CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ARSA (CAeditome ID:410)

Gene summary for ARSA

check button Gene summary
Gene informationGene symbol

ARSA

Gene ID

410

Gene namearylsulfatase A
SynonymsASA|MLD
Cytomap

22q13.33

Type of geneprotein-coding
Descriptionarylsulfatase Acerebroside-sulfataseepididymis secretory sperm binding protein
Modification date20210518
UniProtAcc

P15289

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
ARSA

GO:0005509

Arylsulfatase A

12888274

ARSA

GO:0008484

Arylsulfatase A

15962010


Top

RNA A-to-I events for ARSA

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000100299.16
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1496821(50623441, -), CAediting_1496822(50623443, -), CAediting_1496823(50623444, -), CAediting_1496824(50623467, -), CAediting_1496825(50623469, -), CAediting_1496826(50623475, -), CAediting_1496827(50623487, -), CAediting_1496828(50623492, -), CAediting_1496829(50623500, -), CAediting_1496830(50623506, -), CAediting_1496831(50623512, -), CAediting_1496832(50623516, -), CAediting_1496833(50623529, -), CAediting_1496834(50623532, -), CAediting_1496835(50623537, -), CAediting_1496836(50623542, -), CAediting_1496837(50623545, -), CAediting_1496838(50623546, -), CAediting_1496839(50623548, -), CAediting_1496840(50623561, -), CAediting_1496841(50623568, -), CAediting_1496842(50623572, -), CAediting_1496843(50623584, -), CAediting_1496844(50623593, -), CAediting_1496845(50623597, -), CAediting_1496846(50623615, -), CAediting_1496847(50623616, -), CAediting_1496848(50623624, -), CAediting_1496849(50623629, -), CAediting_1496850(50623632, -), CAediting_1496851(50623633, -), CAediting_1496852(50623640, -), CAediting_1496853(50623642, -), CAediting_1496854(50623654, -), CAediting_1496855(50623655, -), CAediting_1496856(50623656, -), CAediting_1496857(50623664, -), CAediting_1496858(50623682, -), CAediting_1496859(50623687, -), CAediting_1496860(50623694, -), CAediting_1496861(50623695, -), CAediting_1496862(50623696, -), CAediting_1496863(50623707, -), CAediting_1496864(50623719, -), CAediting_1496865(50623727, -), CAediting_1496866(50623731, -), CAediting_1496867(50623733, -), CAediting_1496868(50623736, -), CAediting_1496869(50623740, -), CAediting_1496870(50623750, -), CAediting_1496871(50623751, -), CAediting_1496872(50623755, -), CAediting_1496873(50623761, -), CAediting_1496874(50623775, -), CAediting_1496875(50623780, -), CAediting_1496876(50623781, -), CAediting_1496877(50623787, -), CAediting_1496878(50623790, -), CAediting_1496879(50623812, -), CAediting_1496880(50623816, -), CAediting_1496881(50623836, -), CAediting_1496882(50623837, -), CAediting_1496883(50623842, -), CAediting_1496884(50623852, -), CAediting_1496885(50623855, -), CAediting_1496886(50623861, -), CAediting_1496887(50623891, -), CAediting_1496888(50623951, -), CAediting_1496889(50623952, -), CAediting_1496890(50623953, -), CAediting_1496891(50623959, -), CAediting_1496892(50623966, -), CAediting_1496893(50623970, -), CAediting_1496894(50623975, -), CAediting_1496895(50623984, -), CAediting_1496896(50623989, -), CAediting_1496897(50623993, -), CAediting_1496898(50624002, -), CAediting_1496899(50624012, -), CAediting_1496900(50624014, -), CAediting_1496901(50624019, -), CAediting_1496902(50624025, -), CAediting_1496903(50624036, -), CAediting_1496904(50624054, -), CAediting_1496905(50624060, -), CAediting_1496906(50624069, -), CAediting_1496907(50624076, -), CAediting_1496908(50624077, -), CAediting_1496909(50624078, -), CAediting_1496910(50624079, -), CAediting_1496911(50624080, -), CAediting_1496912(50624081, -), CAediting_1496913(50624083, -), CAediting_1496914(50624085, -), CAediting_1496915(50624086, -), CAediting_1496916(50624087, -), CAediting_1496917(50624098, -), CAediting_1496918(50624099, -), CAediting_1496919(50624100, -), CAediting_1496920(50624101, -), CAediting_1496921(50624106, -), CAediting_1496922(50624107, -), CAediting_1496923(50624110, -), CAediting_1496924(50624119, -), CAediting_1496925(50624137, -), CAediting_1496926(50624139, -), CAediting_1496927(50624144, -), CAediting_1496928(50624148, -), CAediting_1496929(50624161, -), CAediting_1496930(50624168, -), CAediting_1496931(50624169, -), CAediting_1496932(50624174, -), CAediting_1496933(50624177, -), CAediting_1496934(50624178, -), CAediting_1496935(50624187, -), CAediting_1496936(50624193, -), CAediting_1496937(50624200, -), CAediting_1496938(50624204, -), CAediting_1496939(50624209, -), CAediting_1496940(50624210, -), CAediting_1496941(50624232, -), CAediting_1496942(50624236, -), CAediting_1496943(50624250, -), CAediting_1496944(50624284, -), CAediting_1496945(50624287, -), CAediting_1496946(50624289, -), CAediting_1496947(50624295, -), CAediting_1496948(50624303, -), CAediting_1496949(50624308, -), CAediting_1496950(50624326, -), CAediting_1496951(50624330, -), CAediting_1496952(50624338, -), CAediting_1496953(50624343, -), CAediting_1496954(50624344, -), CAediting_1496955(50624352, -), CAediting_1496956(50624379, -),

Top

RNA editing positional annotations for ARSA using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1496821chr22_50623441_-intronic
CAediting_1496822chr22_50623443_-intronic
CAediting_1496823chr22_50623444_-intronic
CAediting_1496824chr22_50623467_-intronic
CAediting_1496825chr22_50623469_-intronic
CAediting_1496826chr22_50623475_-intronic
CAediting_1496827chr22_50623487_-intronic
CAediting_1496828chr22_50623492_-intronic
CAediting_1496829chr22_50623500_-intronic
CAediting_1496830chr22_50623506_-intronic
CAediting_1496831chr22_50623512_-intronic
CAediting_1496832chr22_50623516_-intronic
CAediting_1496833chr22_50623529_-intronic
CAediting_1496834chr22_50623532_-intronic
CAediting_1496835chr22_50623537_-intronic
CAediting_1496836chr22_50623542_-intronic
CAediting_1496837chr22_50623545_-intronic
CAediting_1496838chr22_50623546_-intronic
CAediting_1496839chr22_50623548_-intronic
CAediting_1496840chr22_50623561_-intronic
CAediting_1496841chr22_50623568_-intronic
CAediting_1496842chr22_50623572_-intronic
CAediting_1496843chr22_50623584_-intronic
CAediting_1496844chr22_50623593_-intronic
CAediting_1496845chr22_50623597_-intronic
CAediting_1496846chr22_50623615_-intronic
CAediting_1496847chr22_50623616_-intronic
CAediting_1496848chr22_50623624_-intronic
CAediting_1496849chr22_50623629_-intronic
CAediting_1496850chr22_50623632_-intronic
CAediting_1496851chr22_50623633_-intronic
CAediting_1496852chr22_50623640_-intronic
CAediting_1496853chr22_50623642_-intronic
CAediting_1496854chr22_50623654_-intronic
CAediting_1496855chr22_50623655_-intronic
CAediting_1496856chr22_50623656_-intronic
CAediting_1496857chr22_50623664_-intronic
CAediting_1496858chr22_50623682_-intronic
CAediting_1496859chr22_50623687_-intronic
CAediting_1496860chr22_50623694_-intronic
CAediting_1496861chr22_50623695_-intronic
CAediting_1496862chr22_50623696_-intronic
CAediting_1496863chr22_50623707_-intronic
CAediting_1496864chr22_50623719_-intronic
CAediting_1496865chr22_50623727_-intronic
CAediting_1496866chr22_50623731_-intronic
CAediting_1496867chr22_50623733_-intronic
CAediting_1496868chr22_50623736_-intronic
CAediting_1496869chr22_50623740_-intronic
CAediting_1496870chr22_50623750_-intronic
CAediting_1496871chr22_50623751_-intronic
CAediting_1496872chr22_50623755_-intronic
CAediting_1496873chr22_50623761_-intronic
CAediting_1496874chr22_50623775_-UTR3
CAediting_1496875chr22_50623780_-UTR3
CAediting_1496876chr22_50623781_-UTR3
CAediting_1496877chr22_50623787_-UTR3
CAediting_1496878chr22_50623790_-UTR3
CAediting_1496879chr22_50623812_-UTR3
CAediting_1496880chr22_50623816_-UTR3
CAediting_1496881chr22_50623836_-UTR3
CAediting_1496882chr22_50623837_-UTR3
CAediting_1496883chr22_50623842_-UTR3
CAediting_1496884chr22_50623852_-UTR3
CAediting_1496885chr22_50623855_-UTR3
CAediting_1496886chr22_50623861_-UTR3
CAediting_1496887chr22_50623891_-exonic
CAediting_1496888chr22_50623951_-intronic
CAediting_1496889chr22_50623952_-intronic
CAediting_1496890chr22_50623953_-intronic
CAediting_1496891chr22_50623959_-intronic
CAediting_1496892chr22_50623966_-intronic
CAediting_1496893chr22_50623970_-intronic
CAediting_1496894chr22_50623975_-intronic
CAediting_1496895chr22_50623984_-intronic
CAediting_1496896chr22_50623989_-intronic
CAediting_1496897chr22_50623993_-intronic
CAediting_1496898chr22_50624002_-intronic
CAediting_1496899chr22_50624012_-intronic
CAediting_1496900chr22_50624014_-intronic
CAediting_1496901chr22_50624019_-intronic
CAediting_1496902chr22_50624025_-intronic
CAediting_1496903chr22_50624036_-intronic
CAediting_1496904chr22_50624054_-intronic
CAediting_1496905chr22_50624060_-intronic
CAediting_1496906chr22_50624069_-intronic
CAediting_1496907chr22_50624076_-intronic
CAediting_1496908chr22_50624077_-intronic
CAediting_1496909chr22_50624078_-intronic
CAediting_1496910chr22_50624079_-intronic
CAediting_1496911chr22_50624080_-intronic
CAediting_1496912chr22_50624081_-intronic
CAediting_1496913chr22_50624083_-intronic
CAediting_1496914chr22_50624085_-intronic
CAediting_1496915chr22_50624086_-intronic
CAediting_1496916chr22_50624087_-intronic
CAediting_1496917chr22_50624098_-intronic
CAediting_1496918chr22_50624099_-intronic
CAediting_1496919chr22_50624100_-intronic
CAediting_1496920chr22_50624101_-intronic
CAediting_1496921chr22_50624106_-intronic
CAediting_1496922chr22_50624107_-intronic
CAediting_1496923chr22_50624110_-intronic
CAediting_1496924chr22_50624119_-intronic
CAediting_1496925chr22_50624137_-intronic
CAediting_1496926chr22_50624139_-intronic
CAediting_1496927chr22_50624144_-intronic
CAediting_1496928chr22_50624148_-intronic
CAediting_1496929chr22_50624161_-intronic
CAediting_1496930chr22_50624168_-intronic
CAediting_1496931chr22_50624169_-intronic
CAediting_1496932chr22_50624174_-intronic
CAediting_1496933chr22_50624177_-intronic
CAediting_1496934chr22_50624178_-intronic
CAediting_1496935chr22_50624187_-intronic
CAediting_1496936chr22_50624193_-intronic
CAediting_1496937chr22_50624200_-intronic
CAediting_1496938chr22_50624204_-intronic
CAediting_1496939chr22_50624209_-intronic
CAediting_1496940chr22_50624210_-intronic
CAediting_1496941chr22_50624232_-intronic
CAediting_1496942chr22_50624236_-intronic
CAediting_1496943chr22_50624250_-intronic
CAediting_1496944chr22_50624284_-intronic
CAediting_1496945chr22_50624287_-intronic
CAediting_1496946chr22_50624289_-intronic
CAediting_1496947chr22_50624295_-intronic
CAediting_1496948chr22_50624303_-intronic
CAediting_1496949chr22_50624308_-intronic
CAediting_1496950chr22_50624326_-intronic
CAediting_1496951chr22_50624330_-intronic
CAediting_1496952chr22_50624338_-intronic
CAediting_1496953chr22_50624343_-intronic
CAediting_1496954chr22_50624344_-intronic
CAediting_1496955chr22_50624352_-intronic
CAediting_1496956chr22_50624379_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1496821chr22_50623441_-SINEAluAluJr
CAediting_1496822chr22_50623443_-SINEAluAluJr
CAediting_1496823chr22_50623444_-SINEAluAluJr
CAediting_1496824chr22_50623467_-SINEAluAluJr
CAediting_1496825chr22_50623469_-SINEAluAluJr
CAediting_1496826chr22_50623475_-SINEAluAluJr
CAediting_1496827chr22_50623487_-SINEAluAluJr
CAediting_1496828chr22_50623492_-SINEAluAluJr
CAediting_1496829chr22_50623500_-SINEAluAluJr
CAediting_1496830chr22_50623506_-SINEAluAluJr
CAediting_1496831chr22_50623512_-SINEAluAluJr
CAediting_1496832chr22_50623516_-SINEAluAluJr
CAediting_1496833chr22_50623529_-SINEAluAluJr
CAediting_1496834chr22_50623532_-SINEAluAluJr
CAediting_1496835chr22_50623537_-SINEAluAluJr
CAediting_1496836chr22_50623542_-SINEAluAluJr
CAediting_1496837chr22_50623545_-SINEAluAluJr
CAediting_1496838chr22_50623546_-SINEAluAluJr
CAediting_1496839chr22_50623548_-SINEAluAluJr
CAediting_1496840chr22_50623561_-SINEAluAluJr
CAediting_1496841chr22_50623568_-SINEAluAluJr
CAediting_1496842chr22_50623572_-SINEAluAluJr
CAediting_1496843chr22_50623584_-SINEAluAluJr
CAediting_1496844chr22_50623593_-SINEAluAluJr
CAediting_1496845chr22_50623597_-SINEAluAluJr
CAediting_1496846chr22_50623615_-SINEAluAluJr
CAediting_1496847chr22_50623616_-SINEAluAluJr
CAediting_1496848chr22_50623624_-SINEAluAluSx
CAediting_1496849chr22_50623629_-SINEAluAluSx
CAediting_1496850chr22_50623632_-SINEAluAluSx
CAediting_1496851chr22_50623633_-SINEAluAluSx
CAediting_1496852chr22_50623640_-SINEAluAluSx
CAediting_1496853chr22_50623642_-SINEAluAluSx
CAediting_1496854chr22_50623654_-SINEAluAluSx
CAediting_1496855chr22_50623655_-SINEAluAluSx
CAediting_1496856chr22_50623656_-SINEAluAluSx
CAediting_1496857chr22_50623664_-SINEAluAluSx
CAediting_1496858chr22_50623682_-SINEAluAluSx
CAediting_1496859chr22_50623687_-SINEAluAluSx
CAediting_1496860chr22_50623694_-SINEAluAluSx
CAediting_1496861chr22_50623695_-SINEAluAluSx
CAediting_1496862chr22_50623696_-SINEAluAluSx
CAediting_1496863chr22_50623707_-SINEAluAluSx
CAediting_1496864chr22_50623719_-SINEAluAluSx
CAediting_1496865chr22_50623727_-SINEAluAluSx
CAediting_1496866chr22_50623731_-SINEAluAluSx
CAediting_1496867chr22_50623733_-SINEAluAluSx
CAediting_1496868chr22_50623736_-SINEAluAluSx
CAediting_1496869chr22_50623740_-SINEAluAluSx
CAediting_1496870chr22_50623750_-SINEAluAluSx
CAediting_1496871chr22_50623751_-SINEAluAluSx
CAediting_1496872chr22_50623755_-SINEAluAluSx
CAediting_1496873chr22_50623761_-SINEAluAluSx
CAediting_1496874chr22_50623775_-SINEAluAluSx
CAediting_1496875chr22_50623780_-SINEAluAluSx
CAediting_1496876chr22_50623781_-SINEAluAluSx
CAediting_1496877chr22_50623787_-SINEAluAluSx
CAediting_1496878chr22_50623790_-SINEAluAluSx
CAediting_1496879chr22_50623812_-SINEAluAluSx
CAediting_1496880chr22_50623816_-SINEAluAluSx
CAediting_1496881chr22_50623836_-SINEAluAluSx
CAediting_1496882chr22_50623837_-SINEAluAluSx
CAediting_1496883chr22_50623842_-SINEAluAluSx
CAediting_1496884chr22_50623852_-SINEAluAluSx
CAediting_1496885chr22_50623855_-SINEAluAluSx
CAediting_1496886chr22_50623861_-SINEAluAluSx
CAediting_1496887chr22_50623891_-SINEAluAluSx
CAediting_1496888chr22_50623951_-SINEAluAluJr
CAediting_1496889chr22_50623952_-SINEAluAluJr
CAediting_1496890chr22_50623953_-SINEAluAluJr
CAediting_1496891chr22_50623959_-SINEAluAluJr
CAediting_1496892chr22_50623966_-SINEAluAluJr
CAediting_1496893chr22_50623970_-SINEAluAluJr
CAediting_1496894chr22_50623975_-SINEAluAluJr
CAediting_1496895chr22_50623984_-SINEAluAluJr
CAediting_1496896chr22_50623989_-SINEAluAluJr
CAediting_1496897chr22_50623993_-SINEAluAluJr
CAediting_1496898chr22_50624002_-SINEAluAluJr
CAediting_1496899chr22_50624012_-SINEAluAluJr
CAediting_1496900chr22_50624014_-SINEAluAluJr
CAediting_1496901chr22_50624019_-SINEAluAluJr
CAediting_1496902chr22_50624025_-SINEAluAluJr
CAediting_1496903chr22_50624036_-SINEAluAluJr
CAediting_1496904chr22_50624054_-SINEAluAluJr
CAediting_1496905chr22_50624060_-SINEAluAluJr
CAediting_1496907chr22_50624076_-SINEAluAluSp
CAediting_1496908chr22_50624077_-SINEAluAluSp
CAediting_1496909chr22_50624078_-SINEAluAluSp
CAediting_1496910chr22_50624079_-SINEAluAluSp
CAediting_1496911chr22_50624080_-SINEAluAluSp
CAediting_1496912chr22_50624081_-SINEAluAluSp
CAediting_1496913chr22_50624083_-SINEAluAluSp
CAediting_1496914chr22_50624085_-SINEAluAluSp
CAediting_1496915chr22_50624086_-SINEAluAluSp
CAediting_1496916chr22_50624087_-SINEAluAluSp
CAediting_1496917chr22_50624098_-SINEAluAluSp
CAediting_1496918chr22_50624099_-SINEAluAluSp
CAediting_1496919chr22_50624100_-SINEAluAluSp
CAediting_1496920chr22_50624101_-SINEAluAluSp
CAediting_1496921chr22_50624106_-SINEAluAluSp
CAediting_1496922chr22_50624107_-SINEAluAluSp
CAediting_1496923chr22_50624110_-SINEAluAluSp
CAediting_1496924chr22_50624119_-SINEAluAluSp
CAediting_1496925chr22_50624137_-SINEAluAluSp
CAediting_1496926chr22_50624139_-SINEAluAluSp
CAediting_1496927chr22_50624144_-SINEAluAluSp
CAediting_1496928chr22_50624148_-SINEAluAluSp
CAediting_1496929chr22_50624161_-SINEAluAluSp
CAediting_1496930chr22_50624168_-SINEAluAluSp
CAediting_1496931chr22_50624169_-SINEAluAluSp
CAediting_1496932chr22_50624174_-SINEAluAluSp
CAediting_1496933chr22_50624177_-SINEAluAluSp
CAediting_1496934chr22_50624178_-SINEAluAluSp
CAediting_1496935chr22_50624187_-SINEAluAluSp
CAediting_1496936chr22_50624193_-SINEAluAluSp
CAediting_1496937chr22_50624200_-SINEAluAluSp
CAediting_1496938chr22_50624204_-SINEAluAluSp
CAediting_1496939chr22_50624209_-SINEAluAluSp
CAediting_1496940chr22_50624210_-SINEAluAluSp
CAediting_1496941chr22_50624232_-SINEAluAluSp
CAediting_1496942chr22_50624236_-SINEAluAluSp
CAediting_1496943chr22_50624250_-SINEAluAluSp
CAediting_1496944chr22_50624284_-SINEAluAluSp
CAediting_1496945chr22_50624287_-SINEAluAluSp
CAediting_1496946chr22_50624289_-SINEAluAluSp
CAediting_1496947chr22_50624295_-SINEAluAluSp
CAediting_1496948chr22_50624303_-SINEAluAluSp
CAediting_1496949chr22_50624308_-SINEAluAluSp
CAediting_1496950chr22_50624326_-SINEAluAluSp
CAediting_1496951chr22_50624330_-SINEAluAluSp
CAediting_1496952chr22_50624338_-SINEAluAluSp
CAediting_1496953chr22_50624343_-SINEAluAluSp
CAediting_1496954chr22_50624344_-SINEAluAluSp
CAediting_1496955chr22_50624352_-SINEAluAluSp
CAediting_1496956chr22_50624379_-LINEL2L2

Top

RNA A-to-I editing events in the alternative splicing sites for ARSA

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000100299.16.ARSA.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000100299.16.ARSA.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for ARSA

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
BRCA.CAediting_1496867.ENSG00000100299.ARSA.png
Soverview
KIRC.CAediting_1496844.ENSG00000100299.ARSA.png
Soverview
KIRC.CAediting_1496885.ENSG00000100299.ARSA.png
Soverview
KIRP.CAediting_1496867.ENSG00000100299.ARSA.png
Soverview
LUAD.CAediting_1496885.ENSG00000100299.ARSA.png
Soverview
PRAD.CAediting_1496867.ENSG00000100299.ARSA.png
Soverview
PRAD.CAediting_1496878.ENSG00000100299.ARSA.png
Soverview

Top

Protein coding region RNA A-to-I editings for ARSA

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for ARSA

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1496877chr22_50623787_-ENSG00000100299.16ENST00000608497hsa-miR-4691-3p50623783506237897mer-m85062378250623809150.00-26.36
CAediting_1496878chr22_50623790_-ENSG00000100299.16ENST00000608497hsa-miR-444150623790506237967mer-m85062378950623805145.00-17.91
CAediting_1496878chr22_50623790_-ENSG00000100299.16ENST00000608497hsa-miR-6753-5p50623787506237948mer-1a5062378750623812152.00-22.96
CAediting_1496878chr22_50623790_-ENSG00000100299.16ENST00000608497hsa-miR-7113-5p50623789506237957mer-m85062378850623808151.00-19.97
CAediting_1496879chr22_50623812_-ENSG00000100299.16ENST00000608497hsa-miR-331-3p50623812506238187mer-m85062381150623831144.00-21.89
CAediting_1496879chr22_50623812_-ENSG00000100299.16ENST00000608497hsa-miR-589-5p50623807506238137mer-m85062380650623827144.00-17.27
CAediting_1496881chr22_50623836_-ENSG00000100299.16ENST00000608497hsa-miR-17-3p50623836506238427mer-m85062383550623856155.00-18.02
CAediting_1496881chr22_50623836_-ENSG00000100299.16ENST00000608497hsa-miR-485-5p50623832506238387mer-m85062383150623851153.00-18.11
CAediting_1496881chr22_50623836_-ENSG00000100299.16ENST00000608497hsa-miR-6884-5p50623832506238387mer-m85062383150623856148.00-21.26
CAediting_1496884chr22_50623852_-ENSG00000100299.16ENST00000608497hsa-miR-139-3p50623847506238526mer5062384650623866152.00-24.20
CAediting_1496875chr22_50623780_-ENSG00000100299.16ENST00000608497hsa-miR-766-3p50623780506237867mer-m85062377950623800140.00-13.28
CAediting_1496876chr22_50623781_-ENSG00000100299.16ENST00000608497hsa-miR-454050623777506237826mer5062377650623797144.00-16.79
CAediting_1496876chr22_50623781_-ENSG00000100299.16ENST00000608497hsa-miR-5588-3p50623777506237848mer-1a5062377750623796149.00-13.79
CAediting_1496876chr22_50623781_-ENSG00000100299.16ENST00000608497hsa-miR-797750623780506237867mer-m85062377950623796142.00-12.24
CAediting_1496880chr22_50623816_-ENSG00000100299.16ENST00000608497hsa-miR-10398-3p50623814506238196mer5062381350623832145.00-29.81
CAediting_1496880chr22_50623816_-ENSG00000100299.16ENST00000608497hsa-miR-6763-3p50623812506238187mer-m85062381150623831146.00-20.15

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1496874chr22_50623775_-ENSG00000100299.16ENST00000608497hsa-miR-20b-3p50623774506237807mer-m85062377450623795152-15.1
CAediting_1496878chr22_50623790_-ENSG00000100299.16ENST00000608497hsa-miR-3162-5p50623790506237967mer-m85062378950623811153-25.73
CAediting_1496883chr22_50623842_-ENSG00000100299.16ENST00000608497hsa-miR-317450623840506238456mer5062383950623860142-20.62
CAediting_1496881chr22_50623836_-ENSG00000100299.16ENST00000608497hsa-miR-377-5p50623832506238387mer-m85062383150623852155-17.24
CAediting_1496882chr22_50623837_-ENSG00000100299.16ENST00000608497hsa-miR-377-5p50623832506238387mer-m85062383150623852155-17.24
CAediting_1496880chr22_50623816_-ENSG00000100299.16ENST00000608497hsa-miR-430850623812506238198mer-1a5062381250623829144-19.07
CAediting_1496877chr22_50623787_-ENSG00000100299.16ENST00000608497hsa-miR-569050623783506237897mer-m85062378250623802150-16.63
CAediting_1496881chr22_50623836_-ENSG00000100299.16ENST00000608497hsa-miR-608650623832506238387mer-m85062383150623850150-23.99
CAediting_1496882chr22_50623837_-ENSG00000100299.16ENST00000608497hsa-miR-608650623832506238387mer-m85062383150623850150-23.99
CAediting_1496881chr22_50623836_-ENSG00000100299.16ENST00000608497hsa-miR-6516-5p50623836506238427mer-m85062383550623857149-15.01
CAediting_1496882chr22_50623837_-ENSG00000100299.16ENST00000608497hsa-miR-6516-5p50623836506238427mer-m85062383550623857149-15.01

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_580943chr7_100356700_+ENSG00000100299.16ENST00000608497hsa-miR-6840-3p50623821506238277mer-m85062382050623836141-27.37
CAediting_1351755chr19_40282625_-ENSG00000100299.16ENST00000608497hsa-miR-64150622812506228176mer5062281150622836140-18.31
CAediting_442554chr5_154685830_+ENSG00000100299.16ENST00000608497hsa-miR-130350622978506229847mer-m85062297750622999146-18.32

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ARSA

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for ARSA

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BLCACAediting_1496843chr22_50623584_-..0.02412844206436820.309490214429464..
BRCACAediting_1496843chr22_50623584_-0.04330569904233650.167494762066825....
BRCACAediting_1496844chr22_50623593_-0.001631243253439440.275732865850979....
PRADCAediting_1496844chr22_50623593_-0.02107501060974790.235188577423874....
THCACAediting_1496844chr22_50623593_-5.94491847011243e-070.377122011619511....
SKCMCAediting_1496844chr22_50623593_-0.0006657143071541480.389215922898747....
BLCACAediting_1496845chr22_50623597_-..0.0221446932144560.247937842190353..
LGGCAediting_1496845chr22_50623597_-0.004306229452733130.22050853634103....
BRCACAediting_1496845chr22_50623597_-0.000417296081956430.217279438683221....
LUADCAediting_1496845chr22_50623597_-0.03472326353288730.254648472547103....
HNSCCAediting_1496845chr22_50623597_-0.01446573875819520.32235606296531....
THCACAediting_1496845chr22_50623597_-0.0008944441062335970.22864336982496....
KIRCCAediting_1496845chr22_50623597_-0.001974340068166690.275255090057568....
UCECCAediting_1496845chr22_50623597_-5.58434176567344e-050.478296130007537....
PCPGCAediting_1496845chr22_50623597_-2.26686178708584e-050.483191941134914....
SKCMCAediting_1496845chr22_50623597_-0.0003767601946848410.323333779014342....
THYMCAediting_1496845chr22_50623597_-0.00181499113939420.430287762846774....
THCACAediting_1496867chr22_50623733_-....0.00288697176688520.28279737013481
BRCACAediting_1496877chr22_50623787_-0.001720659860058950.24668600065402....
SKCMCAediting_1496877chr22_50623787_-..0.02415176514913450.19189148219264..
BLCACAediting_1496878chr22_50623790_-..0.03303069394342050.260812292322076..
HNSCCAediting_1496878chr22_50623790_-0.001724968891281120.396221973251721....
UCECCAediting_1496878chr22_50623790_-0.01668034128233840.2181566644039510.04461172249803670.183691186296727..
BRCACAediting_1496881chr22_50623836_-0.01631482681747340.325503832837829....
THCACAediting_1496881chr22_50623836_-....0.02913846564752430.23537727675218
BRCACAediting_1496884chr22_50623852_-0.007152875700886090.312274454488972....
SKCMCAediting_1496884chr22_50623852_-..0.01835845157559890.317025336156399..
BLCACAediting_1496888chr22_50623951_-0.02248142572033130.1934824073067060.009850580470005510.218245360550812..
BRCACAediting_1496888chr22_50623951_-0.003340246913909850.160613623337608....
GBMCAediting_1496888chr22_50623951_-0.01799522821597160.256094877595246....
HNSCCAediting_1496888chr22_50623951_-0.002412596691235240.287758038980481....
THCACAediting_1496888chr22_50623951_-0.02979698600721210.125264390236263....
KIRCCAediting_1496888chr22_50623951_-0.0224081354797620.171570124973063....
PAADCAediting_1496888chr22_50623951_-0.02453793480204690.292565016851709....
SKCMCAediting_1496888chr22_50623951_-0.01633051543833240.177325735700646....
SARCCAediting_1496888chr22_50623951_-0.004251521039413610.37966240746876..0.03137969226874770.290586152060898
BLCACAediting_1496906chr22_50624069_-0.003590532405024980.256599555067994....
LGGCAediting_1496906chr22_50624069_-0.009629100543585150.153657541200067....
BRCACAediting_1496906chr22_50624069_-0.01077120105833350.123875629496221....
LUSCCAediting_1496906chr22_50624069_-0.02934139375013040.198167214644278..0.0003660013032540660.318766174271529
PRADCAediting_1496906chr22_50624069_-0.01435733316644510.155614249488375....
HNSCCAediting_1496906chr22_50624069_-0.01277777957343720.246978000006672....
STADCAediting_1496906chr22_50624069_-0.0003767528102586110.353873507490107....
THCACAediting_1496906chr22_50624069_-0.01484216225605270.144187302363175....
KIRCCAediting_1496906chr22_50624069_-0.0004787260384891430.26424451543664....
UCECCAediting_1496906chr22_50624069_-..0.04666692401433820.197460809082162..
SKCMCAediting_1496906chr22_50624069_-0.01813608722115260.169944972015268....
BLCACAediting_1496930chr22_50624168_-0.01424818365649860.212900624641777....
LUSCCAediting_1496930chr22_50624168_-..0.02339471117558170.190177544957498..
PRADCAediting_1496930chr22_50624168_-0.01369006541688040.145382250210236....
THYMCAediting_1496930chr22_50624168_-0.04565192611335980.218694403078039..0.0006200906923630340.365888225433631
LGGCAediting_1496937chr22_50624200_-0.01256735095112740.286922063700266....
SKCMCAediting_1496937chr22_50624200_-..0.02427970147077920.265345747519275..
BRCACAediting_1496938chr22_50624204_-0.0313765206823810.209207856442465....
LUADCAediting_1496939chr22_50624209_-0.02802473338528340.2014501010859880.0424023454526970.186382240933831..
HNSCCAediting_1496939chr22_50624209_-0.01719045106373670.234346329250837....
SKCMCAediting_1496939chr22_50624209_-..0.04368627675835810.15011835142863..
BRCACAediting_1496940chr22_50624210_-0.01122202757016960.196964291596809....
LUADCAediting_1496940chr22_50624210_-0.008458258026163570.271571928436399....
LUSCCAediting_1496940chr22_50624210_-..0.0474325962346920.197766649133247..
THCACAediting_1496940chr22_50624210_-0.04903539654749180.122672465507443....
UCECCAediting_1496940chr22_50624210_-....0.03540633917749910.257500122680592
THYMCAediting_1496940chr22_50624210_-0.03403801291133840.243500288840609....
PRADCAediting_1496953chr22_50624343_-..0.02042398257881370.298726872166198..
BRCACAediting_1496955chr22_50624352_-0.004741528437986260.205684141328184....
LUADCAediting_1496955chr22_50624352_-0.04607048317304350.220944405459943....
THCACAediting_1496955chr22_50624352_-0.001632625665129610.220812979760597....
KIRCCAediting_1496955chr22_50624352_-0.00146360142849260.339815352735906....
SKCMCAediting_1496955chr22_50624352_-6.6069243329402e-050.35738114986722....

Top

Relation with cancer stages for ARSA

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_1496845chr22_50623597_-0.0440506710234950.126461101225371
BRCApathologic_stageCAediting_1496867chr22_50623733_-0.03691231512384540.233740176426406
HNSCclinical_stageCAediting_1496939chr22_50624209_-0.0228866851951369-0.22406989843069
KIRCpathologic_stageCAediting_1496953chr22_50624343_-0.0138862963649357-0.316069862723857
SKCMpathologic_stageCAediting_1496937chr22_50624200_-0.01615223640686540.314633924216839
THCApathologic_stageCAediting_1496845chr22_50623597_-0.04489070515454270.139566312210615
THCApathologic_stageCAediting_1496888chr22_50623951_-0.04547388086420710.115772803131408
THCApathologic_stageCAediting_1496930chr22_50624168_-0.007008557057665680.139030714182208

Top

Relation with survival for ARSA

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
BLCACAediting_1496955chr22_50624352_-0.006351222663385950.018319542.2777
BRCACAediting_1496906chr22_50624069_-0.01930486619276870.04115090.00332674
BRCACAediting_1496939chr22_50624209_-0.01794017607552470.02688420.0549679
STADCAediting_1496906chr22_50624069_-0.0002021312167213020.01750710.00488651
SKCMCAediting_1496953chr22_50624343_-0.007637684397432730.049425444.6286

Top

RelatedDrugs for ARSA

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for ARSA

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
ARSAC0023522Leukodystrophy, Metachromatic44CTD_human;GENOMICS_ENGLAND;UNIPROT
ARSAC0001973Alcoholic Intoxication, Chronic4PSYGENET
ARSAC0041696Unipolar Depression1PSYGENET
ARSAC1269683Major Depressive Disorder1PSYGENET
ARSAC2713319Arylsulfatase A Deficiency1CTD_human;GENOMICS_ENGLAND