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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CD46 (CAeditome ID:4179)

Gene summary for CD46

check button Gene summary
Gene informationGene symbol

CD46

Gene ID

4179

Gene nameCD46 molecule
SynonymsAHUS2|MCP|MIC10|TLX|TRA2.10
Cytomap

1q32.2

Type of geneprotein-coding
Descriptionmembrane cofactor proteinCD46 antigen, complement regulatory proteinCD46 molecule, complement regulatory proteinantigen identified by monoclonal antibody TRA-2-10complement membrane cofactor proteinmeasles virus receptormembrane cofactor protein (CD
Modification date20210518
UniProtAcc

P15529

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CD46

GO:0008593

Membrane cofactor protein

23086448

CD46

GO:0010629

Membrane cofactor protein

23086448

CD46

GO:0032733

Membrane cofactor protein

12540904

CD46

GO:0032733

Membrane cofactor protein

23086448

CD46

GO:0035581

Membrane cofactor protein

23086448

CD46

GO:0042102

Membrane cofactor protein

12540904

CD46

GO:0043382

Membrane cofactor protein

12540904

CD46

GO:0045591

Membrane cofactor protein

12540904

CD46

GO:0071636

Membrane cofactor protein

12540904

CD46

GO:0005886

Membrane cofactor protein

20534589

CD46

GO:0009986

Membrane cofactor protein

23086448


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RNA A-to-I events for CD46

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000117335.17
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_136334(207768967, +), CAediting_136335(207768977, +), CAediting_136336(207768996, +), CAediting_136337(207768998, +), CAediting_136338(207769004, +), CAediting_136339(207769005, +), CAediting_136340(207769007, +), CAediting_136341(207769010, +), CAediting_136342(207769012, +), CAediting_136343(207769013, +), CAediting_136344(207769021, +), CAediting_136345(207769040, +), CAediting_136346(207769043, +), CAediting_136347(207769048, +), CAediting_136348(207769050, +), CAediting_136349(207769051, +), CAediting_136350(207769056, +), CAediting_136351(207769057, +), CAediting_136352(207769080, +), CAediting_136353(207769081, +), CAediting_136354(207769082, +), CAediting_136355(207769087, +), CAediting_136356(207769093, +), CAediting_136357(207769096, +), CAediting_136358(207769097, +), CAediting_136359(207769098, +), CAediting_136360(207769099, +), CAediting_136361(207769100, +), CAediting_136362(207769102, +), CAediting_136363(207769104, +), CAediting_136364(207769105, +), CAediting_136365(207769106, +), CAediting_136366(207769107, +), CAediting_136367(207769108, +), CAediting_136368(207769111, +), CAediting_136369(207769131, +), CAediting_136370(207769137, +), CAediting_136371(207769138, +), CAediting_136372(207769143, +), CAediting_136373(207769154, +), CAediting_136374(207769160, +), CAediting_136375(207769167, +), CAediting_136376(207769170, +), CAediting_136377(207769178, +), CAediting_136378(207769179, +), CAediting_136379(207769190, +), CAediting_136380(207769192, +), CAediting_136381(207769199, +), CAediting_136382(207769203, +), CAediting_136383(207769207, +), CAediting_136384(207769208, +), CAediting_136385(207769213, +), CAediting_136386(207769218, +), CAediting_136387(207769223, +), CAediting_136388(207769240, +), CAediting_136389(207769242, +), CAediting_136390(207769260, +), CAediting_136391(207769265, +), CAediting_136392(207769757, +), CAediting_136393(207769782, +), CAediting_136394(207769784, +), CAediting_136395(207769786, +), CAediting_136396(207769788, +), CAediting_136397(207769802, +), CAediting_136398(207769806, +), CAediting_136399(207769818, +), CAediting_136400(207769837, +), CAediting_136401(207769842, +), CAediting_136402(207769843, +), CAediting_136403(207769862, +), CAediting_136404(207769863, +), CAediting_136405(207769883, +), CAediting_136406(207769885, +), CAediting_136407(207769891, +), CAediting_136408(207769895, +), CAediting_136409(207769902, +), CAediting_136410(207769905, +), CAediting_136411(207769907, +), CAediting_136412(207769911, +), CAediting_136413(207769918, +), CAediting_136414(207769931, +), CAediting_136415(207769940, +), CAediting_136416(207769949, +), CAediting_136417(207769987, +), CAediting_136418(207769988, +), CAediting_136419(207769995, +), CAediting_136420(207770000, +), CAediting_136421(207770001, +), CAediting_136422(207770005, +), CAediting_136423(207770009, +), CAediting_136424(207770037, +), CAediting_136425(207770040, +), CAediting_136426(207770042, +), CAediting_136427(207770056, +), CAediting_136428(207770109, +), CAediting_136429(207787093, +), CAediting_136430(207787115, +), CAediting_136431(207787127, +), CAediting_136432(207787135, +), CAediting_136433(207787136, +), CAediting_136434(207787152, +), CAediting_136435(207787172, +), CAediting_136436(207787176, +), CAediting_136437(207787188, +), CAediting_136438(207787197, +), CAediting_136439(207787200, +), CAediting_136440(207787210, +), CAediting_136441(207787281, +), CAediting_136442(207787306, +), CAediting_136443(207787310, +), CAediting_136444(207787340, +), CAediting_136445(207787346, +), CAediting_136446(207788253, +), CAediting_136447(207788261, +), CAediting_136448(207788262, +), CAediting_136449(207788267, +), CAediting_136450(207788270, +), CAediting_136451(207788292, +), CAediting_136452(207788305, +), CAediting_136453(207788313, +), CAediting_136454(207788314, +), CAediting_136455(207788329, +), CAediting_136456(207788397, +), CAediting_136457(207788403, +), CAediting_136458(207788415, +), CAediting_136459(207788428, +), CAediting_136460(207788460, +), CAediting_136461(207788470, +), CAediting_136462(207788488, +), CAediting_136463(207788498, +), CAediting_136464(207789777, +), CAediting_136465(207789778, +), CAediting_136466(207789783, +), CAediting_136467(207789805, +), CAediting_136468(207792005, +), CAediting_136469(207792019, +), CAediting_136470(207792021, +), CAediting_136471(207792025, +), CAediting_136472(207792027, +), CAediting_136473(207792028, +), CAediting_136474(207792033, +), CAediting_136475(207792090, +), CAediting_136476(207792091, +), CAediting_136477(207792098, +), CAediting_136478(207792100, +), CAediting_136479(207792129, +), CAediting_136480(207792149, +), CAediting_136481(207792155, +), CAediting_136482(207792156, +), CAediting_136483(207792165, +), CAediting_136484(207792184, +), CAediting_136485(207792196, +), CAediting_136486(207792197, +), CAediting_136487(207792204, +), CAediting_136488(207792232, +), CAediting_136489(207792239, +), CAediting_136490(207792261, +), CAediting_136491(207792266, +), CAediting_136492(207792281, +), CAediting_136493(207792295, +), CAediting_136494(207792297, +), CAediting_136495(207792298, +), CAediting_136496(207794580, +),

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RNA editing positional annotations for CD46 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_136334chr1_207768967_+ncRNA_exonic
CAediting_136335chr1_207768977_+ncRNA_exonic
CAediting_136336chr1_207768996_+ncRNA_exonic
CAediting_136337chr1_207768998_+ncRNA_exonic
CAediting_136338chr1_207769004_+ncRNA_exonic
CAediting_136339chr1_207769005_+ncRNA_exonic
CAediting_136340chr1_207769007_+ncRNA_exonic
CAediting_136341chr1_207769010_+ncRNA_exonic
CAediting_136342chr1_207769012_+ncRNA_exonic
CAediting_136343chr1_207769013_+ncRNA_exonic
CAediting_136344chr1_207769021_+ncRNA_exonic
CAediting_136345chr1_207769040_+ncRNA_exonic
CAediting_136346chr1_207769043_+ncRNA_exonic
CAediting_136347chr1_207769048_+ncRNA_exonic
CAediting_136348chr1_207769050_+ncRNA_exonic
CAediting_136349chr1_207769051_+ncRNA_exonic
CAediting_136350chr1_207769056_+ncRNA_exonic
CAediting_136351chr1_207769057_+ncRNA_exonic
CAediting_136352chr1_207769080_+ncRNA_exonic
CAediting_136353chr1_207769081_+ncRNA_exonic
CAediting_136354chr1_207769082_+ncRNA_exonic
CAediting_136355chr1_207769087_+ncRNA_exonic
CAediting_136356chr1_207769093_+ncRNA_exonic
CAediting_136357chr1_207769096_+ncRNA_exonic
CAediting_136358chr1_207769097_+ncRNA_exonic
CAediting_136359chr1_207769098_+ncRNA_exonic
CAediting_136360chr1_207769099_+ncRNA_exonic
CAediting_136361chr1_207769100_+ncRNA_exonic
CAediting_136362chr1_207769102_+ncRNA_exonic
CAediting_136363chr1_207769104_+ncRNA_exonic
CAediting_136364chr1_207769105_+ncRNA_exonic
CAediting_136365chr1_207769106_+ncRNA_exonic
CAediting_136366chr1_207769107_+ncRNA_exonic
CAediting_136367chr1_207769108_+ncRNA_exonic
CAediting_136368chr1_207769111_+ncRNA_exonic
CAediting_136369chr1_207769131_+ncRNA_exonic
CAediting_136370chr1_207769137_+ncRNA_exonic
CAediting_136371chr1_207769138_+ncRNA_exonic
CAediting_136372chr1_207769143_+ncRNA_exonic
CAediting_136373chr1_207769154_+ncRNA_exonic
CAediting_136374chr1_207769160_+ncRNA_exonic
CAediting_136375chr1_207769167_+ncRNA_exonic
CAediting_136376chr1_207769170_+ncRNA_exonic
CAediting_136377chr1_207769178_+ncRNA_exonic
CAediting_136378chr1_207769179_+ncRNA_exonic
CAediting_136379chr1_207769190_+ncRNA_exonic
CAediting_136380chr1_207769192_+ncRNA_exonic
CAediting_136381chr1_207769199_+ncRNA_exonic
CAediting_136382chr1_207769203_+ncRNA_exonic
CAediting_136383chr1_207769207_+ncRNA_exonic
CAediting_136384chr1_207769208_+ncRNA_exonic
CAediting_136385chr1_207769213_+ncRNA_exonic
CAediting_136386chr1_207769218_+ncRNA_exonic
CAediting_136387chr1_207769223_+ncRNA_exonic
CAediting_136388chr1_207769240_+ncRNA_exonic
CAediting_136389chr1_207769242_+ncRNA_exonic
CAediting_136390chr1_207769260_+ncRNA_exonic
CAediting_136391chr1_207769265_+ncRNA_exonic
CAediting_136392chr1_207769757_+ncRNA_exonic
CAediting_136393chr1_207769782_+ncRNA_exonic
CAediting_136394chr1_207769784_+ncRNA_exonic
CAediting_136395chr1_207769786_+ncRNA_exonic
CAediting_136396chr1_207769788_+ncRNA_exonic
CAediting_136397chr1_207769802_+ncRNA_exonic
CAediting_136398chr1_207769806_+ncRNA_exonic
CAediting_136399chr1_207769818_+ncRNA_exonic
CAediting_136400chr1_207769837_+ncRNA_exonic
CAediting_136401chr1_207769842_+ncRNA_exonic
CAediting_136402chr1_207769843_+ncRNA_exonic
CAediting_136403chr1_207769862_+ncRNA_exonic
CAediting_136404chr1_207769863_+ncRNA_exonic
CAediting_136405chr1_207769883_+ncRNA_exonic
CAediting_136406chr1_207769885_+ncRNA_exonic
CAediting_136407chr1_207769891_+ncRNA_exonic
CAediting_136408chr1_207769895_+ncRNA_exonic
CAediting_136409chr1_207769902_+ncRNA_exonic
CAediting_136410chr1_207769905_+ncRNA_exonic
CAediting_136411chr1_207769907_+ncRNA_exonic
CAediting_136412chr1_207769911_+ncRNA_exonic
CAediting_136413chr1_207769918_+ncRNA_exonic
CAediting_136414chr1_207769931_+ncRNA_exonic
CAediting_136415chr1_207769940_+ncRNA_exonic
CAediting_136416chr1_207769949_+ncRNA_exonic
CAediting_136417chr1_207769987_+ncRNA_exonic
CAediting_136418chr1_207769988_+ncRNA_exonic
CAediting_136419chr1_207769995_+ncRNA_exonic
CAediting_136420chr1_207770000_+ncRNA_exonic
CAediting_136421chr1_207770001_+ncRNA_exonic
CAediting_136422chr1_207770005_+ncRNA_exonic
CAediting_136423chr1_207770009_+ncRNA_exonic
CAediting_136424chr1_207770037_+ncRNA_exonic
CAediting_136425chr1_207770040_+ncRNA_exonic
CAediting_136426chr1_207770042_+ncRNA_exonic
CAediting_136427chr1_207770056_+ncRNA_exonic
CAediting_136428chr1_207770109_+ncRNA_exonic
CAediting_136429chr1_207787093_+ncRNA_intronic
CAediting_136430chr1_207787115_+ncRNA_intronic
CAediting_136431chr1_207787127_+ncRNA_intronic
CAediting_136432chr1_207787135_+ncRNA_intronic
CAediting_136433chr1_207787136_+ncRNA_intronic
CAediting_136434chr1_207787152_+ncRNA_intronic
CAediting_136435chr1_207787172_+ncRNA_intronic
CAediting_136436chr1_207787176_+ncRNA_intronic
CAediting_136437chr1_207787188_+ncRNA_intronic
CAediting_136438chr1_207787197_+ncRNA_intronic
CAediting_136439chr1_207787200_+ncRNA_intronic
CAediting_136440chr1_207787210_+ncRNA_intronic
CAediting_136441chr1_207787281_+ncRNA_intronic
CAediting_136442chr1_207787306_+ncRNA_intronic
CAediting_136443chr1_207787310_+ncRNA_intronic
CAediting_136444chr1_207787340_+ncRNA_intronic
CAediting_136445chr1_207787346_+ncRNA_intronic
CAediting_136446chr1_207788253_+ncRNA_intronic
CAediting_136447chr1_207788261_+ncRNA_intronic
CAediting_136448chr1_207788262_+ncRNA_intronic
CAediting_136449chr1_207788267_+ncRNA_intronic
CAediting_136450chr1_207788270_+ncRNA_intronic
CAediting_136451chr1_207788292_+ncRNA_intronic
CAediting_136452chr1_207788305_+ncRNA_intronic
CAediting_136453chr1_207788313_+ncRNA_intronic
CAediting_136454chr1_207788314_+ncRNA_intronic
CAediting_136455chr1_207788329_+ncRNA_intronic
CAediting_136456chr1_207788397_+ncRNA_intronic
CAediting_136457chr1_207788403_+ncRNA_intronic
CAediting_136458chr1_207788415_+ncRNA_intronic
CAediting_136459chr1_207788428_+ncRNA_intronic
CAediting_136460chr1_207788460_+ncRNA_intronic
CAediting_136461chr1_207788470_+ncRNA_intronic
CAediting_136462chr1_207788488_+ncRNA_intronic
CAediting_136463chr1_207788498_+ncRNA_intronic
CAediting_136464chr1_207789777_+ncRNA_intronic
CAediting_136465chr1_207789778_+ncRNA_intronic
CAediting_136466chr1_207789783_+ncRNA_intronic
CAediting_136467chr1_207789805_+ncRNA_intronic
CAediting_136468chr1_207792005_+ncRNA_intronic
CAediting_136469chr1_207792019_+ncRNA_intronic
CAediting_136470chr1_207792021_+ncRNA_intronic
CAediting_136471chr1_207792025_+ncRNA_intronic
CAediting_136472chr1_207792027_+ncRNA_intronic
CAediting_136473chr1_207792028_+ncRNA_intronic
CAediting_136474chr1_207792033_+ncRNA_intronic
CAediting_136475chr1_207792090_+ncRNA_intronic
CAediting_136476chr1_207792091_+ncRNA_intronic
CAediting_136477chr1_207792098_+ncRNA_intronic
CAediting_136478chr1_207792100_+ncRNA_intronic
CAediting_136479chr1_207792129_+ncRNA_intronic
CAediting_136480chr1_207792149_+ncRNA_intronic
CAediting_136481chr1_207792155_+ncRNA_intronic
CAediting_136482chr1_207792156_+ncRNA_intronic
CAediting_136483chr1_207792165_+ncRNA_intronic
CAediting_136484chr1_207792184_+ncRNA_intronic
CAediting_136485chr1_207792196_+ncRNA_intronic
CAediting_136486chr1_207792197_+ncRNA_intronic
CAediting_136487chr1_207792204_+ncRNA_intronic
CAediting_136488chr1_207792232_+ncRNA_intronic
CAediting_136489chr1_207792239_+ncRNA_intronic
CAediting_136490chr1_207792261_+ncRNA_intronic
CAediting_136491chr1_207792266_+ncRNA_intronic
CAediting_136492chr1_207792281_+ncRNA_intronic
CAediting_136493chr1_207792295_+ncRNA_intronic
CAediting_136494chr1_207792297_+ncRNA_intronic
CAediting_136495chr1_207792298_+ncRNA_intronic
CAediting_136496chr1_207794580_+ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_136336chr1_207768996_+SINEAluAluSg4
CAediting_136337chr1_207768998_+SINEAluAluSg4
CAediting_136338chr1_207769004_+SINEAluAluSg4
CAediting_136339chr1_207769005_+SINEAluAluSg4
CAediting_136340chr1_207769007_+SINEAluAluSg4
CAediting_136341chr1_207769010_+SINEAluAluSg4
CAediting_136342chr1_207769012_+SINEAluAluSg4
CAediting_136343chr1_207769013_+SINEAluAluSg4
CAediting_136344chr1_207769021_+SINEAluAluSg4
CAediting_136345chr1_207769040_+SINEAluAluSg4
CAediting_136346chr1_207769043_+SINEAluAluSg4
CAediting_136347chr1_207769048_+SINEAluAluSg4
CAediting_136348chr1_207769050_+SINEAluAluSg4
CAediting_136349chr1_207769051_+SINEAluAluSg4
CAediting_136350chr1_207769056_+SINEAluAluSg4
CAediting_136351chr1_207769057_+SINEAluAluSg4
CAediting_136352chr1_207769080_+SINEAluAluSg4
CAediting_136353chr1_207769081_+SINEAluAluSg4
CAediting_136354chr1_207769082_+SINEAluAluSg4
CAediting_136355chr1_207769087_+SINEAluAluSg4
CAediting_136356chr1_207769093_+SINEAluAluSg4
CAediting_136357chr1_207769096_+SINEAluAluSg4
CAediting_136358chr1_207769097_+SINEAluAluSg4
CAediting_136359chr1_207769098_+SINEAluAluSg4
CAediting_136360chr1_207769099_+SINEAluAluSg4
CAediting_136361chr1_207769100_+SINEAluAluSg4
CAediting_136362chr1_207769102_+SINEAluAluSg4
CAediting_136363chr1_207769104_+SINEAluAluSg4
CAediting_136364chr1_207769105_+SINEAluAluSg4
CAediting_136365chr1_207769106_+SINEAluAluSg4
CAediting_136366chr1_207769107_+SINEAluAluSg4
CAediting_136367chr1_207769108_+SINEAluAluSg4
CAediting_136368chr1_207769111_+SINEAluAluSg4
CAediting_136369chr1_207769131_+SINEAluAluSg4
CAediting_136370chr1_207769137_+SINEAluAluSg4
CAediting_136371chr1_207769138_+SINEAluAluSg4
CAediting_136372chr1_207769143_+SINEAluAluSg4
CAediting_136373chr1_207769154_+SINEAluAluSg4
CAediting_136374chr1_207769160_+SINEAluAluSg4
CAediting_136375chr1_207769167_+SINEAluAluSg4
CAediting_136376chr1_207769170_+SINEAluAluSg4
CAediting_136377chr1_207769178_+SINEAluAluSg4
CAediting_136378chr1_207769179_+SINEAluAluSg4
CAediting_136379chr1_207769190_+SINEAluAluSg4
CAediting_136380chr1_207769192_+SINEAluAluSg4
CAediting_136381chr1_207769199_+SINEAluAluSg4
CAediting_136382chr1_207769203_+SINEAluAluSg4
CAediting_136383chr1_207769207_+SINEAluAluSg4
CAediting_136384chr1_207769208_+SINEAluAluSg4
CAediting_136385chr1_207769213_+SINEAluAluSg4
CAediting_136386chr1_207769218_+SINEAluAluSg4
CAediting_136387chr1_207769223_+SINEAluAluSg4
CAediting_136388chr1_207769240_+SINEAluAluSg4
CAediting_136389chr1_207769242_+SINEAluAluSg4
CAediting_136390chr1_207769260_+SINEAluAluSg4
CAediting_136391chr1_207769265_+SINEAluAluSg4
CAediting_136393chr1_207769782_+SINEAluAluSx1
CAediting_136394chr1_207769784_+SINEAluAluSx1
CAediting_136395chr1_207769786_+SINEAluAluSx1
CAediting_136396chr1_207769788_+SINEAluAluSx1
CAediting_136397chr1_207769802_+SINEAluAluSx1
CAediting_136398chr1_207769806_+SINEAluAluSx1
CAediting_136399chr1_207769818_+SINEAluAluSx1
CAediting_136400chr1_207769837_+SINEAluAluSx1
CAediting_136401chr1_207769842_+SINEAluAluSx1
CAediting_136402chr1_207769843_+SINEAluAluSx1
CAediting_136403chr1_207769862_+SINEAluAluSx1
CAediting_136404chr1_207769863_+SINEAluAluSx1
CAediting_136405chr1_207769883_+SINEAluAluSx1
CAediting_136406chr1_207769885_+SINEAluAluSx1
CAediting_136407chr1_207769891_+SINEAluAluSx1
CAediting_136408chr1_207769895_+SINEAluAluSx1
CAediting_136409chr1_207769902_+SINEAluAluSx1
CAediting_136410chr1_207769905_+SINEAluAluSx1
CAediting_136411chr1_207769907_+SINEAluAluSx1
CAediting_136412chr1_207769911_+SINEAluAluSx1
CAediting_136413chr1_207769918_+SINEAluAluSx1
CAediting_136414chr1_207769931_+SINEAluAluSx1
CAediting_136415chr1_207769940_+SINEAluAluSx1
CAediting_136416chr1_207769949_+SINEAluAluSx1
CAediting_136417chr1_207769987_+SINEAluAluSx1
CAediting_136418chr1_207769988_+SINEAluAluSx1
CAediting_136419chr1_207769995_+SINEAluAluSx1
CAediting_136420chr1_207770000_+SINEAluAluSx1
CAediting_136421chr1_207770001_+SINEAluAluSx1
CAediting_136422chr1_207770005_+SINEAluAluSx1
CAediting_136423chr1_207770009_+SINEAluAluSx1
CAediting_136424chr1_207770037_+SINEAluAluSx1
CAediting_136425chr1_207770040_+SINEAluAluSx1
CAediting_136426chr1_207770042_+SINEAluAluSx1
CAediting_136427chr1_207770056_+SINEAluAluSx1
CAediting_136429chr1_207787093_+SINEAluAluSx
CAediting_136430chr1_207787115_+SINEAluAluSx
CAediting_136431chr1_207787127_+SINEAluAluSx
CAediting_136432chr1_207787135_+SINEAluAluSx
CAediting_136433chr1_207787136_+SINEAluAluSx
CAediting_136434chr1_207787152_+SINEAluAluSx
CAediting_136435chr1_207787172_+SINEAluAluSx
CAediting_136436chr1_207787176_+SINEAluAluSx
CAediting_136437chr1_207787188_+SINEAluAluSx
CAediting_136438chr1_207787197_+SINEAluAluSx
CAediting_136439chr1_207787200_+SINEAluAluSx
CAediting_136440chr1_207787210_+SINEAluAluSx
CAediting_136441chr1_207787281_+SINEAluAluSx
CAediting_136442chr1_207787306_+SINEAluAluSx
CAediting_136443chr1_207787310_+SINEAluAluSx
CAediting_136444chr1_207787340_+SINEAluAluSx
CAediting_136445chr1_207787346_+SINEAluAluSx
CAediting_136446chr1_207788253_+SINEAluAluY
CAediting_136447chr1_207788261_+SINEAluAluY
CAediting_136448chr1_207788262_+SINEAluAluY
CAediting_136449chr1_207788267_+SINEAluAluY
CAediting_136450chr1_207788270_+SINEAluAluY
CAediting_136451chr1_207788292_+SINEAluAluY
CAediting_136452chr1_207788305_+SINEAluAluY
CAediting_136453chr1_207788313_+SINEAluAluY
CAediting_136454chr1_207788314_+SINEAluAluY
CAediting_136455chr1_207788329_+SINEAluAluY
CAediting_136456chr1_207788397_+SINEAluAluY
CAediting_136457chr1_207788403_+SINEAluAluY
CAediting_136458chr1_207788415_+SINEAluAluY
CAediting_136459chr1_207788428_+SINEAluAluY
CAediting_136460chr1_207788460_+SINEAluAluY
CAediting_136461chr1_207788470_+SINEAluAluY
CAediting_136462chr1_207788488_+SINEAluAluY
CAediting_136463chr1_207788498_+SINEAluAluY
CAediting_136464chr1_207789777_+SINEAluFLAM_C
CAediting_136465chr1_207789778_+SINEAluFLAM_C
CAediting_136466chr1_207789783_+SINEAluFLAM_C
CAediting_136467chr1_207789805_+SINEAluFLAM_C
CAediting_136468chr1_207792005_+SINEAluAluSz6
CAediting_136469chr1_207792019_+SINEAluAluSz6
CAediting_136470chr1_207792021_+SINEAluAluSz6
CAediting_136471chr1_207792025_+SINEAluAluSz6
CAediting_136472chr1_207792027_+SINEAluAluSz6
CAediting_136473chr1_207792028_+SINEAluAluSz6
CAediting_136474chr1_207792033_+SINEAluAluSz6
CAediting_136475chr1_207792090_+SINEAluAluSz6
CAediting_136476chr1_207792091_+SINEAluAluSz6
CAediting_136477chr1_207792098_+SINEAluAluSz6
CAediting_136478chr1_207792100_+SINEAluAluSz6
CAediting_136479chr1_207792129_+SINEAluAluSz6
CAediting_136480chr1_207792149_+SINEAluAluSz6
CAediting_136481chr1_207792155_+SINEAluAluSz6
CAediting_136482chr1_207792156_+SINEAluAluSz6
CAediting_136483chr1_207792165_+SINEAluAluSz6
CAediting_136484chr1_207792184_+SINEAluAluSz6
CAediting_136485chr1_207792196_+SINEAluAluSz6
CAediting_136486chr1_207792197_+SINEAluAluSz6
CAediting_136487chr1_207792204_+SINEAluAluSz6
CAediting_136488chr1_207792232_+SINEAluAluSz6
CAediting_136489chr1_207792239_+SINEAluAluSz6
CAediting_136490chr1_207792261_+SINEAluAluSz6
CAediting_136491chr1_207792266_+SINEAluAluSz6
CAediting_136492chr1_207792281_+SINEAluAluSz6
CAediting_136493chr1_207792295_+SINEAluAluSz6
CAediting_136494chr1_207792297_+SINEAluAluSz6
CAediting_136495chr1_207792298_+SINEAluAluSz6

Top

RNA A-to-I editing events in the alternative splicing sites for CD46

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000117335.17.CD46.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000117335.17.CD46.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for CD46

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
COAD.CAediting_136368.ENSG00000117335.CD46.png
Soverview
HNSC.CAediting_136369.ENSG00000117335.CD46.png
Soverview
HNSC.CAediting_136415.ENSG00000117335.CD46.png
Soverview
SKCM.CAediting_136338.ENSG00000117335.CD46.png
Soverview
SKCM.CAediting_136369.ENSG00000117335.CD46.png
Soverview
STAD.CAediting_136412.ENSG00000117335.CD46.png
Soverview
THYM.CAediting_136405.ENSG00000117335.CD46.png
Soverview

Top

Protein coding region RNA A-to-I editings for CD46

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for CD46

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000322875hsa-miR-6815-3p2077945782077945858mer-1a207794565207794585149.00-17.06
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000322918hsa-miR-6815-3p2077945782077945858mer-1a207794565207794585149.00-17.06
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000354848hsa-miR-6815-3p2077945782077945858mer-1a207794565207794585149.00-17.06
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000357714hsa-miR-6815-3p2077945782077945858mer-1a207794565207794585149.00-17.06
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000358170hsa-miR-6815-3p2077945782077945858mer-1a207794565207794585149.00-17.06
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000367041hsa-miR-6815-3p2077945782077945858mer-1a207794565207794585149.00-17.06
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000367047hsa-miR-6815-3p2077945782077945858mer-1a207794565207794585149.00-17.06
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000360212hsa-miR-6815-3p2077945782077945858mer-1a207794565207794585149.00-17.06

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000322875hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000322875hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000322875hsa-miR-3140-3p2077945782077945836mer207794563207794584140-15.08
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000322918hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000322918hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000322918hsa-miR-3140-3p2077945782077945836mer207794563207794584140-15.08
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000354848hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000354848hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000354848hsa-miR-3140-3p2077945782077945836mer207794563207794584140-15.08
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000357714hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000357714hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000357714hsa-miR-3140-3p2077945782077945836mer207794563207794584140-15.08
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000358170hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000358170hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000358170hsa-miR-3140-3p2077945782077945836mer207794563207794584140-15.08
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000367041hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000367041hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000367041hsa-miR-3140-3p2077945782077945836mer207794563207794584140-15.08
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000367047hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000367047hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000367047hsa-miR-3140-3p2077945782077945836mer207794563207794584140-15.08
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000360212hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000360212hsa-miR-31192077945782077945858mer-1a207794567207794585146-13.75
CAediting_136496chr1_207794580_+ENSG00000117335.17ENST00000360212hsa-miR-3140-3p2077945782077945836mer207794563207794584140-15.08

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000117335.17ENST00000322875hsa-miR-605-3p2077944822077944887mer-m8207794467207794489142-14.97
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000322875hsa-miR-4477b2077942472077942537mer-m8207794234207794254151-9.19
CAediting_748296chr10_51299626_+ENSG00000117335.17ENST00000322918hsa-miR-605-3p2077944822077944887mer-m8207794467207794489142-14.97
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000322918hsa-miR-4477b2077942472077942537mer-m8207794234207794254151-9.19
CAediting_748296chr10_51299626_+ENSG00000117335.17ENST00000354848hsa-miR-605-3p2077944822077944887mer-m8207794467207794489142-14.97
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000354848hsa-miR-4477b2077942472077942537mer-m8207794234207794254151-9.19
CAediting_748296chr10_51299626_+ENSG00000117335.17ENST00000357714hsa-miR-605-3p2077944822077944887mer-m8207794467207794489142-14.97
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000357714hsa-miR-4477b2077942472077942537mer-m8207794234207794254151-9.19
CAediting_748296chr10_51299626_+ENSG00000117335.17ENST00000358170hsa-miR-605-3p2077944822077944887mer-m8207794467207794489142-14.97
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000358170hsa-miR-4477b2077942472077942537mer-m8207794234207794254151-9.19
CAediting_748296chr10_51299626_+ENSG00000117335.17ENST00000367041hsa-miR-605-3p2077944822077944887mer-m8207794467207794489142-14.97
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000367041hsa-miR-4477b2077942472077942537mer-m8207794234207794254151-9.19
CAediting_748296chr10_51299626_+ENSG00000117335.17ENST00000367047hsa-miR-605-3p2077944822077944887mer-m8207794467207794489142-14.97
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000367047hsa-miR-4477b2077942472077942537mer-m8207794234207794254151-9.19
CAediting_748296chr10_51299626_+ENSG00000117335.17ENST00000360212hsa-miR-605-3p2077944822077944887mer-m8207794467207794489142-14.97
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000360212hsa-miR-4477b2077942472077942537mer-m8207794234207794254151-9.19
CAediting_1160181chr17_7017644_-ENSG00000117335.17ENST00000322875hsa-miR-195-3p2077948902077948967mer-m8207794877207794897145-12.54
CAediting_396018chr5_1062918_-ENSG00000117335.17ENST00000322875hsa-miR-46352077945302077945367mer-m8207794517207794537147-13.03
CAediting_524911chr7_5495852_-ENSG00000117335.17ENST00000322875hsa-miR-589-3p2077949752077949817mer-m8207794959207794982140-13.41
CAediting_1160181chr17_7017644_-ENSG00000117335.17ENST00000322918hsa-miR-195-3p2077948902077948967mer-m8207794877207794897145-12.54
CAediting_396018chr5_1062918_-ENSG00000117335.17ENST00000322918hsa-miR-46352077945302077945367mer-m8207794517207794537147-13.03
CAediting_524911chr7_5495852_-ENSG00000117335.17ENST00000322918hsa-miR-589-3p2077949752077949817mer-m8207794959207794982140-13.41
CAediting_1160181chr17_7017644_-ENSG00000117335.17ENST00000354848hsa-miR-195-3p2077948902077948967mer-m8207794877207794897145-12.54
CAediting_396018chr5_1062918_-ENSG00000117335.17ENST00000354848hsa-miR-46352077945302077945367mer-m8207794517207794537147-13.03
CAediting_524911chr7_5495852_-ENSG00000117335.17ENST00000354848hsa-miR-589-3p2077949752077949817mer-m8207794959207794982140-13.41
CAediting_1160181chr17_7017644_-ENSG00000117335.17ENST00000357714hsa-miR-195-3p2077948902077948967mer-m8207794877207794897145-12.54
CAediting_396018chr5_1062918_-ENSG00000117335.17ENST00000357714hsa-miR-46352077945302077945367mer-m8207794517207794537147-13.03
CAediting_524911chr7_5495852_-ENSG00000117335.17ENST00000357714hsa-miR-589-3p2077949752077949817mer-m8207794959207794982140-13.41
CAediting_1160181chr17_7017644_-ENSG00000117335.17ENST00000358170hsa-miR-195-3p2077948902077948967mer-m8207794877207794897145-12.54
CAediting_396018chr5_1062918_-ENSG00000117335.17ENST00000358170hsa-miR-46352077945302077945367mer-m8207794517207794537147-13.03
CAediting_524911chr7_5495852_-ENSG00000117335.17ENST00000358170hsa-miR-589-3p2077949752077949817mer-m8207794959207794982140-13.41
CAediting_1160181chr17_7017644_-ENSG00000117335.17ENST00000367041hsa-miR-195-3p2077948902077948967mer-m8207794877207794897145-12.54
CAediting_396018chr5_1062918_-ENSG00000117335.17ENST00000367041hsa-miR-46352077945302077945367mer-m8207794517207794537147-13.03
CAediting_524911chr7_5495852_-ENSG00000117335.17ENST00000367041hsa-miR-589-3p2077949752077949817mer-m8207794959207794982140-13.41
CAediting_1160181chr17_7017644_-ENSG00000117335.17ENST00000367047hsa-miR-195-3p2077948902077948967mer-m8207794877207794897145-12.54
CAediting_396018chr5_1062918_-ENSG00000117335.17ENST00000367047hsa-miR-46352077945302077945367mer-m8207794517207794537147-13.03
CAediting_524911chr7_5495852_-ENSG00000117335.17ENST00000367047hsa-miR-589-3p2077949752077949817mer-m8207794959207794982140-13.41
CAediting_1160181chr17_7017644_-ENSG00000117335.17ENST00000360212hsa-miR-195-3p2077948902077948967mer-m8207794877207794897145-12.54
CAediting_396018chr5_1062918_-ENSG00000117335.17ENST00000360212hsa-miR-46352077945302077945367mer-m8207794517207794537147-13.03
CAediting_524911chr7_5495852_-ENSG00000117335.17ENST00000360212hsa-miR-589-3p2077949752077949817mer-m8207794959207794982140-13.41

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_688080chr9_63819626_+ENSG00000117335.17ENST00000322875hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000322875hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688080chr9_63819626_+ENSG00000117335.17ENST00000322918hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000322918hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688080chr9_63819626_+ENSG00000117335.17ENST00000354848hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000354848hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688080chr9_63819626_+ENSG00000117335.17ENST00000357714hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000357714hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688080chr9_63819626_+ENSG00000117335.17ENST00000358170hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000358170hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688080chr9_63819626_+ENSG00000117335.17ENST00000367041hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000367041hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688080chr9_63819626_+ENSG00000117335.17ENST00000367047hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000367047hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688080chr9_63819626_+ENSG00000117335.17ENST00000360212hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32
CAediting_688081chr9_63819627_+ENSG00000117335.17ENST00000360212hsa-miR-4477b2077944552077944628mer-1a207794441207794462140-7.32

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CD46

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000322875.7protein_codingSoverviewSoverview
ENST00000322918.8protein_codingSoverviewSoverview
ENST00000354848.4protein_codingSoverviewSoverview
ENST00000357714.4protein_codingSoverviewSoverview
ENST00000358170.5protein_codingSoverviewSoverview
ENST00000360212.5protein_codingSoverviewSoverview
ENST00000367041.4protein_codingSoverviewSoverview
ENST00000367042.4protein_codingSoverviewSoverview
ENST00000367047.4protein_codingSoverviewSoverview
ENST00000469535.4processed_transcriptSoverviewSoverview
ENST00000488596.4processed_transcriptSoverviewSoverview
ENST00000490278.1retained_intronSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_136496ENST00000322875.7chr1_207794580_+-880.10-880.10-880.10
CAediting_136496ENST00000322918.8chr1_207794580_+-833.50-833.50-833.50
CAediting_136496ENST00000354848.4chr1_207794580_+-871.00-871.00-871.00
CAediting_136496ENST00000357714.4chr1_207794580_+-853.90-853.90-853.90
CAediting_136496ENST00000358170.5chr1_207794580_+-903.60-903.60-903.60
CAediting_136496ENST00000360212.5chr1_207794580_+-820.50-820.50-820.50
CAediting_136496ENST00000367041.4chr1_207794580_+-879.30-879.30-879.30
CAediting_136496ENST00000367042.4chr1_207794580_+-894.30-894.30-894.30
CAediting_136496ENST00000367047.4chr1_207794580_+-838.50-838.50-838.50
CAediting_136334ENST00000469535.4chr1_207768967_+-2298.30-2297.80-2324.10
CAediting_136335ENST00000469535.4chr1_207768977_+-2297.80-2297.80-2324.10
CAediting_136336ENST00000469535.4chr1_207768996_+-2297.40-2297.80-2324.10
CAediting_136337ENST00000469535.4chr1_207768998_+-2303.20-2297.80-2324.10
CAediting_136338ENST00000469535.4chr1_207769004_+-2297.90-2297.80-2324.10
CAediting_136339ENST00000469535.4chr1_207769005_+-2297.60-2297.80-2324.10
CAediting_136340ENST00000469535.4chr1_207769007_+-2300.20-2297.80-2324.10
CAediting_136341ENST00000469535.4chr1_207769010_+-2297.10-2297.80-2324.10
CAediting_136342ENST00000469535.4chr1_207769012_+-2300.40-2297.80-2324.10
CAediting_136343ENST00000469535.4chr1_207769013_+-2298.30-2297.80-2324.10
CAediting_136344ENST00000469535.4chr1_207769021_+-2296.90-2297.80-2324.10
CAediting_136345ENST00000469535.4chr1_207769040_+-2297.40-2297.80-2324.10
CAediting_136346ENST00000469535.4chr1_207769043_+-2296.90-2297.80-2324.10
CAediting_136347ENST00000469535.4chr1_207769048_+-2297.10-2297.80-2324.10
CAediting_136348ENST00000469535.4chr1_207769050_+-2304.70-2297.80-2324.10
CAediting_136349ENST00000469535.4chr1_207769051_+-2297.80-2297.80-2324.10
CAediting_136350ENST00000469535.4chr1_207769056_+-2303.80-2297.80-2324.10
CAediting_136351ENST00000469535.4chr1_207769057_+-2297.70-2297.80-2324.10
CAediting_136352ENST00000469535.4chr1_207769080_+-2297.30-2297.80-2324.10
CAediting_136353ENST00000469535.4chr1_207769081_+-2297.90-2297.80-2324.10
CAediting_136354ENST00000469535.4chr1_207769082_+-2297.80-2297.80-2324.10
CAediting_136355ENST00000469535.4chr1_207769087_+-2303.60-2297.80-2324.10
CAediting_136356ENST00000469535.4chr1_207769093_+-2297.80-2297.80-2324.10
CAediting_136357ENST00000469535.4chr1_207769096_+-2297.90-2297.80-2324.10
CAediting_136358ENST00000469535.4chr1_207769097_+-2297.90-2297.80-2324.10
CAediting_136359ENST00000469535.4chr1_207769098_+-2297.90-2297.80-2324.10
CAediting_136360ENST00000469535.4chr1_207769099_+-2297.90-2297.80-2324.10
CAediting_136361ENST00000469535.4chr1_207769100_+-2297.80-2297.80-2324.10
CAediting_136362ENST00000469535.4chr1_207769102_+-2297.80-2297.80-2324.10
CAediting_136363ENST00000469535.4chr1_207769104_+-2297.50-2297.80-2324.10
CAediting_136364ENST00000469535.4chr1_207769105_+-2297.90-2297.80-2324.10
CAediting_136365ENST00000469535.4chr1_207769106_+-2297.90-2297.80-2324.10
CAediting_136366ENST00000469535.4chr1_207769107_+-2297.90-2297.80-2324.10
CAediting_136367ENST00000469535.4chr1_207769108_+-2297.80-2297.80-2324.10
CAediting_136368ENST00000469535.4chr1_207769111_+-2297.50-2297.80-2324.10
CAediting_136369ENST00000469535.4chr1_207769131_+-2302.60-2297.80-2324.10
CAediting_136370ENST00000469535.4chr1_207769137_+-2297.90-2297.80-2324.10
CAediting_136371ENST00000469535.4chr1_207769138_+-2297.80-2297.80-2324.10
CAediting_136372ENST00000469535.4chr1_207769143_+-2297.10-2297.80-2324.10
CAediting_136373ENST00000469535.4chr1_207769154_+-2296.90-2297.80-2324.10
CAediting_136374ENST00000469535.4chr1_207769160_+-2300.40-2297.80-2324.10
CAediting_136375ENST00000469535.4chr1_207769167_+-2296.90-2297.80-2324.10
CAediting_136376ENST00000469535.4chr1_207769170_+-2294.80-2297.80-2324.10
CAediting_136377ENST00000469535.4chr1_207769178_+-2297.30-2297.80-2324.10
CAediting_136378ENST00000469535.4chr1_207769179_+-2297.80-2297.80-2324.10
CAediting_136379ENST00000469535.4chr1_207769190_+-2304.00-2297.80-2324.10
CAediting_136380ENST00000469535.4chr1_207769192_+-2296.90-2297.80-2324.10
CAediting_136381ENST00000469535.4chr1_207769199_+-2297.10-2297.80-2324.10
CAediting_136382ENST00000469535.4chr1_207769203_+-2296.90-2297.80-2324.10
CAediting_136383ENST00000469535.4chr1_207769207_+-2297.50-2297.80-2324.10
CAediting_136384ENST00000469535.4chr1_207769208_+-2297.50-2297.80-2324.10
CAediting_136385ENST00000469535.4chr1_207769213_+-2303.20-2297.80-2324.10
CAediting_136386ENST00000469535.4chr1_207769218_+-2297.40-2297.80-2324.10
CAediting_136387ENST00000469535.4chr1_207769223_+-2297.40-2297.80-2324.10
CAediting_136388ENST00000469535.4chr1_207769240_+-2297.10-2297.80-2324.10
CAediting_136389ENST00000469535.4chr1_207769242_+-2296.90-2297.80-2324.10
CAediting_136390ENST00000469535.4chr1_207769260_+-2297.90-2297.80-2324.10
CAediting_136391ENST00000469535.4chr1_207769265_+-2297.90-2297.80-2324.10
CAediting_136392ENST00000469535.4chr1_207769757_+-2297.50-2297.80-2324.10
CAediting_136393ENST00000469535.4chr1_207769782_+-2296.90-2297.80-2324.10
CAediting_136394ENST00000469535.4chr1_207769784_+-2297.20-2297.80-2324.10
CAediting_136395ENST00000469535.4chr1_207769786_+-2297.10-2297.80-2324.10
CAediting_136396ENST00000469535.4chr1_207769788_+-2296.90-2297.80-2324.10
CAediting_136397ENST00000469535.4chr1_207769802_+-2297.40-2297.80-2324.10
CAediting_136398ENST00000469535.4chr1_207769806_+-2297.10-2297.80-2324.10
CAediting_136399ENST00000469535.4chr1_207769818_+-2297.10-2297.80-2324.10
CAediting_136400ENST00000469535.4chr1_207769837_+-2297.40-2297.80-2324.10
CAediting_136401ENST00000469535.4chr1_207769842_+-2297.50-2297.80-2324.10
CAediting_136402ENST00000469535.4chr1_207769843_+-2297.80-2297.80-2324.10
CAediting_136403ENST00000469535.4chr1_207769862_+-2297.50-2297.80-2324.10
CAediting_136404ENST00000469535.4chr1_207769863_+-2297.50-2297.80-2324.10
CAediting_136405ENST00000469535.4chr1_207769883_+-2304.00-2297.80-2324.10
CAediting_136406ENST00000469535.4chr1_207769885_+-2300.60-2297.80-2324.10
CAediting_136407ENST00000469535.4chr1_207769891_+-2303.80-2297.80-2324.10
CAediting_136408ENST00000469535.4chr1_207769895_+-2296.50-2297.80-2324.10
CAediting_136409ENST00000469535.4chr1_207769902_+-2298.10-2297.80-2324.10
CAediting_136410ENST00000469535.4chr1_207769905_+-2297.80-2297.80-2324.10
CAediting_136411ENST00000469535.4chr1_207769907_+-2297.00-2297.80-2324.10
CAediting_136412ENST00000469535.4chr1_207769911_+-2302.60-2297.80-2324.10
CAediting_136413ENST00000469535.4chr1_207769918_+-2300.50-2297.80-2324.10
CAediting_136414ENST00000469535.4chr1_207769931_+-2297.80-2297.80-2324.10
CAediting_136415ENST00000469535.4chr1_207769940_+-2297.80-2297.80-2324.10
CAediting_136416ENST00000469535.4chr1_207769949_+-2297.50-2297.80-2324.10
CAediting_136417ENST00000469535.4chr1_207769987_+-2297.30-2297.80-2324.10
CAediting_136418ENST00000469535.4chr1_207769988_+-2297.80-2297.80-2324.10
CAediting_136419ENST00000469535.4chr1_207769995_+-2297.20-2297.80-2324.10
CAediting_136420ENST00000469535.4chr1_207770000_+-2297.80-2297.80-2324.10
CAediting_136421ENST00000469535.4chr1_207770001_+-2297.80-2297.80-2324.10
CAediting_136422ENST00000469535.4chr1_207770005_+-2297.20-2297.80-2324.10
CAediting_136423ENST00000469535.4chr1_207770009_+-2297.40-2297.80-2324.10
CAediting_136424ENST00000469535.4chr1_207770037_+-2297.90-2297.80-2324.10
CAediting_136425ENST00000469535.4chr1_207770040_+-2297.80-2297.80-2324.10
CAediting_136426ENST00000469535.4chr1_207770042_+-2297.10-2297.80-2324.10
CAediting_136427ENST00000469535.4chr1_207770056_+-2300.50-2297.80-2324.10
CAediting_136428ENST00000469535.4chr1_207770109_+-2304.10-2297.80-2324.10
CAediting_136496ENST00000469535.4chr1_207794580_+-2297.80-2297.80-2324.10
CAediting_136426ENST00000488596.4chr1_207770042_+-228.80-228.90-233.00
CAediting_136427ENST00000488596.4chr1_207770056_+-228.20-228.90-233.00
CAediting_136428ENST00000488596.4chr1_207770109_+-233.30-228.90-233.00
CAediting_136427ENST00000490278.1chr1_207770056_+-168.60-168.60-171.30
CAediting_136428ENST00000490278.1chr1_207770109_+-171.60-168.60-171.30

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Relation with ADAR for CD46

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BLCACAediting_136337chr1_207768998_+0.005898676578087820.207943924084422....
LGGCAediting_136337chr1_207768998_+0.03097315412148450.151856313824561....
BRCACAediting_136337chr1_207768998_+3.60135847185978e-090.218118395074259....
CESCCAediting_136337chr1_207768998_+0.0003095786933271240.286875702165397....
LUADCAediting_136337chr1_207768998_+5.16399754385088e-050.221911643677944....
THCACAediting_136337chr1_207768998_+0.0008232067335515180.231842363556921....
KIRPCAediting_136337chr1_207768998_+0.02823105528501780.260497378097928....
SKCMCAediting_136338chr1_207769004_+..0.02088698669149220.308087911685981..
BRCACAediting_136350chr1_207769056_+..0.02940839438647050.262377609632246..
BRCACAediting_136355chr1_207769087_+..0.02041562843470670.207209308310326..
PRADCAediting_136355chr1_207769087_+..0.04961283976864920.252507227510278..
BLCACAediting_136368chr1_207769111_+..0.02256529429154280.225684100772558..
LGGCAediting_136368chr1_207769111_+..0.03583297546484820.249557696785171..
BRCACAediting_136368chr1_207769111_+0.03258004125736750.0911489999930588....
LUADCAediting_136369chr1_207769131_+0.001910577525458890.177622387628758....
COADCAediting_136369chr1_207769131_+0.01075082955194340.186637921407424....
SKCMCAediting_136369chr1_207769131_+0.0005704901472018620.347019659352575....
BLCACAediting_136370chr1_207769137_+0.02066977683241590.2155892892759....
CESCCAediting_136370chr1_207769137_+0.03536469791786080.205606639538116....
LUADCAediting_136371chr1_207769138_+0.01095737360467460.175659023733912....
THCACAediting_136371chr1_207769138_+0.01389425275129650.224047488020674....
ESCACAediting_136384chr1_207769208_+..0.000187411259925990.464139570717167..
BLCACAediting_136401chr1_207769842_+0.003885325923813470.247845038807147....
BLCACAediting_136402chr1_207769843_+0.02029761563910090.204165076108883....
LUADCAediting_136402chr1_207769843_+0.037232384408950.145968467426802....
BLCACAediting_136405chr1_207769883_+0.01898459155877580.1552666684706....
CESCCAediting_136405chr1_207769883_+....0.02063865875844090.159266507913891
LUSCCAediting_136405chr1_207769883_+..0.03557509475084950.132210072528243..
THCACAediting_136405chr1_207769883_+..0.01208348586422460.149011686356535..
ESCACAediting_136405chr1_207769883_+..0.01553749677291150.239038320773532..
SKCMCAediting_136405chr1_207769883_+..0.0008316867516155670.276434164511375..
TGCTCAediting_136405chr1_207769883_+..0.03142005160478020.263173027392543..
BLCACAediting_136407chr1_207769891_+..0.04015780908588990.174930044278814..
BLCACAediting_136410chr1_207769905_+..0.01288170677035590.231289061717212..
LUADCAediting_136412chr1_207769911_+0.03807839013119010.187261538461313....
BLCACAediting_136415chr1_207769940_+..0.02321108360190290.21934037628804..
LUADCAediting_136415chr1_207769940_+0.03242444954438280.155682236631595....
BLCACAediting_136425chr1_207770040_+..0.01957983310509490.278473346108519..
LGGCAediting_136425chr1_207770040_+..0.01889481150276920.173885933767609..
BRCACAediting_136425chr1_207770040_+8.62928842920447e-050.186908600978316....
CESCCAediting_136425chr1_207770040_+0.007156270841217690.355588533342794....
LUADCAediting_136425chr1_207770040_+0.009050430357726090.200228837651909....
LUSCCAediting_136425chr1_207770040_+0.01431049327688880.274632426662011....
STADCAediting_136425chr1_207770040_+..6.26575805505394e-060.501270368913947..
ESCACAediting_136425chr1_207770040_+..0.002057743741297060.406759764398668..
SKCMCAediting_136425chr1_207770040_+..0.006666460484788660.3191781549689210.01599369139615760.285004794993037

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Relation with cancer stages for CD46

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BLCApathologic_stageCAediting_136337chr1_207768998_+0.000323435949796370.271002050904874
BLCApathologic_stageCAediting_136369chr1_207769131_+0.005937194600722540.213333439060016
BLCApathologic_stageCAediting_136370chr1_207769137_+0.01033913895184150.239303498679133
BLCApathologic_stageCAediting_136401chr1_207769842_+0.01320201164780340.215218910518746
BLCApathologic_stageCAediting_136402chr1_207769843_+0.02976886167867220.192928152885339
BLCApathologic_stageCAediting_136405chr1_207769883_+0.001345530082661320.212011782447888
BLCApathologic_stageCAediting_136410chr1_207769905_+0.01479409824842010.228783480268501
BLCApathologic_stageCAediting_136411chr1_207769907_+0.03341637097983370.219640140128794
BRCApathologic_stageCAediting_136401chr1_207769842_+0.02447831513490940.110687653119729
BRCApathologic_stageCAediting_136402chr1_207769843_+0.008931702865492050.13449596430139
CESCclinical_stageCAediting_136337chr1_207768998_+0.00144909181289126-0.257776314705772
CESCclinical_stageCAediting_136369chr1_207769131_+0.00895178608812726-0.212753844982948
CESCclinical_stageCAediting_136402chr1_207769843_+0.0494173118429127-0.190455569028261
CESCclinical_stageCAediting_136405chr1_207769883_+0.00976469342021754-0.179232646796661
CESCclinical_stageCAediting_136412chr1_207769911_+0.0106476293010234-0.338782811509412
COADpathologic_stageCAediting_136338chr1_207769004_+0.0373381736119644-0.221083038810161
ESCApathologic_stageCAediting_136337chr1_207768998_+0.009273257825535510.257709274914384
HNSCpathologic_stageCAediting_136369chr1_207769131_+0.004117563311746740.356635360648566
KIRCpathologic_stageCAediting_136337chr1_207768998_+0.000525778085438950.262411259063769
KIRCpathologic_stageCAediting_136405chr1_207769883_+0.002957961822457120.208623386894151
KIRCpathologic_stageCAediting_136407chr1_207769891_+0.04367049122385510.19273071834759
LUADpathologic_stageCAediting_136337chr1_207768998_+0.01865431365792920.131036209237554
LUADpathologic_stageCAediting_136404chr1_207769863_+0.02297778394406870.324365089744901
LUADpathologic_stageCAediting_136411chr1_207769907_+0.0341604824840799-0.156258097767444
LUSCpathologic_stageCAediting_136405chr1_207769883_+2.34177842391988e-050.263036487682714
SKCMpathologic_stageCAediting_136371chr1_207769138_+0.026922081731769-0.306853846916868
STADpathologic_stageCAediting_136369chr1_207769131_+0.02739356023302630.221746055168488
STADpathologic_stageCAediting_136405chr1_207769883_+0.032491096504230.174709203931471
STADpathologic_stageCAediting_136439chr1_207787200_+0.04139874803545770.18420086140479
THCApathologic_stageCAediting_136337chr1_207768998_+0.005062691630508020.195553755298302
THCApathologic_stageCAediting_136401chr1_207769842_+0.0136630039622968-0.214178295688515
THCApathologic_stageCAediting_136405chr1_207769883_+0.009518128888639590.154436449870096
UCECclinical_stageCAediting_136402chr1_207769843_+0.0237472189369621-0.280258137450176
UCECclinical_stageCAediting_136414chr1_207769931_+0.0217698849960118-0.323863443501252

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Relation with survival for CD46

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
LGGCAediting_136370chr1_207769137_+0.002621396559663420.045254556.8884
KIRCCAediting_136407chr1_207769891_+0.00861884538052260.000672895155.164
OVCAediting_136402chr1_207769843_+0.01999135952487230.02002645.33456
PAADCAediting_136371chr1_207769138_+0.0004086940507325170.03736320.000920129

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RelatedDrugs for CD46

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CD46

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
CD46C2752040HEMOLYTIC UREMIC SYNDROME, ATYPICAL, SUSCEPTIBILITY TO, 26GENOMICS_ENGLAND;UNIPROT
CD46C2931788Atypical Hemolytic Uremic Syndrome2CTD_human;GENOMICS_ENGLAND
CD46C0019061Hemolytic-Uremic Syndrome1GENOMICS_ENGLAND
CD46C0025007Measles1CTD_human
CD46C0162739HELLP Syndrome1ORPHANET
CD46C0272242Complement deficiency disease1GENOMICS_ENGLAND
CD46C3658266Prostatic Cancer, Castration-Resistant1CTD_human
CD46C3658267Prostatic Neoplasms, Castration-Resistant1CTD_human
CD46C4087273C3 glomerulopathy1GENOMICS_ENGLAND