Home

Download

Statistics

Examples

Help

Contact

Editing gene: ATF1 (CAeditome ID:466)

Gene summary for ATF1

Gene summary

Gene information	Gene symbol	ATF1
	Gene ID	466
	Gene name	activating transcription factor 1
	Synonyms	EWS-ATF1\|FUS/ATF-1\|TREB36
	Cytomap	12q13.12
	Type of gene	protein-coding
	Description	cyclic AMP-dependent transcription factor ATF-1cAMP-dependent transcription factor ATF-1
	Modification date	20210518
	UniProtAcc	P18846
	Context	- 33917483(Blockade of AMPK-Mediated cAMP-PKA-CREB/ATF1 Signaling Synergizes with Aspirin to Inhibit Hepatocellular Carcinoma)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ATF1	GO:0000977	Cyclic AMP-dependent transcription factor ATF-1	1655749
ATF1	GO:0001228	Cyclic AMP-dependent transcription factor ATF-1	1655749
ATF1	GO:0045944	Cyclic AMP-dependent transcription factor ATF-1	1655749
ATF1	GO:0005634	Cyclic AMP-dependent transcription factor ATF-1	8798441
ATF1	GO:0005654	Cyclic AMP-dependent transcription factor ATF-1	0000052
ATF1	GO:1990590	Cyclic AMP-dependent transcription factor ATF-1	12871976

Top

RNA A-to-I events for ATF1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000123268.7

RNA A-to-I editing events in Cancer.

CAediting_889019(50768107, +), CAediting_889020(50771178, +), CAediting_889021(50771297, +), CAediting_889022(50775383, +), CAediting_889023(50775384, +), CAediting_889024(50775441, +), CAediting_889025(50775447, +), CAediting_889026(50775529, +), CAediting_889027(50775531, +), CAediting_889028(50776191, +), CAediting_889029(50776237, +), CAediting_889030(50776378, +), CAediting_889031(50776403, +), CAediting_889032(50776408, +), CAediting_889033(50776413, +), CAediting_889034(50776418, +), CAediting_889035(50776427, +), CAediting_889036(50776450, +), CAediting_889037(50777010, +), CAediting_889038(50777512, +), CAediting_889039(50777545, +), CAediting_889040(50777634, +), CAediting_889041(50777726, +), CAediting_889042(50777976, +), CAediting_889043(50778355, +), CAediting_889044(50778714, +), CAediting_889045(50778727, +), CAediting_889046(50778849, +), CAediting_889047(50781551, +), CAediting_889048(50781817, +), CAediting_889049(50781818, +), CAediting_889050(50781821, +), CAediting_889051(50781835, +), CAediting_889052(50781856, +), CAediting_889053(50781870, +), CAediting_889054(50783716, +), CAediting_889055(50783747, +), CAediting_889056(50783788, +), CAediting_889057(50783996, +), CAediting_889058(50784020, +), CAediting_889059(50784056, +), CAediting_889060(50785164, +), CAediting_889061(50787477, +), CAediting_889062(50787491, +), CAediting_889063(50787518, +), CAediting_889064(50787523, +), CAediting_889065(50787524, +), CAediting_889066(50787598, +), CAediting_889067(50787717, +), CAediting_889068(50788283, +), CAediting_889069(50788312, +), CAediting_889070(50789582, +), CAediting_889071(50790304, +), CAediting_889072(50790305, +), CAediting_889073(50790361, +), CAediting_889074(50796140, +), CAediting_889075(50796445, +), CAediting_889076(50796446, +), CAediting_889077(50797548, +), CAediting_889078(50797586, +), CAediting_889079(50797654, +), CAediting_889080(50799258, +), CAediting_889081(50799334, +), CAediting_889082(50802354, +), CAediting_889083(50802649, +), CAediting_889084(50802751, +), CAediting_889085(50802818, +), CAediting_889086(50802825, +), CAediting_889087(50805408, +), CAediting_889088(50805533, +), CAediting_889089(50806031, +), CAediting_889090(50806072, +), CAediting_889091(50806083, +), CAediting_889092(50807284, +), CAediting_889093(50808390, +), CAediting_889094(50808409, +), CAediting_889095(50808428, +), CAediting_889096(50808429, +), CAediting_889097(50808446, +), CAediting_889098(50808458, +), CAediting_889099(50808470, +), CAediting_889100(50808512, +), CAediting_889101(50808565, +), CAediting_889102(50809136, +), CAediting_889103(50809293, +), CAediting_889104(50809357, +), CAediting_889105(50809914, +), CAediting_889106(50810398, +), CAediting_889107(50811506, +), CAediting_889108(50811515, +), CAediting_889109(50811543, +), CAediting_889110(50811570, +), CAediting_889111(50811711, +), CAediting_889112(50811726, +), CAediting_889113(50811730, +), CAediting_889114(50811736, +), CAediting_889115(50811737, +), CAediting_889116(50811748, +), CAediting_889117(50811778, +), CAediting_889118(50813759, +), CAediting_889119(50815066, +), CAediting_889120(50815067, +), CAediting_889121(50815498, +), CAediting_889122(50815511, +), CAediting_889123(50815520, +), CAediting_889124(50816167, +), CAediting_889125(50816216, +), CAediting_889126(50816631, +), CAediting_889127(50816638, +), CAediting_889128(50816659, +), CAediting_889129(50816664, +), CAediting_889130(50818335, +), CAediting_889131(50818684, +),

Top

RNA editing positional annotations for ATF1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_889019	chr12_50768107_+	intronic
CAediting_889020	chr12_50771178_+	intronic
CAediting_889021	chr12_50771297_+	intronic
CAediting_889022	chr12_50775383_+	intronic
CAediting_889023	chr12_50775384_+	intronic
CAediting_889024	chr12_50775441_+	intronic
CAediting_889025	chr12_50775447_+	intronic
CAediting_889026	chr12_50775529_+	intronic
CAediting_889027	chr12_50775531_+	intronic
CAediting_889028	chr12_50776191_+	intronic
CAediting_889029	chr12_50776237_+	intronic
CAediting_889030	chr12_50776378_+	intronic
CAediting_889031	chr12_50776403_+	intronic
CAediting_889032	chr12_50776408_+	intronic
CAediting_889033	chr12_50776413_+	intronic
CAediting_889034	chr12_50776418_+	intronic
CAediting_889035	chr12_50776427_+	intronic
CAediting_889036	chr12_50776450_+	intronic
CAediting_889037	chr12_50777010_+	intronic
CAediting_889038	chr12_50777512_+	intronic
CAediting_889039	chr12_50777545_+	intronic
CAediting_889040	chr12_50777634_+	intronic
CAediting_889041	chr12_50777726_+	intronic
CAediting_889042	chr12_50777976_+	intronic
CAediting_889043	chr12_50778355_+	intronic
CAediting_889044	chr12_50778714_+	intronic
CAediting_889045	chr12_50778727_+	intronic
CAediting_889046	chr12_50778849_+	intronic
CAediting_889047	chr12_50781551_+	intronic
CAediting_889048	chr12_50781817_+	intronic
CAediting_889049	chr12_50781818_+	intronic
CAediting_889050	chr12_50781821_+	intronic
CAediting_889051	chr12_50781835_+	intronic
CAediting_889052	chr12_50781856_+	intronic
CAediting_889053	chr12_50781870_+	intronic
CAediting_889054	chr12_50783716_+	intronic
CAediting_889055	chr12_50783747_+	intronic
CAediting_889056	chr12_50783788_+	intronic
CAediting_889057	chr12_50783996_+	intronic
CAediting_889058	chr12_50784020_+	intronic
CAediting_889059	chr12_50784056_+	intronic
CAediting_889060	chr12_50785164_+	intronic
CAediting_889061	chr12_50787477_+	intronic
CAediting_889062	chr12_50787491_+	intronic
CAediting_889063	chr12_50787518_+	intronic
CAediting_889064	chr12_50787523_+	intronic
CAediting_889065	chr12_50787524_+	intronic
CAediting_889066	chr12_50787598_+	intronic
CAediting_889067	chr12_50787717_+	intronic
CAediting_889068	chr12_50788283_+	exonic
CAediting_889069	chr12_50788312_+	exonic
CAediting_889070	chr12_50789582_+	intronic
CAediting_889071	chr12_50790304_+	intronic
CAediting_889072	chr12_50790305_+	intronic
CAediting_889073	chr12_50790361_+	intronic
CAediting_889074	chr12_50796140_+	intronic
CAediting_889075	chr12_50796445_+	intronic
CAediting_889076	chr12_50796446_+	intronic
CAediting_889077	chr12_50797548_+	intronic
CAediting_889078	chr12_50797586_+	intronic
CAediting_889079	chr12_50797654_+	intronic
CAediting_889080	chr12_50799258_+	intronic
CAediting_889081	chr12_50799334_+	intronic
CAediting_889082	chr12_50802354_+	intronic
CAediting_889083	chr12_50802649_+	intronic
CAediting_889084	chr12_50802751_+	intronic
CAediting_889085	chr12_50802818_+	intronic
CAediting_889086	chr12_50802825_+	intronic
CAediting_889087	chr12_50805408_+	intronic
CAediting_889088	chr12_50805533_+	intronic
CAediting_889089	chr12_50806031_+	intronic
CAediting_889090	chr12_50806072_+	intronic
CAediting_889091	chr12_50806083_+	intronic
CAediting_889092	chr12_50807284_+	intronic
CAediting_889093	chr12_50808390_+	intronic
CAediting_889094	chr12_50808409_+	intronic
CAediting_889095	chr12_50808428_+	intronic
CAediting_889096	chr12_50808429_+	intronic
CAediting_889097	chr12_50808446_+	intronic
CAediting_889098	chr12_50808458_+	intronic
CAediting_889099	chr12_50808470_+	intronic
CAediting_889100	chr12_50808512_+	intronic
CAediting_889101	chr12_50808565_+	intronic
CAediting_889102	chr12_50809136_+	intronic
CAediting_889103	chr12_50809293_+	intronic
CAediting_889104	chr12_50809357_+	intronic
CAediting_889105	chr12_50809914_+	intronic
CAediting_889106	chr12_50810398_+	intronic
CAediting_889107	chr12_50811506_+	intronic
CAediting_889108	chr12_50811515_+	intronic
CAediting_889109	chr12_50811543_+	intronic
CAediting_889110	chr12_50811570_+	intronic
CAediting_889111	chr12_50811711_+	intronic
CAediting_889112	chr12_50811726_+	intronic
CAediting_889113	chr12_50811730_+	intronic
CAediting_889114	chr12_50811736_+	intronic
CAediting_889115	chr12_50811737_+	intronic
CAediting_889116	chr12_50811748_+	intronic
CAediting_889117	chr12_50811778_+	intronic
CAediting_889118	chr12_50813759_+	intronic
CAediting_889119	chr12_50815066_+	intronic
CAediting_889120	chr12_50815067_+	intronic
CAediting_889121	chr12_50815498_+	intronic
CAediting_889122	chr12_50815511_+	intronic
CAediting_889123	chr12_50815520_+	intronic
CAediting_889124	chr12_50816167_+	intronic
CAediting_889125	chr12_50816216_+	intronic
CAediting_889126	chr12_50816631_+	intronic
CAediting_889127	chr12_50816638_+	intronic
CAediting_889128	chr12_50816659_+	intronic
CAediting_889129	chr12_50816664_+	intronic
CAediting_889130	chr12_50818335_+	intronic
CAediting_889131	chr12_50818684_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_889019	chr12_50768107_+	SINE	Alu	AluSx
CAediting_889020	chr12_50771178_+	SINE	Alu	AluSx
CAediting_889021	chr12_50771297_+	SINE	Alu	AluSx
CAediting_889022	chr12_50775383_+	SINE	Alu	AluJo
CAediting_889023	chr12_50775384_+	SINE	Alu	AluJo
CAediting_889024	chr12_50775441_+	SINE	Alu	AluJo
CAediting_889025	chr12_50775447_+	SINE	Alu	AluJo
CAediting_889026	chr12_50775529_+	SINE	Alu	AluJo
CAediting_889027	chr12_50775531_+	SINE	Alu	AluJo
CAediting_889028	chr12_50776191_+	SINE	Alu	AluY
CAediting_889029	chr12_50776237_+	SINE	Alu	AluY
CAediting_889030	chr12_50776378_+	SINE	Alu	AluJo
CAediting_889031	chr12_50776403_+	SINE	Alu	AluJo
CAediting_889032	chr12_50776408_+	SINE	Alu	AluJo
CAediting_889033	chr12_50776413_+	SINE	Alu	AluJo
CAediting_889034	chr12_50776418_+	SINE	Alu	AluJo
CAediting_889035	chr12_50776427_+	SINE	Alu	AluJo
CAediting_889036	chr12_50776450_+	SINE	Alu	AluJo
CAediting_889037	chr12_50777010_+	SINE	Alu	AluSx
CAediting_889038	chr12_50777512_+	SINE	Alu	AluJb
CAediting_889039	chr12_50777545_+	SINE	Alu	AluJb
CAediting_889040	chr12_50777634_+	SINE	Alu	AluJb
CAediting_889041	chr12_50777726_+	SINE	Alu	AluJb
CAediting_889042	chr12_50777976_+	SINE	Alu	AluJo
CAediting_889043	chr12_50778355_+	SINE	Alu	AluSc
CAediting_889044	chr12_50778714_+	SINE	Alu	AluSx1
CAediting_889045	chr12_50778727_+	SINE	Alu	AluSx1
CAediting_889046	chr12_50778849_+	SINE	Alu	AluSx1
CAediting_889047	chr12_50781551_+	SINE	Alu	AluSx1
CAediting_889048	chr12_50781817_+	SINE	Alu	AluJo
CAediting_889049	chr12_50781818_+	SINE	Alu	AluJo
CAediting_889050	chr12_50781821_+	SINE	Alu	AluJo
CAediting_889051	chr12_50781835_+	SINE	Alu	AluJo
CAediting_889052	chr12_50781856_+	SINE	Alu	AluJo
CAediting_889053	chr12_50781870_+	SINE	Alu	AluJo
CAediting_889054	chr12_50783716_+	SINE	Alu	AluSg7
CAediting_889055	chr12_50783747_+	SINE	Alu	AluSg7
CAediting_889056	chr12_50783788_+	SINE	Alu	AluSg7
CAediting_889057	chr12_50783996_+	SINE	Alu	AluJb
CAediting_889058	chr12_50784020_+	SINE	Alu	AluJb
CAediting_889059	chr12_50784056_+	SINE	Alu	AluJb
CAediting_889060	chr12_50785164_+	SINE	Alu	FLAM_A
CAediting_889061	chr12_50787477_+	SINE	Alu	AluJo
CAediting_889062	chr12_50787491_+	SINE	Alu	AluJo
CAediting_889063	chr12_50787518_+	SINE	Alu	AluJo
CAediting_889064	chr12_50787523_+	SINE	Alu	AluJo
CAediting_889065	chr12_50787524_+	SINE	Alu	AluJo
CAediting_889066	chr12_50787598_+	SINE	Alu	AluJo
CAediting_889067	chr12_50787717_+	SINE	Alu	AluJo
CAediting_889068	chr12_50788283_+	SINE	Alu	AluJo
CAediting_889069	chr12_50788312_+	SINE	Alu	AluJo
CAediting_889070	chr12_50789582_+	SINE	Alu	AluSx1
CAediting_889071	chr12_50790304_+	SINE	Alu	AluJb
CAediting_889072	chr12_50790305_+	SINE	Alu	AluJb
CAediting_889073	chr12_50790361_+	SINE	Alu	AluJb
CAediting_889074	chr12_50796140_+	SINE	Alu	AluJo
CAediting_889075	chr12_50796445_+	SINE	Alu	AluSx
CAediting_889076	chr12_50796446_+	SINE	Alu	AluSx
CAediting_889077	chr12_50797548_+	SINE	Alu	AluJb
CAediting_889078	chr12_50797586_+	SINE	Alu	AluJb
CAediting_889079	chr12_50797654_+	SINE	Alu	AluJb
CAediting_889080	chr12_50799258_+	SINE	Alu	AluJo
CAediting_889081	chr12_50799334_+	SINE	Alu	AluJo
CAediting_889082	chr12_50802354_+	SINE	Alu	AluSq2
CAediting_889083	chr12_50802649_+	SINE	Alu	AluSx4
CAediting_889084	chr12_50802751_+	SINE	Alu	AluSx4
CAediting_889085	chr12_50802818_+	SINE	Alu	AluSx4
CAediting_889086	chr12_50802825_+	SINE	Alu	AluSx4
CAediting_889087	chr12_50805408_+	SINE	Alu	AluJb
CAediting_889088	chr12_50805533_+	SINE	Alu	AluJb
CAediting_889089	chr12_50806031_+	SINE	Alu	AluSq
CAediting_889090	chr12_50806072_+	SINE	Alu	AluSq
CAediting_889091	chr12_50806083_+	SINE	Alu	AluSq
CAediting_889092	chr12_50807284_+	SINE	Alu	AluJb
CAediting_889093	chr12_50808390_+	SINE	Alu	AluSz
CAediting_889094	chr12_50808409_+	SINE	Alu	AluSz
CAediting_889095	chr12_50808428_+	SINE	Alu	AluSz
CAediting_889096	chr12_50808429_+	SINE	Alu	AluSz
CAediting_889097	chr12_50808446_+	SINE	Alu	AluSz
CAediting_889098	chr12_50808458_+	SINE	Alu	AluSz
CAediting_889099	chr12_50808470_+	SINE	Alu	AluSz
CAediting_889100	chr12_50808512_+	SINE	Alu	AluSz
CAediting_889101	chr12_50808565_+	SINE	Alu	AluSz
CAediting_889102	chr12_50809136_+	SINE	Alu	AluSz6
CAediting_889103	chr12_50809293_+	SINE	Alu	AluSz6
CAediting_889104	chr12_50809357_+	SINE	Alu	AluSz6
CAediting_889105	chr12_50809914_+	SINE	Alu	AluSq
CAediting_889106	chr12_50810398_+	SINE	Alu	AluSz
CAediting_889107	chr12_50811506_+	SINE	Alu	AluJr
CAediting_889108	chr12_50811515_+	SINE	Alu	AluJr
CAediting_889109	chr12_50811543_+	SINE	Alu	AluJr
CAediting_889110	chr12_50811570_+	SINE	Alu	AluJr
CAediting_889111	chr12_50811711_+	SINE	Alu	AluJr
CAediting_889112	chr12_50811726_+	SINE	Alu	AluJr
CAediting_889113	chr12_50811730_+	SINE	Alu	AluJr
CAediting_889114	chr12_50811736_+	SINE	Alu	AluJr
CAediting_889115	chr12_50811737_+	SINE	Alu	AluJr
CAediting_889116	chr12_50811748_+	SINE	Alu	AluJr
CAediting_889117	chr12_50811778_+	SINE	Alu	AluJr
CAediting_889118	chr12_50813759_+	SINE	Alu	AluSx
CAediting_889119	chr12_50815066_+	SINE	Alu	AluY
CAediting_889120	chr12_50815067_+	SINE	Alu	AluY
CAediting_889121	chr12_50815498_+	SINE	Alu	AluJb
CAediting_889122	chr12_50815511_+	SINE	Alu	AluJb
CAediting_889123	chr12_50815520_+	SINE	Alu	AluJb
CAediting_889124	chr12_50816167_+	SINE	Alu	AluJb
CAediting_889125	chr12_50816216_+	SINE	Alu	AluJb
CAediting_889126	chr12_50816631_+	SINE	Alu	AluJb
CAediting_889127	chr12_50816638_+	SINE	Alu	AluJb
CAediting_889128	chr12_50816659_+	SINE	Alu	AluJb
CAediting_889129	chr12_50816664_+	SINE	Alu	AluJb
CAediting_889130	chr12_50818335_+	SINE	Alu	AluJr
CAediting_889131	chr12_50818684_+	SINE	Alu	AluSx

Top

RNA A-to-I editing events in the alternative splicing sites for ATF1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000123268.7.ATF1.

Correlation between RNA A-to-I editing and PSI for ENSG00000123268.7.ATF1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATF1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for ATF1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for ATF1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77128	chr1_85133844_+	ENSG00000123268.7	ENST00000551831	hsa-miR-4423-3p	50814164	50814170	7mer-m8	50814151	50814171	142	-13
CAediting_396018	chr5_1062918_-	ENSG00000123268.7	ENST00000551831	hsa-miR-4635	50819950	50819956	7mer-m8	50819937	50819957	159	-26.46

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ATF1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ATF1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for ATF1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
STAD	pathologic_stage	CAediting_889112	chr12_50811726_+	0.0237760437922961	0.307349678753569

Top

Relation with survival for ATF1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ATF1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
ATF1	P18846	DB00852	Pseudoephedrine	Cyclic AMP-dependent transcription factor ATF-1	SmallMoleculeDrug	approved

Top

RelatedDiseases for ATF1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
ATF1	C0032460	Polycystic Ovary Syndrome	1	CTD_human
ATF1	C0206651	Clear Cell Sarcoma of Soft Tissue	1	ORPHANET
ATF1	C1136382	Sclerocystic Ovaries	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene