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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: FOXO4 (CAeditome ID:4303) |
Gene summary for FOXO4 |
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Gene information | Gene symbol | FOXO4 | Gene ID | 4303 |
Gene name | forkhead box O4 | |
Synonyms | AFX|AFX1|MLLT7 | |
Cytomap | Xq13.1 | |
Type of gene | protein-coding | |
Description | forkhead box protein O4fork head domain transcription factor AFX1myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 7 | |
Modification date | 20210518 | |
UniProtAcc | P98177 | |
Context | - 34055579(Clinicopathological Significance of FOXO4 Expression and Correlation with Prx1 in Head and Neck Squamous Cell Carcinoma) |
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Gene | GO ID | GO term | PubMed ID |
FOXO4 | GO:0001228 | Forkhead box protein O4 | 11689711 |
FOXO4 | GO:0003677 | Forkhead box protein O4 | 10783894 |
FOXO4 | GO:0003700 | Forkhead box protein O4 | 10783894 |
FOXO4 | GO:0008013 | Forkhead box protein O4 | 15905404 |
FOXO4 | GO:0043565 | Forkhead box protein O4 | 23332764 |
FOXO4 | GO:1990837 | Forkhead box protein O4 | 28473536 |
FOXO4 | GO:0006355 | Forkhead box protein O4 | 15126506 |
FOXO4 | GO:0008285 | Forkhead box protein O4 | 10783894 |
FOXO4 | GO:0008286 | Forkhead box protein O4 | 10217147 |
FOXO4 | GO:0016525 | Forkhead box protein O4 | 12761217 |
FOXO4 | GO:0045944 | Forkhead box protein O4 | 11689711 |
FOXO4 | GO:0045944 | Forkhead box protein O4 | 15905404 |
FOXO4 | GO:0051151 | Forkhead box protein O4 | 16054032 |
FOXO4 | GO:0051726 | Forkhead box protein O4 | 10783894 |
FOXO4 | GO:0051726 | Forkhead box protein O4 | 15905404 |
FOXO4 | GO:0070317 | Forkhead box protein O4 | 10783894 |
FOXO4 | GO:0005634 | Forkhead box protein O4 | 16272144 |
FOXO4 | GO:0005634 | Forkhead box protein O4 | 16964248 |
FOXO4 | GO:0005737 | Forkhead box protein O4 | 16964248 |
FOXO4 | GO:0005829 | Forkhead box protein O4 | 0000052 |
FOXO4 | GO:0005829 | Forkhead box protein O4 | 16272144 |
FOXO4 | GO:0016607 | Forkhead box protein O4 | 0000052 |
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RNA A-to-I events for FOXO4 |
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CAediting_1510786(71096426, +), |
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RNA editing positional annotations for FOXO4 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_1510786 | chrX_71096426_+ | ncRNA_exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
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RNA A-to-I editing events in the alternative splicing sites for FOXO4 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FOXO4 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for FOXO4 |
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The effects of the RNA editing to the miRNA binding sites for FOXO4 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for FOXO4 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for FOXO4 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for FOXO4 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BRCA | pathologic_stage | CAediting_1510786 | chrX_71096426_+ | 0.000845664253670111 | -0.382262925763838 |
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Relation with survival for FOXO4 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for FOXO4 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for FOXO4 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
FOXO4 | C0025322 | Premature Menopause | 1 | GENOMICS_ENGLAND |