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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CIITA (CAeditome ID:4261)

Gene summary for CIITA

check button Gene summary
Gene informationGene symbol

CIITA

Gene ID

4261

Gene nameclass II major histocompatibility complex transactivator
SynonymsC2TA|CIITAIV|MHC2TA|NLRA
Cytomap

16p13.13

Type of geneprotein-coding
DescriptionMHC class II transactivatorMHC class II transactivator type IMHC class II transactivator type IIINLR family, acid domain containingnucleotide-binding oligomerization domain, leucine rich repeat and acid domain containing
Modification date20210518
UniProtAcc

P33076

Context- 31870593(Link between CIITA rs3087456 polymorphism and the risk of laryngeal squamous cell carcinoma in a Chinese population)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CIITA

GO:0046677

MHC class II transactivator

107465

CIITA

GO:0000976

MHC class II transactivator

19041327

CIITA

GO:0044877

MHC class II transactivator

17493635

CIITA

GO:0034341

MHC class II transactivator

19041327

CIITA

GO:0034341

MHC class II transactivator

32855215

CIITA

GO:0045345

MHC class II transactivator

20639463

CIITA

GO:0045892

MHC class II transactivator

19041327

CIITA

GO:0045893

MHC class II transactivator

19041327

CIITA

GO:0045944

MHC class II transactivator

20639463

CIITA

GO:0045944

MHC class II transactivator

32855215

CIITA

GO:0046597

MHC class II transactivator

32855215

CIITA

GO:0005654

MHC class II transactivator

0000052

CIITA

GO:0005829

MHC class II transactivator

0000052

CIITA

GO:0016605

MHC class II transactivator

23007646


Top

RNA A-to-I events for CIITA

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000179583.16
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1086463(10890353, +), CAediting_1086464(10890387, +), CAediting_1086465(10890426, +), CAediting_1086466(10890434, +), CAediting_1086467(10890507, +), CAediting_1086468(10892090, +), CAediting_1086469(10892273, +), CAediting_1086470(10892274, +), CAediting_1086471(10892281, +), CAediting_1086472(10892695, +), CAediting_1086473(10892731, +), CAediting_1086474(10892813, +), CAediting_1086475(10892826, +), CAediting_1086476(10892839, +), CAediting_1086477(10892919, +), CAediting_1086478(10893589, +), CAediting_1086479(10893611, +), CAediting_1086480(10893662, +), CAediting_1086481(10893689, +), CAediting_1086482(10893702, +), CAediting_1086483(10893705, +), CAediting_1086484(10893715, +), CAediting_1086485(10893743, +), CAediting_1086486(10893758, +), CAediting_1086487(10894086, +), CAediting_1086488(10894087, +), CAediting_1086489(10894091, +), CAediting_1086490(10894104, +), CAediting_1086491(10894112, +), CAediting_1086492(10894114, +), CAediting_1086493(10900669, +), CAediting_1086494(10905668, +), CAediting_1086495(10911760, +), CAediting_1086496(10913334, +), CAediting_1086497(10913454, +), CAediting_1086498(10913490, +), CAediting_1086499(10913496, +), CAediting_1086500(10913499, +), CAediting_1086501(10913513, +), CAediting_1086502(10913545, +), CAediting_1086503(10913575, +), CAediting_1086504(10913576, +), CAediting_1086505(10913588, +), CAediting_1086506(10913684, +), CAediting_1086507(10913685, +), CAediting_1086508(10913690, +), CAediting_1086509(10913752, +), CAediting_1086510(10913756, +), CAediting_1086511(10913762, +), CAediting_1086512(10913767, +), CAediting_1086513(10913794, +), CAediting_1086514(10913820, +), CAediting_1086515(10913830, +), CAediting_1086516(10913847, +), CAediting_1086517(10913856, +), CAediting_1086518(10913862, +), CAediting_1086519(10913886, +), CAediting_1086520(10913896, +), CAediting_1086521(10913906, +), CAediting_1086522(10913923, +), CAediting_1086523(10919586, +), CAediting_1086524(10919609, +), CAediting_1086525(10919635, +), CAediting_1086526(10919638, +), CAediting_1086527(10919649, +), CAediting_1086528(10919651, +), CAediting_1086529(10919660, +), CAediting_1086530(10919669, +), CAediting_1086531(10919670, +), CAediting_1086532(10919683, +), CAediting_1086533(10919700, +), CAediting_1086534(10919702, +), CAediting_1086535(10919707, +), CAediting_1086536(10919711, +), CAediting_1086537(10919715, +), CAediting_1086538(10919733, +), CAediting_1086539(10919737, +), CAediting_1086540(10919739, +), CAediting_1086541(10919741, +), CAediting_1086542(10919742, +), CAediting_1086543(10919743, +), CAediting_1086544(10919754, +), CAediting_1086545(10919755, +), CAediting_1086546(10919761, +), CAediting_1086547(10919762, +), CAediting_1086548(10919777, +), CAediting_1086549(10919778, +), CAediting_1086550(10919805, +), CAediting_1086551(10919852, +), CAediting_1086552(10919859, +), CAediting_1086553(10919867, +), CAediting_1086554(10919871, +), CAediting_1086555(10919872, +), CAediting_1086556(10919873, +), CAediting_1086557(10919875, +), CAediting_1086558(10919876, +), CAediting_1086559(10919877, +), CAediting_1086560(10919878, +), CAediting_1086561(10919880, +), CAediting_1086562(10919885, +), CAediting_1086563(10919886, +), CAediting_1086564(10919887, +), CAediting_1086565(10919898, +), CAediting_1086566(10919906, +), CAediting_1086567(10919907, +), CAediting_1086568(10919915, +), CAediting_1086569(10919916, +), CAediting_1086570(10919919, +), CAediting_1086571(10923952, +), CAediting_1086572(10924249, +), CAediting_1086573(10924261, +), CAediting_1086574(10924267, +), CAediting_1086575(10924277, +), CAediting_1086576(10924289, +), CAediting_1086577(10924298, +), CAediting_1086578(10924308, +), CAediting_1086579(10924334, +), CAediting_1086580(10924338, +), CAediting_1086581(10924351, +), CAediting_1086582(10924360, +), CAediting_1086583(10924363, +), CAediting_1086584(10924370, +), CAediting_1086585(10924375, +), CAediting_1086586(10924383, +), CAediting_1086587(10924399, +), CAediting_1086588(10924413, +), CAediting_1086589(10924416, +), CAediting_1086590(10924433, +), CAediting_1086591(10924453, +), CAediting_1086592(10924455, +), CAediting_1086593(10924467, +), CAediting_1086594(10924472, +), CAediting_1086595(10924476, +), CAediting_1086596(10924485, +), CAediting_1086597(10924493, +), CAediting_1086598(10924494, +), CAediting_1086599(10924495, +), CAediting_1086600(10924507, +), CAediting_1086601(10924510, +), CAediting_1086602(10925325, +), CAediting_1086603(10925327, +), CAediting_1086604(10925351, +), CAediting_1086605(10925359, +), CAediting_1086606(10925363, +), CAediting_1086607(10925372, +), CAediting_1086608(10925387, +), CAediting_1086609(10925406, +), CAediting_1086610(10925407, +), CAediting_1086611(10925419, +), CAediting_1086612(10925424, +), CAediting_1086613(10925434, +), CAediting_1086614(10925443, +), CAediting_1086615(10925485, +), CAediting_1086616(10925493, +), CAediting_1086617(10925495, +), CAediting_1086618(10925510, +), CAediting_1086619(10925523, +), CAediting_1086620(10925544, +), CAediting_1086621(10925545, +), CAediting_1086622(10925571, +), CAediting_1086623(10925572, +), CAediting_1086624(10925600, +), CAediting_1086625(10926548, +), CAediting_1086626(10926558, +), CAediting_1086627(10926560, +), CAediting_1086628(10926562, +), CAediting_1086629(10926571, +), CAediting_1086630(10926577, +), CAediting_1086631(10926591, +), CAediting_1086632(10926596, +), CAediting_1086633(10926602, +), CAediting_1086634(10926605, +), CAediting_1086635(10926615, +), CAediting_1086636(10926621, +), CAediting_1086637(10926640, +), CAediting_1086638(10926641, +), CAediting_1086639(10926644, +), CAediting_1086640(10926653, +), CAediting_1086641(10926658, +), CAediting_1086642(10926666, +), CAediting_1086643(10926670, +), CAediting_1086644(10926680, +), CAediting_1086645(10926706, +), CAediting_1086646(10926721, +), CAediting_1086647(10926724, +), CAediting_1086648(10926726, +), CAediting_1086649(10926732, +), CAediting_1086650(10926738, +), CAediting_1086651(10926741, +), CAediting_1086652(10926750, +), CAediting_1086653(10926781, +), CAediting_1086654(10926782, +), CAediting_1086655(10926794, +), CAediting_1086656(10926796, +), CAediting_1086657(10928331, +), CAediting_1086658(10928339, +), CAediting_1086659(10928343, +), CAediting_1086660(10928352, +), CAediting_1086661(10928357, +), CAediting_1086662(10928358, +), CAediting_1086663(10928367, +), CAediting_1086664(10928368, +), CAediting_1086665(10928388, +), CAediting_1086666(10928389, +), CAediting_1086667(10928392, +), CAediting_1086668(10928393, +), CAediting_1086669(10928415, +), CAediting_1086670(10928418, +), CAediting_1086671(10928431, +), CAediting_1086672(10928454, +), CAediting_1086673(10928465, +), CAediting_1086674(10928471, +), CAediting_1086675(10928474, +), CAediting_1086676(10928488, +), CAediting_1086677(10928500, +), CAediting_1086678(10928513, +), CAediting_1086679(10928519, +), CAediting_1086680(10928520, +), CAediting_1086681(10928525, +), CAediting_1086682(10928526, +), CAediting_1086683(10928530, +), CAediting_1086684(10928553, +), CAediting_1086685(10928571, +),

Top

RNA editing positional annotations for CIITA using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1086463chr16_10890353_+ncRNA_intronic
CAediting_1086464chr16_10890387_+ncRNA_intronic
CAediting_1086465chr16_10890426_+ncRNA_intronic
CAediting_1086466chr16_10890434_+ncRNA_intronic
CAediting_1086467chr16_10890507_+ncRNA_intronic
CAediting_1086468chr16_10892090_+ncRNA_intronic
CAediting_1086469chr16_10892273_+ncRNA_intronic
CAediting_1086470chr16_10892274_+ncRNA_intronic
CAediting_1086471chr16_10892281_+ncRNA_intronic
CAediting_1086472chr16_10892695_+ncRNA_intronic
CAediting_1086473chr16_10892731_+ncRNA_intronic
CAediting_1086474chr16_10892813_+ncRNA_intronic
CAediting_1086475chr16_10892826_+ncRNA_intronic
CAediting_1086476chr16_10892839_+ncRNA_intronic
CAediting_1086477chr16_10892919_+ncRNA_intronic
CAediting_1086478chr16_10893589_+ncRNA_intronic
CAediting_1086479chr16_10893611_+ncRNA_intronic
CAediting_1086480chr16_10893662_+ncRNA_intronic
CAediting_1086481chr16_10893689_+ncRNA_intronic
CAediting_1086482chr16_10893702_+ncRNA_intronic
CAediting_1086483chr16_10893705_+ncRNA_intronic
CAediting_1086484chr16_10893715_+ncRNA_intronic
CAediting_1086485chr16_10893743_+ncRNA_intronic
CAediting_1086486chr16_10893758_+ncRNA_intronic
CAediting_1086487chr16_10894086_+ncRNA_intronic
CAediting_1086488chr16_10894087_+ncRNA_intronic
CAediting_1086489chr16_10894091_+ncRNA_intronic
CAediting_1086490chr16_10894104_+ncRNA_intronic
CAediting_1086491chr16_10894112_+ncRNA_intronic
CAediting_1086492chr16_10894114_+ncRNA_intronic
CAediting_1086493chr16_10900669_+ncRNA_intronic
CAediting_1086494chr16_10905668_+ncRNA_intronic
CAediting_1086495chr16_10911760_+ncRNA_intronic
CAediting_1086496chr16_10913334_+ncRNA_intronic
CAediting_1086497chr16_10913454_+ncRNA_intronic
CAediting_1086498chr16_10913490_+ncRNA_intronic
CAediting_1086499chr16_10913496_+ncRNA_intronic
CAediting_1086500chr16_10913499_+ncRNA_intronic
CAediting_1086501chr16_10913513_+ncRNA_intronic
CAediting_1086502chr16_10913545_+ncRNA_intronic
CAediting_1086503chr16_10913575_+ncRNA_intronic
CAediting_1086504chr16_10913576_+ncRNA_intronic
CAediting_1086505chr16_10913588_+ncRNA_intronic
CAediting_1086506chr16_10913684_+ncRNA_intronic
CAediting_1086507chr16_10913685_+ncRNA_intronic
CAediting_1086508chr16_10913690_+ncRNA_intronic
CAediting_1086509chr16_10913752_+ncRNA_intronic
CAediting_1086510chr16_10913756_+ncRNA_intronic
CAediting_1086511chr16_10913762_+ncRNA_intronic
CAediting_1086512chr16_10913767_+ncRNA_intronic
CAediting_1086513chr16_10913794_+ncRNA_intronic
CAediting_1086514chr16_10913820_+ncRNA_intronic
CAediting_1086515chr16_10913830_+ncRNA_intronic
CAediting_1086516chr16_10913847_+ncRNA_intronic
CAediting_1086517chr16_10913856_+ncRNA_intronic
CAediting_1086518chr16_10913862_+ncRNA_intronic
CAediting_1086519chr16_10913886_+ncRNA_intronic
CAediting_1086520chr16_10913896_+ncRNA_intronic
CAediting_1086521chr16_10913906_+ncRNA_intronic
CAediting_1086522chr16_10913923_+ncRNA_intronic
CAediting_1086523chr16_10919586_+ncRNA_intronic
CAediting_1086524chr16_10919609_+ncRNA_intronic
CAediting_1086525chr16_10919635_+ncRNA_intronic
CAediting_1086526chr16_10919638_+ncRNA_intronic
CAediting_1086527chr16_10919649_+ncRNA_intronic
CAediting_1086528chr16_10919651_+ncRNA_intronic
CAediting_1086529chr16_10919660_+ncRNA_intronic
CAediting_1086530chr16_10919669_+ncRNA_intronic
CAediting_1086531chr16_10919670_+ncRNA_intronic
CAediting_1086532chr16_10919683_+ncRNA_intronic
CAediting_1086533chr16_10919700_+ncRNA_intronic
CAediting_1086534chr16_10919702_+ncRNA_intronic
CAediting_1086535chr16_10919707_+ncRNA_intronic
CAediting_1086536chr16_10919711_+ncRNA_intronic
CAediting_1086537chr16_10919715_+ncRNA_intronic
CAediting_1086538chr16_10919733_+ncRNA_intronic
CAediting_1086539chr16_10919737_+ncRNA_intronic
CAediting_1086540chr16_10919739_+ncRNA_intronic
CAediting_1086541chr16_10919741_+ncRNA_intronic
CAediting_1086542chr16_10919742_+ncRNA_intronic
CAediting_1086543chr16_10919743_+ncRNA_intronic
CAediting_1086544chr16_10919754_+ncRNA_intronic
CAediting_1086545chr16_10919755_+ncRNA_intronic
CAediting_1086546chr16_10919761_+ncRNA_intronic
CAediting_1086547chr16_10919762_+ncRNA_intronic
CAediting_1086548chr16_10919777_+ncRNA_intronic
CAediting_1086549chr16_10919778_+ncRNA_intronic
CAediting_1086550chr16_10919805_+ncRNA_intronic
CAediting_1086551chr16_10919852_+ncRNA_intronic
CAediting_1086552chr16_10919859_+ncRNA_intronic
CAediting_1086553chr16_10919867_+ncRNA_intronic
CAediting_1086554chr16_10919871_+ncRNA_intronic
CAediting_1086555chr16_10919872_+ncRNA_intronic
CAediting_1086556chr16_10919873_+ncRNA_intronic
CAediting_1086557chr16_10919875_+ncRNA_intronic
CAediting_1086558chr16_10919876_+ncRNA_intronic
CAediting_1086559chr16_10919877_+ncRNA_intronic
CAediting_1086560chr16_10919878_+ncRNA_intronic
CAediting_1086561chr16_10919880_+ncRNA_intronic
CAediting_1086562chr16_10919885_+ncRNA_intronic
CAediting_1086563chr16_10919886_+ncRNA_intronic
CAediting_1086564chr16_10919887_+ncRNA_intronic
CAediting_1086565chr16_10919898_+ncRNA_intronic
CAediting_1086566chr16_10919906_+ncRNA_intronic
CAediting_1086567chr16_10919907_+ncRNA_intronic
CAediting_1086568chr16_10919915_+ncRNA_intronic
CAediting_1086569chr16_10919916_+ncRNA_intronic
CAediting_1086570chr16_10919919_+ncRNA_intronic
CAediting_1086571chr16_10923952_+ncRNA_exonic
CAediting_1086572chr16_10924249_+ncRNA_exonic
CAediting_1086573chr16_10924261_+ncRNA_exonic
CAediting_1086574chr16_10924267_+ncRNA_exonic
CAediting_1086575chr16_10924277_+ncRNA_exonic
CAediting_1086576chr16_10924289_+ncRNA_exonic
CAediting_1086577chr16_10924298_+ncRNA_exonic
CAediting_1086578chr16_10924308_+ncRNA_exonic
CAediting_1086579chr16_10924334_+ncRNA_exonic
CAediting_1086580chr16_10924338_+ncRNA_exonic
CAediting_1086581chr16_10924351_+ncRNA_exonic
CAediting_1086582chr16_10924360_+ncRNA_exonic
CAediting_1086583chr16_10924363_+ncRNA_exonic
CAediting_1086584chr16_10924370_+ncRNA_exonic
CAediting_1086585chr16_10924375_+ncRNA_exonic
CAediting_1086586chr16_10924383_+ncRNA_exonic
CAediting_1086587chr16_10924399_+ncRNA_exonic
CAediting_1086588chr16_10924413_+ncRNA_exonic
CAediting_1086589chr16_10924416_+ncRNA_exonic
CAediting_1086590chr16_10924433_+ncRNA_exonic
CAediting_1086591chr16_10924453_+ncRNA_exonic
CAediting_1086592chr16_10924455_+ncRNA_exonic
CAediting_1086593chr16_10924467_+ncRNA_exonic
CAediting_1086594chr16_10924472_+ncRNA_exonic
CAediting_1086595chr16_10924476_+ncRNA_exonic
CAediting_1086596chr16_10924485_+ncRNA_exonic
CAediting_1086597chr16_10924493_+ncRNA_exonic
CAediting_1086598chr16_10924494_+ncRNA_exonic
CAediting_1086599chr16_10924495_+ncRNA_exonic
CAediting_1086600chr16_10924507_+ncRNA_exonic
CAediting_1086601chr16_10924510_+ncRNA_exonic
CAediting_1086602chr16_10925325_+UTR3
CAediting_1086603chr16_10925327_+UTR3
CAediting_1086604chr16_10925351_+UTR3
CAediting_1086605chr16_10925359_+UTR3
CAediting_1086606chr16_10925363_+UTR3
CAediting_1086607chr16_10925372_+UTR3
CAediting_1086608chr16_10925387_+UTR3
CAediting_1086609chr16_10925406_+UTR3
CAediting_1086610chr16_10925407_+UTR3
CAediting_1086611chr16_10925419_+UTR3
CAediting_1086612chr16_10925424_+UTR3
CAediting_1086613chr16_10925434_+UTR3
CAediting_1086614chr16_10925443_+UTR3
CAediting_1086615chr16_10925485_+UTR3
CAediting_1086616chr16_10925493_+UTR3
CAediting_1086617chr16_10925495_+UTR3
CAediting_1086618chr16_10925510_+UTR3
CAediting_1086619chr16_10925523_+UTR3
CAediting_1086620chr16_10925544_+UTR3
CAediting_1086621chr16_10925545_+UTR3
CAediting_1086622chr16_10925571_+UTR3
CAediting_1086623chr16_10925572_+UTR3
CAediting_1086624chr16_10925600_+UTR3
CAediting_1086625chr16_10926548_+UTR3
CAediting_1086626chr16_10926558_+UTR3
CAediting_1086627chr16_10926560_+UTR3
CAediting_1086628chr16_10926562_+UTR3
CAediting_1086629chr16_10926571_+UTR3
CAediting_1086630chr16_10926577_+UTR3
CAediting_1086631chr16_10926591_+UTR3
CAediting_1086632chr16_10926596_+UTR3
CAediting_1086633chr16_10926602_+UTR3
CAediting_1086634chr16_10926605_+UTR3
CAediting_1086635chr16_10926615_+UTR3
CAediting_1086636chr16_10926621_+UTR3
CAediting_1086637chr16_10926640_+UTR3
CAediting_1086638chr16_10926641_+UTR3
CAediting_1086639chr16_10926644_+UTR3
CAediting_1086640chr16_10926653_+UTR3
CAediting_1086641chr16_10926658_+UTR3
CAediting_1086642chr16_10926666_+UTR3
CAediting_1086643chr16_10926670_+UTR3
CAediting_1086644chr16_10926680_+UTR3
CAediting_1086645chr16_10926706_+UTR3
CAediting_1086646chr16_10926721_+UTR3
CAediting_1086647chr16_10926724_+UTR3
CAediting_1086648chr16_10926726_+UTR3
CAediting_1086649chr16_10926732_+UTR3
CAediting_1086650chr16_10926738_+UTR3
CAediting_1086651chr16_10926741_+UTR3
CAediting_1086652chr16_10926750_+UTR3
CAediting_1086653chr16_10926781_+UTR3
CAediting_1086654chr16_10926782_+UTR3
CAediting_1086655chr16_10926794_+UTR3
CAediting_1086656chr16_10926796_+UTR3
CAediting_1086657chr16_10928331_+ncRNA_exonic
CAediting_1086658chr16_10928339_+ncRNA_intronic
CAediting_1086659chr16_10928343_+ncRNA_intronic
CAediting_1086660chr16_10928352_+ncRNA_intronic
CAediting_1086661chr16_10928357_+ncRNA_intronic
CAediting_1086662chr16_10928358_+ncRNA_intronic
CAediting_1086663chr16_10928367_+ncRNA_intronic
CAediting_1086664chr16_10928368_+ncRNA_intronic
CAediting_1086665chr16_10928388_+ncRNA_intronic
CAediting_1086666chr16_10928389_+ncRNA_intronic
CAediting_1086667chr16_10928392_+ncRNA_intronic
CAediting_1086668chr16_10928393_+ncRNA_intronic
CAediting_1086669chr16_10928415_+ncRNA_intronic
CAediting_1086670chr16_10928418_+ncRNA_intronic
CAediting_1086671chr16_10928431_+ncRNA_intronic
CAediting_1086672chr16_10928454_+ncRNA_intronic
CAediting_1086673chr16_10928465_+ncRNA_intronic
CAediting_1086674chr16_10928471_+ncRNA_intronic
CAediting_1086675chr16_10928474_+ncRNA_intronic
CAediting_1086676chr16_10928488_+ncRNA_intronic
CAediting_1086677chr16_10928500_+ncRNA_intronic
CAediting_1086678chr16_10928513_+ncRNA_intronic
CAediting_1086679chr16_10928519_+ncRNA_intronic
CAediting_1086680chr16_10928520_+ncRNA_intronic
CAediting_1086681chr16_10928525_+ncRNA_intronic
CAediting_1086682chr16_10928526_+ncRNA_intronic
CAediting_1086683chr16_10928530_+ncRNA_intronic
CAediting_1086684chr16_10928553_+ncRNA_intronic
CAediting_1086685chr16_10928571_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1086463chr16_10890353_+SINEAluAluJb
CAediting_1086464chr16_10890387_+SINEAluAluJb
CAediting_1086465chr16_10890426_+SINEAluAluJb
CAediting_1086466chr16_10890434_+SINEAluAluJb
CAediting_1086467chr16_10890507_+SINEAluAluJb
CAediting_1086468chr16_10892090_+SINEAluAluSx1
CAediting_1086469chr16_10892273_+SINEAluAluSx1
CAediting_1086470chr16_10892274_+SINEAluAluSx1
CAediting_1086471chr16_10892281_+SINEAluAluSx1
CAediting_1086472chr16_10892695_+SINEAluAluSx1
CAediting_1086473chr16_10892731_+SINEAluAluSx1
CAediting_1086474chr16_10892813_+SINEAluAluSx1
CAediting_1086475chr16_10892826_+SINEAluAluSx1
CAediting_1086476chr16_10892839_+SINEAluAluSx1
CAediting_1086477chr16_10892919_+SINEAluAluSx1
CAediting_1086478chr16_10893589_+SINEAluAluSx1
CAediting_1086479chr16_10893611_+SINEAluAluSx1
CAediting_1086480chr16_10893662_+SINEAluAluSx1
CAediting_1086481chr16_10893689_+SINEAluAluSx1
CAediting_1086482chr16_10893702_+SINEAluAluSx1
CAediting_1086483chr16_10893705_+SINEAluAluSx1
CAediting_1086484chr16_10893715_+SINEAluAluSx1
CAediting_1086485chr16_10893743_+SINEAluAluSx1
CAediting_1086486chr16_10893758_+SINEAluAluSx1
CAediting_1086487chr16_10894086_+SINEAluAluJo
CAediting_1086488chr16_10894087_+SINEAluAluJo
CAediting_1086489chr16_10894091_+SINEAluAluJo
CAediting_1086490chr16_10894104_+SINEAluAluJo
CAediting_1086491chr16_10894112_+SINEAluAluJo
CAediting_1086492chr16_10894114_+SINEAluAluJo
CAediting_1086493chr16_10900669_+SINEAluAluSx1
CAediting_1086494chr16_10905668_+SINEAluAluSx1
CAediting_1086495chr16_10911760_+SINEAluAluJb
CAediting_1086496chr16_10913334_+SINEAluAluSc8
CAediting_1086497chr16_10913454_+SINEAluAluSc8
CAediting_1086498chr16_10913490_+SINEAluAluSc8
CAediting_1086499chr16_10913496_+SINEAluAluSc8
CAediting_1086500chr16_10913499_+SINEAluAluSc8
CAediting_1086501chr16_10913513_+SINEAluAluSc8
CAediting_1086502chr16_10913545_+SINEAluAluSc8
CAediting_1086503chr16_10913575_+SINEAluAluSc8
CAediting_1086504chr16_10913576_+SINEAluAluSc8
CAediting_1086505chr16_10913588_+SINEAluAluSc8
CAediting_1086506chr16_10913684_+SINEAluAluSx3
CAediting_1086507chr16_10913685_+SINEAluAluSx3
CAediting_1086508chr16_10913690_+SINEAluAluSx3
CAediting_1086509chr16_10913752_+SINEAluAluSx3
CAediting_1086510chr16_10913756_+SINEAluAluSx3
CAediting_1086511chr16_10913762_+SINEAluAluSx3
CAediting_1086512chr16_10913767_+SINEAluAluSx3
CAediting_1086513chr16_10913794_+SINEAluAluSx3
CAediting_1086514chr16_10913820_+SINEAluAluSx3
CAediting_1086515chr16_10913830_+SINEAluAluSx3
CAediting_1086516chr16_10913847_+SINEAluAluSx3
CAediting_1086517chr16_10913856_+SINEAluAluSx3
CAediting_1086518chr16_10913862_+SINEAluAluSx3
CAediting_1086519chr16_10913886_+SINEAluAluSx3
CAediting_1086520chr16_10913896_+SINEAluAluSx3
CAediting_1086521chr16_10913906_+SINEAluAluSx3
CAediting_1086522chr16_10913923_+SINEAluAluSx3
CAediting_1086523chr16_10919586_+SINEAluFRAM
CAediting_1086524chr16_10919609_+SINEAluFRAM
CAediting_1086525chr16_10919635_+SINEAluFRAM
CAediting_1086526chr16_10919638_+SINEAluFRAM
CAediting_1086549chr16_10919778_+LINEL2L2a
CAediting_1086550chr16_10919805_+LINEL2L2a
CAediting_1086551chr16_10919852_+LINEL2L2a
CAediting_1086552chr16_10919859_+LINEL2L2a
CAediting_1086553chr16_10919867_+LINEL2L2a
CAediting_1086554chr16_10919871_+LINEL2L2a
CAediting_1086555chr16_10919872_+LINEL2L2a
CAediting_1086556chr16_10919873_+LINEL2L2a
CAediting_1086557chr16_10919875_+LINEL2L2a
CAediting_1086558chr16_10919876_+LINEL2L2a
CAediting_1086559chr16_10919877_+LINEL2L2a
CAediting_1086560chr16_10919878_+LINEL2L2a
CAediting_1086561chr16_10919880_+LINEL2L2a
CAediting_1086562chr16_10919885_+LINEL2L2a
CAediting_1086563chr16_10919886_+LINEL2L2a
CAediting_1086564chr16_10919887_+LINEL2L2a
CAediting_1086565chr16_10919898_+LINEL2L2a
CAediting_1086566chr16_10919906_+LINEL2L2a
CAediting_1086567chr16_10919907_+LINEL2L2a
CAediting_1086568chr16_10919915_+LINEL2L2a
CAediting_1086569chr16_10919916_+LINEL2L2a
CAediting_1086570chr16_10919919_+LINEL2L2a
CAediting_1086572chr16_10924249_+SINEAluAluSx1
CAediting_1086573chr16_10924261_+SINEAluAluSx1
CAediting_1086574chr16_10924267_+SINEAluAluSx1
CAediting_1086575chr16_10924277_+SINEAluAluSx1
CAediting_1086576chr16_10924289_+SINEAluAluSx1
CAediting_1086577chr16_10924298_+SINEAluAluSx1
CAediting_1086578chr16_10924308_+SINEAluAluSx1
CAediting_1086579chr16_10924334_+SINEAluAluSx1
CAediting_1086580chr16_10924338_+SINEAluAluSx1
CAediting_1086581chr16_10924351_+SINEAluAluSx1
CAediting_1086582chr16_10924360_+SINEAluAluSx1
CAediting_1086583chr16_10924363_+SINEAluAluSx1
CAediting_1086584chr16_10924370_+SINEAluAluSx1
CAediting_1086585chr16_10924375_+SINEAluAluSx1
CAediting_1086586chr16_10924383_+SINEAluAluSx1
CAediting_1086587chr16_10924399_+SINEAluAluSx1
CAediting_1086588chr16_10924413_+SINEAluAluSx1
CAediting_1086589chr16_10924416_+SINEAluAluSx1
CAediting_1086590chr16_10924433_+SINEAluAluSx1
CAediting_1086591chr16_10924453_+SINEAluAluSx1
CAediting_1086592chr16_10924455_+SINEAluAluSx1
CAediting_1086593chr16_10924467_+SINEAluAluSx1
CAediting_1086594chr16_10924472_+SINEAluAluSx1
CAediting_1086595chr16_10924476_+SINEAluAluSx1
CAediting_1086596chr16_10924485_+SINEAluAluSx1
CAediting_1086597chr16_10924493_+SINEAluAluSx1
CAediting_1086598chr16_10924494_+SINEAluAluSx1
CAediting_1086599chr16_10924495_+SINEAluAluSx1
CAediting_1086600chr16_10924507_+SINEAluAluSx1
CAediting_1086601chr16_10924510_+SINEAluAluSx1
CAediting_1086602chr16_10925325_+SINEAluAluJr
CAediting_1086603chr16_10925327_+SINEAluAluJr
CAediting_1086604chr16_10925351_+SINEAluAluJr
CAediting_1086605chr16_10925359_+SINEAluAluJr
CAediting_1086606chr16_10925363_+SINEAluAluJr
CAediting_1086607chr16_10925372_+SINEAluAluJr
CAediting_1086608chr16_10925387_+SINEAluAluJr
CAediting_1086609chr16_10925406_+SINEAluAluJr
CAediting_1086610chr16_10925407_+SINEAluAluJr
CAediting_1086611chr16_10925419_+SINEAluAluJr
CAediting_1086612chr16_10925424_+SINEAluAluJr
CAediting_1086613chr16_10925434_+SINEAluAluJr
CAediting_1086614chr16_10925443_+SINEAluAluJr
CAediting_1086615chr16_10925485_+SINEAluAluJr
CAediting_1086616chr16_10925493_+SINEAluAluJr
CAediting_1086617chr16_10925495_+SINEAluAluJr
CAediting_1086618chr16_10925510_+SINEAluAluJr
CAediting_1086619chr16_10925523_+SINEAluAluJr
CAediting_1086620chr16_10925544_+SINEAluAluJr
CAediting_1086621chr16_10925545_+SINEAluAluJr
CAediting_1086622chr16_10925571_+SINEAluAluJr
CAediting_1086623chr16_10925572_+SINEAluAluJr
CAediting_1086624chr16_10925600_+SINEAluAluJr
CAediting_1086625chr16_10926548_+SINEAluAluSq
CAediting_1086626chr16_10926558_+SINEAluAluSq
CAediting_1086627chr16_10926560_+SINEAluAluSq
CAediting_1086628chr16_10926562_+SINEAluAluSq
CAediting_1086629chr16_10926571_+SINEAluAluSq
CAediting_1086630chr16_10926577_+SINEAluAluSq
CAediting_1086631chr16_10926591_+SINEAluAluSq
CAediting_1086632chr16_10926596_+SINEAluAluSq
CAediting_1086633chr16_10926602_+SINEAluAluSq
CAediting_1086634chr16_10926605_+SINEAluAluSq
CAediting_1086635chr16_10926615_+SINEAluAluSq
CAediting_1086636chr16_10926621_+SINEAluAluSq
CAediting_1086637chr16_10926640_+SINEAluAluSq
CAediting_1086638chr16_10926641_+SINEAluAluSq
CAediting_1086639chr16_10926644_+SINEAluAluSq
CAediting_1086640chr16_10926653_+SINEAluAluSq
CAediting_1086641chr16_10926658_+SINEAluAluSq
CAediting_1086642chr16_10926666_+SINEAluAluSq
CAediting_1086643chr16_10926670_+SINEAluAluSq
CAediting_1086644chr16_10926680_+SINEAluAluSq
CAediting_1086645chr16_10926706_+SINEAluAluSq
CAediting_1086646chr16_10926721_+SINEAluAluSq
CAediting_1086647chr16_10926724_+SINEAluAluSq
CAediting_1086648chr16_10926726_+SINEAluAluSq
CAediting_1086649chr16_10926732_+SINEAluAluSq
CAediting_1086650chr16_10926738_+SINEAluAluSq
CAediting_1086651chr16_10926741_+SINEAluAluSq
CAediting_1086652chr16_10926750_+SINEAluAluSq
CAediting_1086653chr16_10926781_+SINEAluAluSq
CAediting_1086654chr16_10926782_+SINEAluAluSq
CAediting_1086655chr16_10926794_+SINEAluAluSq
CAediting_1086656chr16_10926796_+SINEAluAluSq
CAediting_1086657chr16_10928331_+SINEAluAluSz
CAediting_1086658chr16_10928339_+SINEAluAluSz
CAediting_1086659chr16_10928343_+SINEAluAluSz
CAediting_1086660chr16_10928352_+SINEAluAluSz
CAediting_1086661chr16_10928357_+SINEAluAluSz
CAediting_1086662chr16_10928358_+SINEAluAluSz
CAediting_1086663chr16_10928367_+SINEAluAluSz
CAediting_1086664chr16_10928368_+SINEAluAluSz
CAediting_1086665chr16_10928388_+SINEAluAluSz
CAediting_1086666chr16_10928389_+SINEAluAluSz
CAediting_1086667chr16_10928392_+SINEAluAluSz
CAediting_1086668chr16_10928393_+SINEAluAluSz
CAediting_1086669chr16_10928415_+SINEAluAluSz
CAediting_1086670chr16_10928418_+SINEAluAluSz
CAediting_1086671chr16_10928431_+SINEAluAluSz
CAediting_1086672chr16_10928454_+SINEAluAluSz
CAediting_1086673chr16_10928465_+SINEAluAluSz
CAediting_1086674chr16_10928471_+SINEAluAluSz
CAediting_1086675chr16_10928474_+SINEAluAluSz
CAediting_1086676chr16_10928488_+SINEAluAluSz
CAediting_1086677chr16_10928500_+SINEAluAluSz
CAediting_1086678chr16_10928513_+SINEAluAluSz
CAediting_1086679chr16_10928519_+SINEAluAluSz
CAediting_1086680chr16_10928520_+SINEAluAluSz
CAediting_1086681chr16_10928525_+SINEAluAluSz
CAediting_1086682chr16_10928526_+SINEAluAluSz
CAediting_1086683chr16_10928530_+SINEAluAluSz
CAediting_1086684chr16_10928553_+SINEAluAluSz
CAediting_1086685chr16_10928571_+SINEAluAluSz

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RNA A-to-I editing events in the alternative splicing sites for CIITA

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_1086591chr16_10924453_+10924448:109244703SS0+15iGTCTCAAACTCTTGACCTCAGGT-10.4GTCTCGAACTCTTGACCTCAGGT-10.85
IRCAediting_1086592chr16_10924455_+10924448:109244703SS0+13iGTCTCAAACTCTTGACCTCAGGT-10.4GTCTCAAGCTCTTGACCTCAGGT-12.96
IRCAediting_1086593chr16_10924467_+10924448:109244703SS0+1iGTCTCAAACTCTTGACCTCAGGT-10.4GTCTCAAACTCTTGACCTCGGGT-1.65
IRCAediting_1086657chr16_10928331_+10928312:109283343SS0+1iCTCTCTTGCTCTGTTGCCCAGGC-8.19CTCTCTTGCTCTGTTGCCCGGGC0.56
IRCAediting_1086657chr16_10928331_+10928330:109283385SS2+0iCAGGCTGGA-2.16CGGGCTGGA-7.7

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000179583.16.CIITA.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000179583.16.CIITA.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CIITA

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CIITA

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CIITA

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618207hsa-miR-10a-5p10924256109242627mer-m81092424110924263140.00-11.43
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618207hsa-miR-10b-5p10924256109242627mer-m81092423910924263148.00-11.50
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618207hsa-miR-339-5p10924255109242617mer-m81092424010924262140.00-14.02
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618207hsa-miR-442110924254109242607mer-m81092424010924261155.00-16.57
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618207hsa-miR-4725-5p10924257109242637mer-m81092424410924264140.00-15.96
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618207hsa-miR-504-5p10924257109242637mer-m81092424410924264149.00-18.80
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618207hsa-miR-5699-3p10924254109242607mer-m81092424010924261140.00-16.12
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618327hsa-miR-10a-5p10924256109242627mer-m81092424110924263140.00-11.43
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618327hsa-miR-10b-5p10924256109242627mer-m81092423910924263148.00-11.50
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618327hsa-miR-339-5p10924255109242617mer-m81092424010924262140.00-14.02
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618327hsa-miR-442110924254109242607mer-m81092424010924261155.00-16.57
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618327hsa-miR-4725-5p10924257109242637mer-m81092424410924264140.00-15.96
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618327hsa-miR-504-5p10924257109242637mer-m81092424410924264149.00-18.80
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618327hsa-miR-5699-3p10924254109242607mer-m81092424010924261140.00-16.12
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000381835hsa-miR-10a-5p10924256109242627mer-m81092424110924263140.00-11.43
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000381835hsa-miR-10b-5p10924256109242627mer-m81092423910924263148.00-11.50
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000381835hsa-miR-339-5p10924255109242617mer-m81092424010924262140.00-14.02
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000381835hsa-miR-442110924254109242607mer-m81092424010924261155.00-16.57
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000381835hsa-miR-4725-5p10924257109242637mer-m81092424410924264140.00-15.96
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000381835hsa-miR-504-5p10924257109242637mer-m81092424410924264149.00-18.80
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000381835hsa-miR-5699-3p10924254109242607mer-m81092424010924261140.00-16.12
CAediting_1086579chr16_10924334_+ENSG00000179583.16ENST00000618207hsa-miR-607810924330109243378mer-1a1092431910924337147.00-20.88
CAediting_1086579chr16_10924334_+ENSG00000179583.16ENST00000618327hsa-miR-607810924330109243378mer-1a1092431910924337147.00-20.88
CAediting_1086579chr16_10924334_+ENSG00000179583.16ENST00000381835hsa-miR-607810924330109243378mer-1a1092431910924337147.00-20.88
CAediting_1086583chr16_10924363_+ENSG00000179583.16ENST00000618207hsa-miR-4691-3p10924360109243667mer-m81092434110924367148.00-24.72
CAediting_1086583chr16_10924363_+ENSG00000179583.16ENST00000618327hsa-miR-4691-3p10924360109243667mer-m81092434110924367148.00-24.72
CAediting_1086583chr16_10924363_+ENSG00000179583.16ENST00000381835hsa-miR-4691-3p10924360109243667mer-m81092434110924367148.00-24.72
CAediting_1086587chr16_10924399_+ENSG00000179583.16ENST00000618207hsa-miR-3157-5p10924393109243997mer-m81092437810924400155.00-19.50
CAediting_1086587chr16_10924399_+ENSG00000179583.16ENST00000618207hsa-miR-34a-3p10924395109244017mer-m81092438010924402153.00-10.89
CAediting_1086587chr16_10924399_+ENSG00000179583.16ENST00000618327hsa-miR-3157-5p10924393109243997mer-m81092437810924400155.00-19.50
CAediting_1086587chr16_10924399_+ENSG00000179583.16ENST00000618327hsa-miR-34a-3p10924395109244017mer-m81092438010924402153.00-10.89
CAediting_1086587chr16_10924399_+ENSG00000179583.16ENST00000381835hsa-miR-3157-5p10924393109243997mer-m81092437810924400155.00-19.50
CAediting_1086587chr16_10924399_+ENSG00000179583.16ENST00000381835hsa-miR-34a-3p10924395109244017mer-m81092438010924402153.00-10.89
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618207hsa-miR-429810923950109239567mer-m81092393310923957153.00-26.63
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000618327hsa-miR-429810923950109239567mer-m81092393310923957153.00-26.63
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-130210923950109239567mer-m81092393610923957148.00-15.72
CAediting_1086571chr16_10923952_+ENSG00000179583.16ENST00000381835hsa-miR-429810923950109239567mer-m81092393310923957153.00-26.63
CAediting_1086572chr16_10924249_+ENSG00000179583.16ENST00000618207hsa-miR-3613-3p10924242109242487mer-m81092422610924249155.00-8.53
CAediting_1086572chr16_10924249_+ENSG00000179583.16ENST00000618327hsa-miR-3613-3p10924242109242487mer-m81092422610924249155.00-8.53
CAediting_1086572chr16_10924249_+ENSG00000179583.16ENST00000381835hsa-miR-3613-3p10924242109242487mer-m81092422610924249155.00-8.53
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618207hsa-miR-3940-3p10924274109242807mer-m81092426010924281147.00-22.99
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618327hsa-miR-3940-3p10924274109242807mer-m81092426010924281147.00-22.99
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000381835hsa-miR-3940-3p10924274109242807mer-m81092426010924281147.00-22.99
CAediting_1086580chr16_10924338_+ENSG00000179583.16ENST00000618207hsa-miR-451110924337109243426mer1092432110924343141.00-20.79
CAediting_1086580chr16_10924338_+ENSG00000179583.16ENST00000618207hsa-miR-548b-3p10924336109243427mer-m81092432410924343144.00-8.92
CAediting_1086580chr16_10924338_+ENSG00000179583.16ENST00000618327hsa-miR-451110924337109243426mer1092432110924343141.00-20.79
CAediting_1086580chr16_10924338_+ENSG00000179583.16ENST00000618327hsa-miR-548b-3p10924336109243427mer-m81092432410924343144.00-8.92
CAediting_1086580chr16_10924338_+ENSG00000179583.16ENST00000381835hsa-miR-451110924337109243426mer1092432110924343141.00-20.79
CAediting_1086580chr16_10924338_+ENSG00000179583.16ENST00000381835hsa-miR-548b-3p10924336109243427mer-m81092432410924343144.00-8.92
CAediting_1086582chr16_10924360_+ENSG00000179583.16ENST00000618207hsa-miR-1247-3p10924354109243607mer-m81092433910924361152.00-23.57
CAediting_1086582chr16_10924360_+ENSG00000179583.16ENST00000618327hsa-miR-1247-3p10924354109243607mer-m81092433910924361152.00-23.57
CAediting_1086582chr16_10924360_+ENSG00000179583.16ENST00000381835hsa-miR-1247-3p10924354109243607mer-m81092433910924361152.00-23.57
CAediting_1086584chr16_10924370_+ENSG00000179583.16ENST00000618207hsa-miR-432310924365109243728mer-1a1092435510924372143.00-15.35
CAediting_1086584chr16_10924370_+ENSG00000179583.16ENST00000618327hsa-miR-432310924365109243728mer-1a1092435510924372143.00-15.35
CAediting_1086584chr16_10924370_+ENSG00000179583.16ENST00000381835hsa-miR-432310924365109243728mer-1a1092435510924372143.00-15.35
CAediting_1086590chr16_10924433_+ENSG00000179583.16ENST00000618207hsa-miR-4445-3p10924427109244337mer-m81092441410924434150.00-18.17
CAediting_1086590chr16_10924433_+ENSG00000179583.16ENST00000618207hsa-miR-548al10924427109244337mer-m81092441110924434151.00-16.65
CAediting_1086590chr16_10924433_+ENSG00000179583.16ENST00000618327hsa-miR-4445-3p10924427109244337mer-m81092441410924434150.00-18.17
CAediting_1086590chr16_10924433_+ENSG00000179583.16ENST00000618327hsa-miR-548al10924427109244337mer-m81092441110924434151.00-16.65
CAediting_1086590chr16_10924433_+ENSG00000179583.16ENST00000381835hsa-miR-4445-3p10924427109244337mer-m81092441410924434150.00-18.17
CAediting_1086590chr16_10924433_+ENSG00000179583.16ENST00000381835hsa-miR-548al10924427109244337mer-m81092441110924434151.00-16.65
CAediting_1086592chr16_10924455_+ENSG00000179583.16ENST00000618207hsa-miR-453810924451109244566mer1092443510924457147.00-27.94
CAediting_1086592chr16_10924455_+ENSG00000179583.16ENST00000618327hsa-miR-453810924451109244566mer1092443510924457147.00-27.94
CAediting_1086594chr16_10924472_+ENSG00000179583.16ENST00000618207hsa-miR-313810924471109244766mer1092445210924477140.00-26.91
CAediting_1086594chr16_10924472_+ENSG00000179583.16ENST00000618207hsa-miR-4776-5p10924469109244757mer-m81092445310924476159.00-28.28
CAediting_1086594chr16_10924472_+ENSG00000179583.16ENST00000618207hsa-miR-4776-5p10924469109244757mer-m81092445310924476159.00-28.28
CAediting_1086594chr16_10924472_+ENSG00000179583.16ENST00000618207hsa-miR-4800-5p10924470109244767mer-m81092445510924477146.00-21.77
CAediting_1086594chr16_10924472_+ENSG00000179583.16ENST00000618327hsa-miR-313810924471109244766mer1092445210924477140.00-26.91
CAediting_1086594chr16_10924472_+ENSG00000179583.16ENST00000618327hsa-miR-4776-5p10924469109244757mer-m81092445310924476159.00-28.28
CAediting_1086594chr16_10924472_+ENSG00000179583.16ENST00000618327hsa-miR-4776-5p10924469109244757mer-m81092445310924476159.00-28.28
CAediting_1086594chr16_10924472_+ENSG00000179583.16ENST00000618327hsa-miR-4800-5p10924470109244767mer-m81092445510924477146.00-21.77
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618207hsa-miR-1228-5p10924473109244797mer-m81092446110924480145.00-24.49
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618327hsa-miR-1228-5p10924473109244797mer-m81092446110924480145.00-24.49
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618207hsa-miR-32610924489109244957mer-m81092447710924496140.00-13.25
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618207hsa-miR-330-5p10924489109244957mer-m81092447310924496141.00-19.11
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618207hsa-miR-431410924488109244947mer-m81092447710924495141.00-20.85
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618207hsa-miR-514a-5p10924490109244967mer-m81092447410924497150.00-18.62
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618207hsa-miR-514a-5p10924490109244967mer-m81092447410924497150.00-18.62
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618207hsa-miR-514a-5p10924490109244967mer-m81092447410924497150.00-18.62
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618327hsa-miR-32610924489109244957mer-m81092447710924496140.00-13.25
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618327hsa-miR-330-5p10924489109244957mer-m81092447310924496141.00-19.11
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618327hsa-miR-431410924488109244947mer-m81092447710924495141.00-20.85
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618327hsa-miR-514a-5p10924490109244967mer-m81092447410924497150.00-18.62
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618327hsa-miR-514a-5p10924490109244967mer-m81092447410924497150.00-18.62
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618327hsa-miR-514a-5p10924490109244967mer-m81092447410924497150.00-18.62
CAediting_1086599chr16_10924495_+ENSG00000179583.16ENST00000618207hsa-miR-3189-3p10924489109244957mer-m81092447310924496157.00-25.36
CAediting_1086599chr16_10924495_+ENSG00000179583.16ENST00000618207hsa-miR-6813-3p10924490109244967mer-m81092447710924497140.00-10.68
CAediting_1086599chr16_10924495_+ENSG00000179583.16ENST00000618327hsa-miR-3189-3p10924489109244957mer-m81092447310924496157.00-25.36
CAediting_1086599chr16_10924495_+ENSG00000179583.16ENST00000618327hsa-miR-6813-3p10924490109244967mer-m81092447710924497140.00-10.68
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618207hsa-miR-6771-5p10924487109244948mer-1a1092447510924494148.00-23.97
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618327hsa-miR-6771-5p10924487109244948mer-1a1092447510924494148.00-23.97
CAediting_1086600chr16_10924507_+ENSG00000179583.16ENST00000618207hsa-miR-106a-3p10924503109245097mer-1a1092448810924509141.00-16.54
CAediting_1086600chr16_10924507_+ENSG00000179583.16ENST00000618207hsa-miR-432710924505109245117mer-m81092449410924512140.00-12.39
CAediting_1086600chr16_10924507_+ENSG00000179583.16ENST00000618327hsa-miR-106a-3p10924503109245097mer-1a1092448810924509141.00-16.54
CAediting_1086600chr16_10924507_+ENSG00000179583.16ENST00000618327hsa-miR-432710924505109245117mer-m81092449410924512140.00-12.39

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618207hsa-miR-1273h-5p10924486109244938mer-1a1092447410924493151-19.49
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000618207hsa-miR-20b-3p10924369109243757mer-m81092435410924376153-18.18
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618207hsa-miR-30b-3p10924486109244938mer-1a1092447210924493155-16.01
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618207hsa-miR-316510924471109244777mer-m81092445910924478145-16.11
CAediting_1086576chr16_10924289_+ENSG00000179583.16ENST00000618207hsa-miR-324-3p10924286109242927mer-m81092427110924293148-24.1
CAediting_1086593chr16_10924467_+ENSG00000179583.16ENST00000618207hsa-miR-3622a-3p10924464109244718mer-1a1092445010924471144-13.56
CAediting_1086593chr16_10924467_+ENSG00000179583.16ENST00000618207hsa-miR-3622b-3p10924464109244718mer-1a1092445110924471153-19.35
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618207hsa-miR-3664-5p10924256109242627mer-m81092424210924263150-14.83
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618207hsa-miR-3689a-3p10924486109244938mer-1a1092447210924493149-22.05
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618207hsa-miR-3689b-3p10924486109244938mer-1a1092447210924493149-22.1
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618207hsa-miR-3689c10924486109244938mer-1a1092447210924493149-22.1
CAediting_1086581chr16_10924351_+ENSG00000179583.16ENST00000618207hsa-miR-447810924348109243547mer-m81092433810924355154-25.02
CAediting_1086596chr16_10924485_+ENSG00000179583.16ENST00000618207hsa-miR-447810924482109244887mer-m81092447310924489154-23.41
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618207hsa-miR-452210924257109242637mer-m81092424410924264152-14.88
CAediting_1086589chr16_10924416_+ENSG00000179583.16ENST00000618207hsa-miR-4684-5p10924413109244197mer-m81092439810924420155-13.31
CAediting_1086596chr16_10924485_+ENSG00000179583.16ENST00000618207hsa-miR-485-5p10924483109244897mer-m81092446910924490149-16.76
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618207hsa-miR-5189-5p10924271109242777mer-m81092425410924278152-22.99
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000618207hsa-miR-550a-3-5p10924373109243797mer-m81092436110924380143-16.67
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000618207hsa-miR-550a-5p10924373109243797mer-m81092435810924380143-18.93
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000618207hsa-miR-550a-5p10924373109243797mer-m81092435810924380143-18.93
CAediting_1086584chr16_10924370_+ENSG00000179583.16ENST00000618207hsa-miR-5588-3p10924365109243728mer-1a1092435310924372148-14.95
CAediting_1086583chr16_10924363_+ENSG00000179583.16ENST00000618207hsa-miR-569010924360109243667mer-m81092434710924367145-16.75
CAediting_1086589chr16_10924416_+ENSG00000179583.16ENST00000618207hsa-miR-593-3p10924415109244217mer-1a1092440310924421140-19.02
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618207hsa-miR-61210924271109242777mer-m81092425610924278145-22.7
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618207hsa-miR-66110924273109242797mer-m81092425710924280142-21.04
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000618207hsa-miR-6741-5p10924376109243827mer-m81092436210924383154-27.31
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618207hsa-miR-674510924472109244798mer-1a1092445510924479146-22.37
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000618207hsa-miR-6748-5p10924377109243837mer-m81092436110924384142-19.53
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618207hsa-miR-6748-5p10924474109244807mer-m81092446110924481149-22.28
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618207hsa-miR-6756-5p10924473109244797mer-1a1092445510924479144-27.62
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000618207hsa-miR-6769a-5p10924378109243858mer-1a1092436310924385141-21.54
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000618207hsa-miR-6769b-5p10924378109243858mer-1a1092436310924385145-22.59
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618207hsa-miR-6779-5p10924486109244938mer-1a1092447510924493152-22.88
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618207hsa-miR-6780a-5p10924486109244938mer-1a1092447010924493148-20.23
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618207hsa-miR-686010924271109242777mer-m81092425710924278150-20.9
CAediting_1086574chr16_10924267_+ENSG00000179583.16ENST00000618207hsa-miR-6864-3p10924260109242667mer-m81092424610924267148-15.76
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618207hsa-miR-6888-3p10924254109242607mer-m81092424110924261143-9.14
CAediting_1086596chr16_10924485_+ENSG00000179583.16ENST00000618207hsa-miR-7160-5p10924480109244867mer-m81092447010924487148-19.34
CAediting_1086584chr16_10924370_+ENSG00000179583.16ENST00000618207hsa-miR-797710924363109243697mer-m81092435310924370142-13.37
CAediting_1086594chr16_10924472_+ENSG00000179583.16ENST00000618207hsa-miR-805610924471109244766mer1092445810924477142-18.61
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618207hsa-miR-805610924471109244766mer1092445810924477142-18.61
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618207hsa-miR-887-5p10924487109244948mer-1a1092447510924494143-13.53
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618207hsa-miR-887-5p10924487109244948mer-1a1092447510924494143-13.53
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618207hsa-miR-939-3p10924272109242787mer-m81092425910924279141-15.9
CAediting_1086590chr16_10924433_+ENSG00000179583.16ENST00000618207hsa-miR-942-3p10924429109244357mer-m81092441610924436152-14.56
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618327hsa-miR-1273h-5p10924486109244938mer-1a1092447410924493151-19.49
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000618327hsa-miR-20b-3p10924369109243757mer-m81092435410924376153-18.18
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618327hsa-miR-30b-3p10924486109244938mer-1a1092447210924493155-16.01
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618327hsa-miR-316510924471109244777mer-m81092445910924478145-16.11
CAediting_1086576chr16_10924289_+ENSG00000179583.16ENST00000618327hsa-miR-324-3p10924286109242927mer-m81092427110924293148-24.1
CAediting_1086593chr16_10924467_+ENSG00000179583.16ENST00000618327hsa-miR-3622a-3p10924464109244718mer-1a1092445010924471144-13.56
CAediting_1086593chr16_10924467_+ENSG00000179583.16ENST00000618327hsa-miR-3622b-3p10924464109244718mer-1a1092445110924471153-19.35
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618327hsa-miR-3664-5p10924256109242627mer-m81092424210924263150-14.83
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618327hsa-miR-3689a-3p10924486109244938mer-1a1092447210924493149-22.05
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618327hsa-miR-3689b-3p10924486109244938mer-1a1092447210924493149-22.1
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618327hsa-miR-3689c10924486109244938mer-1a1092447210924493149-22.1
CAediting_1086581chr16_10924351_+ENSG00000179583.16ENST00000618327hsa-miR-447810924348109243547mer-m81092433810924355154-25.02
CAediting_1086596chr16_10924485_+ENSG00000179583.16ENST00000618327hsa-miR-447810924482109244887mer-m81092447310924489154-23.41
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618327hsa-miR-452210924257109242637mer-m81092424410924264152-14.88
CAediting_1086589chr16_10924416_+ENSG00000179583.16ENST00000618327hsa-miR-4684-5p10924413109244197mer-m81092439810924420155-13.31
CAediting_1086596chr16_10924485_+ENSG00000179583.16ENST00000618327hsa-miR-485-5p10924483109244897mer-m81092446910924490149-16.76
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618327hsa-miR-5189-5p10924271109242777mer-m81092425410924278152-22.99
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000618327hsa-miR-550a-3-5p10924373109243797mer-m81092436110924380143-16.67
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000618327hsa-miR-550a-5p10924373109243797mer-m81092435810924380143-18.93
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000618327hsa-miR-550a-5p10924373109243797mer-m81092435810924380143-18.93
CAediting_1086584chr16_10924370_+ENSG00000179583.16ENST00000618327hsa-miR-5588-3p10924365109243728mer-1a1092435310924372148-14.95
CAediting_1086583chr16_10924363_+ENSG00000179583.16ENST00000618327hsa-miR-569010924360109243667mer-m81092434710924367145-16.75
CAediting_1086589chr16_10924416_+ENSG00000179583.16ENST00000618327hsa-miR-593-3p10924415109244217mer-1a1092440310924421140-19.02
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618327hsa-miR-61210924271109242777mer-m81092425610924278145-22.7
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618327hsa-miR-66110924273109242797mer-m81092425710924280142-21.04
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000618327hsa-miR-6741-5p10924376109243827mer-m81092436210924383154-27.31
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618327hsa-miR-674510924472109244798mer-1a1092445510924479146-22.37
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000618327hsa-miR-6748-5p10924377109243837mer-m81092436110924384142-19.53
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618327hsa-miR-6748-5p10924474109244807mer-m81092446110924481149-22.28
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618327hsa-miR-6756-5p10924473109244797mer-1a1092445510924479144-27.62
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000618327hsa-miR-6769a-5p10924378109243858mer-1a1092436310924385141-21.54
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000618327hsa-miR-6769b-5p10924378109243858mer-1a1092436310924385145-22.59
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618327hsa-miR-6779-5p10924486109244938mer-1a1092447510924493152-22.88
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618327hsa-miR-6780a-5p10924486109244938mer-1a1092447010924493148-20.23
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618327hsa-miR-686010924271109242777mer-m81092425710924278150-20.9
CAediting_1086574chr16_10924267_+ENSG00000179583.16ENST00000618327hsa-miR-6864-3p10924260109242667mer-m81092424610924267148-15.76
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000618327hsa-miR-6888-3p10924254109242607mer-m81092424110924261143-9.14
CAediting_1086596chr16_10924485_+ENSG00000179583.16ENST00000618327hsa-miR-7160-5p10924480109244867mer-m81092447010924487148-19.34
CAediting_1086584chr16_10924370_+ENSG00000179583.16ENST00000618327hsa-miR-797710924363109243697mer-m81092435310924370142-13.37
CAediting_1086594chr16_10924472_+ENSG00000179583.16ENST00000618327hsa-miR-805610924471109244766mer1092445810924477142-18.61
CAediting_1086595chr16_10924476_+ENSG00000179583.16ENST00000618327hsa-miR-805610924471109244766mer1092445810924477142-18.61
CAediting_1086597chr16_10924493_+ENSG00000179583.16ENST00000618327hsa-miR-887-5p10924487109244948mer-1a1092447510924494143-13.53
CAediting_1086598chr16_10924494_+ENSG00000179583.16ENST00000618327hsa-miR-887-5p10924487109244948mer-1a1092447510924494143-13.53
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000618327hsa-miR-939-3p10924272109242787mer-m81092425910924279141-15.9
CAediting_1086590chr16_10924433_+ENSG00000179583.16ENST00000618327hsa-miR-942-3p10924429109244357mer-m81092441610924436152-14.56
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000381835hsa-miR-20b-3p10924369109243757mer-m81092435410924376153-18.18
CAediting_1086576chr16_10924289_+ENSG00000179583.16ENST00000381835hsa-miR-324-3p10924286109242927mer-m81092427110924293148-24.1
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000381835hsa-miR-3664-5p10924256109242627mer-m81092424210924263150-14.83
CAediting_1086581chr16_10924351_+ENSG00000179583.16ENST00000381835hsa-miR-447810924348109243547mer-m81092433810924355154-25.02
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000381835hsa-miR-452210924257109242637mer-m81092424410924264152-14.88
CAediting_1086589chr16_10924416_+ENSG00000179583.16ENST00000381835hsa-miR-4684-5p10924413109244197mer-m81092439810924420155-13.31
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000381835hsa-miR-5189-5p10924271109242777mer-m81092425410924278152-22.99
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000381835hsa-miR-550a-3-5p10924373109243797mer-m81092436110924380143-16.67
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000381835hsa-miR-550a-5p10924373109243797mer-m81092435810924380143-18.93
CAediting_1086585chr16_10924375_+ENSG00000179583.16ENST00000381835hsa-miR-550a-5p10924373109243797mer-m81092435810924380143-18.93
CAediting_1086584chr16_10924370_+ENSG00000179583.16ENST00000381835hsa-miR-5588-3p10924365109243728mer-1a1092435310924372148-14.95
CAediting_1086583chr16_10924363_+ENSG00000179583.16ENST00000381835hsa-miR-569010924360109243667mer-m81092434710924367145-16.75
CAediting_1086589chr16_10924416_+ENSG00000179583.16ENST00000381835hsa-miR-593-3p10924415109244217mer-1a1092440310924421140-19.02
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000381835hsa-miR-61210924271109242777mer-m81092425610924278145-22.7
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000381835hsa-miR-66110924273109242797mer-m81092425710924280142-21.04
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000381835hsa-miR-6741-5p10924376109243827mer-m81092436210924383154-27.31
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000381835hsa-miR-6748-5p10924377109243837mer-m81092436110924384142-19.53
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000381835hsa-miR-6769a-5p10924378109243858mer-1a1092436310924385141-21.54
CAediting_1086586chr16_10924383_+ENSG00000179583.16ENST00000381835hsa-miR-6769b-5p10924378109243858mer-1a1092436310924385145-22.59
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000381835hsa-miR-686010924271109242777mer-m81092425710924278150-20.9
CAediting_1086574chr16_10924267_+ENSG00000179583.16ENST00000381835hsa-miR-6864-3p10924260109242667mer-m81092424610924267148-15.76
CAediting_1086573chr16_10924261_+ENSG00000179583.16ENST00000381835hsa-miR-6888-3p10924254109242607mer-m81092424110924261143-9.14
CAediting_1086584chr16_10924370_+ENSG00000179583.16ENST00000381835hsa-miR-797710924363109243697mer-m81092435310924370142-13.37
CAediting_1086575chr16_10924277_+ENSG00000179583.16ENST00000381835hsa-miR-939-3p10924272109242787mer-m81092425910924279141-15.9
CAediting_1086590chr16_10924433_+ENSG00000179583.16ENST00000381835hsa-miR-942-3p10924429109244357mer-m81092441610924436152-14.56

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000179583.16ENST00000618207hsa-miR-624-3p10924888109248947mer-m81092487610924895152-14.66
CAediting_980496chr14_31014685_-ENSG00000179583.16ENST00000618327hsa-miR-624-3p10924888109248947mer-m81092487610924895152-14.66
CAediting_1054808chr15_66496985_-ENSG00000179583.16ENST00000618207hsa-miR-451210915584109155907mer-m81091557110915591146-21.47
CAediting_524911chr7_5495852_-ENSG00000179583.16ENST00000618207hsa-miR-589-3p10923312109233187mer-m81092329710923319150-18
CAediting_1054808chr15_66496985_-ENSG00000179583.16ENST00000618207hsa-miR-451210924207109242137mer-m81092419310924214140-13.85
CAediting_1160181chr17_7017644_-ENSG00000179583.16ENST00000618207hsa-miR-195-3p10924697109247026mer1092468310924703140-13.33
CAediting_86358chr1_109598906_+ENSG00000179583.16ENST00000618207hsa-miR-197-5p10924111109241188mer-1a1092409510924118144-19.76
CAediting_86358chr1_109598906_+ENSG00000179583.16ENST00000618207hsa-miR-197-5p10924472109244798mer-1a1092445110924479142-24.89
CAediting_86358chr1_109598906_+ENSG00000179583.16ENST00000618207hsa-miR-197-5p10924548109245547mer-m81092453310924555156-21.9
CAediting_228905chr2_188297554_+ENSG00000179583.16ENST00000618207hsa-miR-561-3p10924452109244587mer-m81092443610924459161-16.51
CAediting_524911chr7_5495852_-ENSG00000179583.16ENST00000618207hsa-miR-589-3p10924915109249217mer-m81092490210924922152-23.96
CAediting_524911chr7_5495852_-ENSG00000179583.16ENST00000618207hsa-miR-589-3p10924034109240407mer-m81092401810924041164-21.14
CAediting_1054808chr15_66496985_-ENSG00000179583.16ENST00000618327hsa-miR-451210924207109242137mer-m81092419310924214140-13.85
CAediting_1160181chr17_7017644_-ENSG00000179583.16ENST00000618327hsa-miR-195-3p10924697109247026mer1092468310924703140-13.33
CAediting_86358chr1_109598906_+ENSG00000179583.16ENST00000618327hsa-miR-197-5p10924111109241188mer-1a1092409510924118144-19.76
CAediting_86358chr1_109598906_+ENSG00000179583.16ENST00000618327hsa-miR-197-5p10924472109244798mer-1a1092445110924479142-24.89
CAediting_86358chr1_109598906_+ENSG00000179583.16ENST00000618327hsa-miR-197-5p10924548109245547mer-m81092453310924555156-21.9
CAediting_228905chr2_188297554_+ENSG00000179583.16ENST00000618327hsa-miR-561-3p10924452109244587mer-m81092443610924459161-16.51
CAediting_524911chr7_5495852_-ENSG00000179583.16ENST00000618327hsa-miR-589-3p10924915109249217mer-m81092490210924922152-23.96
CAediting_524911chr7_5495852_-ENSG00000179583.16ENST00000618327hsa-miR-589-3p10924034109240407mer-m81092401810924041164-21.14
CAediting_1054808chr15_66496985_-ENSG00000179583.16ENST00000381835hsa-miR-451210924207109242137mer-m81092419310924214140-13.85
CAediting_86358chr1_109598906_+ENSG00000179583.16ENST00000381835hsa-miR-197-5p10924111109241188mer-1a1092409510924118144-19.76
CAediting_524911chr7_5495852_-ENSG00000179583.16ENST00000381835hsa-miR-589-3p10924034109240407mer-m81092401810924041164-21.14
CAediting_86358chr1_109598906_+ENSG00000179583.16ENST00000571186hsa-miR-197-5p10902093109020997mer-m81090207810902100150-23.62
CAediting_1524209chrX_134546392_-ENSG00000179583.16ENST00000618207hsa-miR-503-5p10922448109224558mer-1a1092243510922455150-24.48

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CIITA

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CIITA

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for CIITA

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for CIITA

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for CIITA

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CIITA

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
CIITAC2931418Bare lymphocyte syndrome 25CTD_human;ORPHANET;UNIPROT
CIITAC0001403Addison Disease1CTD_human
CIITAC1859534Bare Lymphocyte Syndrome, Type II, Complementation Group A1GENOMICS_ENGLAND
CIITAC2930967Gastro-enteropancreatic neuroendocrine tumor1CTD_human