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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: MCM5 (CAeditome ID:4174) |
Gene summary for MCM5 |
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Gene information | Gene symbol | MCM5 | Gene ID | 4174 |
Gene name | minichromosome maintenance complex component 5 | |
Synonyms | CDC46|MGORS8|P1-CDC46 | |
Cytomap | 22q12.3 | |
Type of gene | protein-coding | |
Description | DNA replication licensing factor MCM5CDC46 homologMCM5 minichromosome maintenance deficient 5, cell division cycle 46minichromosome maintenance deficient 5 (cell division cycle 46) | |
Modification date | 20210518 | |
UniProtAcc | P33992 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
MCM5 | GO:0005654 | DNA replication licensing factor MCM5 | 0000052 |
MCM5 | GO:0042555 | DNA replication licensing factor MCM5 | 17296731 |
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RNA A-to-I events for MCM5 |
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CAediting_1477625(35402165, +), CAediting_1477626(35402194, +), CAediting_1477627(35402203, +), CAediting_1477628(35402205, +), CAediting_1477629(35402222, +), CAediting_1477630(35402228, +), CAediting_1477631(35402744, +), CAediting_1477632(35402806, +), CAediting_1477633(35405436, +), CAediting_1477634(35405441, +), CAediting_1477635(35405641, +), CAediting_1477636(35405800, +), CAediting_1477637(35405801, +), CAediting_1477638(35405828, +), CAediting_1477639(35405955, +), CAediting_1477640(35408982, +), CAediting_1477641(35409027, +), CAediting_1477642(35409043, +), CAediting_1477643(35409092, +), CAediting_1477644(35409104, +), CAediting_1477645(35409170, +), CAediting_1477646(35409294, +), CAediting_1477647(35409300, +), CAediting_1477648(35409318, +), CAediting_1477649(35409319, +), CAediting_1477650(35409345, +), CAediting_1477651(35409359, +), CAediting_1477652(35409372, +), CAediting_1477653(35409375, +), CAediting_1477654(35409447, +), CAediting_1477655(35409451, +), CAediting_1477656(35409453, +), CAediting_1477657(35409454, +), CAediting_1477658(35409499, +), CAediting_1477659(35409501, +), CAediting_1477660(35409519, +), CAediting_1477661(35409529, +), CAediting_1477662(35409531, +), |
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RNA editing positional annotations for MCM5 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_1477625 | chr22_35402165_+ | ncRNA_intronic |
CAediting_1477626 | chr22_35402194_+ | ncRNA_intronic |
CAediting_1477627 | chr22_35402203_+ | ncRNA_intronic |
CAediting_1477628 | chr22_35402205_+ | ncRNA_intronic |
CAediting_1477629 | chr22_35402222_+ | ncRNA_intronic |
CAediting_1477630 | chr22_35402228_+ | ncRNA_intronic |
CAediting_1477631 | chr22_35402744_+ | ncRNA_intronic |
CAediting_1477632 | chr22_35402806_+ | ncRNA_intronic |
CAediting_1477633 | chr22_35405436_+ | ncRNA_intronic |
CAediting_1477634 | chr22_35405441_+ | ncRNA_intronic |
CAediting_1477635 | chr22_35405641_+ | ncRNA_intronic |
CAediting_1477636 | chr22_35405800_+ | ncRNA_intronic |
CAediting_1477637 | chr22_35405801_+ | ncRNA_intronic |
CAediting_1477638 | chr22_35405828_+ | ncRNA_intronic |
CAediting_1477639 | chr22_35405955_+ | ncRNA_intronic |
CAediting_1477640 | chr22_35408982_+ | ncRNA_intronic |
CAediting_1477641 | chr22_35409027_+ | ncRNA_intronic |
CAediting_1477642 | chr22_35409043_+ | ncRNA_intronic |
CAediting_1477643 | chr22_35409092_+ | ncRNA_intronic |
CAediting_1477644 | chr22_35409104_+ | ncRNA_intronic |
CAediting_1477645 | chr22_35409170_+ | ncRNA_intronic |
CAediting_1477646 | chr22_35409294_+ | ncRNA_intronic |
CAediting_1477647 | chr22_35409300_+ | ncRNA_intronic |
CAediting_1477648 | chr22_35409318_+ | ncRNA_intronic |
CAediting_1477649 | chr22_35409319_+ | ncRNA_intronic |
CAediting_1477650 | chr22_35409345_+ | ncRNA_intronic |
CAediting_1477651 | chr22_35409359_+ | ncRNA_intronic |
CAediting_1477652 | chr22_35409372_+ | ncRNA_intronic |
CAediting_1477653 | chr22_35409375_+ | ncRNA_intronic |
CAediting_1477654 | chr22_35409447_+ | ncRNA_intronic |
CAediting_1477655 | chr22_35409451_+ | ncRNA_intronic |
CAediting_1477656 | chr22_35409453_+ | ncRNA_intronic |
CAediting_1477657 | chr22_35409454_+ | ncRNA_intronic |
CAediting_1477658 | chr22_35409499_+ | ncRNA_exonic |
CAediting_1477659 | chr22_35409501_+ | ncRNA_exonic |
CAediting_1477660 | chr22_35409519_+ | ncRNA_exonic |
CAediting_1477661 | chr22_35409529_+ | ncRNA_exonic |
CAediting_1477662 | chr22_35409531_+ | ncRNA_exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1477625 | chr22_35402165_+ | SINE | Alu | AluJb |
CAediting_1477626 | chr22_35402194_+ | SINE | Alu | AluJb |
CAediting_1477627 | chr22_35402203_+ | SINE | Alu | AluJb |
CAediting_1477628 | chr22_35402205_+ | SINE | Alu | AluJb |
CAediting_1477629 | chr22_35402222_+ | SINE | Alu | AluJb |
CAediting_1477630 | chr22_35402228_+ | SINE | Alu | AluJb |
CAediting_1477631 | chr22_35402744_+ | SINE | Alu | AluSz6 |
CAediting_1477632 | chr22_35402806_+ | SINE | Alu | AluSz6 |
CAediting_1477633 | chr22_35405436_+ | SINE | Alu | AluSz |
CAediting_1477634 | chr22_35405441_+ | SINE | Alu | AluSz |
CAediting_1477635 | chr22_35405641_+ | SINE | Alu | AluSz |
CAediting_1477636 | chr22_35405800_+ | SINE | Alu | AluSx1 |
CAediting_1477637 | chr22_35405801_+ | SINE | Alu | AluSx1 |
CAediting_1477638 | chr22_35405828_+ | SINE | Alu | AluSx1 |
CAediting_1477639 | chr22_35405955_+ | SINE | Alu | AluSx1 |
CAediting_1477640 | chr22_35408982_+ | SINE | Alu | AluY |
CAediting_1477641 | chr22_35409027_+ | SINE | Alu | AluY |
CAediting_1477642 | chr22_35409043_+ | SINE | Alu | AluY |
CAediting_1477643 | chr22_35409092_+ | SINE | Alu | AluY |
CAediting_1477644 | chr22_35409104_+ | SINE | Alu | AluY |
CAediting_1477645 | chr22_35409170_+ | SINE | Alu | AluY |
CAediting_1477647 | chr22_35409300_+ | SINE | Alu | AluJr |
CAediting_1477648 | chr22_35409318_+ | SINE | Alu | AluJr |
CAediting_1477649 | chr22_35409319_+ | SINE | Alu | AluJr |
CAediting_1477650 | chr22_35409345_+ | SINE | Alu | AluJr |
CAediting_1477651 | chr22_35409359_+ | SINE | Alu | AluJr |
CAediting_1477652 | chr22_35409372_+ | SINE | Alu | AluJr |
CAediting_1477653 | chr22_35409375_+ | SINE | Alu | AluJr |
CAediting_1477654 | chr22_35409447_+ | SINE | Alu | AluJr |
CAediting_1477655 | chr22_35409451_+ | SINE | Alu | AluJr |
CAediting_1477656 | chr22_35409453_+ | SINE | Alu | AluJr |
CAediting_1477657 | chr22_35409454_+ | SINE | Alu | AluJr |
CAediting_1477658 | chr22_35409499_+ | SINE | Alu | AluJr |
CAediting_1477659 | chr22_35409501_+ | SINE | Alu | AluJr |
CAediting_1477660 | chr22_35409519_+ | SINE | Alu | AluJr |
CAediting_1477661 | chr22_35409529_+ | SINE | Alu | AluJr |
CAediting_1477662 | chr22_35409531_+ | SINE | Alu | AluJr |
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RNA A-to-I editing events in the alternative splicing sites for MCM5 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for MCM5 |
![]() * The grey color means N/A. |
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LAML.CAediting_1477629.ENSG00000100297.MCM5.png ![]() |
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Protein coding region RNA A-to-I editings for MCM5 |
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The effects of the RNA editing to the miRNA binding sites for MCM5 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1524209 | chrX_134546392_- | ENSG00000100297.14 | ENST00000382011 | hsa-miR-503-5p | 35424415 | 35424420 | 6mer | 35424400 | 35424421 | 151 | -29.1 |
CAediting_1524209 | chrX_134546392_- | ENSG00000100297.14 | ENST00000382011 | hsa-miR-503-5p | 35424307 | 35424313 | 7mer-m8 | 35424292 | 35424314 | 151 | -20.41 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for MCM5 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for MCM5 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for MCM5 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for MCM5 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for MCM5 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for MCM5 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
MCM5 | C0001956 | Alcohol Use Disorder | 1 | PSYGENET |
MCM5 | C4479655 | MEIER-GORLIN SYNDROME 8 | 1 | GENOMICS_ENGLAND;UNIPROT |