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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: EEF1A1P11 (CAeditome ID:440595) |
Gene summary for EEF1A1P11 |
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Gene information | Gene symbol | EEF1A1P11 | Gene ID | 440595 |
Gene name | eukaryotic translation elongation factor 1 alpha 1 pseudogene 11 | |
Synonyms | EEF1AL9 | |
Cytomap | 1p21.3 | |
Type of gene | pseudo | |
Description | eukaryotic translation elongation factor 1 alpha 1 (EEF1A1) pseudogeneeukaryotic translation elongation factor 1 alpha-like 9 pseudogene | |
Modification date | 20210518 | |
UniProtAcc | . | |
Context |
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Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for EEF1A1P11 |
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CAediting_82735(96447448, +), CAediting_82736(96447449, +), CAediting_82737(96447485, +), CAediting_82738(96447516, +), CAediting_82739(96447790, +), CAediting_82740(96447819, +), CAediting_82741(96447828, +), CAediting_82742(96447851, +), |
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RNA editing positional annotations for EEF1A1P11 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_82735 | chr1_96447448_+ | ncRNA_exonic |
CAediting_82736 | chr1_96447449_+ | ncRNA_exonic |
CAediting_82737 | chr1_96447485_+ | ncRNA_exonic |
CAediting_82738 | chr1_96447516_+ | ncRNA_exonic |
CAediting_82739 | chr1_96447790_+ | ncRNA_exonic |
CAediting_82740 | chr1_96447819_+ | ncRNA_exonic |
CAediting_82741 | chr1_96447828_+ | ncRNA_exonic |
CAediting_82742 | chr1_96447851_+ | ncRNA_exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
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RNA A-to-I editing events in the alternative splicing sites for EEF1A1P11 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for EEF1A1P11 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for EEF1A1P11 |
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The effects of the RNA editing to the miRNA binding sites for EEF1A1P11 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for EEF1A1P11 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000415278.1 | processed_pseudogene | ![]() | ![]() |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_82735 | ENST00000415278.1 | chr1_96447448_+ | -425.00 | -424.10 | -433.90 |
CAediting_82736 | ENST00000415278.1 | chr1_96447449_+ | -424.60 | -424.10 | -433.90 |
CAediting_82737 | ENST00000415278.1 | chr1_96447485_+ | -423.80 | -424.10 | -433.90 |
CAediting_82738 | ENST00000415278.1 | chr1_96447516_+ | -424.40 | -424.10 | -433.90 |
CAediting_82739 | ENST00000415278.1 | chr1_96447790_+ | -423.40 | -424.10 | -433.90 |
CAediting_82740 | ENST00000415278.1 | chr1_96447819_+ | -431.00 | -424.10 | -433.90 |
CAediting_82741 | ENST00000415278.1 | chr1_96447828_+ | -424.10 | -424.10 | -433.90 |
CAediting_82742 | ENST00000415278.1 | chr1_96447851_+ | -424.30 | -424.10 | -433.90 |
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Relation with ADAR for EEF1A1P11 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for EEF1A1P11 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for EEF1A1P11 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for EEF1A1P11 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for EEF1A1P11 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |