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| Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: PLIN5 (CAeditome ID:440503) |
Gene summary for PLIN5 |
 Gene summary |
| Gene information | Gene symbol | PLIN5 | Gene ID | 440503 |
| Gene name | perilipin 5 | |
| Synonyms | LSDA5|LSDP5|MLDP|OXPAT | |
| Cytomap | 19p13.3 | |
| Type of gene | protein-coding | |
| Description | perilipin-5lipid storage droplet protein 5 | |
| Modification date | 20210518 | |
| UniProtAcc | Q00G26 | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| PLIN5 | GO:0005811 | Perilipin-5 | 0000052 |
| PLIN5 | GO:0043231 | Perilipin-5 | 0000052 |
Top |
RNA A-to-I events for PLIN5 |
| RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
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| RNA editing frequencies across 33 cancers of gene: ENSG00000214456.7 |
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| RNA A-to-I editing events in Cancer. |
| CAediting_1277912(4522748, -), CAediting_1277913(4522772, -), CAediting_1277914(4522775, -), CAediting_1277915(4522780, -), CAediting_1277916(4522799, -), CAediting_1277917(4522820, -), CAediting_1277918(4522827, -), CAediting_1277919(4522946, -), CAediting_1277920(4522960, -), CAediting_1277921(4522970, -), CAediting_1277922(4522982, -), CAediting_1277923(4522985, -), CAediting_1277924(4522989, -), CAediting_1277925(4523006, -), CAediting_1277926(4523012, -), CAediting_1277927(4523013, -), CAediting_1277928(4523020, -), CAediting_1277929(4523036, -), CAediting_1277930(4523043, -), CAediting_1277931(4523047, -), CAediting_1277932(4523053, -), CAediting_1277933(4523059, -), CAediting_1277934(4523149, -), CAediting_1277935(4523156, -), CAediting_1277936(4523171, -), CAediting_1277937(4523192, -), CAediting_1277938(4523198, -), CAediting_1277939(4523206, -), CAediting_1277940(4523214, -), CAediting_1277941(4523216, -), CAediting_1277942(4524307, -), CAediting_1277943(4524335, -), CAediting_1277944(4526234, -), CAediting_1277945(4526244, -), CAediting_1277946(4526255, -), CAediting_1277947(4526257, -), CAediting_1277948(4526259, -), CAediting_1277949(4526264, -), CAediting_1277950(4526269, -), CAediting_1277951(4526279, -), CAediting_1277952(4526294, -), CAediting_1277953(4526298, -), CAediting_1277954(4526307, -), CAediting_1277955(4526311, -), CAediting_1277956(4526319, -), CAediting_1277957(4526327, -), CAediting_1277958(4526333, -), CAediting_1277959(4526345, -), CAediting_1277960(4526350, -), CAediting_1277961(4526354, -), CAediting_1277962(4526385, -), CAediting_1277963(4526386, -), CAediting_1277964(4526392, -), CAediting_1277965(4526398, -), CAediting_1277966(4526415, -), CAediting_1277967(4526417, -), CAediting_1277968(4526425, -), CAediting_1277969(4526435, -), CAediting_1277970(4526438, -), CAediting_1277971(4526459, -), CAediting_1277972(4526462, -), CAediting_1277973(4526472, -), CAediting_1277974(4526477, -), CAediting_1277975(4526480, -), CAediting_1277976(4526485, -), CAediting_1277977(4526492, -), CAediting_1277978(4526493, -), CAediting_1277979(4526500, -), CAediting_1277980(4526502, -), CAediting_1277981(4526516, -), CAediting_1277982(4526524, -), CAediting_1277983(4526525, -), CAediting_1277984(4526531, -), CAediting_1277985(4526537, -), CAediting_1277986(4526581, -), CAediting_1277987(4526582, -), CAediting_1277988(4526584, -), CAediting_1277989(4526596, -), CAediting_1277990(4526597, -), CAediting_1277991(4526611, -), CAediting_1277992(4526619, -), CAediting_1277993(4526620, -), CAediting_1277994(4526623, -), CAediting_1277995(4526624, -), CAediting_1277996(4526651, -), CAediting_1277997(4526663, -), CAediting_1277998(4526678, -), CAediting_1277999(4526680, -), CAediting_1278000(4526682, -), CAediting_1278001(4526684, -), CAediting_1278002(4526695, -), CAediting_1278003(4526703, -), CAediting_1278004(4526704, -), CAediting_1278005(4526714, -), CAediting_1278006(4526734, -), CAediting_1278007(4526746, -), CAediting_1278008(4526758, -), CAediting_1278009(4526771, -), CAediting_1278010(4526776, -), CAediting_1278011(4526781, -), CAediting_1278012(4526801, -), CAediting_1278013(4526806, -), CAediting_1278014(4526811, -), CAediting_1278015(4526827, -), CAediting_1278016(4526832, -), CAediting_1278017(4526850, -), CAediting_1278018(4526854, -), CAediting_1278019(4526856, -), CAediting_1278020(4526978, -), CAediting_1278021(4526980, -), CAediting_1278022(4526992, -), CAediting_1278023(4526993, -), CAediting_1278024(4526994, -), CAediting_1278025(4527015, -), CAediting_1278026(4527019, -), CAediting_1278027(4527020, -), CAediting_1278028(4527069, -), CAediting_1278029(4527071, -), CAediting_1278030(4527148, -), CAediting_1278031(4527152, -), CAediting_1278032(4527159, -), CAediting_1278033(4527165, -), CAediting_1278034(4527172, -), CAediting_1278035(4527173, -), CAediting_1278036(4527181, -), CAediting_1278037(4527184, -), CAediting_1278038(4527191, -), CAediting_1278039(4527197, -), CAediting_1278040(4527200, -), CAediting_1278041(4527204, -), CAediting_1278042(4527208, -), CAediting_1278043(4527214, -), CAediting_1278044(4527243, -), CAediting_1278045(4527244, -), CAediting_1278046(4527246, -), CAediting_1278047(4527247, -), CAediting_1278048(4527250, -), CAediting_1278049(4527252, -), CAediting_1278050(4527253, -), CAediting_1278051(4527259, -), CAediting_1278052(4527270, -), CAediting_1278053(4527271, -), CAediting_1278054(4527306, -), CAediting_1278055(4527314, -), CAediting_1278056(4527344, -), CAediting_1278057(4527345, -), CAediting_1278058(4527353, -), CAediting_1278059(4527401, -), CAediting_1278060(4527407, -), CAediting_1278061(4527415, -), CAediting_1278062(4527417, -), CAediting_1278063(4527456, -), CAediting_1278064(4527457, -), CAediting_1278065(4527477, -), CAediting_1278066(4527492, -), CAediting_1278067(4527508, -), CAediting_1278068(4527525, -), CAediting_1278069(4527597, -), CAediting_1278070(4527600, -), CAediting_1278071(4527612, -), CAediting_1278072(4527613, -), CAediting_1278073(4527614, -), CAediting_1278074(4527679, -), CAediting_1278075(4527682, -), CAediting_1278076(4527686, -), CAediting_1278077(4527696, -), CAediting_1278078(4527705, -), CAediting_1278079(4527707, -), CAediting_1278080(4527713, -), CAediting_1278081(4527717, -), CAediting_1278082(4527721, -), CAediting_1278083(4527723, -), CAediting_1278084(4527733, -), CAediting_1278085(4527737, -), CAediting_1278086(4527745, -), CAediting_1278087(4527758, -), CAediting_1278088(4527762, -), CAediting_1278089(4527763, -), CAediting_1278090(4527783, -), CAediting_1278091(4527785, -), CAediting_1278092(4527793, -), CAediting_1278093(4527798, -), CAediting_1278094(4527812, -), CAediting_1278095(4527819, -), CAediting_1278096(4527831, -), CAediting_1278097(4527838, -), CAediting_1278098(4527841, -), CAediting_1278099(4527945, -), CAediting_1278100(4527977, -), CAediting_1278101(4527982, -), CAediting_1278102(4527986, -), CAediting_1278103(4528015, -), CAediting_1278104(4528025, -), CAediting_1278105(4528074, -), CAediting_1278106(4528077, -), CAediting_1278107(4528078, -), CAediting_1278108(4528080, -), CAediting_1278109(4528081, -), CAediting_1278110(4528084, -), CAediting_1278111(4528087, -), CAediting_1278112(4528104, -), CAediting_1278113(4528138, -), CAediting_1278114(4528176, -), CAediting_1278115(4528181, -), CAediting_1278116(4528190, -), CAediting_1278117(4528438, -), CAediting_1278118(4528451, -), CAediting_1278119(4528485, -), CAediting_1278120(4528506, -), CAediting_1278121(4528514, -), CAediting_1278122(4528515, -), CAediting_1278123(4528517, -), CAediting_1278124(4528537, -), CAediting_1278125(4528541, -), CAediting_1278126(4528547, -), CAediting_1278127(4528573, -), CAediting_1278128(4528576, -), CAediting_1278129(4528578, -), CAediting_1278130(4528579, -), CAediting_1278131(4528580, -), CAediting_1278132(4528583, -), CAediting_1278133(4528586, -), CAediting_1278134(4528613, -), CAediting_1278135(4528658, -), CAediting_1278136(4528680, -), CAediting_1278137(4528681, -), CAediting_1278138(4528697, -), CAediting_1278139(4528699, -), CAediting_1278140(4528703, -), CAediting_1278141(4530778, -), CAediting_1278142(4532581, -), CAediting_1278143(4532789, -), CAediting_1278144(4532790, -), CAediting_1278145(4533027, -), CAediting_1278146(4533314, -), |
Top |
RNA editing positional annotations for PLIN5 using Annovar |
| Protein coding RNA editing(s). |
| CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| CAeditome ID | Position | Variant type |
| CAediting_1277912 | chr19_4522748_- | UTR3 |
| CAediting_1277913 | chr19_4522772_- | UTR3 |
| CAediting_1277914 | chr19_4522775_- | UTR3 |
| CAediting_1277915 | chr19_4522780_- | UTR3 |
| CAediting_1277916 | chr19_4522799_- | UTR3 |
| CAediting_1277917 | chr19_4522820_- | UTR3 |
| CAediting_1277918 | chr19_4522827_- | UTR3 |
| CAediting_1277919 | chr19_4522946_- | UTR3 |
| CAediting_1277920 | chr19_4522960_- | UTR3 |
| CAediting_1277921 | chr19_4522970_- | UTR3 |
| CAediting_1277922 | chr19_4522982_- | UTR3 |
| CAediting_1277923 | chr19_4522985_- | UTR3 |
| CAediting_1277924 | chr19_4522989_- | UTR3 |
| CAediting_1277925 | chr19_4523006_- | UTR3 |
| CAediting_1277926 | chr19_4523012_- | UTR3 |
| CAediting_1277927 | chr19_4523013_- | UTR3 |
| CAediting_1277928 | chr19_4523020_- | UTR3 |
| CAediting_1277929 | chr19_4523036_- | UTR3 |
| CAediting_1277930 | chr19_4523043_- | UTR3 |
| CAediting_1277931 | chr19_4523047_- | UTR3 |
| CAediting_1277932 | chr19_4523053_- | UTR3 |
| CAediting_1277933 | chr19_4523059_- | UTR3 |
| CAediting_1277934 | chr19_4523149_- | UTR3 |
| CAediting_1277935 | chr19_4523156_- | UTR3 |
| CAediting_1277936 | chr19_4523171_- | UTR3 |
| CAediting_1277937 | chr19_4523192_- | UTR3 |
| CAediting_1277938 | chr19_4523198_- | UTR3 |
| CAediting_1277939 | chr19_4523206_- | UTR3 |
| CAediting_1277940 | chr19_4523214_- | UTR3 |
| CAediting_1277941 | chr19_4523216_- | UTR3 |
| CAediting_1277942 | chr19_4524307_- | ncRNA_intronic |
| CAediting_1277943 | chr19_4524335_- | ncRNA_intronic |
| CAediting_1277944 | chr19_4526234_- | intronic |
| CAediting_1277945 | chr19_4526244_- | intronic |
| CAediting_1277946 | chr19_4526255_- | intronic |
| CAediting_1277947 | chr19_4526257_- | intronic |
| CAediting_1277948 | chr19_4526259_- | intronic |
| CAediting_1277949 | chr19_4526264_- | intronic |
| CAediting_1277950 | chr19_4526269_- | intronic |
| CAediting_1277951 | chr19_4526279_- | intronic |
| CAediting_1277952 | chr19_4526294_- | intronic |
| CAediting_1277953 | chr19_4526298_- | intronic |
| CAediting_1277954 | chr19_4526307_- | intronic |
| CAediting_1277955 | chr19_4526311_- | intronic |
| CAediting_1277956 | chr19_4526319_- | intronic |
| CAediting_1277957 | chr19_4526327_- | intronic |
| CAediting_1277958 | chr19_4526333_- | intronic |
| CAediting_1277959 | chr19_4526345_- | intronic |
| CAediting_1277960 | chr19_4526350_- | intronic |
| CAediting_1277961 | chr19_4526354_- | intronic |
| CAediting_1277962 | chr19_4526385_- | intronic |
| CAediting_1277963 | chr19_4526386_- | intronic |
| CAediting_1277964 | chr19_4526392_- | intronic |
| CAediting_1277965 | chr19_4526398_- | intronic |
| CAediting_1277966 | chr19_4526415_- | intronic |
| CAediting_1277967 | chr19_4526417_- | intronic |
| CAediting_1277968 | chr19_4526425_- | intronic |
| CAediting_1277969 | chr19_4526435_- | intronic |
| CAediting_1277970 | chr19_4526438_- | intronic |
| CAediting_1277971 | chr19_4526459_- | intronic |
| CAediting_1277972 | chr19_4526462_- | intronic |
| CAediting_1277973 | chr19_4526472_- | intronic |
| CAediting_1277974 | chr19_4526477_- | intronic |
| CAediting_1277975 | chr19_4526480_- | intronic |
| CAediting_1277976 | chr19_4526485_- | intronic |
| CAediting_1277977 | chr19_4526492_- | intronic |
| CAediting_1277978 | chr19_4526493_- | intronic |
| CAediting_1277979 | chr19_4526500_- | intronic |
| CAediting_1277980 | chr19_4526502_- | intronic |
| CAediting_1277981 | chr19_4526516_- | intronic |
| CAediting_1277982 | chr19_4526524_- | intronic |
| CAediting_1277983 | chr19_4526525_- | intronic |
| CAediting_1277984 | chr19_4526531_- | intronic |
| CAediting_1277985 | chr19_4526537_- | intronic |
| CAediting_1277986 | chr19_4526581_- | intronic |
| CAediting_1277987 | chr19_4526582_- | intronic |
| CAediting_1277988 | chr19_4526584_- | intronic |
| CAediting_1277989 | chr19_4526596_- | intronic |
| CAediting_1277990 | chr19_4526597_- | intronic |
| CAediting_1277991 | chr19_4526611_- | intronic |
| CAediting_1277992 | chr19_4526619_- | intronic |
| CAediting_1277993 | chr19_4526620_- | intronic |
| CAediting_1277994 | chr19_4526623_- | intronic |
| CAediting_1277995 | chr19_4526624_- | intronic |
| CAediting_1277996 | chr19_4526651_- | intronic |
| CAediting_1277997 | chr19_4526663_- | intronic |
| CAediting_1277998 | chr19_4526678_- | intronic |
| CAediting_1277999 | chr19_4526680_- | intronic |
| CAediting_1278000 | chr19_4526682_- | intronic |
| CAediting_1278001 | chr19_4526684_- | intronic |
| CAediting_1278002 | chr19_4526695_- | intronic |
| CAediting_1278003 | chr19_4526703_- | intronic |
| CAediting_1278004 | chr19_4526704_- | intronic |
| CAediting_1278005 | chr19_4526714_- | intronic |
| CAediting_1278006 | chr19_4526734_- | intronic |
| CAediting_1278007 | chr19_4526746_- | intronic |
| CAediting_1278008 | chr19_4526758_- | intronic |
| CAediting_1278009 | chr19_4526771_- | intronic |
| CAediting_1278010 | chr19_4526776_- | intronic |
| CAediting_1278011 | chr19_4526781_- | intronic |
| CAediting_1278012 | chr19_4526801_- | intronic |
| CAediting_1278013 | chr19_4526806_- | intronic |
| CAediting_1278014 | chr19_4526811_- | intronic |
| CAediting_1278015 | chr19_4526827_- | intronic |
| CAediting_1278016 | chr19_4526832_- | intronic |
| CAediting_1278017 | chr19_4526850_- | intronic |
| CAediting_1278018 | chr19_4526854_- | intronic |
| CAediting_1278019 | chr19_4526856_- | intronic |
| CAediting_1278020 | chr19_4526978_- | intronic |
| CAediting_1278021 | chr19_4526980_- | intronic |
| CAediting_1278022 | chr19_4526992_- | intronic |
| CAediting_1278023 | chr19_4526993_- | intronic |
| CAediting_1278024 | chr19_4526994_- | intronic |
| CAediting_1278025 | chr19_4527015_- | intronic |
| CAediting_1278026 | chr19_4527019_- | intronic |
| CAediting_1278027 | chr19_4527020_- | intronic |
| CAediting_1278028 | chr19_4527069_- | intronic |
| CAediting_1278029 | chr19_4527071_- | intronic |
| CAediting_1278030 | chr19_4527148_- | intronic |
| CAediting_1278031 | chr19_4527152_- | intronic |
| CAediting_1278032 | chr19_4527159_- | intronic |
| CAediting_1278033 | chr19_4527165_- | intronic |
| CAediting_1278034 | chr19_4527172_- | intronic |
| CAediting_1278035 | chr19_4527173_- | intronic |
| CAediting_1278036 | chr19_4527181_- | intronic |
| CAediting_1278037 | chr19_4527184_- | intronic |
| CAediting_1278038 | chr19_4527191_- | intronic |
| CAediting_1278039 | chr19_4527197_- | intronic |
| CAediting_1278040 | chr19_4527200_- | intronic |
| CAediting_1278041 | chr19_4527204_- | intronic |
| CAediting_1278042 | chr19_4527208_- | intronic |
| CAediting_1278043 | chr19_4527214_- | intronic |
| CAediting_1278044 | chr19_4527243_- | intronic |
| CAediting_1278045 | chr19_4527244_- | intronic |
| CAediting_1278046 | chr19_4527246_- | intronic |
| CAediting_1278047 | chr19_4527247_- | intronic |
| CAediting_1278048 | chr19_4527250_- | intronic |
| CAediting_1278049 | chr19_4527252_- | intronic |
| CAediting_1278050 | chr19_4527253_- | intronic |
| CAediting_1278051 | chr19_4527259_- | intronic |
| CAediting_1278052 | chr19_4527270_- | intronic |
| CAediting_1278053 | chr19_4527271_- | intronic |
| CAediting_1278054 | chr19_4527306_- | intronic |
| CAediting_1278055 | chr19_4527314_- | intronic |
| CAediting_1278056 | chr19_4527344_- | intronic |
| CAediting_1278057 | chr19_4527345_- | intronic |
| CAediting_1278058 | chr19_4527353_- | intronic |
| CAediting_1278059 | chr19_4527401_- | intronic |
| CAediting_1278060 | chr19_4527407_- | intronic |
| CAediting_1278061 | chr19_4527415_- | intronic |
| CAediting_1278062 | chr19_4527417_- | intronic |
| CAediting_1278063 | chr19_4527456_- | intronic |
| CAediting_1278064 | chr19_4527457_- | intronic |
| CAediting_1278065 | chr19_4527477_- | intronic |
| CAediting_1278066 | chr19_4527492_- | intronic |
| CAediting_1278067 | chr19_4527508_- | intronic |
| CAediting_1278068 | chr19_4527525_- | intronic |
| CAediting_1278069 | chr19_4527597_- | intronic |
| CAediting_1278070 | chr19_4527600_- | intronic |
| CAediting_1278071 | chr19_4527612_- | intronic |
| CAediting_1278072 | chr19_4527613_- | intronic |
| CAediting_1278073 | chr19_4527614_- | intronic |
| CAediting_1278074 | chr19_4527679_- | intronic |
| CAediting_1278075 | chr19_4527682_- | intronic |
| CAediting_1278076 | chr19_4527686_- | intronic |
| CAediting_1278077 | chr19_4527696_- | intronic |
| CAediting_1278078 | chr19_4527705_- | intronic |
| CAediting_1278079 | chr19_4527707_- | intronic |
| CAediting_1278080 | chr19_4527713_- | intronic |
| CAediting_1278081 | chr19_4527717_- | intronic |
| CAediting_1278082 | chr19_4527721_- | intronic |
| CAediting_1278083 | chr19_4527723_- | intronic |
| CAediting_1278084 | chr19_4527733_- | intronic |
| CAediting_1278085 | chr19_4527737_- | intronic |
| CAediting_1278086 | chr19_4527745_- | intronic |
| CAediting_1278087 | chr19_4527758_- | intronic |
| CAediting_1278088 | chr19_4527762_- | intronic |
| CAediting_1278089 | chr19_4527763_- | intronic |
| CAediting_1278090 | chr19_4527783_- | intronic |
| CAediting_1278091 | chr19_4527785_- | intronic |
| CAediting_1278092 | chr19_4527793_- | intronic |
| CAediting_1278093 | chr19_4527798_- | intronic |
| CAediting_1278094 | chr19_4527812_- | intronic |
| CAediting_1278095 | chr19_4527819_- | intronic |
| CAediting_1278096 | chr19_4527831_- | intronic |
| CAediting_1278097 | chr19_4527838_- | intronic |
| CAediting_1278098 | chr19_4527841_- | intronic |
| CAediting_1278099 | chr19_4527945_- | intronic |
| CAediting_1278100 | chr19_4527977_- | intronic |
| CAediting_1278101 | chr19_4527982_- | intronic |
| CAediting_1278102 | chr19_4527986_- | intronic |
| CAediting_1278103 | chr19_4528015_- | intronic |
| CAediting_1278104 | chr19_4528025_- | intronic |
| CAediting_1278105 | chr19_4528074_- | intronic |
| CAediting_1278106 | chr19_4528077_- | intronic |
| CAediting_1278107 | chr19_4528078_- | intronic |
| CAediting_1278108 | chr19_4528080_- | intronic |
| CAediting_1278109 | chr19_4528081_- | intronic |
| CAediting_1278110 | chr19_4528084_- | intronic |
| CAediting_1278111 | chr19_4528087_- | intronic |
| CAediting_1278112 | chr19_4528104_- | intronic |
| CAediting_1278113 | chr19_4528138_- | intronic |
| CAediting_1278114 | chr19_4528176_- | intronic |
| CAediting_1278115 | chr19_4528181_- | intronic |
| CAediting_1278116 | chr19_4528190_- | intronic |
| CAediting_1278117 | chr19_4528438_- | UTR3 |
| CAediting_1278118 | chr19_4528451_- | UTR3 |
| CAediting_1278119 | chr19_4528485_- | UTR3 |
| CAediting_1278120 | chr19_4528506_- | UTR3 |
| CAediting_1278121 | chr19_4528514_- | UTR3 |
| CAediting_1278122 | chr19_4528515_- | UTR3 |
| CAediting_1278123 | chr19_4528517_- | UTR3 |
| CAediting_1278124 | chr19_4528537_- | UTR3 |
| CAediting_1278125 | chr19_4528541_- | UTR3 |
| CAediting_1278126 | chr19_4528547_- | UTR3 |
| CAediting_1278127 | chr19_4528573_- | UTR3 |
| CAediting_1278128 | chr19_4528576_- | UTR3 |
| CAediting_1278129 | chr19_4528578_- | UTR3 |
| CAediting_1278130 | chr19_4528579_- | UTR3 |
| CAediting_1278131 | chr19_4528580_- | UTR3 |
| CAediting_1278132 | chr19_4528583_- | UTR3 |
| CAediting_1278133 | chr19_4528586_- | UTR3 |
| CAediting_1278134 | chr19_4528613_- | UTR3 |
| CAediting_1278135 | chr19_4528658_- | UTR3 |
| CAediting_1278136 | chr19_4528680_- | UTR3 |
| CAediting_1278137 | chr19_4528681_- | UTR3 |
| CAediting_1278138 | chr19_4528697_- | UTR3 |
| CAediting_1278139 | chr19_4528699_- | UTR3 |
| CAediting_1278140 | chr19_4528703_- | UTR3 |
| CAediting_1278141 | chr19_4530778_- | ncRNA_intronic |
| CAediting_1278142 | chr19_4532581_- | ncRNA_intronic |
| CAediting_1278143 | chr19_4532789_- | ncRNA_intronic |
| CAediting_1278144 | chr19_4532790_- | ncRNA_intronic |
| CAediting_1278145 | chr19_4533027_- | ncRNA_intronic |
| CAediting_1278146 | chr19_4533314_- | ncRNA_intronic |
| Repat-regional RNA editing(s). |
| CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| CAediting_1277912 | chr19_4522748_- | SINE | Alu | AluJr |
| CAediting_1277913 | chr19_4522772_- | SINE | Alu | AluJr |
| CAediting_1277914 | chr19_4522775_- | SINE | Alu | AluJr |
| CAediting_1277915 | chr19_4522780_- | SINE | Alu | AluJr |
| CAediting_1277916 | chr19_4522799_- | SINE | Alu | AluJr |
| CAediting_1277917 | chr19_4522820_- | SINE | Alu | AluJr |
| CAediting_1277918 | chr19_4522827_- | SINE | Alu | AluJr |
| CAediting_1277919 | chr19_4522946_- | SINE | Alu | AluSx |
| CAediting_1277920 | chr19_4522960_- | SINE | Alu | AluSx |
| CAediting_1277921 | chr19_4522970_- | SINE | Alu | AluSx |
| CAediting_1277922 | chr19_4522982_- | SINE | Alu | AluSx |
| CAediting_1277923 | chr19_4522985_- | SINE | Alu | AluSx |
| CAediting_1277924 | chr19_4522989_- | SINE | Alu | AluSx |
| CAediting_1277925 | chr19_4523006_- | SINE | Alu | AluSx |
| CAediting_1277926 | chr19_4523012_- | SINE | Alu | AluSx |
| CAediting_1277927 | chr19_4523013_- | SINE | Alu | AluSx |
| CAediting_1277928 | chr19_4523020_- | SINE | Alu | AluSx |
| CAediting_1277929 | chr19_4523036_- | SINE | Alu | AluSx |
| CAediting_1277930 | chr19_4523043_- | SINE | Alu | AluSx |
| CAediting_1277931 | chr19_4523047_- | SINE | Alu | AluSx |
| CAediting_1277932 | chr19_4523053_- | SINE | Alu | AluSx |
| CAediting_1277933 | chr19_4523059_- | SINE | Alu | AluSx |
| CAediting_1277934 | chr19_4523149_- | SINE | Alu | AluSx |
| CAediting_1277935 | chr19_4523156_- | SINE | Alu | AluSx |
| CAediting_1277936 | chr19_4523171_- | SINE | Alu | AluSx |
| CAediting_1277937 | chr19_4523192_- | SINE | Alu | AluSx |
| CAediting_1277938 | chr19_4523198_- | SINE | Alu | AluSx |
| CAediting_1277939 | chr19_4523206_- | SINE | Alu | AluSx |
| CAediting_1277940 | chr19_4523214_- | SINE | Alu | AluSx |
| CAediting_1277941 | chr19_4523216_- | SINE | Alu | AluSx |
| CAediting_1277942 | chr19_4524307_- | SINE | Alu | AluSx1 |
| CAediting_1277943 | chr19_4524335_- | SINE | Alu | AluSx1 |
| CAediting_1277944 | chr19_4526234_- | SINE | Alu | AluSz |
| CAediting_1277945 | chr19_4526244_- | SINE | Alu | AluSz |
| CAediting_1277946 | chr19_4526255_- | SINE | Alu | AluSz |
| CAediting_1277947 | chr19_4526257_- | SINE | Alu | AluSz |
| CAediting_1277948 | chr19_4526259_- | SINE | Alu | AluSz |
| CAediting_1277949 | chr19_4526264_- | SINE | Alu | AluSz |
| CAediting_1277950 | chr19_4526269_- | SINE | Alu | AluSz |
| CAediting_1277951 | chr19_4526279_- | SINE | Alu | AluSz |
| CAediting_1277952 | chr19_4526294_- | SINE | Alu | AluSz |
| CAediting_1277953 | chr19_4526298_- | SINE | Alu | AluSz |
| CAediting_1277954 | chr19_4526307_- | SINE | Alu | AluSz |
| CAediting_1277955 | chr19_4526311_- | SINE | Alu | AluSz |
| CAediting_1277956 | chr19_4526319_- | SINE | Alu | AluSz |
| CAediting_1277957 | chr19_4526327_- | SINE | Alu | AluSz |
| CAediting_1277958 | chr19_4526333_- | SINE | Alu | AluSz |
| CAediting_1277959 | chr19_4526345_- | SINE | Alu | AluSz |
| CAediting_1277960 | chr19_4526350_- | SINE | Alu | AluSz |
| CAediting_1277961 | chr19_4526354_- | SINE | Alu | AluSz |
| CAediting_1277962 | chr19_4526385_- | SINE | Alu | AluSz |
| CAediting_1277963 | chr19_4526386_- | SINE | Alu | AluSz |
| CAediting_1277964 | chr19_4526392_- | SINE | Alu | AluSz |
| CAediting_1277965 | chr19_4526398_- | SINE | Alu | AluSz |
| CAediting_1277966 | chr19_4526415_- | SINE | Alu | AluSz |
| CAediting_1277967 | chr19_4526417_- | SINE | Alu | AluSz |
| CAediting_1277968 | chr19_4526425_- | SINE | Alu | AluSz |
| CAediting_1277969 | chr19_4526435_- | SINE | Alu | AluSz |
| CAediting_1277970 | chr19_4526438_- | SINE | Alu | AluSz |
| CAediting_1277971 | chr19_4526459_- | SINE | Alu | AluSz |
| CAediting_1277972 | chr19_4526462_- | SINE | Alu | AluSz |
| CAediting_1277973 | chr19_4526472_- | SINE | Alu | AluSz |
| CAediting_1277974 | chr19_4526477_- | SINE | Alu | AluSz |
| CAediting_1277975 | chr19_4526480_- | SINE | Alu | AluSz |
| CAediting_1277976 | chr19_4526485_- | SINE | Alu | AluSz |
| CAediting_1277977 | chr19_4526492_- | SINE | Alu | AluSz |
| CAediting_1277978 | chr19_4526493_- | SINE | Alu | AluSz |
| CAediting_1277979 | chr19_4526500_- | SINE | Alu | AluSz |
| CAediting_1277980 | chr19_4526502_- | SINE | Alu | AluSz |
| CAediting_1277981 | chr19_4526516_- | SINE | Alu | AluSz |
| CAediting_1277982 | chr19_4526524_- | SINE | MIR | MIR3 |
| CAediting_1277983 | chr19_4526525_- | SINE | MIR | MIR3 |
| CAediting_1277984 | chr19_4526531_- | SINE | MIR | MIR3 |
| CAediting_1277986 | chr19_4526581_- | SINE | Alu | AluJo |
| CAediting_1277987 | chr19_4526582_- | SINE | Alu | AluJo |
| CAediting_1277988 | chr19_4526584_- | SINE | Alu | AluJo |
| CAediting_1277989 | chr19_4526596_- | SINE | Alu | AluJo |
| CAediting_1277990 | chr19_4526597_- | SINE | Alu | AluJo |
| CAediting_1277991 | chr19_4526611_- | SINE | Alu | AluJo |
| CAediting_1277992 | chr19_4526619_- | SINE | Alu | AluJo |
| CAediting_1277993 | chr19_4526620_- | SINE | Alu | AluJo |
| CAediting_1277994 | chr19_4526623_- | SINE | Alu | AluJo |
| CAediting_1277995 | chr19_4526624_- | SINE | Alu | AluJo |
| CAediting_1277996 | chr19_4526651_- | SINE | Alu | AluJo |
| CAediting_1277997 | chr19_4526663_- | SINE | Alu | AluJo |
| CAediting_1277998 | chr19_4526678_- | SINE | Alu | AluJo |
| CAediting_1277999 | chr19_4526680_- | SINE | Alu | AluJo |
| CAediting_1278000 | chr19_4526682_- | SINE | Alu | AluJo |
| CAediting_1278001 | chr19_4526684_- | SINE | Alu | AluJo |
| CAediting_1278002 | chr19_4526695_- | SINE | Alu | AluJo |
| CAediting_1278003 | chr19_4526703_- | SINE | Alu | AluJo |
| CAediting_1278004 | chr19_4526704_- | SINE | Alu | AluJo |
| CAediting_1278005 | chr19_4526714_- | SINE | Alu | AluJo |
| CAediting_1278006 | chr19_4526734_- | SINE | Alu | AluJo |
| CAediting_1278007 | chr19_4526746_- | SINE | Alu | AluJo |
| CAediting_1278008 | chr19_4526758_- | SINE | Alu | AluJo |
| CAediting_1278009 | chr19_4526771_- | SINE | Alu | AluJo |
| CAediting_1278010 | chr19_4526776_- | SINE | Alu | AluJo |
| CAediting_1278011 | chr19_4526781_- | SINE | Alu | AluJo |
| CAediting_1278012 | chr19_4526801_- | SINE | Alu | AluJo |
| CAediting_1278013 | chr19_4526806_- | SINE | Alu | AluJo |
| CAediting_1278014 | chr19_4526811_- | SINE | Alu | AluJo |
| CAediting_1278015 | chr19_4526827_- | SINE | Alu | AluJo |
| CAediting_1278016 | chr19_4526832_- | SINE | Alu | AluJo |
| CAediting_1278017 | chr19_4526850_- | SINE | Alu | AluJo |
| CAediting_1278018 | chr19_4526854_- | SINE | Alu | AluJo |
| CAediting_1278019 | chr19_4526856_- | SINE | Alu | AluJo |
| CAediting_1278020 | chr19_4526978_- | SINE | Alu | AluJo |
| CAediting_1278021 | chr19_4526980_- | SINE | Alu | AluJo |
| CAediting_1278022 | chr19_4526992_- | SINE | Alu | AluJo |
| CAediting_1278023 | chr19_4526993_- | SINE | Alu | AluJo |
| CAediting_1278024 | chr19_4526994_- | SINE | Alu | AluJo |
| CAediting_1278025 | chr19_4527015_- | SINE | Alu | AluJo |
| CAediting_1278026 | chr19_4527019_- | SINE | Alu | AluJo |
| CAediting_1278027 | chr19_4527020_- | SINE | Alu | AluJo |
| CAediting_1278028 | chr19_4527069_- | SINE | Alu | AluJo |
| CAediting_1278029 | chr19_4527071_- | SINE | Alu | AluJo |
| CAediting_1278030 | chr19_4527148_- | SINE | Alu | AluY |
| CAediting_1278031 | chr19_4527152_- | SINE | Alu | AluY |
| CAediting_1278032 | chr19_4527159_- | SINE | Alu | AluY |
| CAediting_1278033 | chr19_4527165_- | SINE | Alu | AluY |
| CAediting_1278034 | chr19_4527172_- | SINE | Alu | AluY |
| CAediting_1278035 | chr19_4527173_- | SINE | Alu | AluY |
| CAediting_1278036 | chr19_4527181_- | SINE | Alu | AluY |
| CAediting_1278037 | chr19_4527184_- | SINE | Alu | AluY |
| CAediting_1278038 | chr19_4527191_- | SINE | Alu | AluY |
| CAediting_1278039 | chr19_4527197_- | SINE | Alu | AluY |
| CAediting_1278040 | chr19_4527200_- | SINE | Alu | AluY |
| CAediting_1278041 | chr19_4527204_- | SINE | Alu | AluY |
| CAediting_1278042 | chr19_4527208_- | SINE | Alu | AluY |
| CAediting_1278043 | chr19_4527214_- | SINE | Alu | AluY |
| CAediting_1278044 | chr19_4527243_- | SINE | Alu | AluY |
| CAediting_1278045 | chr19_4527244_- | SINE | Alu | AluY |
| CAediting_1278046 | chr19_4527246_- | SINE | Alu | AluY |
| CAediting_1278047 | chr19_4527247_- | SINE | Alu | AluY |
| CAediting_1278048 | chr19_4527250_- | SINE | Alu | AluY |
| CAediting_1278049 | chr19_4527252_- | SINE | Alu | AluY |
| CAediting_1278050 | chr19_4527253_- | SINE | Alu | AluY |
| CAediting_1278051 | chr19_4527259_- | SINE | Alu | AluY |
| CAediting_1278052 | chr19_4527270_- | SINE | Alu | AluY |
| CAediting_1278053 | chr19_4527271_- | SINE | Alu | AluY |
| CAediting_1278054 | chr19_4527306_- | SINE | Alu | AluY |
| CAediting_1278055 | chr19_4527314_- | SINE | Alu | AluY |
| CAediting_1278056 | chr19_4527344_- | SINE | Alu | AluY |
| CAediting_1278057 | chr19_4527345_- | SINE | Alu | AluY |
| CAediting_1278058 | chr19_4527353_- | SINE | Alu | AluY |
| CAediting_1278059 | chr19_4527401_- | SINE | Alu | AluJo |
| CAediting_1278060 | chr19_4527407_- | SINE | Alu | AluJo |
| CAediting_1278061 | chr19_4527415_- | SINE | Alu | AluJo |
| CAediting_1278062 | chr19_4527417_- | SINE | Alu | AluJo |
| CAediting_1278063 | chr19_4527456_- | SINE | Alu | AluJo |
| CAediting_1278064 | chr19_4527457_- | SINE | Alu | AluJo |
| CAediting_1278065 | chr19_4527477_- | SINE | Alu | AluJo |
| CAediting_1278066 | chr19_4527492_- | SINE | Alu | AluJo |
| CAediting_1278067 | chr19_4527508_- | SINE | Alu | AluJo |
| CAediting_1278068 | chr19_4527525_- | SINE | Alu | AluJo |
| CAediting_1278069 | chr19_4527597_- | SINE | Alu | AluSx1 |
| CAediting_1278070 | chr19_4527600_- | SINE | Alu | AluSx1 |
| CAediting_1278071 | chr19_4527612_- | SINE | Alu | AluSx1 |
| CAediting_1278072 | chr19_4527613_- | SINE | Alu | AluSx1 |
| CAediting_1278073 | chr19_4527614_- | SINE | Alu | AluSx1 |
| CAediting_1278074 | chr19_4527679_- | SINE | Alu | AluSx1 |
| CAediting_1278075 | chr19_4527682_- | SINE | Alu | AluSx1 |
| CAediting_1278076 | chr19_4527686_- | SINE | Alu | AluSx1 |
| CAediting_1278077 | chr19_4527696_- | SINE | Alu | AluSx1 |
| CAediting_1278078 | chr19_4527705_- | SINE | Alu | AluSx1 |
| CAediting_1278079 | chr19_4527707_- | SINE | Alu | AluSx1 |
| CAediting_1278080 | chr19_4527713_- | SINE | Alu | AluSx1 |
| CAediting_1278081 | chr19_4527717_- | SINE | Alu | AluSx1 |
| CAediting_1278082 | chr19_4527721_- | SINE | Alu | AluSx1 |
| CAediting_1278083 | chr19_4527723_- | SINE | Alu | AluSx1 |
| CAediting_1278084 | chr19_4527733_- | SINE | Alu | AluSx1 |
| CAediting_1278085 | chr19_4527737_- | SINE | Alu | AluSx1 |
| CAediting_1278086 | chr19_4527745_- | SINE | Alu | AluSx1 |
| CAediting_1278087 | chr19_4527758_- | SINE | Alu | AluSx1 |
| CAediting_1278088 | chr19_4527762_- | SINE | Alu | AluSx1 |
| CAediting_1278089 | chr19_4527763_- | SINE | Alu | AluSx1 |
| CAediting_1278090 | chr19_4527783_- | SINE | Alu | AluSx1 |
| CAediting_1278091 | chr19_4527785_- | SINE | Alu | AluSx1 |
| CAediting_1278092 | chr19_4527793_- | SINE | Alu | AluSx1 |
| CAediting_1278093 | chr19_4527798_- | SINE | Alu | AluSx1 |
| CAediting_1278094 | chr19_4527812_- | SINE | Alu | AluSx1 |
| CAediting_1278095 | chr19_4527819_- | SINE | Alu | AluSx1 |
| CAediting_1278096 | chr19_4527831_- | SINE | Alu | AluSx1 |
| CAediting_1278097 | chr19_4527838_- | SINE | Alu | AluSx1 |
| CAediting_1278098 | chr19_4527841_- | SINE | Alu | AluSx1 |
| CAediting_1278099 | chr19_4527945_- | SINE | Alu | AluYm1 |
| CAediting_1278100 | chr19_4527977_- | SINE | Alu | AluYm1 |
| CAediting_1278101 | chr19_4527982_- | SINE | Alu | AluYm1 |
| CAediting_1278102 | chr19_4527986_- | SINE | Alu | AluYm1 |
| CAediting_1278103 | chr19_4528015_- | SINE | Alu | AluYm1 |
| CAediting_1278104 | chr19_4528025_- | SINE | Alu | AluYm1 |
| CAediting_1278105 | chr19_4528074_- | SINE | Alu | AluYm1 |
| CAediting_1278106 | chr19_4528077_- | SINE | Alu | AluYm1 |
| CAediting_1278107 | chr19_4528078_- | SINE | Alu | AluYm1 |
| CAediting_1278108 | chr19_4528080_- | SINE | Alu | AluYm1 |
| CAediting_1278109 | chr19_4528081_- | SINE | Alu | AluYm1 |
| CAediting_1278110 | chr19_4528084_- | SINE | Alu | AluYm1 |
| CAediting_1278111 | chr19_4528087_- | SINE | Alu | AluYm1 |
| CAediting_1278112 | chr19_4528104_- | SINE | Alu | AluYm1 |
| CAediting_1278113 | chr19_4528138_- | SINE | Alu | AluYm1 |
| CAediting_1278114 | chr19_4528176_- | SINE | Alu | AluYm1 |
| CAediting_1278115 | chr19_4528181_- | SINE | Alu | AluYm1 |
| CAediting_1278116 | chr19_4528190_- | SINE | Alu | AluYm1 |
| CAediting_1278117 | chr19_4528438_- | SINE | Alu | AluSx3 |
| CAediting_1278118 | chr19_4528451_- | SINE | Alu | AluSx3 |
| CAediting_1278119 | chr19_4528485_- | SINE | Alu | AluSx3 |
| CAediting_1278120 | chr19_4528506_- | SINE | Alu | AluSx3 |
| CAediting_1278121 | chr19_4528514_- | SINE | Alu | AluSx3 |
| CAediting_1278122 | chr19_4528515_- | SINE | Alu | AluSx3 |
| CAediting_1278123 | chr19_4528517_- | SINE | Alu | AluSx3 |
| CAediting_1278124 | chr19_4528537_- | SINE | Alu | AluSx3 |
| CAediting_1278125 | chr19_4528541_- | SINE | Alu | AluSx3 |
| CAediting_1278126 | chr19_4528547_- | SINE | Alu | AluSx3 |
| CAediting_1278127 | chr19_4528573_- | SINE | Alu | AluSx3 |
| CAediting_1278128 | chr19_4528576_- | SINE | Alu | AluSx3 |
| CAediting_1278129 | chr19_4528578_- | SINE | Alu | AluSx3 |
| CAediting_1278130 | chr19_4528579_- | SINE | Alu | AluSx3 |
| CAediting_1278131 | chr19_4528580_- | SINE | Alu | AluSx3 |
| CAediting_1278132 | chr19_4528583_- | SINE | Alu | AluSx3 |
| CAediting_1278133 | chr19_4528586_- | SINE | Alu | AluSx3 |
| CAediting_1278134 | chr19_4528613_- | SINE | Alu | AluSx3 |
| CAediting_1278135 | chr19_4528658_- | SINE | Alu | AluSx3 |
| CAediting_1278136 | chr19_4528680_- | SINE | Alu | AluSx3 |
| CAediting_1278137 | chr19_4528681_- | SINE | Alu | AluSx3 |
| CAediting_1278138 | chr19_4528697_- | SINE | Alu | AluSx3 |
| CAediting_1278139 | chr19_4528699_- | SINE | Alu | AluSx3 |
| CAediting_1278140 | chr19_4528703_- | SINE | Alu | AluSx3 |
| CAediting_1278141 | chr19_4530778_- | SINE | Alu | AluSx1 |
| CAediting_1278142 | chr19_4532581_- | SINE | Alu | AluSq2 |
| CAediting_1278143 | chr19_4532789_- | SINE | Alu | AluJr |
| CAediting_1278144 | chr19_4532790_- | SINE | Alu | AluJr |
| CAediting_1278145 | chr19_4533027_- | SINE | Alu | AluSx |
| CAediting_1278146 | chr19_4533314_- | SINE | Alu | AluSq |
Top |
RNA A-to-I editing events in the alternative splicing sites for PLIN5 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000214456.7.PLIN5. |
| Correlation between RNA A-to-I editing and PSI for ENSG00000214456.7.PLIN5. |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for PLIN5 |
| Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
 | |
| Correlation between RNA A-to-I editing and gene expression. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
PRAD.CAediting_1277975.ENSG00000214456.PLIN5.png  |
PRAD.CAediting_1278015.ENSG00000214456.PLIN5.png  |
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Protein coding region RNA A-to-I editings for PLIN5 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for PLIN5 |
| **If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| CAediting_1277918 | chr19_4522827_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-3186-5p | 4522824 | 4522830 | 7mer-m8 | 4522823 | 4522844 | 148.00 | -23.09 |
| CAediting_1277927 | chr19_4523013_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-498-5p | 4523011 | 4523017 | 7mer-m8 | 4523010 | 4523032 | 142.00 | -12.98 |
| CAediting_1277930 | chr19_4523043_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-1207-3p | 4523043 | 4523049 | 7mer-m8 | 4523042 | 4523060 | 145.00 | -15.31 |
| CAediting_1277935 | chr19_4523156_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4330 | 4523156 | 4523162 | 7mer-m8 | 4523155 | 4523171 | 144.00 | -17.72 |
| CAediting_1277912 | chr19_4522748_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-548ao-3p | 4522744 | 4522749 | 6mer | 4522743 | 4522765 | 147.00 | -20.55 |
| CAediting_1277912 | chr19_4522748_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-591 | 4522746 | 4522752 | 7mer-m8 | 4522745 | 4522761 | 154.00 | -26.16 |
| CAediting_1277912 | chr19_4522748_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6502-3p | 4522745 | 4522751 | 7mer-m8 | 4522744 | 4522766 | 150.00 | -14.31 |
| CAediting_1277912 | chr19_4522748_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-7153-3p | 4522747 | 4522753 | 7mer-m8 | 4522746 | 4522763 | 140.00 | -13.03 |
| CAediting_1277915 | chr19_4522780_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-3136-3p | 4522777 | 4522783 | 7mer-m8 | 4522776 | 4522797 | 148.00 | -16.28 |
| CAediting_1277915 | chr19_4522780_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6724-5p | 4522775 | 4522781 | 7mer-m8 | 4522774 | 4522795 | 153.00 | -28.05 |
| CAediting_1277915 | chr19_4522780_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6724-5p | 4522775 | 4522781 | 7mer-m8 | 4522774 | 4522795 | 153.00 | -28.05 |
| CAediting_1277915 | chr19_4522780_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6724-5p | 4522775 | 4522781 | 7mer-m8 | 4522774 | 4522795 | 153.00 | -28.05 |
| CAediting_1277915 | chr19_4522780_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6724-5p | 4522775 | 4522781 | 7mer-m8 | 4522774 | 4522795 | 153.00 | -28.05 |
| CAediting_1277915 | chr19_4522780_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6773-5p | 4522775 | 4522781 | 7mer-m8 | 4522774 | 4522797 | 157.00 | -26.06 |
| CAediting_1277915 | chr19_4522780_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-7155-3p | 4522777 | 4522783 | 7mer-m8 | 4522776 | 4522797 | 148.00 | -27.47 |
| CAediting_1277917 | chr19_4522820_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4504 | 4522815 | 4522822 | 8mer-1a | 4522815 | 4522836 | 159.00 | -18.77 |
| CAediting_1277919 | chr19_4522946_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-339-5p | 4522945 | 4522951 | 7mer-m8 | 4522944 | 4522966 | 163.00 | -27.89 |
| CAediting_1277919 | chr19_4522946_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6726-3p | 4522942 | 4522948 | 7mer-m8 | 4522941 | 4522962 | 169.00 | -33.86 |
| CAediting_1277925 | chr19_4523006_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6778-3p | 4523001 | 4523007 | 7mer-m8 | 4523000 | 4523020 | 142.00 | -17.12 |
| CAediting_1277928 | chr19_4523020_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-891b | 4523016 | 4523021 | 6mer | 4523015 | 4523036 | 150.00 | -17.06 |
| CAediting_1277929 | chr19_4523036_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4323 | 4523032 | 4523038 | 7mer-m8 | 4523031 | 4523048 | 156.00 | -25.94 |
| CAediting_1277929 | chr19_4523036_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4758-3p | 4523033 | 4523039 | 7mer-m8 | 4523032 | 4523059 | 152.00 | -20.47 |
| CAediting_1277933 | chr19_4523059_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6722-5p | 4523057 | 4523063 | 7mer-m8 | 4523056 | 4523075 | 170.00 | -30.84 |
| CAediting_1277934 | chr19_4523149_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4732-3p | 4523149 | 4523155 | 7mer-m8 | 4523148 | 4523168 | 147.00 | -14.89 |
| CAediting_1277939 | chr19_4523206_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4634 | 4523202 | 4523208 | 7mer-m8 | 4523201 | 4523224 | 147.00 | -29.32 |
| CAediting_1278142 | chr19_4532581_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-4726-3p | 4532580 | 4532586 | 7mer-m8 | 4532579 | 4532602 | 149.00 | -23.42 |
| CAediting_1278143 | chr19_4532789_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-2115-5p | 4532788 | 4532794 | 7mer-m8 | 4532787 | 4532809 | 150.00 | -21.64 |
| CAediting_1278143 | chr19_4532789_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-6787-3p | 4532784 | 4532790 | 7mer-m8 | 4532783 | 4532804 | 144.00 | -19.27 |
| CAediting_1278144 | chr19_4532790_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-515-5p | 4532789 | 4532795 | 7mer-m8 | 4532788 | 4532811 | 140.00 | -11.68 |
| CAediting_1278144 | chr19_4532790_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-515-5p | 4532789 | 4532795 | 7mer-m8 | 4532788 | 4532811 | 140.00 | -11.68 |
| CAediting_1278144 | chr19_4532790_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-519e-5p | 4532789 | 4532795 | 7mer-m8 | 4532788 | 4532809 | 140.00 | -13.89 |
| CAediting_1278144 | chr19_4532790_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-5695 | 4532789 | 4532796 | 8mer-1a | 4532789 | 4532810 | 142.00 | -13.09 |
| CAediting_1277913 | chr19_4522772_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-331-3p | 4522771 | 4522777 | 7mer-m8 | 4522770 | 4522790 | 153.00 | -25.72 |
| CAediting_1277913 | chr19_4522772_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4292 | 4522772 | 4522778 | 7mer-m8 | 4522771 | 4522788 | 145.00 | -25.13 |
| CAediting_1277913 | chr19_4522772_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6791-5p | 4522772 | 4522778 | 7mer-m8 | 4522771 | 4522792 | 159.00 | -31.14 |
| CAediting_1277922 | chr19_4522982_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-572 | 4522980 | 4522986 | 7mer-m8 | 4522979 | 4522998 | 145.00 | -20.72 |
| CAediting_1277923 | chr19_4522985_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-324-3p | 4522985 | 4522991 | 7mer-m8 | 4522984 | 4523003 | 148.00 | -24.49 |
| CAediting_1277923 | chr19_4522985_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-5001-3p | 4522980 | 4522985 | 6mer | 4522979 | 4523000 | 145.00 | -22.94 |
| CAediting_1277924 | chr19_4522989_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6784-3p | 4522984 | 4522989 | 6mer | 4522983 | 4523005 | 147.00 | -26.57 |
| CAediting_1277937 | chr19_4523192_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-371a-3p | 4523187 | 4523193 | 7mer-m8 | 4523186 | 4523208 | 145.00 | -17.36 |
| CAediting_1277938 | chr19_4523198_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-513a-5p | 4523197 | 4523203 | 7mer-m8 | 4523196 | 4523213 | 144.00 | -16.68 |
| CAediting_1277938 | chr19_4523198_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-513a-5p | 4523197 | 4523203 | 7mer-m8 | 4523196 | 4523213 | 144.00 | -16.68 |
| CAediting_1277938 | chr19_4523198_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-638 | 4523192 | 4523198 | 7mer-1a | 4523192 | 4523216 | 157.00 | -32.92 |
| CAediting_1278146 | chr19_4533314_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-4281 | 4533309 | 4533316 | 8mer-1a | 4533309 | 4533326 | 142.00 | -19.48 |
| CAediting_1278146 | chr19_4533314_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-6716-3p | 4533314 | 4533320 | 7mer-m8 | 4533313 | 4533332 | 152.00 | -24.73 |
| CAediting_1278146 | chr19_4533314_- | ENSG00000214456.7 | ENST00000586133 | hsa-miR-4281 | 4533309 | 4533316 | 8mer-1a | 4533309 | 4533326 | 142.00 | -19.48 |
| CAediting_1278146 | chr19_4533314_- | ENSG00000214456.7 | ENST00000586133 | hsa-miR-6716-3p | 4533314 | 4533320 | 7mer-m8 | 4533313 | 4533332 | 152.00 | -24.73 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| CAediting_1277938 | chr19_4523198_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-10399-5p | 4523196 | 4523202 | 7mer-m8 | 4523195 | 4523216 | 144 | -10.39 |
| CAediting_1277914 | chr19_4522775_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-10400-3p | 4522775 | 4522781 | 7mer-m8 | 4522774 | 4522795 | 141 | -22.68 |
| CAediting_1277915 | chr19_4522780_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-10400-3p | 4522775 | 4522781 | 7mer-m8 | 4522774 | 4522795 | 141 | -22.68 |
| CAediting_1277922 | chr19_4522982_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-1178-3p | 4522982 | 4522988 | 7mer-m8 | 4522981 | 4523003 | 153 | -22.86 |
| CAediting_1277923 | chr19_4522985_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-1178-3p | 4522982 | 4522988 | 7mer-m8 | 4522981 | 4523003 | 153 | -22.86 |
| CAediting_1277913 | chr19_4522772_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-1343-3p | 4522772 | 4522778 | 7mer-m8 | 4522771 | 4522793 | 150 | -26.73 |
| CAediting_1277914 | chr19_4522775_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-1343-3p | 4522772 | 4522778 | 7mer-m8 | 4522771 | 4522793 | 150 | -26.73 |
| CAediting_1277920 | chr19_4522960_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-138-5p | 4522958 | 4522964 | 7mer-m8 | 4522957 | 4522979 | 145 | -20.3 |
| CAediting_1277920 | chr19_4522960_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-138-5p | 4522958 | 4522964 | 7mer-m8 | 4522957 | 4522979 | 145 | -20.3 |
| CAediting_1277924 | chr19_4522989_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-2276-3p | 4522988 | 4522994 | 7mer-m8 | 4522987 | 4523007 | 148 | -17.63 |
| CAediting_1277912 | chr19_4522748_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-2681-3p | 4522747 | 4522753 | 7mer-m8 | 4522746 | 4522766 | 146 | -15.33 |
| CAediting_1277925 | chr19_4523006_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-3615 | 4523003 | 4523009 | 7mer-m8 | 4523002 | 4523022 | 142 | -19.86 |
| CAediting_1277918 | chr19_4522827_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-3934-5p | 4522823 | 4522829 | 7mer-m8 | 4522822 | 4522843 | 143 | -16.98 |
| CAediting_1277935 | chr19_4523156_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-3942-3p | 4523156 | 4523162 | 7mer-m8 | 4523155 | 4523175 | 142 | -9.61 |
| CAediting_1277940 | chr19_4523214_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4252 | 4523209 | 4523215 | 7mer-m8 | 4523208 | 4523227 | 154 | -22.32 |
| CAediting_1277924 | chr19_4522989_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4418 | 4522987 | 4522992 | 6mer | 4522986 | 4523002 | 142 | -21.64 |
| CAediting_1277915 | chr19_4522780_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4437 | 4522775 | 4522782 | 8mer-1a | 4522775 | 4522795 | 146 | -19.59 |
| CAediting_1277926 | chr19_4523012_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4503 | 4523011 | 4523018 | 8mer-1a | 4523011 | 4523032 | 141 | -9.36 |
| CAediting_1277927 | chr19_4523013_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4503 | 4523011 | 4523018 | 8mer-1a | 4523011 | 4523032 | 141 | -9.36 |
| CAediting_1277928 | chr19_4523020_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4659a-3p | 4523020 | 4523026 | 7mer-m8 | 4523019 | 4523043 | 147 | -14.73 |
| CAediting_1277928 | chr19_4523020_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4659b-3p | 4523020 | 4523026 | 7mer-m8 | 4523019 | 4523040 | 146 | -12.71 |
| CAediting_1277930 | chr19_4523043_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4661-5p | 4523041 | 4523047 | 7mer-m8 | 4523040 | 4523065 | 141 | -14.33 |
| CAediting_1277914 | chr19_4522775_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4674 | 4522775 | 4522781 | 7mer-m8 | 4522774 | 4522794 | 147 | -23.74 |
| CAediting_1277915 | chr19_4522780_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4674 | 4522775 | 4522781 | 7mer-m8 | 4522774 | 4522794 | 147 | -23.74 |
| CAediting_1277934 | chr19_4523149_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-4680-5p | 4523145 | 4523150 | 6mer | 4523144 | 4523164 | 149 | -20.37 |
| CAediting_1277937 | chr19_4523192_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-5089-5p | 4523192 | 4523198 | 7mer-m8 | 4523191 | 4523213 | 148 | -14.13 |
| CAediting_1277937 | chr19_4523192_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-512-3p | 4523187 | 4523193 | 7mer-m8 | 4523186 | 4523207 | 149 | -15.51 |
| CAediting_1277937 | chr19_4523192_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-512-3p | 4523187 | 4523193 | 7mer-m8 | 4523186 | 4523207 | 149 | -15.51 |
| CAediting_1277933 | chr19_4523059_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-552-3p | 4523053 | 4523060 | 8mer-1a | 4523053 | 4523075 | 145 | -15.71 |
| CAediting_1277918 | chr19_4522827_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-552-3p | 4522822 | 4522828 | 7mer-m8 | 4522821 | 4522841 | 142 | -15.68 |
| CAediting_1277921 | chr19_4522970_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-5693 | 4522967 | 4522973 | 7mer-m8 | 4522966 | 4522986 | 143 | -19.24 |
| CAediting_1277912 | chr19_4522748_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-5694 | 4522745 | 4522751 | 7mer-m8 | 4522744 | 4522766 | 155 | -20.49 |
| CAediting_1277931 | chr19_4523047_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-619-5p | 4523046 | 4523051 | 6mer | 4523045 | 4523066 | 154 | -30.8 |
| CAediting_1277926 | chr19_4523012_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-629-5p | 4523008 | 4523014 | 7mer-m8 | 4523007 | 4523027 | 143 | -11.23 |
| CAediting_1277927 | chr19_4523013_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-629-5p | 4523008 | 4523014 | 7mer-m8 | 4523007 | 4523027 | 143 | -11.23 |
| CAediting_1277938 | chr19_4523198_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6504-3p | 4523196 | 4523202 | 7mer-m8 | 4523195 | 4523216 | 152 | -15.11 |
| CAediting_1277937 | chr19_4523192_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6506-5p | 4523191 | 4523197 | 7mer-m8 | 4523190 | 4523212 | 144 | -13.78 |
| CAediting_1277940 | chr19_4523214_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6529-3p | 4523213 | 4523219 | 7mer-m8 | 4523212 | 4523231 | 148 | -18.83 |
| CAediting_1277941 | chr19_4523216_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6529-3p | 4523213 | 4523219 | 7mer-m8 | 4523212 | 4523231 | 148 | -18.83 |
| CAediting_1277922 | chr19_4522982_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6728-3p | 4522978 | 4522985 | 8mer-1a | 4522978 | 4523002 | 153 | -24.97 |
| CAediting_1277936 | chr19_4523171_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6747-3p | 4523169 | 4523175 | 7mer-m8 | 4523168 | 4523188 | 144 | -20.29 |
| CAediting_1277913 | chr19_4522772_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6783-3p | 4522772 | 4522778 | 7mer-m8 | 4522771 | 4522797 | 152 | -27.23 |
| CAediting_1277914 | chr19_4522775_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6783-3p | 4522772 | 4522778 | 7mer-m8 | 4522771 | 4522797 | 152 | -27.23 |
| CAediting_1277939 | chr19_4523206_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6807-5p | 4523206 | 4523212 | 7mer-m8 | 4523205 | 4523226 | 147 | -19.63 |
| CAediting_1277922 | chr19_4522982_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6828-3p | 4522980 | 4522986 | 7mer-m8 | 4522979 | 4523001 | 148 | -18.85 |
| CAediting_1277923 | chr19_4522985_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6828-3p | 4522980 | 4522986 | 7mer-m8 | 4522979 | 4523001 | 148 | -18.85 |
| CAediting_1277916 | chr19_4522799_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6878-3p | 4522798 | 4522805 | 8mer-1a | 4522798 | 4522818 | 142 | -13.53 |
| CAediting_1277940 | chr19_4523214_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6889-3p | 4523213 | 4523219 | 7mer-m8 | 4523212 | 4523233 | 150 | -20.23 |
| CAediting_1277941 | chr19_4523216_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6889-3p | 4523213 | 4523219 | 7mer-m8 | 4523212 | 4523233 | 150 | -20.23 |
| CAediting_1277938 | chr19_4523198_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-7151-3p | 4523197 | 4523204 | 8mer-1a | 4523197 | 4523221 | 145 | -19.65 |
| CAediting_1277933 | chr19_4523059_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-764 | 4523055 | 4523061 | 7mer-m8 | 4523054 | 4523075 | 153 | -25.13 |
| CAediting_1277922 | chr19_4522982_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-767-3p | 4522980 | 4522987 | 8mer-1a | 4522980 | 4523000 | 142 | -18.51 |
| CAediting_1277923 | chr19_4522985_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-767-3p | 4522980 | 4522987 | 8mer-1a | 4522980 | 4523000 | 142 | -18.51 |
| CAediting_1277932 | chr19_4523053_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-8052 | 4523047 | 4523053 | 7mer-1a | 4523047 | 4523067 | 145 | -20.71 |
| CAediting_1277914 | chr19_4522775_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-939-3p | 4522772 | 4522779 | 8mer-1a | 4522772 | 4522794 | 146 | -23.71 |
| CAediting_1278145 | chr19_4533027_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-1343-3p | 4533024 | 4533030 | 7mer-m8 | 4533023 | 4533046 | 143 | -22.21 |
| CAediting_1278145 | chr19_4533027_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-6742-3p | 4533024 | 4533031 | 8mer-1a | 4533024 | 4533043 | 145 | -14.93 |
| CAediting_1278145 | chr19_4533027_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-6783-3p | 4533024 | 4533030 | 7mer-m8 | 4533023 | 4533043 | 146 | -16.81 |
| CAediting_1278142 | chr19_4532581_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-6790-3p | 4532577 | 4532582 | 6mer | 4532576 | 4532598 | 141 | -31.21 |
| CAediting_1278146 | chr19_4533314_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-6843-3p | 4533309 | 4533315 | 7mer-m8 | 4533308 | 4533327 | 152 | -19.47 |
| CAediting_1278146 | chr19_4533314_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-6848-3p | 4533309 | 4533315 | 7mer-m8 | 4533308 | 4533325 | 142 | -14.3 |
| CAediting_1278146 | chr19_4533314_- | ENSG00000214456.7 | ENST00000586133 | hsa-miR-6843-3p | 4533309 | 4533315 | 7mer-m8 | 4533308 | 4533327 | 152 | -19.47 |
| CAediting_1278146 | chr19_4533314_- | ENSG00000214456.7 | ENST00000586133 | hsa-miR-6848-3p | 4533309 | 4533315 | 7mer-m8 | 4533308 | 4533325 | 142 | -14.3 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| CAediting_980496 | chr14_31014685_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-624-3p | 4523112 | 4523118 | 7mer-m8 | 4523111 | 4523131 | 152 | -12.73 |
| CAediting_748296 | chr10_51299626_+ | ENSG00000214456.7 | ENST00000592610 | hsa-miR-605-3p | 4532719 | 4532725 | 7mer-m8 | 4532718 | 4532735 | 147 | -18.14 |
| CAediting_980496 | chr14_31014685_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-624-3p | 4532536 | 4532542 | 7mer-m8 | 4532535 | 4532555 | 156 | -13.04 |
| CAediting_980496 | chr14_31014685_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-624-3p | 4533283 | 4533289 | 7mer-m8 | 4533282 | 4533304 | 149 | -13.11 |
| CAediting_980496 | chr14_31014685_- | ENSG00000214456.7 | ENST00000586133 | hsa-miR-624-3p | 4533283 | 4533289 | 7mer-m8 | 4533282 | 4533304 | 149 | -13.11 |
| CAediting_1399425 | chr20_1392958_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-6869-5p | 4533779 | 4533786 | 8mer-1a | 4533779 | 4533799 | 160 | -27.99 |
| CAediting_524911 | chr7_5495852_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-589-3p | 4533481 | 4533488 | 8mer-1a | 4533481 | 4533503 | 148 | -19.7 |
| CAediting_1399425 | chr20_1392958_- | ENSG00000214456.7 | ENST00000586133 | hsa-miR-6869-5p | 4533779 | 4533786 | 8mer-1a | 4533779 | 4533799 | 160 | -27.99 |
| CAediting_524911 | chr7_5495852_- | ENSG00000214456.7 | ENST00000586133 | hsa-miR-589-3p | 4533481 | 4533488 | 8mer-1a | 4533481 | 4533503 | 148 | -19.7 |
| CAediting_468389 | chr6_31355314_- | ENSG00000214456.7 | ENST00000381848 | hsa-miR-6891-5p | 4522623 | 4522629 | 7mer-m8 | 4522622 | 4522640 | 145 | -17.65 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| CAediting_748296 | chr10_51299626_+ | ENSG00000214456.7 | ENST00000381848 | hsa-miR-605-3p | 4522875 | 4522881 | 7mer-m8 | 4522874 | 4522897 | 146 | -12.19 |
| CAediting_468389 | chr6_31355314_- | ENSG00000214456.7 | ENST00000592610 | hsa-miR-6891-5p | 4533763 | 4533768 | 6mer | 4533762 | 4533779 | 151 | -30.36 |
| CAediting_468389 | chr6_31355314_- | ENSG00000214456.7 | ENST00000586133 | hsa-miR-6891-5p | 4533763 | 4533768 | 6mer | 4533762 | 4533779 | 151 | -30.36 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for PLIN5 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
| CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for PLIN5 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| LIHC | CAediting_1277927 | chr19_4523013_- | 1.50139548820871e-07 | 0.450677334489739 | . | . | . | . |
| LIHC | CAediting_1277947 | chr19_4526257_- | 0.017807486714962 | 0.282512127391936 | . | . | . | . |
| BLCA | CAediting_1277960 | chr19_4526350_- | 0.000189901224278703 | 0.391948399715369 | . | . | . | . |
| BRCA | CAediting_1277960 | chr19_4526350_- | 1.36157406741694e-05 | 0.278997313822597 | . | . | . | . |
| LIHC | CAediting_1277973 | chr19_4526472_- | 0.0013225109754098 | 0.230122115731898 | . | . | . | . |
| PRAD | CAediting_1277973 | chr19_4526472_- | . | . | . | . | 0.00182866094297787 | 0.3822174383612 |
| BRCA | CAediting_1277975 | chr19_4526480_- | 0.0137501314526073 | 0.141878040446358 | . | . | . | . |
| LIHC | CAediting_1277986 | chr19_4526581_- | 0.00304748555892077 | 0.222750109869759 | . | . | . | . |
| LIHC | CAediting_1277990 | chr19_4526597_- | 0.00134378670548349 | 0.246871532462946 | . | . | . | . |
| BLCA | CAediting_1277996 | chr19_4526651_- | 0.00432644321715523 | 0.334741137205927 | 0.00951472842870188 | 0.305750278963999 | . | . |
| BRCA | CAediting_1277996 | chr19_4526651_- | 1.48136944271778e-05 | 0.270186338306578 | . | . | . | . |
| LIHC | CAediting_1277996 | chr19_4526651_- | 1.01877474282912e-07 | 0.351786414197628 | . | . | . | . |
| PRAD | CAediting_1277996 | chr19_4526651_- | 0.0244297581279069 | 0.228415195328754 | . | . | . | . |
| BRCA | CAediting_1277998 | chr19_4526678_- | 0.00156131979999932 | 0.191598794565619 | . | . | . | . |
| LIHC | CAediting_1277998 | chr19_4526678_- | 0.00632717909330578 | 0.188297481462416 | . | . | . | . |
| PRAD | CAediting_1277998 | chr19_4526678_- | . | . | . | . | 0.0464984339072004 | 0.19382778745011 |
| LIHC | CAediting_1277999 | chr19_4526680_- | 0.00953964734523017 | 0.223181076458499 | . | . | . | . |
| BLCA | CAediting_1278007 | chr19_4526746_- | 0.00398178966901738 | 0.333098946054497 | . | . | . | . |
| BRCA | CAediting_1278007 | chr19_4526746_- | 2.34415218799205e-07 | 0.326234064404443 | . | . | . | . |
| LIHC | CAediting_1278007 | chr19_4526746_- | 0.00514665481603129 | 0.194247424201263 | . | . | . | . |
| BLCA | CAediting_1278015 | chr19_4526827_- | 0.00438379273282097 | 0.325449131575186 | . | . | . | . |
| BRCA | CAediting_1278015 | chr19_4526827_- | 0.034824405312119 | 0.136017217901153 | . | . | . | . |
| BRCA | CAediting_1278016 | chr19_4526832_- | . | . | 0.00482118099184723 | 0.25569931289063 | . | . |
| PRAD | CAediting_1278016 | chr19_4526832_- | . | . | 0.000329856291690943 | 0.444701182481603 | . | . |
| LIHC | CAediting_1278021 | chr19_4526980_- | 6.92035910706938e-05 | 0.466501060664196 | . | . | . | . |
| BRCA | CAediting_1278022 | chr19_4526992_- | 0.0195314731097914 | 0.267403057518528 | . | . | . | . |
| BRCA | CAediting_1278023 | chr19_4526993_- | 0.0046658303312364 | 0.290938946226688 | . | . | . | . |
| BRCA | CAediting_1278024 | chr19_4526994_- | 0.0155607172051754 | 0.240160703498989 | . | . | . | . |
| LIHC | CAediting_1278047 | chr19_4527247_- | 0.0138388887092969 | 0.239568636828069 | . | . | . | . |
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Relation with cancer stages for PLIN5 |
| Correlation between Cancer stages and RNA editing frequency |
| Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
| BRCA | pathologic_stage | CAediting_1277960 | chr19_4526350_- | 0.0407728964105688 | 0.13414200760572 |
| BRCA | pathologic_stage | CAediting_1277973 | chr19_4526472_- | 0.0165364264504341 | 0.209898004556647 |
| BRCA | pathologic_stage | CAediting_1277975 | chr19_4526480_- | 0.0193443904298709 | 0.136346401197114 |
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Relation with survival for PLIN5 |
| Correlation between RNA editing and survival |
| Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
| BRCA | CAediting_1277975 | chr19_4526480_- | 0.00156308320141274 | 0.0181681 | 12182.7 |
| LIHC | CAediting_1277990 | chr19_4526597_- | 0.0221149145043895 | 0.0291521 | 30.9191 |
| LIHC | CAediting_1278047 | chr19_4527247_- | 0.0141385704274539 | 0.0175288 | 56.2541 |
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RelatedDrugs for PLIN5 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PLIN5 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
