chr1_202585161_+ | -2713.50 | -2713.40 | -2788.70 |
CAediting_131859 | ENST00000391959.4 | chr1_202585169_+ | -2713.40 | -2713.40 | -2788.70 |
CAediting_131860 | ENST00000391959.4 | chr1_202585170_+ | -2713.80 | -2713.40 | -2788.70 |
CAediting_131861 | ENST00000391959.4 | chr1_202585180_+ | -2713.10 | -2713.40 | -2788.70 |
CAediting_131862 | ENST00000391959.4 | chr1_202585197_+ | -2719.20 | -2713.40 | -2788.70 |
CAediting_131863 | ENST00000391959.4 | chr1_202585206_+ | -2712.70 | -2713.40 | -2788.70 |
CAediting_131864 | ENST00000391959.4 | chr1_202585217_+ | -2718.00 | -2713.40 | -2788.70 |
CAediting_131865 | ENST00000391959.4 | chr1_202585258_+ | -2713.40 | -2713.40 | -2788.70 |
CAediting_131866 | ENST00000391959.4 | chr1_202585265_+ | -2718.80 | -2713.40 | -2788.70 |
CAediting_131867 | ENST00000391959.4 | chr1_202585271_+ | -2713.40 | -2713.40 | -2788.70 |
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Relation with ADAR for PPP1R12B |
Correlation between ADAR gene expression and RNA editing frequency |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
LGG | CAediting_131804 | chr1_202582631_+ | 0.00460661880539446 | 0.379886534672043 | . | . | . | . |
STAD | CAediting_131844 | chr1_202585066_+ | . | . | 0.00319749126406937 | 0.218596388536393 | . | . |
BLCA | CAediting_131853 | chr1_202585129_+ | . | . | 0.016194399516269 | 0.209750296615235 | . | . |
BRCA | CAediting_131853 | chr1_202585129_+ | 0.0107834115014344 | 0.104811084721855 | . | . | . | . |
STAD | CAediting_131853 | chr1_202585129_+ | . | . | 1.29388149231436e-06 | 0.260103326364767 | . | . |
ESCA | CAediting_131853 | chr1_202585129_+ | . | . | 0.0275082355614763 | 0.179410437976747 | . | . |
LGG | CAediting_131862 | chr1_202585197_+ | . | . | . | . | 0.00766644298212819 | 0.132321256079084 |
BRCA | CAediting_131862 | chr1_202585197_+ | 0.000418740889990367 | 0.167100840779822 | . | . | . | . |
LUAD | CAediting_131862 | chr1_202585197_+ | 0.00565211753772571 | 0.187704139025869 | . | . | . | . |
LUSC | CAediting_131862 | chr1_202585197_+ | 0.0378239887046182 | 0.179625421949251 | . | . | . | . |
ESCA | CAediting_131862 | chr1_202585197_+ | . | . | 0.0222776398549781 | 0.20035834053805 | . | . |
SKCM | CAediting_131862 | chr1_202585197_+ | 0.0298791691064986 | 0.185625053093974 | . | . | . | . |
SARC | CAediting_131862 | chr1_202585197_+ | 0.0240890421228412 | 0.221117184422996 | . | . | . | . |
LGG | CAediting_131864 | chr1_202585217_+ | . | . | 4.10163329515944e-13 | 0.407578904828 | . | . |
LUSC | CAediting_131864 | chr1_202585217_+ | 0.0369850894383245 | 0.272237231996958 | . | . | . | . |
STAD | CAediting_131864 | chr1_202585217_+ | . | . | 0.0131010880050213 | 0.189950483063021 | . | . |
ESCA | CAediting_131864 | chr1_202585217_+ | . | . | 0.0385587061980911 | 0.246107307515689 | 0.0496702810929426 | 0.233850624556795 |
SARC | CAediting_131864 | chr1_202585217_+ | 0.000460007674595353 | 0.45649441742502 | . | . | . | . |
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Relation with cancer stages for PPP1R12B |
Correlation between Cancer stages and RNA editing frequency |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BRCA | pathologic_stage | CAediting_131853 | chr1_202585129_+ | 0.0292756380402269 | 0.0905969490434332 |
ESCA | pathologic_stage | CAediting_131849 | chr1_202585109_+ | 0.0123431879767366 | 0.273538347739783 |
KIRC | pathologic_stage | CAediting_131853 | chr1_202585129_+ | 0.000746006208265565 | 0.177179815125581 |
KIRC | pathologic_stage | CAediting_131862 | chr1_202585197_+ | 0.0253079825801658 | 0.132254725987587 |
KIRC | pathologic_stage | CAediting_131864 | chr1_202585217_+ | 0.0167330425817568 | 0.164951682840626 |
OV | clinical_stage | CAediting_131849 | chr1_202585109_+ | 0.0415656768205993 | -0.289316523119968 |
THCA | pathologic_stage | CAediting_131864 | chr1_202585217_+ | 0.0106759670656108 | 0.301272976298316 |
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Relation with survival for PPP1R12B |
Correlation between RNA editing and survival |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
LGG | CAediting_131849 | chr1_202585109_+ | 0.0332505242173036 | 0.0377946 | 10575.1 |
Top |
RelatedDrugs for PPP1R12B |
Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PPP1R12B |
Diseases associated with this gene. (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
PPP1R12B | C0006142 | Malignant neoplasm of breast | 1 | CTD_human |
PPP1R12B | C0027626 | Neoplasm Invasiveness | 1 | CTD_human |
PPP1R12B | C0206692 | Carcinoma, Lobular | 1 | CTD_human |
PPP1R12B | C0678222 | Breast Carcinoma | 1 | CTD_human |
PPP1R12B | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
PPP1R12B | C1458155 | Mammary Neoplasms | 1 | CTD_human |
PPP1R12B | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |